BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037681
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 135/219 (61%), Gaps = 3/219 (1%)
Query: 59 ELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQ-ELK 117
+L FS + A++NFS+ N LG GGFG VYKG LA G +AVKRL QG + + +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-RVLLELGTRLQ 176
E +I+ H+NL+RL G C+ E+LL+Y Y+ N S+ L + + + L+ R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
I G GL YLH H +IIHRD+KA+NILLD+E + + DFG+A++ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
V GT G+I PEY+ G S K+DVF +G++LLE+++G++
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 133/219 (60%), Gaps = 3/219 (1%)
Query: 59 ELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQ-ELK 117
+L FS + A++NF + N LG GGFG VYKG LA G +AVKRL QG + + +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-RVLLELGTRLQ 176
E +I+ H+NL+RL G C+ E+LL+Y Y+ N S+ L + + + L+ R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
I G GL YLH H +IIHRD+KA+NILLD+E + + DFG+A++ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
V G G+I PEY+ G S K+DVF +G++LLE+++G++
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 127/207 (61%), Gaps = 8/207 (3%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
ATNNF +G G FG VYKGVL G ++A+KR + S QG++E + E ++ +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVL-LELGTRLQIIEGIVEGLLYLH 189
LV L+G C ER+E +LIY+Y+ N +L L+ + + + RL+I G GL YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN--TNRVAGTFGYIPPE 247
+ IIHRD+K+ NILLD+ PKI+DFG+++ KG E V GT GYI PE
Sbjct: 157 TRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYIDPE 211
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
Y +G + KSDV+SFG++L E+L +
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 127/207 (61%), Gaps = 8/207 (3%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
ATNNF +G G FG VYKGVL G ++A+KR + S QG++E + E ++ +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVL-LELGTRLQIIEGIVEGLLYLH 189
LV L+G C ER+E +LIY+Y+ N +L L+ + + + RL+I G GL YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN--TNRVAGTFGYIPPE 247
+ IIHRD+K+ NILLD+ PKI+DFG+++ KG E V GT GYI PE
Sbjct: 157 TRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDPE 211
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
Y +G + KSDV+SFG++L E+L +
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 19/223 (8%)
Query: 63 FSFSSVAAATNNFSDT------NKLGEGGFGPVYKGVLAKGDEIAVKRLS----VRSRQG 112
FSF + TNNF + NK+GEGGFG VYKG + +AVK+L+ + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 113 LQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL--DFFLFDATKRVLLE 170
Q+ E V+AK QH+NLV LLG + D+ L+Y Y+PN SL D T L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 131
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
R +I +G G+ +LH + IHRD+K++NILLD+ KISDFG+AR +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+R+ GT Y+ PE + +G + KSD++SFG++LLEI++G
Sbjct: 189 TVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 128/223 (57%), Gaps = 19/223 (8%)
Query: 63 FSFSSVAAATNNFSDT------NKLGEGGFGPVYKGVLAKGDEIAVKRLS----VRSRQG 112
FSF + TNNF + NK+GEGGFG VYKG + +AVK+L+ + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 113 LQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL--DFFLFDATKRVLLE 170
Q+ E V+AK QH+NLV LLG + D+ L+Y Y+PN SL D T L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 131
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
R +I +G G+ +LH + IHRD+K++NILLD+ KISDFG+AR +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
R+ GT Y+ PE + +G + KSD++SFG++LLEI++G
Sbjct: 189 TVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 128/223 (57%), Gaps = 19/223 (8%)
Query: 63 FSFSSVAAATNNFSDT------NKLGEGGFGPVYKGVLAKGDEIAVKRLS----VRSRQG 112
FSF + TNNF + NK+GEGGFG VYKG + +AVK+L+ + + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 113 LQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL--DFFLFDATKRVLLE 170
Q+ E V+AK QH+NLV LLG + D+ L+Y Y+PN SL D T L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 125
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
R +I +G G+ +LH + IHRD+K++NILLD+ KISDFG+AR +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
R+ GT Y+ PE + +G + KSD++SFG++LLEI++G
Sbjct: 183 XVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 125/223 (56%), Gaps = 19/223 (8%)
Query: 63 FSFSSVAAATNNFSD------TNKLGEGGFGPVYKGVLAKGDEIAVKRLS----VRSRQG 112
FSF + TNNF + NK GEGGFG VYKG + +AVK+L+ + + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 113 LQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL--DFFLFDATKRVLLE 170
Q+ E V AK QH+NLV LLG + D+ L+Y Y PN SL D T L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LS 122
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
R +I +G G+ +LH + IHRD+K++NILLD+ KISDFG+AR +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+R+ GT Y PE + +G + KSD++SFG++LLEI++G
Sbjct: 180 XVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITG 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 104/196 (53%), Gaps = 12/196 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + +Q EA ++ +QH LVRL
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ +I EY+ SL DF D +VLL + I EG+ Y+ R IH
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+N+L+ + + KI+DFG+AR+ + NE T R F + PE + G +I
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCFTI 190
Query: 257 KSDVFSFGMLLLEILS 272
KSDV+SFG+LL EI++
Sbjct: 191 KSDVWSFGILLYEIVT 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 123/246 (50%), Gaps = 33/246 (13%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
+G GGFG VY+ GDE+AVK Q ++ ++ EA + A ++H N++ L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
C++ L+ E+ L+ L + KR+ ++ + I G+ YLH + V I
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAV--QIARGMNYLHDEAIVPI 129
Query: 197 IHRDLKASNILLDKEMKP--------KISDFGMARIFKGNESKANTNRVAGTFGYIPPEY 248
IHRDLK+SNIL+ ++++ KI+DFG+AR + + AG + ++ PE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH----RTTKMSAAGAYAWMAPEV 185
Query: 249 VYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLAR 308
+ + S SDV+S+G+LL E+L TG + G D VA + + + LA
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELL----------TGEVPFRGIDGLAVAYGVAM--NKLAL 233
Query: 309 PFRQYC 314
P C
Sbjct: 234 PIPSTC 239
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 12/196 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG G FG V+ G ++AVK L + +Q EA ++ +QH LVRL
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ + +I E++ SL DF D +VLL + I EG+ Y+ R IH
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+N+L+ + + KI+DFG+AR+ + NE T R F + PE + G +I
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCFTI 189
Query: 257 KSDVFSFGMLLLEILS 272
KS+V+SFG+LL EI++
Sbjct: 190 KSNVWSFGILLYEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 78
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 79 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 134
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 191
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 192 SDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 190
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 79
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 80 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 135
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 192
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 193 SDVWSFGILLTEIVT 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 83
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 84 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 196
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 86
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 87 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 142
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 199
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 200 SDVWSFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 85
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 86 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 141
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 198
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 199 SDVWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 77
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTA---REGAKFPIKWTAPEAINYGTFTIK 190
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTA---REGAKFPIKWTAPEAINYGTFTIK 190
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 84 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 139
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTA---REGAKFPIKWTAPEAINYGTFTIK 196
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 83 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 138
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTA---REGAKFPIKWTAPEAINYGTFTIK 195
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 196 SDVWSFGILLTEIVT 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 72
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 73 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 128
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTA---REGAKFPIKWTAPEAINYGTFTIK 185
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 186 SDVWSFGILLTEIVT 200
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 87
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 88 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 143
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTA---REGAKFPIKWTAPEAINYGTFTIK 200
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 201 SDVWSFGILLTEIVT 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
++G G FG V+ G D++A+K + R+G ++ EA V+ K+ H LV+L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C+E+ L++E++ + L +L T+R L T L + + EG+ YL S
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS--- 123
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
+IHRDL A N L+ + K+SDFGM R ++ ++T + PE S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYS 182
Query: 256 IKSDVFSFGMLLLEILSGKK 275
KSDV+SFG+L+ E+ S K
Sbjct: 183 SKSDVWSFGVLMWEVFSEGK 202
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 80 KLGEGGFGPVY----KGVLAKGDE--IAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LGEG FG V+ +L + D+ +AVK L S Q+ + EA ++ +QH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVL----------LELGTRLQIIEGI 181
G C E L+++EY+ + L+ FL ++L L LG L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
G++YL + + +HRDL N L+ + + KI DFGM+R + R
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEF 279
++PPE + + +SDV+SFG++L EI + K +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 80 KLGEGGFGPVY----KGVLAKGDE--IAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LGEG FG V+ +L + D+ +AVK L S Q+ + EA ++ +QH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVL----------LELGTRLQIIEGI 181
G C E L+++EY+ + L+ FL ++L L LG L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
G++YL + + +HRDL N L+ + + KI DFGM+R + R
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEF 279
++PPE + + +SDV+SFG++L EI + K +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 21/218 (9%)
Query: 80 KLGEGGFGPVY----KGVLAKGDE--IAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LGEG FG V+ +L + D+ +AVK L S Q+ + EA ++ +QH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVL----------LELGTRLQIIEGI 181
G C E L+++EY+ + L+ FL ++L L LG L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
G++YL + + +HRDL N L+ + + KI DFGM+R + R
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEF 279
++PPE + + +SDV+SFG++L EI + K +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 131/267 (49%), Gaps = 18/267 (6%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEA 120
L S SV ++ K+G+G G VY + +A G E+A+++++++ + + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
LV+ + ++ N+V L + DE ++ EYL SL D ++ G +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++ L +LH + ++IHRD+K+ NILL + K++DFG +SK +T + GT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK---NTEFYHTGYL-SINGYDQTQVA 296
++ PE V + K D++S G++ +E++ G+ N YL + NG + Q
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 297 SKIKLVESCLARPFRQYCCILKVRTFG 323
K+ S + R F C + V G
Sbjct: 240 EKL----SAIFRDFLNRCLDMDVEKRG 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
++G G FG V+ G D++A+K + R+G ++ EA V+ K+ H LV+L
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C+E+ L++E++ + L +L T+R L T L + + EG+ YL
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 121
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
+IHRDL A N L+ + K+SDFGM R ++ ++T + PE S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYS 180
Query: 256 IKSDVFSFGMLLLEILSGKK 275
KSDV+SFG+L+ E+ S K
Sbjct: 181 SKSDVWSFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
++G G FG V+ G D++A+K + R+G ++ EA V+ K+ H LV+L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C+E+ L++E++ + L +L T+R L T L + + EG+ YL
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 123
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
+IHRDL A N L+ + K+SDFGM R ++ ++T + PE S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYS 182
Query: 256 IKSDVFSFGMLLLEILSGKK 275
KSDV+SFG+L+ E+ S K
Sbjct: 183 SKSDVWSFGVLMWEVFSEGK 202
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 73
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 74 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 129
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
+L+A+NIL+ + KI+DFG+AR+ + NE A R F + PE + G +IK
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTA---REGAKFPIKWTAPEAINYGTFTIK 186
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
++G G FG V+ G D++A+K + R+G ++ EA V+ K+ H LV+L
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C+E+ L++E++ + L +L T+R L T L + + EG+ YL
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 126
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
+IHRDL A N L+ + K+SDFGM R ++ ++T + PE S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYS 185
Query: 256 IKSDVFSFGMLLLEILSGKK 275
KSDV+SFG+L+ E+ S K
Sbjct: 186 SKSDVWSFGVLMWEVFSEGK 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDA-----TKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
C ++ EY+P +L +L + T VLL + T+ I + YL
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQ------ISSAMEYL---E 147
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 206
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 207 TFSIKSDVWAFGVLLWEIAT 226
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG+AR+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE A R F + PE G +IK
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA---RQGAKFPIKWTAPEAALYGRFTIK 361
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL E+ +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE A R F + PE G +IK
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA---RQGAKFPIKWTAPEAALYGRFTIK 361
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL E+ +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRS--RQGLQELKNEALVIAKVQHKNLVRLLGC 137
K+G G FG V++ G ++AVK L + + + E E ++ +++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
+ ++ EYL SL L + R L+ RL + + +G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 198 HRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN----TNRVAGTFGYIPPEYVYQGI 253
HRDLK+ N+L+DK+ K+ DFG++R+ KA+ + AGT ++ PE +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL------KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 254 CSIKSDVFSFGMLLLEILS 272
+ KSDV+SFG++L E+ +
Sbjct: 216 SNEKSDVYSFGVILWELAT 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 16 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 74 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 126
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 41 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 99 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 151
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 244
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 129
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 222
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRS--RQGLQELKNEALVIAKVQHKNLVRLLGC 137
K+G G FG V++ G ++AVK L + + + E E ++ +++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
+ ++ EYL SL L + R L+ RL + + +G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 198 HRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT----NRVAGTFGYIPPEYVYQGI 253
HR+LK+ N+L+DK+ K+ DFG++R+ KA+T AGT ++ PE +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 254 CSIKSDVFSFGMLLLEILS 272
+ KSDV+SFG++L E+ +
Sbjct: 216 SNEKSDVYSFGVILWELAT 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 20/219 (9%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 18 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ + ++ ++ SL L + + E+ + I G+ YLH S I
Sbjct: 76 YST-KPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QGI 253
IHRDLK++NI L ++ KI DFG+A + +++G+ ++ PE +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 254 CSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 221
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 72
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +IK
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 258 SDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
SDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 186 SDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 152
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 245
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLY-AVV 331
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE A R F + PE G +IK
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTA---RQGAKFPIKWTAPEAALYGRFTIK 444
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL E+ +
Sbjct: 445 SDVWSFGILLTELTT 459
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEA 120
L S SV ++ K+G+G G VY + +A G E+A+++++++ + + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
LV+ + ++ N+V L + DE ++ EYL SL D ++ G +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++ L +LH + ++IHRD+K+ NILL + K++DFG +SK + + GT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGT 179
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK---NTEFYHTGYL-SINGYDQTQVA 296
++ PE V + K D++S G++ +E++ G+ N YL + NG + Q
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 297 SKIKLVESCLARPFRQYCCILKVRTFG 323
K+ S + R F C + V G
Sbjct: 240 EKL----SAIFRDFLNRCLDMDVEKRG 262
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 124
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 129
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 222
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE A R F + PE G +IK
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTA---RQGAKFPIKWTAPEAALYGRFTIK 361
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL E+ +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 148
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 149 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 201
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 78 TNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
++G G FG V+ G D++A+K + S + EA V+ K+ H LV+L G
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
C+E+ L++E++ + L +L T+R L T L + + EG+ YL +I
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVI 145
Query: 198 HRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIK 257
HRDL A N L+ + K+SDFGM R ++ ++T + PE S K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSK 204
Query: 258 SDVFSFGMLLLEILSGKK 275
SDV+SFG+L+ E+ S K
Sbjct: 205 SDVWSFGVLMWEVFSEGK 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 131
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 132 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 184
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
++G G FG V+ G D++A+K + R+G ++ EA V+ K+ H LV+L
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C+E+ L+ E++ + L +L T+R L T L + + EG+ YL
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 124
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
+IHRDL A N L+ + K+SDFGM R ++ ++T + PE S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYS 183
Query: 256 IKSDVFSFGMLLLEILSGKK 275
KSDV+SFG+L+ E+ S K
Sbjct: 184 SKSDVWSFGVLMWEVFSEGK 203
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 75
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +IK
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 258 SDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
SDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 189 SDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 233
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG G FG V+ K ++AVK + S ++ EA V+ +QH LV+L +
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL-HAVV 79
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFD-ATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
++ +I E++ SL DF D +K+ L +L + I EG+ ++ + I
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRN---YI 133
Query: 198 HRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICS 255
HRDL+A+NIL+ + KI+DFG+AR+ + NE T R F + PE + G +
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSFT 190
Query: 256 IKSDVFSFGMLLLEILS 272
IKSDV+SFG+LL+EI++
Sbjct: 191 IKSDVWSFGILLMEIVT 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEA 120
L S SV ++ K+G+G G VY + +A G E+A+++++++ + + + NE
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
LV+ + ++ N+V L + DE ++ EYL SL D ++ G +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++ L +LH + ++IHRD+K+ NILL + K++DFG +SK + + GT
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGT 180
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK---NTEFYHTGYL-SINGYDQTQVA 296
++ PE V + K D++S G++ +E++ G+ N YL + NG + Q
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 240
Query: 297 SKIKLVESCLARPFRQYCCILKVRTFG 323
K+ S + R F C + V G
Sbjct: 241 EKL----SAIFRDFLNRCLEMDVEKRG 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 102
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 158
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 159 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 211
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQG---LQELKNEALVIAKVQHKN 130
FSD ++G G FG VY + E+ A+K++S +Q Q++ E + K++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++ GC + L+ EY + D L + K+ L E+ + G ++GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEI-AAVTHGALQGLAYLHS 172
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H+ +IHRD+KA NILL + K+ DFG A I A N GT ++ PE +
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 251 ---QGICSIKSDVFSFGMLLLEILSGK 274
+G K DV+S G+ +E+ K
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG G FG V+ K ++AVK + S ++ EA V+ +QH LV+L +
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL-HAVV 252
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFD-ATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
++ +I E++ SL DF D +K+ L +L + I EG+ ++ + I
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRN---YI 306
Query: 198 HRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICS 255
HRDL+A+NIL+ + KI+DFG+AR+ + NE T R F + PE + G +
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGSFT 363
Query: 256 IKSDVFSFGMLLLEILS 272
IKSDV+SFG+LL+EI++
Sbjct: 364 IKSDVWSFGILLMEIVT 380
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQG---LQELKNEALVIAKVQHKN 130
FSD ++G G FG VY + E+ A+K++S +Q Q++ E + K++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++ GC + L+ EY + D L + K+ L E+ + G ++GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEI-AAVTHGALQGLAYLHS 133
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H+ +IHRD+KA NILL + K+ DFG A I A N GT ++ PE +
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184
Query: 251 ---QGICSIKSDVFSFGMLLLEILSGK 274
+G K DV+S G+ +E+ K
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V+ G ++A+K L + + EA ++ K++H LV+L +
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLY-AVV 73
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL D R L +L + + + G+ Y+ R+ IHR
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRAL-KLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+++NIL+ + KI+DFG+AR+ + NE T R F + PE G +IK
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL E+++
Sbjct: 187 SDVWSFGILLTELVT 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEA 120
L S SV ++ K+G+G G VY + +A G E+A+++++++ + + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
LV+ + ++ N+V L + DE ++ EYL SL D ++ G +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++ L +LH + ++IHRD+K+ NILL + K++DFG +SK + + GT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGT 179
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK---NTEFYHTGYL-SINGYDQTQVA 296
++ PE V + K D++S G++ +E++ G+ N YL + NG + Q
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 297 SKIKLVESCLARPFRQYCCILKVRTFG 323
K+ S + R F C + V G
Sbjct: 240 EKL----SAIFRDFLNRCLEMDVEKRG 262
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 20/219 (9%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ ++ ++ SL L + E+ + I +G+ YLH S I
Sbjct: 72 YSTA-PQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QGI 253
IHRDLK++NI L +++ KI DFG+A + +++G+ ++ PE + +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 254 CSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 217
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ EY+ N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG+ R+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G FG VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYLE--- 126
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN 185
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +IK
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEW---TARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 258 SDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
SDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 193 SDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDE-----IAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRL 134
LG G FG VYKG+ E +A+K L+ + E +EAL++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
LG C+ +L + + +P+ L ++ + + +L L I +G++YL
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQL--LLNWCVQIAKGMMYL---EER 136
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
R++HRDL A N+L+ KI+DFG+AR+ +G+E + N + ++ E ++
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 255 SIKSDVFSFGMLLLEILS 272
+ +SDV+S+G+ + E+++
Sbjct: 197 THQSDVWSYGVTIWELMT 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
+ ++ EY+ SL FL T + L L + + I G+ Y+ R+ +HR
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +IK
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 258 SDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
SDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 193 SDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 237
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
E ++I EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 34 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 92 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 144
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A +++G+ ++ PE + +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 237
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN 192
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDE-----IAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRL 134
LG G FG VYKG+ E +A+K L+ + E +EAL++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
LG C+ +L + + +P+ L ++ + + +L L I +G++YL
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQL--LLNWCVQIAKGMMYL---EER 159
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
R++HRDL A N+L+ KI+DFG+AR+ +G+E + N + ++ E ++
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 255 SIKSDVFSFGMLLLEILS 272
+ +SDV+S+G+ + E+++
Sbjct: 220 THQSDVWSYGVTIWELMT 237
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 71
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 126
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 183
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 184 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 126
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN 185
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 18/262 (6%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAK 125
SV ++ K+G+G G VY + +A G E+A+++++++ + + + NE LV+ +
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++ N+V L + DE ++ EYL SL D ++ G + ++ L
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQAL 130
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+LH + ++IHR++K+ NILL + K++DFG +SK +T + GT ++
Sbjct: 131 EFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMA 185
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKK---NTEFYHTGYL-SINGYDQTQVASKIKL 301
PE V + K D++S G++ +E++ G+ N YL + NG + Q K+
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL-- 243
Query: 302 VESCLARPFRQYCCILKVRTFG 323
S + R F C + V G
Sbjct: 244 --SAIFRDFLNRCLEMDVEKRG 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 152
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A +++G+ ++ PE + +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 245
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 128
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 187
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 129
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYN 188
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 192
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 141
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 200
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 201 KFSIKSDVWAFGVLLWEIAT 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 73
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 128
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 185
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 186 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 231
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
E ++I EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 192
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 128
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 187
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 132
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 191
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 192 KFSIKSDVWAFGVLLWEIAT 211
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 130
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 189
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 117/220 (53%), Gaps = 22/220 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 137 CCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ + ++ ++ SL L TK +++L + I +G+ YLH S
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS--- 124
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QG 252
IIHRDLK++NI L +++ KI DFG+A +++G+ ++ PE + +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 192
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 130
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 189
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 128
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 187
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 128
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 187
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G G V+ G ++AVK L + EA ++ ++QH+ LVRL +
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 77
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N SL FL + L + L + I EG+ ++ + IHR
Sbjct: 78 TQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHR 133
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL+A+NIL+ + KI+DFG+AR+ + E A R F + PE + G +IK
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTA---REGAKFPIKWTAPEAINYGTFTIK 190
Query: 258 SDVFSFGMLLLEILS 272
SDV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYLE--- 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 192
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 128
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 187
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ + ++ ++ SL L + + E+ + I G+ YLH S I
Sbjct: 88 YST-KPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QGI 253
IHRDLK++NI L ++ KI DFG+A +++G+ ++ PE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 254 CSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 233
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 128
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 187
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 249
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 304
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+ R+ + NE A R F + PE G +I
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTA---RQGAKFPIKWTAPEAALYGRFTI 361
Query: 257 KSDVFSFGMLLLEILS 272
KSDV+SFG+LL E+ +
Sbjct: 362 KSDVWSFGILLTELTT 377
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 80 KLGEGGFGPVYKG----VLAKGDEI--AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LGEG FG V+ + + D+I AVK L S ++ EA ++ +QH+++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGT---------RLQIIEGIVE 183
G C+E D ++++EY+ + L+ FL VL+ G L I + I
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG---- 239
G++YL + +HRDL N L+ + + KI DFGM+R + + RV G
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVGGHTML 192
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEF 279
++PPE + + +SDV+S G++L EI + K +
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 126
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG-AKFPIKWTAPESLAYN 185
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ E + N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ SL DF + K L L + + I G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ E + N SLD FL DA V+ +G ++ GI G+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 131
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 132 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 184
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYLE--- 129
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A + PE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG-AKFPIKWTAPESLAYN 188
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 130
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRDL A N L+ + K++DFG++R+ G+ A + PE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG-AKFPIKWTAPESLAYN 189
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G FG VYKG GD +AVK L+V + Q LQ KNE V+ K +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ ++ ++ SL L + + E+ + I G+ YLH S I
Sbjct: 88 YSTA-PQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---QGI 253
IHRDLK++NI L ++ KI DFG+A +++G+ ++ PE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 254 CSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV++FG++L E+++G+ Y +IN DQ
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ-------LPYSNINNRDQ 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQ 127
N S +G G FG V G L K +A+K L V + + ++ EA ++ +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
H N++RL G + +++ E + N SLD FL DA V+ +G ++ GI G+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG----MLRGIASGM 160
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL S + +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 213
Query: 246 -----PEYVYQGICSIKSDVFSFGMLLLEILS 272
PE + + SDV+S+G++L E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 27/215 (12%)
Query: 80 KLGEGGFGPVYKGVL---AKGDE---IAVKRLSVRSRQGL-QELKNEALVIAKVQHKNLV 132
+LGE FG VYKG L A G++ +A+K L ++ L +E ++EA++ A++QH N+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 133 RLLGCCIERDEKL-LIYEYLPNKSLDFFLF-------------DATKRVLLELGTRLQII 178
LLG + +D+ L +I+ Y + L FL D T + LE + ++
Sbjct: 93 CLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESKANTNRV 237
I G+ YL H ++H+DL N+L+ ++ KISD G+ R ++ + K N +
Sbjct: 152 AQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G SI SD++S+G++L E+ S
Sbjct: 209 L-PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 27/215 (12%)
Query: 80 KLGEGGFGPVYKGVL---AKGDE---IAVKRLSVRSRQGL-QELKNEALVIAKVQHKNLV 132
+LGE FG VYKG L A G++ +A+K L ++ L +E ++EA++ A++QH N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 133 RLLGCCIERDEKL-LIYEYLPNKSLDFFLF-------------DATKRVLLELGTRLQII 178
LLG + +D+ L +I+ Y + L FL D T + LE + ++
Sbjct: 76 CLLG-VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESKANTNRV 237
I G+ YL H ++H+DL N+L+ ++ KISD G+ R ++ + K N +
Sbjct: 135 AQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G SI SD++S+G++L E+ S
Sbjct: 192 L-PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ L DF + K L L + + I G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 33/229 (14%)
Query: 73 NNFSDTNKLGEGGFGPVYK----GVLA--KGDEIAVKRLSVRSRQGLQ-ELKNEALVIAK 125
NN +GEG FG V++ G+L +AVK L + +Q + + EA ++A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLL-----ELGTR------ 174
+ N+V+LLG C L++EY+ L+ FL + + +L TR
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 175 ----------LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR- 223
L I + G+ YL S + +HRDL N L+ + M KI+DFG++R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 224 IFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
I+ + KA+ N A ++PPE ++ + +SDV+++G++L EI S
Sbjct: 224 IYSADYYKADGND-AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 16/229 (6%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG+G FG V+ G +A+K L + + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ L DF + K L L + + I G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSI 256
RDL+A+NIL+ + + K++DFG+AR+ + NE T R F + PE G +I
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 194
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESC 305
KSDV+SFG+LL E+ + + + G ++ DQ + ++ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVERGYRMPCPPEC 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 127/270 (47%), Gaps = 43/270 (15%)
Query: 32 LSMNLKADDIELSNKANNRRKSTKREVELPLFSFSSVAAATNNFSDTNK--------LGE 83
+ M L++ + +LS R ST P +SF+ ++ ++ + + LG
Sbjct: 12 MQMELQSPEYKLSK----LRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGH 67
Query: 84 GGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
G FG VY+G ++ ++AVK L V S Q + EAL+I+K H+N+VR +G
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 127
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIEGIVEGLLYLH 189
++ + ++ E + L FL + R +L+L L + I G YL
Sbjct: 128 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLE 184
Query: 190 LHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNRVAG----TFG 242
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 237
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++PPE +GI + K+D +SFG+LL EI S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ------ISSAMEYL---E 335
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHR+L A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 394
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 332
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHR+L A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 391
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 392 KFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 17/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
+KLG G +G VY+GV K +AVK L + + ++E EA V+ +++H NLV+LLG
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-----VLLELGTRLQIIEGIVEGLLYLHLHS 192
C +I E++ +L +L + ++ VLL + T+ I + YL
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ------ISSAMEYL---E 374
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHR+L A N L+ + K++DFG++R+ G+ A+ + PE +
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYN 433
Query: 253 ICSIKSDVFSFGMLLLEILS 272
SIKSDV++FG+LL EI +
Sbjct: 434 KFSIKSDVWAFGVLLWEIAT 453
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGD---EIAVKRLSVRSRQGLQE-LKNEALVIAK 125
NN LG G FG V + L K D ++AVK L + +E L +E +++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-------FDATKRVLLELGTRLQI 177
+ QH+N+V LLG C L+I EY L FL D LEL L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
+ +G+ +L + IHRD+ A N+LL KI DFG+AR + +
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-GKK-------NTEFYHTGYLSING 289
++ PE ++ + +++SDV+S+G+LL EI S G N++FY L +G
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK---LVKDG 271
Query: 290 YDQTQVASKIK----LVESCLA-----RP-FRQYCCILK 318
Y Q A K ++++C A RP F+Q C L+
Sbjct: 272 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGD---EIAVKRLSVRSRQGLQE-LKNEALVIAK 125
NN LG G FG V + L K D ++AVK L + +E L +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-------FDATKRVLLELGTRLQI 177
+ QH+N+V LLG C L+I EY L FL D LEL L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
+ +G+ +L + IHRD+ A N+LL KI DFG+AR + +
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-GKK-------NTEFYHTGYLSING 289
++ PE ++ + +++SDV+S+G+LL EI S G N++FY L +G
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK---LVKDG 279
Query: 290 YDQTQVASKIK----LVESCLA-----RP-FRQYCCILK 318
Y Q A K ++++C A RP F+Q C L+
Sbjct: 280 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 39/241 (16%)
Query: 61 PLFSFSSVAAATNNFSDTNK--------LGEGGFGPVYKGVLAKGD------EIAVKRLS 106
P +SF+ ++ ++ + + LG G FG VY+G ++ ++AVK L
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 107 -VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK 165
V S Q + EAL+I+K+ H+N+VR +G ++ + ++ E + L FL +
Sbjct: 71 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 166 R-------VLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PK 215
R +L+L L + I G YL + IHRD+ A N LL K
Sbjct: 131 RPSQPSSLAMLDL---LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 184
Query: 216 ISDFGMARIFKGNESKANTNRVAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
I DFGMAR + +A+ R G ++PPE +GI + K+D +SFG+LL EI
Sbjct: 185 IGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 272 S 272
S
Sbjct: 241 S 241
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 81 LGEGGFGPVYKGVLAKGD-----EIAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRL 134
+G G FG VYKG+L +A+K L + + + EA ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLF--DATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G + ++I EY+ N +LD FL D VL +G ++ GI G+ YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG----MLRGIAAGMKYL---A 164
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGN-ESKANTNRVAGTFGYIPPEYVYQ 251
+ +HRDL A NIL++ + K+SDFG++R+ + + E+ T+ + PE +
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 252 GICSIKSDVFSFGMLLLEILS 272
+ SDV+SFG+++ E+++
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT 245
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 39/241 (16%)
Query: 61 PLFSFSSVAAATNNFSDTNK--------LGEGGFGPVYKGVLAKGD------EIAVKRLS 106
P +SF+ ++ ++ + + LG G FG VY+G ++ ++AVK L
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 107 -VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK 165
V S Q + EAL+I+K H+N+VR +G ++ + ++ E + L FL +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 166 R-------VLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PK 215
R +L+L L + I G YL + IHRD+ A N LL K
Sbjct: 131 RPSQPSSLAMLDL---LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 184
Query: 216 ISDFGMARIFKGNESKANTNRVAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
I DFGMAR + +A+ R G ++PPE +GI + K+D +SFG+LL EI
Sbjct: 185 IGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 272 S 272
S
Sbjct: 241 S 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKG-VLAKGDEIAVKRLSVRS--RQGL-QELKNEAL 121
+ + +F N LG+G F VY+ + G E+A+K + ++ + G+ Q ++NE
Sbjct: 4 TCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVK 63
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGI 181
+ +++H +++ L + + L+ E N ++ +L + K E R + I
Sbjct: 64 IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEAR-HFMHQI 121
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
+ G+LYLH H I+HRDL SN+LL + M KI+DFG+A K K T + GT
Sbjct: 122 ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTP 176
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
YI PE + ++SDV+S G + +L G+
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 22/221 (9%)
Query: 78 TNKLGEGGFGPVYKGVLAKGDEIAVKRLSV--RSRQGLQELKNEALVIAKVQHKNLVRLL 135
+ ++G G FG VYKG GD +AVK L V + + Q +NE V+ K +H N++ +
Sbjct: 41 STRIGSGSFGTVYKGKW-HGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLF-DATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
G + +D ++ ++ SL L TK + +L + I +G+ YLH +
Sbjct: 99 GY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLHAKN-- 152
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY---Q 251
IIHRD+K++NI L + + KI DFG+A + + G+ ++ PE +
Sbjct: 153 -IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 252 GICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
S +SDV+S+G++L E+++G+ Y IN DQ
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGE-------LPYSHINNRDQ 245
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 39/241 (16%)
Query: 61 PLFSFSSVAAATNNFSDTNK--------LGEGGFGPVYKGVLAKGD------EIAVKRLS 106
P +SF+ ++ ++ + + LG G FG VY+G ++ ++AVK L
Sbjct: 17 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 76
Query: 107 -VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK 165
V S Q + EAL+I+K H+N+VR +G ++ + ++ E + L FL +
Sbjct: 77 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 136
Query: 166 R-------VLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PK 215
R +L+L L + I G YL + IHRD+ A N LL K
Sbjct: 137 RPSQPSSLAMLDL---LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 190
Query: 216 ISDFGMARIFKGNESKANTNRVAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
I DFGMAR + +A+ R G ++PPE +GI + K+D +SFG+LL EI
Sbjct: 191 IGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 272 S 272
S
Sbjct: 247 S 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 43/270 (15%)
Query: 32 LSMNLKADDIELSNKANNRRKSTKREVELPLFSFSSVAAATNNFSDTNK--------LGE 83
+ M L++ + +LS R ST P + F+ ++ ++ + + LG
Sbjct: 2 MQMELQSPEYKLSK----LRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGH 57
Query: 84 GGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
G FG VY+G ++ ++AVK L V S Q + EAL+I+K H+N+VR +G
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 117
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIEGIVEGLLYLH 189
++ + ++ E + L FL + R +L+L L + I G YL
Sbjct: 118 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLE 174
Query: 190 LHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNRVAG----TFG 242
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 227
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++PPE +GI + K+D +SFG+LL EI S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 161
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 220
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQICKGMEYL---G 134
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 193
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 134
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 193
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 125/255 (49%), Gaps = 36/255 (14%)
Query: 81 LGEGGFG--------PVYKGVLAKGDEIAVKRL----SVRSRQGLQELKNEALVIAKVQH 128
LGEG FG P G G+ +AVK L + R G Q E ++ + H
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQ---REIEILRTLYH 70
Query: 129 KNLVRLLGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
+++V+ GCC ++ EK L+ EY+P SL +L R + L L + I EG+
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMA 126
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNE-SKANTNRVAGTFGYI 244
YLH IHR L A N+LLD + KI DFG+A+ + +G+E + + + F Y
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVE- 303
PE + + SDV+SFG+ L E+L+ + + HT + + G+ Q Q+ + ++L E
Sbjct: 184 -PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM-TVLRLTEL 241
Query: 304 ----SCLARPFRQYC 314
L RP R C
Sbjct: 242 LERGERLPRPDRCPC 256
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 134
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 193
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 189
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 130
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 189
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 136
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 195
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGD---EIAVKRLSVRSRQGLQE-LKNEALVIAK 125
NN LG G FG V + L K D ++AVK L + +E L +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
+ QH+N+V LLG C L+I EY L FL K +LE I +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLST 163
Query: 185 LLYLHLHSRV----------RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
LH S+V IHRD+ A N+LL KI DFG+AR + +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-GKK-------NTEFYHTGYLS 286
++ PE ++ + +++SDV+S+G+LL EI S G N++FY L
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK---LV 280
Query: 287 INGYDQTQVASKIK----LVESCLA-----RP-FRQYCCILK 318
+GY Q A K ++++C A RP F+Q C L+
Sbjct: 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 128
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 187
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 136
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 195
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 149
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 208
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 149
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 208
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 131
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESLT 190
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 131
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 190
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 125/255 (49%), Gaps = 36/255 (14%)
Query: 81 LGEGGFG--------PVYKGVLAKGDEIAVKRL----SVRSRQGLQELKNEALVIAKVQH 128
LGEG FG P G G+ +AVK L + R G Q E ++ + H
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQ---REIEILRTLYH 69
Query: 129 KNLVRLLGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
+++V+ GCC ++ EK L+ EY+P SL +L R + L L + I EG+
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMA 125
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNE-SKANTNRVAGTFGYI 244
YLH IHR L A N+LLD + KI DFG+A+ + +G+E + + + F Y
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVE- 303
PE + + SDV+SFG+ L E+L+ + + HT + + G+ Q Q+ + ++L E
Sbjct: 183 -PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM-TVLRLTEL 240
Query: 304 ----SCLARPFRQYC 314
L RP R C
Sbjct: 241 LERGERLPRPDRCPC 255
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 138
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 197
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGD---EIAVKRLSVRSRQGLQE-LKNEALVIAK 125
NN LG G FG V + L K D ++AVK L + +E L +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
+ QH+N+V LLG C L+I EY L FL K +LE I
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTAST 163
Query: 185 LLYLHLHSRV----------RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
LH S+V IHRD+ A N+LL KI DFG+AR + +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-GKK-------NTEFYHTGYLS 286
++ PE ++ + +++SDV+S+G+LL EI S G N++FY L
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK---LV 280
Query: 287 INGYDQTQVASKIK----LVESCLA-----RP-FRQYCCILK 318
+GY Q A K ++++C A RP F+Q C L+
Sbjct: 281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K+
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 162
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A+ R
Sbjct: 163 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR 215
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 162
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A+ R
Sbjct: 163 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR 215
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 12/202 (5%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
F KLGEG +G VYK + + G +A+K++ V S LQE+ E ++ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 134 LLGCCIERDEKLLIYEYLPNKSL-DFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G + + ++ EY S+ D E+ T I++ ++GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLEYLHF-- 143
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+R IHRD+KA NILL+ E K++DFG+A + A N V GT ++ PE + +
Sbjct: 144 -MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 253 ICSIKSDVFSFGMLLLEILSGK 274
+ +D++S G+ +E+ GK
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 162
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A+ R
Sbjct: 163 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR 215
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 147
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A+ R
Sbjct: 148 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR 200
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 139
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A+ R
Sbjct: 140 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR 192
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 147
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A+ R
Sbjct: 148 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR 200
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 188
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A R
Sbjct: 189 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYR 241
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 39/241 (16%)
Query: 61 PLFSFSSVAAATNNFSDTNK--------LGEGGFGPVYKGVLAKGD------EIAVKRLS 106
P +SF+ ++ ++ + + LG G FG VY+G ++ ++AVK L
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 107 -VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK 165
V S Q + EAL+I+K H+N+VR +G ++ + ++ E + L FL +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 166 R-------VLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PK 215
R +L+L L + I G YL + IHRD+ A N LL K
Sbjct: 131 RPSQPSSLAMLDL---LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 184
Query: 216 ISDFGMARIFKGNESKANTNRVAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
I DFGMA+ + +A+ R G ++PPE +GI + K+D +SFG+LL EI
Sbjct: 185 IGDFGMAQ----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 272 S 272
S
Sbjct: 241 S 241
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 30/223 (13%)
Query: 80 KLGEGGFGPVYKG----VLAKGDE--IAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LGEG FG V+ + D+ +AVK L + ++ + EA ++ +QH+++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFF----------LFDATKRVL---LELGTRLQIIEG 180
G C + D ++++EY+ + L+ F L D R L L L I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG- 239
I G++YL + +HRDL N L+ + KI DFGM+R + + RV G
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVGGH 194
Query: 240 ---TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEF 279
++PPE + + +SDV+SFG++L EI + K F
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAKGD------EIAVKRLS-VRSRQGLQELKNEALVIAKV 126
N + LG G FG VY+G ++ ++AVK L V S Q + EAL+I+K
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR-------VLLELGTRLQIIE 179
H+N+VR +G ++ + ++ E + L FL + R +L+L L +
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVAR 165
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMK---PKISDFGMARIFKGNESKANTNR 236
I G YL + IHRD+ A N LL KI DFGMAR + +A R
Sbjct: 166 DIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYR 218
Query: 237 VAG----TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
G ++PPE +GI + K+D +SFG+LL EI S
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI E+LP SL +L +R+ + LQ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 134
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHRDL NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLT 193
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 80 KLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG+G FG V Y + G+ +AVK+L + + L++ + E ++ +QH N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 135 LGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C R LI EYLP SL +L +R+ + LQ I +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 132
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYVY 250
R IHR+L NIL++ E + KI DFG+ ++ ++ K + F Y PE +
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESLT 191
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
+ S+ SDV+SFG++L E+ +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 24/229 (10%)
Query: 81 LGEGGFG--------PVYKGVLAKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNL 131
LGEG FG P G G+ +AVK L Q K E ++ + H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 132 VRLLGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
++ GCC ++ EK L+ EY+P SL +L R + L L + I EG+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNE-SKANTNRVAGTFGYIPPE 247
IHR+L A N+LLD + KI DFG+A+ + +G+E + + + F Y PE
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PE 190
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVA 296
+ + SDV+SFG+ L E+L+ +++ T +L + G Q Q+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 239
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 45/285 (15%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGD---EIAVKRLSVRSRQGLQE-LKNEALVIAK 125
NN LG G FG V + L K D ++AVK L + +E L +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGT 173
+ QH+N+V LLG C L+I EY L FL ++ + +L +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 174 R--LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK 231
R L + +G+ +L + IHRD+ A N+LL KI DFG+AR + +
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-GKK-------NTEFYHTG 283
++ PE ++ + +++SDV+S+G+LL EI S G N++FY
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK-- 280
Query: 284 YLSINGYDQTQVASKIK----LVESCLA-----RP-FRQYCCILK 318
L +GY Q A K ++++C A RP F+Q C L+
Sbjct: 281 -LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRL 175
+EA ++ + H N++RL G +++ EY+ N SLD FL D ++ +G
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG--- 155
Query: 176 QIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTN 235
++ G+ G+ YL S + +HRDL A N+L+D + K+SDFG++R+ + + A T
Sbjct: 156 -MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 236 RVAGTFGYIP-----PEYVYQGICSIKSDVFSFGMLLLEILS 272
T G IP PE + S SDV+SFG+++ E+L+
Sbjct: 212 ----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 24/229 (10%)
Query: 81 LGEGGFG--------PVYKGVLAKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNL 131
LGEG FG P G G+ +AVK L Q K E ++ + H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 132 VRLLGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
++ GCC ++ EK L+ EY+P SL +L R + L L + I EG+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNE-SKANTNRVAGTFGYIPPE 247
IHR+L A N+LLD + KI DFG+A+ + +G+E + + + F Y PE
Sbjct: 135 ---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PE 190
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVA 296
+ + SDV+SFG+ L E+L+ +++ T +L + G Q Q+
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 239
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 79 NKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKNLVRLLG 136
++G G FG V+ G L A +AVK L+ + EA ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
C ++ ++ E + + DF F T+ L + T LQ++ G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEYVYQ 251
IHRDL A N L+ ++ KISDFGM+R E +G +P PE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 252 GICSIKSDVFSFGMLLLEILS 272
G S +SDV+SFG+LL E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 16/211 (7%)
Query: 70 AATNNF---SDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAK 125
A N+F S T LG G FG V+K A G ++A K + R + +E+KNE V+ +
Sbjct: 83 GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQ 142
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H NL++L +++ +L+ EY+ L + D + L EL T L ++ I EG+
Sbjct: 143 LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTIL-FMKQICEGI 200
Query: 186 LYLHLHSRVRIIHRDLKASNIL-LDKEMKP-KISDFGMARIFKGNES-KANTNRVAGTFG 242
++H ++ I+H DLK NIL ++++ K KI DFG+AR +K E K N GT
Sbjct: 201 RHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF----GTPE 253
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ PE V S +D++S G++ +LSG
Sbjct: 254 FLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 52/292 (17%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGD---EIAVKRLSVRSRQGLQE-LKNEALVIAK 125
NN LG G FG V + L K D ++AVK L + +E L +E +++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVL---------------- 168
+ QH+N+V LLG C L+I EY L FL + +L
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 169 ----LELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARI 224
LEL L + +G+ +L + IHRD+ A N+LL KI DFG+AR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 225 FKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-GKK-------N 276
+ + ++ PE ++ + +++SDV+S+G+LL EI S G N
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 267
Query: 277 TEFYHTGYLSINGYDQTQVASKIK----LVESCLA-----RP-FRQYCCILK 318
++FY L +GY Q A K ++++C A RP F+Q C L+
Sbjct: 268 SKFYK---LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+LG G FG V G ++AVK + S E EA + K+ H LV+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ ++ EY+ N L +L K LE L++ + EG+ +L H + IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS 258
RDL A N L+D+++ K+SDFGM R ++ ++ + PE + S KS
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG-TKFPVKWSAPEVFHYFKYSSKS 186
Query: 259 DVFSFGMLLLEILS-GKKNTEFY 280
DV++FG+L+ E+ S GK + Y
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLY 209
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 18/162 (11%)
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRL 175
+EA ++ + H N++RL G +++ EY+ N SLD FL D ++ +G
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG--- 155
Query: 176 QIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTN 235
++ G+ G+ YL S + +HRDL A N+L+D + K+SDFG++R+ + + A T
Sbjct: 156 -MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 236 RVAGTFGYIP-----PEYVYQGICSIKSDVFSFGMLLLEILS 272
T G IP PE + S SDV+SFG+++ E+L+
Sbjct: 212 ----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 21/203 (10%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L + +A+K L + + ++ +EA ++ + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKR-VLLELGTRLQIIEGIVEGLLYLHLHSRV 194
G + ++I EY+ N SLD FL R +++L + ++ GI G+ YL S +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL---SDM 150
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEYV 249
+HRDL A NIL++ + K+SDFGM+R+ + + A T R G IP PE +
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAI 206
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ SDV+S+G+++ E++S
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 21/203 (10%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L + +A+K L + + ++ +EA ++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKR-VLLELGTRLQIIEGIVEGLLYLHLHSRV 194
G + ++I EY+ N SLD FL R +++L + ++ GI G+ YL S +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL---SDM 135
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEYV 249
+HRDL A NIL++ + K+SDFGM+R+ + + A T R G IP PE +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAI 191
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ SDV+S+G+++ E++S
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 79 NKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKNLVRLLG 136
++G G FG V+ G L A +AVK L+ + EA ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
C ++ ++ E + + DF F T+ L + T LQ++ G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEYVYQ 251
IHRDL A N L+ ++ KISDFGM+R E +G +P PE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 252 GICSIKSDVFSFGMLLLEILS 272
G S +SDV+SFG+LL E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 25/197 (12%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
KLG G FG V+ K ++AVK + S ++ EA V+ +QH LV+L +
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL-HAVV 246
Query: 140 ERDEKLLIYEYLPNKSL-DFFLFD-ATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
++ +I E++ SL DF D +K+ L +L + I EG+ ++ + I
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRN---YI 300
Query: 198 HRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICS 255
HRDL+A+NIL+ + KI+DFG+A RV F + PE + G +
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLA-------------RVGAKFPIKWTAPEAINFGSFT 347
Query: 256 IKSDVFSFGMLLLEILS 272
IKSDV+SFG+LL+EI++
Sbjct: 348 IKSDVWSFGILLMEIVT 364
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 21/203 (10%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L + +A+K L + + ++ +EA ++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKR-VLLELGTRLQIIEGIVEGLLYLHLHSRV 194
G + ++I EY+ N SLD FL R +++L + ++ GI G+ YL S +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL---SDM 129
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEYV 249
+HRDL A NIL++ + K+SDFGM+R+ + + A T R G IP PE +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAI 185
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+ SDV+S+G+++ E++S
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 16/200 (8%)
Query: 81 LGEGGFGPVYKGV-LAKGDEI----AVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRL 134
LG G FG V+KGV + +G+ I +K + +S RQ Q + + L I + H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG--IVEGLLYLHLHS 192
LG C +L + +YLP SL D ++ LG +L + G I +G+ YL H
Sbjct: 81 LGLCPGSSLQL-VTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
++HR+L A N+LL + +++DFG+A + ++ + + ++ E ++ G
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 253 ICSIKSDVFSFGMLLLEILS 272
+ +SDV+S+G+ + E+++
Sbjct: 193 KYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 16/200 (8%)
Query: 81 LGEGGFGPVYKGV-LAKGDEI----AVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRL 134
LG G FG V+KGV + +G+ I +K + +S RQ Q + + L I + H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG--IVEGLLYLHLHS 192
LG C +L + +YLP SL D ++ LG +L + G I +G+ YL H
Sbjct: 99 LGLCPGSSLQL-VTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
++HR+L A N+LL + +++DFG+A + ++ + + ++ E ++ G
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 253 ICSIKSDVFSFGMLLLEILS 272
+ +SDV+S+G+ + E+++
Sbjct: 211 KYTHQSDVWSYGVTVWELMT 230
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 25/226 (11%)
Query: 81 LGEGGFGPVYKGVL-AKGDE---IAVKRL----SVRSRQGLQELKNEALVIAKVQHKNLV 132
+G G FG V +G L A G + +A+K L + R R+ E +EA ++ + +H N++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR---EFLSEASIMGQFEHPNII 80
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
RL G +++ E++ N +LD FL + + +++L + ++ GI G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYL--- 134
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----P 246
+ + +HRDL A NIL++ + K+SDFG++R + N S G G IP P
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG--GKIPIRWTAP 192
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
E + + SD +S+G+++ E++S + + + IN +Q
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 238
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ V F + PPE + S K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 81 LGEGGFGPVYKGVL------AKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVR 133
LGEG FG V K A +AVK L S L++L +E V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL---------------------FDATKRVLLELG 172
L G C + LLI EY SL FL D L +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
+ I +G+ YL + ++++HRDL A NIL+ + K KISDFG++R +S
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ ++ E ++ I + +SDV+SFG+LL EI++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQGLQELKN---EALVIAKVQHKNL 131
+KLG GG VY LA+ ++A+K + + R+ + LK E +++ H+N+
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
V ++ E D L+ EY+ +L ++ L + T + I++G+ + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAH-- 128
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQ 251
+RI+HRD+K NIL+D KI DFG+A+ S TN V GT Y PE
Sbjct: 129 -DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 252 GICSIKSDVFSFGMLLLEILSGK 274
+D++S G++L E+L G+
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGE 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYL---ESKQFLHR 124
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ V F + PPE + S K
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 182 SDIWAFGVLMWEIYS 196
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 25/226 (11%)
Query: 81 LGEGGFGPVYKGVL-AKGDE---IAVKRL----SVRSRQGLQELKNEALVIAKVQHKNLV 132
+G G FG V +G L A G + +A+K L + R R+ E +EA ++ + +H N++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR---EFLSEASIMGQFEHPNII 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
RL G +++ E++ N +LD FL + + +++L + ++ GI G+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYL--- 132
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----P 246
+ + +HRDL A NIL++ + K+SDFG++R + N S G G IP P
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG--GKIPIRWTAP 190
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
E + + SD +S+G+++ E++S + + + IN +Q
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 236
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYL---ESKQFLHR 128
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ V F + PPE + S K
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 186 SDIWAFGVLMWEIYS 200
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQG-------LQELKNEALV 122
A N ++G+GGFG V+KG L K +A+K L + +G QE + E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
++ + H N+V+L G + + ++ E++P L L D + + +L+++ I
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIA 132
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDK--EMKP---KISDFGMARIFKGNESKANTNRV 237
G+ Y+ + I+HRDL++ NI L E P K++DFG+++ +S + + +
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGL 186
Query: 238 AGTFGYIPPEYV--YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTG 283
G F ++ PE + + + K+D +SF M+L IL+G+ + Y G
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYL---ESKQFLHR 129
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ V F + PPE + S K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 23/204 (11%)
Query: 81 LGEGGFGPVYKGVLA----KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L + +A+K L V + + ++ EA ++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
G + +++ EY+ N SLD FL D V+ +G ++ GI G+ YL S
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVG----MLRGISAGMKYL---SD 142
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEY 248
+ +HRDL A NIL++ + K+SDFG++R+ + + A T R G IP PE
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTAPEA 198
Query: 249 VYQGICSIKSDVFSFGMLLLEILS 272
+ + SDV+S+G+++ E++S
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ V F + PPE + S K
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 193 SDIWAFGVLMWEIYS 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ V F + PPE + S K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 81 LGEGGFGPVYKGVL------AKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVR 133
LGEG FG V K A +AVK L S L++L +E V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL---------------------FDATKRVLLELG 172
L G C + LLI EY SL FL D L +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
+ I +G+ YL + ++++HRDL A NIL+ + K KISDFG++R +S
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ ++ E ++ I + +SDV+SFG+LL EI++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 21/224 (9%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRL-SVRSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L + +A+K L S + + ++ +EA ++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLF--DATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
G + ++I E++ N SLD FL D V+ +G ++ GI G+ YL +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG----MLRGIAAGMKYL---AD 153
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEY 248
+ +HRDL A NIL++ + K+SDFG++R + + S G G IP PE
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEA 211
Query: 249 VYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
+ + SDV+S+G+++ E++S + + T IN +Q
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQEL-KNEALVIAKVQHKNLV 132
F+ +++G+G FG VYKG+ E+ A+K + + + E + E V+++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
R G ++ + +I EYL S D K LE I+ I++GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSA----LDLLKPGPLEETYIATILREILKGLDYLHSE- 135
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
R IHRD+KA+N+LL ++ K++DFG+A +++ N GT ++ PE + Q
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYH 281
K+D++S G+ +E+ G+ H
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLH 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 81 LGEGGFG--------PVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNL 131
LGEG FG P G G+ +AVK L + Q K E ++ + H+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 132 VRLLGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
++ GCC + L+ EY+P SL +L R + L L + I EG+ YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNES-KANTNRVAGTFGYIPPE 247
IHRDL A N+LLD + KI DFG+A+ + +G+E + + + F Y PE
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PE 207
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVE 303
+ + SDV+SFG+ L E+L+ +++ T +L + G Q Q+ + ++L E
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM-TVLRLTE 262
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQG-------LQELKNEALV 122
A N ++G+GGFG V+KG L K +A+K L + +G QE + E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
++ + H N+V+L G + + ++ E++P L L D + + +L+++ I
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIA 132
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDK--EMKP---KISDFGMARIFKGNESKANTNRV 237
G+ Y+ + I+HRDL++ NI L E P K++DFG ++ +S + + +
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGL 186
Query: 238 AGTFGYIPPEYV--YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTG 283
G F ++ PE + + + K+D +SF M+L IL+G+ + Y G
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 81 LGEGGFGPVYKGVL------AKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVR 133
LGEG FG V K A +AVK L S L++L +E V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFL---------------------FDATKRVLLELG 172
L G C + LLI EY SL FL D L +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
+ I +G+ YL + + ++HRDL A NIL+ + K KISDFG++R +S
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ ++ E ++ I + +SDV+SFG+LL EI++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIE 140
+G+G FG V G +G+++AVK +++ Q EA V+ +++H NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 141 RDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
L ++ EY+ SL +L + R +L L+ + E + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSD 259
DL A N+L+ ++ K+SDFG+ K S +T ++ + PE + + S KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKL--PVKWTAPEALREAAFSTKSD 187
Query: 260 VFSFGMLLLEILS 272
V+SFG+LL EI S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I EG
Sbjct: 72 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 127 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 80 KLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLL 135
K+GEG G V LA+ G ++AVK + +R +Q + L NE +++ QH N+V +
Sbjct: 52 KIGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
+ +E ++ E+L +L D +V L + E +++ L YLH
Sbjct: 109 KSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG--- 161
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGI 253
+IHRD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + + +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFG----FCAQISKDVPKRKXLVGTPYWMAPEVISRSL 217
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ + D++S G++++E++ G+
Sbjct: 218 YATEVDIWSLGIMVIEMVDGE 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 149
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 246
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 17 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 72
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 130
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQG-------LQELKNEALV 122
A N ++G+GGFG V+KG L K +A+K L + +G QE + E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
++ + H N+V+L G + + ++ E++P L L D + + +L+++ I
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIA 132
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDK--EMKP---KISDFGMARIFKGNESKANTNRV 237
G+ Y+ + I+HRDL++ NI L E P K++DF +++ +S + + +
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGL 186
Query: 238 AGTFGYIPPEYV--YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTG 283
G F ++ PE + + + K+D +SF M+L IL+G+ + Y G
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 13 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 68
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-----ATKRVLL--ELG 172
A V+ + ++VRLLG + L+I E + L +L A VL L
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
+Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 8 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 63
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 121
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIE 140
+G+G FG V G +G+++AVK +++ Q EA V+ +++H NLV+LLG +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 141 RDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
L ++ EY+ SL +L + R +L L+ + E + YL ++ +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSD 259
DL A N+L+ ++ K+SDFG+ K S +T ++ + PE + + S KSD
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLP--VKWTAPEALREKKFSTKSD 368
Query: 260 VFSFGMLLLEILS 272
V+SFG+LL EI S
Sbjct: 369 VWSFGILLWEIYS 381
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 23 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-----ATKRVLLE--LG 172
A V+ + ++VRLLG + L+I E + L +L A VL L
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
+Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 81 LGEGGFGPVYKGVLAK--------GDEIAVKRLSVRSR-QGLQELKNEALVIAKVQHKNL 131
LGEG FG V L + G+++AVK L S + +LK E ++ + H+N+
Sbjct: 29 LGEGHFGKVE---LCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 132 VRLLGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
V+ G C E LI E+LP+ SL +L ++ L +L+ I +G+ YL
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLG 143
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT--NRVAGTFGYIPPE 247
SR + +HRDL A N+L++ E + KI DFG+ + + ++ +R + F Y PE
Sbjct: 144 --SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PE 199
Query: 248 YVYQGICSIKSDVFSFGMLLLEILS 272
+ Q I SDV+SFG+ L E+L+
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 81 LGEGGFGPVYKGVLAK-----GDEIAVKRLSVRSR-QGLQELKNEALVIAKVQHKNLVRL 134
LGEG FG V G+++AVK L S + +LK E ++ + H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 135 LGCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C E LI E+LP+ SL +L ++ L +L+ I +G+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLG--S 132
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT--NRVAGTFGYIPPEYVY 250
R + +HRDL A N+L++ E + KI DFG+ + + ++ +R + F Y PE +
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLM 190
Query: 251 QGICSIKSDVFSFGMLLLEILS 272
Q I SDV+SFG+ L E+L+
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIE 140
+G+G FG V G +G+++AVK +++ Q EA V+ +++H NLV+LLG +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 141 RDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
L ++ EY+ SL +L + R +L L+ + E + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSD 259
DL A N+L+ ++ K+SDFG+ K S +T ++ + PE + + S KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLP--VKWTAPEALREKKFSTKSD 196
Query: 260 VFSFGMLLLEILS 272
V+SFG+LL EI S
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+LG G FG V G ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
++ +I EY+ N L +L + R + L++ + + E + YL + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYL---ESKQFLHR 129
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGICSIK 257
DL A N L++ + K+SDFG++R +E T+ F + PPE + S K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 258 SDVFSFGMLLLEILS 272
SD+++FG+L+ EI S
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIE 140
+G+G FG V G +G+++AVK +++ Q EA V+ +++H NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 141 RDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
L ++ EY+ SL +L + R +L L+ + E + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 200 DLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSD 259
DL A N+L+ ++ K+SDFG+ K S +T ++ + PE + + S KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLP--VKWTAPEALREKKFSTKSD 181
Query: 260 VFSFGMLLLEILS 272
V+SFG+LL EI S
Sbjct: 182 VWSFGILLWEIYS 194
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 25/252 (9%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVK--RLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
LGEG FG V +G L + D ++AVK +L S++ ++E +EA + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 135 LGCCIERDEK-----LLIYEYLPNKSLDFFLFDA---TKRVLLELGTRLQIIEGIVEGLL 186
LG CIE + ++I ++ L +L + T + L T L+ + I G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMA-RIFKGNESKANTNRVAG-TFGYI 244
YL S +HRDL A N +L +M ++DFG++ +I+ G+ + R+A +I
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ--GRIAKMPVKWI 216
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVES 304
E + + + KSDV++FG+ + EI + + G + YD ++K E
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTP---YPGVQNHEMYDYLLHGHRLKQPED 273
Query: 305 CLARPFR-QYCC 315
CL + Y C
Sbjct: 274 CLDELYEIMYSC 285
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 169
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 266
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 149
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 246
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 147
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 244
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 150
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 247
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 150
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 247
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 69 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 124 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 145
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 242
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 78 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 76 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 131 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 77 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 76 DNPHVCRLLGICLTSTVQL-IMQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 131 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 168
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 265
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 148
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 245
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G+ YL +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV----AKGMKYL---A 142
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 81 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 136 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 75 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 79 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 78 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 78 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 77 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 85 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 78 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 100 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 154
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 82 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 21/224 (9%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRL-SVRSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L + +A+K L S + + ++ +EA ++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLF--DATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
G + ++I E++ N SLD FL D V+ +G ++ GI G+ YL +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG----MLRGIAAGMKYL---AD 127
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEY 248
+ +HR L A NIL++ + K+SDFG++R + + S G G IP PE
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEA 185
Query: 249 VYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
+ + SDV+S+G+++ E++S + + T IN +Q
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 151
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 248
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 150
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 247
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 81 LGEGGFGPVYKGVL---AKGD-EIAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V G L K D +A+K L V + + ++ EA ++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
G +++ E++ N +LD FL D V+ +G ++ GI G+ YL +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVG----MLRGIAAGMRYL---AD 163
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP-----PEY 248
+ +HRDL A NIL++ + K+SDFG++R+ + + T T G IP PE
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTT----TGGKIPVRWTAPEA 219
Query: 249 VYQGICSIKSDVFSFGMLLLEILS 272
+ + SDV+S+G+++ E++S
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 148
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGA------PPYPDVNTFDIT 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 45 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 100
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 158
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 159 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSR 110
+F A + + +LG+G FG VY+GV AKG DE +A+K + S+R R
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 111 QGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
E NEA V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 64 I---EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEME 118
Query: 171 ---------LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 175
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
R + + ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 176 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 155
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 252
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 16 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 71
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 129
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 150
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 247
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 17 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 72
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 130
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 16 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 71
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 129
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 10 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 65
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 123
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 209
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 306
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + A + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 81 LGEGGFGPVYKGVLAKGD----EIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+G G FG VY G L D AVK L+ + G + + E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 136 GCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLE--LGTRLQIIEGIVEGLLYLHLHS 192
G C+ + L++ Y+ + L F+ + T ++ +G LQ+ +G + +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-------MKFLA 151
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVY 250
+ +HRDL A N +LD++ K++DFG+AR E + N+ ++ E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQT 293
+ KSDV+SFG+LL E+++ Y +N +D T
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPP------YPDVNTFDIT 248
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
C + DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 155
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 156 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAG 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 23 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 136
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N ++ ++ KI DFGM R +
Sbjct: 137 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 79 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG A++ E + + ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 77 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG A++ E + + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 77 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG A++ E + + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 77 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG A++ E + + ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG A++ E + + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKG---------DEIAVKRLSVRSRQGLQELKNEALVIAKVQHK 129
K+GEG FG K +L K EI + R+S + R+ E + E V+A ++H
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKERE---ESRREVAVLANMKHP 83
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL- 188
N+V+ E ++ +Y L F +A K VL + QI++ V+ L L
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDL-FKRINAQKGVLFQ---EDQILDWFVQICLALK 139
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEY 248
H+H R +I+HRD+K+ NI L K+ ++ DFG+AR+ N + GT Y+ PE
Sbjct: 140 HVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEI 196
Query: 249 VYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+ KSD+++ G +L E+ + K E
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 82 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG A++ E + + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE---IAVKRLSVR---SRQGLQELKNEALVIAKV 126
F LG G FG VYKG+ E I V + +R S + +E+ +EA V+A V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 109 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 175
Query: 250 Y-QGICSIKSDVFSFGMLLLEILS 272
S D++S G + E+++
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 25/235 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQH 128
++N+ +LG+G F V + V G E A K ++ + S + Q+L+ EA + K+QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+VRL E L+++ + L D R I+ I+E + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H + I+HR+LK N+LL + K K++DFG+A + N+S+A + AGT GY+
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 175
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
PE + + S D+++ G++L +L GY DQ ++ ++IK
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILL----------VGYPPFWDEDQHRLYAQIK 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 25/235 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQH 128
++N+ +LG+G F V + V G E A K ++ + S + Q+L+ EA + K+QH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+VRL E L+++ + L D R I+ I+E + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H + I+HR+LK N+LL + K K++DFG+A + N+S+A + AGT GY+
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 174
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
PE + + S D+++ G++L +L GY DQ ++ ++IK
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILL----------VGYPPFWDEDQHRLYAQIK 219
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 29/222 (13%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKG---DE----IAVKRL----SVRSRQGLQELKNE 119
A + + +LG+G FG VY+GV AKG DE +A+K + S+R R E NE
Sbjct: 10 AREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI---EFLNE 65
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE--------- 170
A V+ + ++VRLLG + L+I E + L +L + R +E
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPS 123
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L +Q+ I +G+ YL+ + + +HRDL A N + ++ KI DFGM R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE + G+ + SDV+SFG++L EI +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 182
Query: 250 Y-QGICSIKSDVFSFGMLLLEILS 272
S D++S G + E+++
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-----IAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVRL 134
LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEGLLYLHLHS 192
LG C+ +L + + +P L D + LG++ L I +G+ YL
Sbjct: 85 LGICLTSTVQL-VTQLMPYGCL----LDHVRENRGRLGSQDLLNWCMQIAKGMSYLE--- 136
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
VR++HRDL A N+L+ KI+DFG+AR+ +E++ + + ++ E + +
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 253 ICSIKSDVFSFGMLLLEILS 272
+ +SDV+S+G+ + E+++
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F L G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 75 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y P
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAP 173
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 174 EILLG--CKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 25/235 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQH 128
++N+ +LG+G F V + V G E A K ++ + S + Q+L+ EA + K+QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+VRL E L+++ + L D R I+ I+E + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H + I+HR+LK N+LL + K K++DFG+A + N+S+A + AGT GY+
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPGYLS 175
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
PE + + S D+++ G++L +L GY DQ ++ ++IK
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILL----------VGYPPFWDEDQHRLYAQIK 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 25/176 (14%)
Query: 104 RLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL-----DF 158
++S++S+ + KNE +I ++++ + G DE +IYEY+ N S+ F
Sbjct: 80 KISIKSK--YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 159 FLFDATKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKI 216
F+ D + + Q+I+ I++ +L + ++H+ I HRD+K SNIL+DK + K+
Sbjct: 138 FVLDKNYTCFIPI----QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKL 193
Query: 217 SDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-----YQGICSIKSDVFSFGMLL 267
SDFG + + K + GT+ ++PPE+ Y G K D++S G+ L
Sbjct: 194 SDFGESEYMVDKKIKGS----RGTYEFMPPEFFSNESSYNG---AKVDIWSLGICL 242
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F L G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 82 DNPHVCRLLGICLTSTVQL-IMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 174
Query: 250 YQ-GICSIKSDVFSFGMLLLEILS 272
S D++S G + E+++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 175
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 176 LG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKV 126
A ++ LGEG +G V V +E +AVK + + R+ + +K E + +
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG----TRLQIIEGIV 182
H+N+V+ G E + + L EY L FD R+ ++G + ++
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLM 113
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
G++YLH + I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT
Sbjct: 114 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 243 YIPPEYV-YQGICSIKSDVFSFGMLLLEILSGK 274
Y+ PE + + + DV+S G++L +L+G+
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 175
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 176 LG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 174
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 175 LG--CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 182
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 183 LG--CKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-----IAVKRL-SVRSRQGLQELKNEALVIAKV 126
F L G FG VYKG+ E +A+K L S + +E+ +EA V+A V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEG 184
+ ++ RLLG C+ +L I + +P L D + +G++ L I +G
Sbjct: 82 DNPHVCRLLGICLTSTVQL-ITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
+ YL R++HRDL A N+L+ KI+DFG+A++ E + + ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILS 272
E + I + +SDV+S+G+ + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 63 FSFSSVAAATNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVR--SRQGLQELKNE 119
F ++ ++N+ +LG+G F V + V G E A K ++ + S + Q+L+ E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIE 179
A + K+QH N+VRL E L+++ + L D R I+
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ 135
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNR 236
I+E + Y H + I+HR+LK N+LL + K K++DFG+A + N+S+A +
Sbjct: 136 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHG 189
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVA 296
AGT GY+ PE + + S D+++ G++L +L GY DQ ++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL----------VGYPPFWDEDQHRLY 239
Query: 297 SKIK 300
++IK
Sbjct: 240 AQIK 243
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 179
Query: 250 YQ-GICSIKSDVFSFGMLLLEILS 272
S D++S G + E+++
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG----TRLQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 10/210 (4%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELK-NEALVIAKVQ 127
++++ F KLG G + VYKG+ G +A+K + + S +G E ++ +++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPN---KSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
H+N+VRL ++ L++E++ N K +D T R L EL +++G
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL-ELNLVKYFQWQLLQG 120
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYI 244
L + H +I+HRDLK N+L++K + K+ DFG+AR F G ++ V +
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVVTLWYRA 176
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
P + S D++S G +L E+++GK
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 175
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 176 LG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG----TRLQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAK--GDEIAVKRLSVRSRQ---GLQELKNEALV--I 123
A + ++GEG +G V+K K G +A+KR+ V++ + L ++ A++ +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 124 AKVQHKNLVRLLGCCI----ERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQII 178
+H N+VRL C +R+ KL L++E++ ++ L +L D + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ GL +LH H R++HRDLK NIL+ + K++DFG+ARI+ + + V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VV 180
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
T Y PE + Q + D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQEL-KNEALVI 123
+++A F+ ++G+G FG V+KG+ + ++ A+K + + + E + E V+
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKS-LDFFLFDATKRVLLELGTRLQIIEGIV 182
++ + + G ++ + +I EYL S LD L A ++ T L+ I+
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD--LLRAGPFDEFQIATMLK---EIL 130
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+GL YLH + IHRD+KA+N+LL ++ K++DFG+A + K NT GT
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPF 185
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYH 281
++ PE + Q K+D++S G+ +E+ G+ H
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG----TRLQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG----TRLQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG----TRLQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAK--GDEIAVKRLSVRSRQ---GLQELKNEALV--I 123
A + ++GEG +G V+K K G +A+KR+ V++ + L ++ A++ +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 124 AKVQHKNLVRLLGCCI----ERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQII 178
+H N+VRL C +R+ KL L++E++ ++ L +L D + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ GL +LH H R++HRDLK NIL+ + K++DFG+ARI+ + + V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VV 180
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
T Y PE + Q + D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAK--GDEIAVKRLSVRSRQ---GLQELKNEALV--I 123
A + ++GEG +G V+K K G +A+KR+ V++ + L ++ A++ +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 124 AKVQHKNLVRLLGCCI----ERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQII 178
+H N+VRL C +R+ KL L++E++ ++ L +L D + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ GL +LH H R++HRDLK NIL+ + K++DFG+ARI+ + + V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VV 180
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
T Y PE + Q + D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 150
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ S SD+++ G ++ ++++G
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAG 230
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQ 127
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
H N+V+LL ++ L++E+L DF DA+ + L + +++GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFM--DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPE 173
Query: 248 YVYQGIC---SIKSDVFSFGMLLLEILS 272
+ C S D++S G + E+++
Sbjct: 174 ILLG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 80
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HRDL A N ++ + KI DFGM R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGD---EIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
N+ + +GEG FG V K + K + A+KR+ S+ ++ E V+ K+
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSL-DF------------FLFDATKRVLLELGTR 174
H N++ LLG C R L EY P+ +L DF F + L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
L + G+ YL S+ + IHRDL A NIL+ + KI+DFG++R G E
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEV---- 184
Query: 235 NRVAGTFGYIPPEYVY-----QGICSIKSDVFSFGMLLLEILS 272
V T G +P ++ + + SDV+S+G+LL EI+S
Sbjct: 185 -YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 80
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HRDL A N ++ + KI DFGM R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGD---EIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
N+ + +GEG FG V K + K + A+KR+ S+ ++ E V+ K+
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSL-DF------------FLFDATKRVLLELGTR 174
H N++ LLG C R L EY P+ +L DF F + L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
L + G+ YL S+ + IHRDL A NIL+ + KI+DFG++R G E
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEV---- 194
Query: 235 NRVAGTFGYIPPEYVY-----QGICSIKSDVFSFGMLLLEILS 272
V T G +P ++ + + SDV+S+G+LL EI+S
Sbjct: 195 -YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 110/206 (53%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E++ ++ L F+ DA+ + L + +++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 174
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 175 LG--CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 77
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HRDL A N ++ + KI DFGM R + +
Sbjct: 138 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG +G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGE 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L DF DA+ + L + +++GL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM--DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y P
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAP 174
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 175 EILLG--CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L DF DA+ + L + +++GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM--DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y P
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAP 175
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 176 EILLG--CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LG+G +G VY G L+ IA+K + R + Q L E + ++HKN+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
E + E +P SL L + T + I+EGL YLH + +I+HR
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 146
Query: 200 DLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI-- 256
D+K N+L++ KISDFG ++ G T GT Y+ PE + +G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTG 283
+D++S G ++E+ +GK FY G
Sbjct: 205 AADIWSLGCTIIEMATGK--PPFYELG 229
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LG+G +G VY G L+ IA+K + R + Q L E + ++HKN+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHR 199
E + E +P SL L + T + I+EGL YLH + +I+HR
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 132
Query: 200 DLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI-- 256
D+K N+L++ KISDFG ++ G T GT Y+ PE + +G
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 257 KSDVFSFGMLLLEILSGKKNTEFYHTG 283
+D++S G ++E+ +GK FY G
Sbjct: 191 AADIWSLGCTIIEMATGK--PPFYELG 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAK 125
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 174
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 175 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 80 KLGEGGFGPVYKGVLAKGDEI----AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLL 135
+LG+G FG VYK AK E A K + +S + L++ E ++A H +V+LL
Sbjct: 26 ELGDGAFGKVYK---AKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQII-EGIVEGLLYLHLHSRV 194
G + ++ E+ P ++D + + R L E ++Q++ ++E L +LH
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTE--PQIQVVCRQMLEALNFLH---SK 136
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
RIIHRDLKA N+L+ E +++DFG++ K ++ + GT ++ PE V +C
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVV---MC 191
Query: 255 SI--------KSDVFSFGMLLLEI 270
K+D++S G+ L+E+
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 80 KLGEGGFGPVYKGVLAKGDEI----AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLL 135
+LG+G FG VYK AK E A K + +S + L++ E ++A H +V+LL
Sbjct: 18 ELGDGAFGKVYK---AKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQII-EGIVEGLLYLHLHSRV 194
G + ++ E+ P ++D + + R L E ++Q++ ++E L +LH
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTE--PQIQVVCRQMLEALNFLH---SK 128
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
RIIHRDLKA N+L+ E +++DFG++ K ++ + GT ++ PE V +C
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVV---MC 183
Query: 255 SI--------KSDVFSFGMLLLEI 270
K+D++S G+ L+E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVRS---RQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 147
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVRS---RQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 147
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAG 227
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAK 125
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 173
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 174 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVRS---RQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 80
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 132
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 133 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAG 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQEL-KNEALVIAKVQHKNLV 132
F+ K+G+G FG V+KG+ + ++ A+K + + + E + E V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
+ G ++ + +I EYL S D + L+ I+ I++GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRD+KA+N+LL + + K++DFG+A + K NT GT ++ PE + Q
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 179
Query: 253 ICSIKSDVFSFGMLLLEILSGK 274
K+D++S G+ +E+ G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 15/208 (7%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQ 127
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPE 173
Query: 248 YVYQGIC---SIKSDVFSFGMLLLEILS 272
+ C S D++S G + E+++
Sbjct: 174 ILLG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y P
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAP 173
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 174 EILLG--CKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQEL-KNEALVIAKVQHKNLV 132
F+ K+G+G FG V+KG+ + ++ A+K + + + E + E V+++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
+ G ++ + +I EYL S D + L+ I+ I++GL YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRD+KA+N+LL + + K++DFG+A + K NT GT ++ PE + Q
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQS 199
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYH 281
K+D++S G+ +E+ G+ H
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSELH 228
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAK 125
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 173
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 174 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-DATKRVLLELGTRLQIIEGIVEGL 185
H N+V+LL ++ L++E+L S+D F DA+ + L + +++GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 174
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 175 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 73
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 125
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 126 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAG 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-DATKRVLLELGTRLQIIEGIVEGL 185
H N+V+LL ++ L++E+L S+D F DA+ + L + +++GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 172
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 173 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 75
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 127
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 128 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAG 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 15/208 (7%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQ 127
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPE 173
Query: 248 YVYQGIC---SIKSDVFSFGMLLLEILS 272
+ C S D++S G + E+++
Sbjct: 174 ILLG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y P
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAP 175
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 176 EILLG--CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 76
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 128
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 129 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAG 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y P
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAP 176
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 177 EILLG--CKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQ 127
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPE 173
Query: 248 YVYQ-GICSIKSDVFSFGMLLLEILS 272
+ S D++S G + E+++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 148
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 74
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 126
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 127 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAG 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+ ++ + + +G+ E ++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 175
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 176 LG--CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAK 125
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 174
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 175 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+ ++ + + +G+ E ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + T+ V T Y PE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 174
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 175 LG--CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAK 125
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ +
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 173
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 174 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKV 126
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y P
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAP 173
Query: 247 EYVYQGIC---SIKSDVFSFGMLLLEILS 272
E + C S D++S G + E+++
Sbjct: 174 EILLG--CKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQ 127
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
H N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPE 173
Query: 248 YVYQ-GICSIKSDVFSFGMLLLEILS 272
+ S D++S G + E+++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 150
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVRS---RQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 148
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEIL 174
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 175 LG--CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE +
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEIL 176
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 177 LG--CKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 31/206 (15%)
Query: 80 KLGEGGFGPVYKG------VLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG VYK VLA A K + +S + L++ E ++A H N+V+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQII-EGIVEGLLYLHLHS 192
LL + ++ E+ ++D + + +R L E +++Q++ + ++ L YLH +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN- 154
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+IIHRDLKA NIL + K++DFG++ K + + GT ++ PE V
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVV--- 207
Query: 253 ICSI--------KSDVFSFGMLLLEI 270
+C K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHK 129
NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N+V+LL ++ L++E+L ++ L F+ DA+ + L + +++GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y PE +
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRAPEIL 174
Query: 250 YQGIC---SIKSDVFSFGMLLLEILS 272
C S D++S G + E+++
Sbjct: 175 LG--CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 151
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPV-YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V V + G +AVK++ +R +Q + L NE +++ QH+N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + +++ L LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 196 EVDIWSLGIMVIEMVDGE 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 150
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 148
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 151
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGP-VYKGVLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 148
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 150
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPV-YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V V + G +AVK++ +R +Q + L NE +++ QH+N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + +++ L LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 200 EVDIWSLGIMVIEMVDGE 217
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPV-YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V V + G +AVK++ +R +Q + L NE +++ QH+N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + +++ L LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 205 EVDIWSLGIMVIEMVDGE 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 80
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HRDL A N ++ + KI DFGM R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 150
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVR---SRQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 150
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAG 230
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPV-YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V V + G +AVK++ +R +Q + L NE +++ QH+N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + +++ L LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 207 EVDIWSLGIMVIEMVDGE 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 79
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HRDL A N ++ + KI DFGM R + +
Sbjct: 140 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 81 LGEGGFGPVYKG-VLAKGDEIAVKRLSVRS---RQGLQELKNEALVIAKVQHKNLVRLLG 136
LGEG F V LA E A+K L R + + E V++++ H V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 101
Query: 137 CCIERDEKLLI-YEYLPNKSLDFFL-----FDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ DEKL Y N L ++ FD T TR E IV L YLH
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHG 153
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRDLK NILL+++M +I+DFG A++ +A N GT Y+ PE +
Sbjct: 154 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ SD+++ G ++ ++++G
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAG 233
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LGEG G V V +E +AVK + + R+ + +K E + + H+N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR----LQIIEGIVEGLLYLHLHSRV 194
E + + L EY L FD R+ ++G + ++ G++YLH +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FD---RIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGI 253
I HRD+K N+LLD+ KISDFG+A +F+ N + N++ GT Y+ PE + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 254 CSIKSDVFSFGMLLLEILSGK 274
+ DV+S G++L +L+G+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 41/248 (16%)
Query: 48 NNRRKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGD---EIAVKR 104
N + K+ P+ ++ + F D +GEG FG V K + K + A+KR
Sbjct: 4 NRKVKNNPDPTIYPVLDWNDI-----KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKR 56
Query: 105 L-SVRSRQGLQELKNEALVIAKV-QHKNLVRLLGCCIERDEKLLIYEYLPNKSL-DF--- 158
+ S+ ++ E V+ K+ H N++ LLG C R L EY P+ +L DF
Sbjct: 57 MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 116
Query: 159 ---------FLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLD 209
F + L L + G+ YL S+ + IHR+L A NIL+
Sbjct: 117 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVG 173
Query: 210 KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY-----QGICSIKSDVFSFG 264
+ KI+DFG++R G E V T G +P ++ + + SDV+S+G
Sbjct: 174 ENYVAKIADFGLSR---GQEV-----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 225
Query: 265 MLLLEILS 272
+LL EI+S
Sbjct: 226 VLLWEIVS 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L F+ + +L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 31/206 (15%)
Query: 80 KLGEGGFGPVYKG------VLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG VYK VLA A K + +S + L++ E ++A H N+V+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQII-EGIVEGLLYLHLHS 192
LL + ++ E+ ++D + + +R L E +++Q++ + ++ L YLH +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN- 154
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+IIHRDLKA NIL + K++DFG++ K + GT ++ PE V
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVV--- 207
Query: 253 ICSI--------KSDVFSFGMLLLEI 270
+C K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 23/243 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSV---RSRQGLQELKNEALVIAKVQHK 129
NF K+G G F VY+ L G +A+K++ + + + E ++ ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGLLY 187
N+++ IE +E ++ E L + F KR++ E T + + L
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPE-RTVWKYFVQLCSALE- 150
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H+HSR R++HRD+K +N+ + K+ D G+ R F + A++ + GT Y+ PE
Sbjct: 151 -HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPE 206
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLA 307
+++ + KSD++S G LL E+ + + + FY D+ + S K +E C
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYG---------DKMNLYSLCKKIEQCDY 255
Query: 308 RPF 310
P
Sbjct: 256 PPL 258
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAK 125
+ NF K+GEG +G VYK G+ +A+K++ + + +G+ E ++ +
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ H N+V+LL ++ L++E++ ++ L F+ DA+ + L + +++GL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGL 119
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
+ H H R++HRDLK N+L++ E K++DFG+AR F G + + V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVV-TLWYRA 174
Query: 246 PEYVYQGIC---SIKSDVFSFGMLLLEILS 272
PE + C S D++S G + E+++
Sbjct: 175 PEILLG--CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 81 LGEGGFGPVYK----GVLAKGD--EIAVKRLSVRSRQGLQE-LKNEALVIAKV-QHKNLV 132
LG G FG V G+ G ++AVK L ++ +E L +E ++ ++ H+N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 133 RLLGCCIERDEKLLIYEYLPNKSL-------------DFFLFDATKRVLLELGTRLQIIE 179
LLG C LI+EY L D ++ KR+ E + E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 180 G-------IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
+ +G+ +L S +HRDL A N+L+ KI DFG+AR + +
Sbjct: 173 DLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE +++GI +IKSDV+S+G+LL EI S
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 31/206 (15%)
Query: 80 KLGEGGFGPVYKG------VLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+LG+G FG VYK VLA A K + +S + L++ E ++A H N+V+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQII-EGIVEGLLYLHLHS 192
LL + ++ E+ ++D + + +R L E +++Q++ + ++ L YLH +
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN- 154
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+IIHRDLKA NIL + K++DFG++ K + GT ++ PE V
Sbjct: 155 --KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVV--- 207
Query: 253 ICSI--------KSDVFSFGMLLLEI 270
+C K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 80
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HRDL A N ++ + KI DFGM R +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPV-YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V V + G +AVK++ +R +Q + L NE +++ QH+N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + +++ L LH +IH
Sbjct: 141 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 250 EVDIWSLGIMVIEMVDGE 267
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQEL-KNEALVIAKVQHKNLV 132
F+ K+G+G FG V+KG+ + ++ A+K + + + E + E V+++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
+ G ++ + +I EYL S D + L+ I+ I++GL YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRD+KA+N+LL + + K++DFG+A +++ N GT ++ PE + Q
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYH 281
K+D++S G+ +E+ G+ H
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELH 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 81 LGEGGFGPVYKGVLAKGDE--IAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLG-- 136
+G G +G VYKG L DE +AVK S +RQ KN + ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL---DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGD 76
Query: 137 ---CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL--- 190
R E LL+ EY PN SL +L T + + ++ + GL YLH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 191 ---HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGN-------ESKANTNRVAGT 240
H + I HRDL + N+L+ + ISDFG++ GN E A + V GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GT 191
Query: 241 FGYIPPEYVYQGICSIKS--------DVFSFGMLLLEIL 271
Y+ PE V +G +++ D+++ G++ EI
Sbjct: 192 IRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQEL-KNEALVIAKVQHKNLV 132
F+ K+G+G FG V+KG+ + ++ A+K + + + E + E V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
+ G ++ + +I EYL S D + L+ I+ I++GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+ IHRD+KA+N+LL + + K++DFG+A +++ N GT ++ PE + Q
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYH 281
K+D++S G+ +E+ G+ H
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHKNLV 132
+ K+GEG +G VYK ++G +A+KR+ + + +G+ E ++ ++ H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ------IIEGIVEGLL 186
L+ L++E++ K L K+VL E T LQ + ++ G+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDL--------KKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H RI+HRDLK N+L++ + K++DFG+AR F G ++ T+ V + P
Sbjct: 134 HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPD 189
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSGK 274
+ S D++S G + E+++GK
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSR-QGLQELK-NEALVIAKVQHKNLV 132
+ K+GEG +G VYK ++G +A+KR+ + + +G+ E ++ ++ H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ------IIEGIVEGLL 186
L+ L++E++ K L K+VL E T LQ + ++ G+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDL--------KKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
+ H H RI+HRDLK N+L++ + K++DFG+AR F G ++ T+ V + P
Sbjct: 134 HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPD 189
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSGK 274
+ S D++S G + E+++GK
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPV-YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V V + G +AVK++ +R +Q + L NE +++ QH+N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + +++ L LH +IH
Sbjct: 218 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 327 EVDIWSLGIMVIEMVDGE 344
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
K+GEG G V G ++AVK++ +R +Q + L NE +++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ DE ++ E+L +L D + + ++ L YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR--VAGTFGYIPPEYVYQGICSI 256
RD+K+ +ILL + + K+SDFG F SK R + GT ++ PE + +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG----FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 257 KSDVFSFGMLLLEILSGK 274
+ D++S G++++E++ G+
Sbjct: 221 EVDIWSLGIMVIEMIDGE 238
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 80 KLGEGGFGPVYKGVL---AKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+LG G FG V +GV K ++A+K L + + +E+ EA ++ ++ + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C + + +L+ E L FL KR + + +++ + G+ YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGI 253
+HRDL A N+LL KISDFG+++ ++S T R AG + + PE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRK 189
Query: 254 CSIKSDVFSFGMLLLEILS 272
S +SDV+S+G+ + E LS
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 80
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HR+L A N ++ + KI DFGM R + +
Sbjct: 141 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 80 KLGEGGFGPVYKG---VLAKGD---EIAVKRL----SVRSRQGLQELKNEALVIAKVQHK 129
+LG+G FG VY+G + KG+ +AVK + S+R R E NEA V+
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI---EFLNEASVMKGFTCH 81
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-------DATKRVLLELGTRLQIIEGIV 182
++VRLLG + L++ E + + L +L + R L +Q+ I
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ YL+ + +HR+L A N ++ + KI DFGM R + +
Sbjct: 142 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE + G+ + SD++SFG++L EI S
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 24/209 (11%)
Query: 81 LGEGGFGPVYKGVLA-KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+G G V A K +++A+KR+++ + + + EL E +++ H N+V
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVL---------LELGTRLQIIEGIVEGLLYLH 189
+ +DE L+ + L S+ D K ++ L+ T I+ ++EGL YLH
Sbjct: 83 VVKDELWLVMKLLSGGSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGM-ARIFKGNESKANTNR--VAGTFGYIPP 246
+ + IHRD+KA NILL ++ +I+DFG+ A + G + N R GT ++ P
Sbjct: 139 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 247 EYVYQ--GICSIKSDVFSFGMLLLEILSG 273
E + Q G K+D++SFG+ +E+ +G
Sbjct: 196 EVMEQVRGY-DFKADIWSFGITAIELATG 223
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 24/209 (11%)
Query: 81 LGEGGFGPVYKGVLA-KGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+G G V A K +++A+KR+++ + + + EL E +++ H N+V
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 77
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVL---------LELGTRLQIIEGIVEGLLYLH 189
+ +DE L+ + L S+ D K ++ L+ T I+ ++EGL YLH
Sbjct: 78 VVKDELWLVMKLLSGGSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGM-ARIFKGNESKANTNR--VAGTFGYIPP 246
+ + IHRD+KA NILL ++ +I+DFG+ A + G + N R GT ++ P
Sbjct: 134 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 247 EYVYQ--GICSIKSDVFSFGMLLLEILSG 273
E + Q G K+D++SFG+ +E+ +G
Sbjct: 191 EVMEQVRGY-DFKADIWSFGITAIELATG 218
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 45/233 (19%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQ 114
+F S A ++ + LG+G FG V +L K G E AVK +S V+ + +
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKE 77
Query: 115 ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---------LFDA-- 163
L E ++ ++ H N+++L YE+ +K + LFD
Sbjct: 78 SLLREVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEII 124
Query: 164 TKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFG 220
+++ E+ +II ++ G+ Y+H + +I+HRDLK N+LL+ + K +I DFG
Sbjct: 125 SRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG 180
Query: 221 MARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ F+ SK +++ GT YI PE V G K DV+S G++L +LSG
Sbjct: 181 LSTHFEA--SKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
LLG C + L++ YL +K +F + + L L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSV-RSRQGLQELK-NEALVIAKVQHKNLVRLLGC 137
K+GEG +G VYK G+ A+K++ + + +G+ E ++ +++H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 138 CIERDEKLLIYEYLPN---KSLDFF---LFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+ +L++E+L K LD L T + L LQ++ GI + H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA------YCH 117
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQ 251
R R++HRDLK N+L+++E + KI+DFG+AR F G + T+ V + P +
Sbjct: 118 DR-RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 252 GICSIKSDVFSFGMLLLEILSG 273
S D++S G + E+++G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 81 LGEGGFGPVYKGVLA--KGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
LGEG FG VY+GV KG++I V + + L ++ +EA+++ + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G IE + +I E P L +L + K L L L ++ I + + YL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQ-ICKAMAYLE---SIN 129
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ NIL+ K+ DFG++R + + KA+ R+ ++ PE +
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRRF 187
Query: 255 SIKSDVFSFGMLLLEILSGKKNTEFY 280
+ SDV+ F + + EILS K F+
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKG-VLAKGDEIAVKRLS---VRSRQGLQELKNEAL 121
SS +NF LG+G FG V V GD AVK L + ++ E
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR 75
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLL-IYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
+++ ++ + L CC + ++L + E++ L F + R E R E
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAE- 132
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
I+ L++LH II+RDLK N+LLD E K++DFGM + +G + T GT
Sbjct: 133 IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGT 187
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
YI PE + + + D ++ G+LL E+L G E
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 120
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ +T + GT Y
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT--LCGTLDY 173
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 81 LGEGGFGPVYKGVLAKG-----------DEIAVKRL-SVRSRQGLQELKNEALVIAKV-Q 127
LGEG FG V VLA+ ++AVK L S + + L +L +E ++ + +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTR-- 174
HKN++ LLG C + +I EY +L +L ++ + +L ++
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I + +SDV+SFG+LL EI +
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSV-RSRQGLQELK-NEALVIAKVQHKNLVRLLGC 137
K+GEG +G VYK G+ A+K++ + + +G+ E ++ +++H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 138 CIERDEKLLIYEYLPN---KSLDFF---LFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+ +L++E+L K LD L T + L LQ++ GI + H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA------YCH 117
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQ 251
R R++HRDLK N+L+++E + KI+DFG+AR F G + T+ V + P +
Sbjct: 118 DR-RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 252 GICSIKSDVFSFGMLLLEILSG 273
S D++S G + E+++G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 81 LGEGGFGPVYKGVLA--KGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
LGEG FG VY+GV KG++I V + + L ++ +EA+++ + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G IE + +I E P L +L + K L L L ++ I + + YL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQ-ICKAMAYLE---SIN 133
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ NIL+ K+ DFG++R + + KA+ R+ ++ PE +
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRRF 191
Query: 255 SIKSDVFSFGMLLLEILSGKKNTEFY 280
+ SDV+ F + + EILS K F+
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 81 LGEGGFGPVYKGVLA--KGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLL 135
LGEG FG VY+GV KG++I V + + L ++ +EA+++ + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G IE + +I E P L +L + K L L L ++ I + + YL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQ-ICKAMAYLE---SIN 145
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ NIL+ K+ DFG++R + + KA+ R+ ++ PE +
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRRF 203
Query: 255 SIKSDVFSFGMLLLEILSGKKNTEFY 280
+ SDV+ F + + EILS K F+
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P + L +K E T I E +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITE-LAN 124
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 177
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 120
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + ++GT Y
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDY 173
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 45/233 (19%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQ 114
+F S A ++ + LG+G FG V +L K G E AVK +S V+ + +
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKE 71
Query: 115 ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---------LFDA-- 163
L E ++ ++ H N+++L YE+ +K + LFD
Sbjct: 72 SLLREVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 164 TKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFG 220
+++ E+ +II ++ G+ Y+H + +I+HRDLK N+LL+ + K +I DFG
Sbjct: 119 SRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG 174
Query: 221 MARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ F+ SK +++ GT YI PE V G K DV+S G++L +LSG
Sbjct: 175 LSTHFEA--SKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSV-RSRQGLQELK-NEALVIAKVQHKNLVRLLGC 137
K+GEG +G VYK G+ A+K++ + + +G+ E ++ +++H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 138 CIERDEKLLIYEYLPN---KSLDFF---LFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+ +L++E+L K LD L T + L LQ++ GI + H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA------YCH 117
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQ 251
R R++HRDLK N+L+++E + KI+DFG+AR F G + T+ + + P +
Sbjct: 118 DR-RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 252 GICSIKSDVFSFGMLLLEILSG 273
S D++S G + E+++G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
LLG C + L++ YL +K +F + + L L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY---LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 116
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 169
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 124
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 177
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 122
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 175
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 66
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 123
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 176
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 118
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 171
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 122
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 175
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 45/233 (19%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQ 114
+F S A ++ + LG+G FG V +L K G E AVK +S V+ + +
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKE 95
Query: 115 ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---------LFDA-- 163
L E ++ ++ H N+++L YE+ +K + LFD
Sbjct: 96 SLLREVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEII 142
Query: 164 TKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFG 220
+++ E+ +II ++ G+ Y+H + +I+HRDLK N+LL+ + K +I DFG
Sbjct: 143 SRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG 198
Query: 221 MARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ F+ SK +++ GT YI PE V G K DV+S G++L +LSG
Sbjct: 199 LSTHFEA--SKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNE 119
S A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E
Sbjct: 5 SRQWALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIE 179
+ + ++H N++RL G + LI EY P ++ L +K E T I E
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE 119
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L Y H R+IHRD+K N+LL + KI+DFG + + + + + G
Sbjct: 120 -LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCG 171
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
T Y+PPE + + K D++S G+L E L GK E
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 45/233 (19%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQ 114
+F S A ++ + LG+G FG V +L K G E AVK +S V+ + +
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKE 94
Query: 115 ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---------LFDA-- 163
L E ++ ++ H N+++L YE+ +K + LFD
Sbjct: 95 SLLREVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEII 141
Query: 164 TKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFG 220
+++ E+ +II ++ G+ Y+H + +I+HRDLK N+LL+ + K +I DFG
Sbjct: 142 SRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFG 197
Query: 221 MARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ F+ SK +++ GT YI PE V G K DV+S G++L +LSG
Sbjct: 198 LSTHFEA--SKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLS--VRSRQGLQ-ELKNEALVIA 124
A N+ LGEG FG V G ++A+K ++ V ++ +Q ++ E +
Sbjct: 9 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 68
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++H ++++L +DE +++ EY N+ D+ + +R + + + I+
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISA 124
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF-KGNESKANTNRVAGTFGY 243
+ Y H H +I+HRDLK N+LLD+ + KI+DFG++ I GN K + G+ Y
Sbjct: 125 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNY 177
Query: 244 IPPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
PE + + + DV+S G++L +L
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 66 SSVA--AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLS--VRSRQGLQ-ELKNE 119
SS+A A N+ LGEG FG V G ++A+K ++ V ++ +Q ++ E
Sbjct: 5 SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 64
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIE 179
+ ++H ++++L +DE +++ EY N+ D+ + +R + + +
Sbjct: 65 ISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQ 120
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF-KGNESKANTNRVA 238
I+ + Y H H +I+HRDLK N+LLD+ + KI+DFG++ I GN K +
Sbjct: 121 QIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----C 173
Query: 239 GTFGYIPPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
G+ Y PE + + + DV+S G++L +L
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 79
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 136
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 137 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 189
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P + L +K E T I E +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITE-LAN 124
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDY 177
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 79 NKLGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKNLVRLLG 136
+KLGEG + VYKG D +A+K + + +G E ++ ++H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
L++EYL +K L +L D + + +L + + ++ GL Y H R ++
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFLFQ-LLRGLAYCH---RQKV 121
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGI-CS 255
+HRDLK N+L+++ + K++DFG+AR K +K N V T Y PP+ + S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVV-TLWYRPPDILLGSTDYS 179
Query: 256 IKSDVFSFGMLLLEILSGK 274
+ D++ G + E+ +G+
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Query: 64 SFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-EL 116
+ S A +F LG+G FG VY LA+ + +A+K L + + G++ +L
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 117 KNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ 176
+ E + + ++H N++RL G + LI EY P ++ L +K E T
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATY 116
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
I E + L Y H R+IHRD+K N+LL + KI+DFG + + A
Sbjct: 117 ITE-LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---- 168
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+ GT Y+PPE + + K D++S G+L E L GK E
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLS--VRSRQGLQ-ELKNEALVIA 124
A N+ LGEG FG V G ++A+K ++ V ++ +Q ++ E +
Sbjct: 4 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 63
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++H ++++L +DE +++ EY N+ D+ + +R + + + I+
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISA 119
Query: 185 LLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF-KGNESKANTNRVAGTFGY 243
+ Y H H +I+HRDLK N+LLD+ + KI+DFG++ I GN K + G+ Y
Sbjct: 120 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNY 172
Query: 244 IPPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
PE + + + DV+S G++L +L
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQG-----LQELKNEALV-- 122
AT+ + ++G G +G VYK G +A+K SVR G + ++ AL+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 123 IAKVQHKNLVRLLGCC----IERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
+ +H N+VRL+ C +R+ K+ L++E++ ++ L +L D L T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDL 117
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
+ + GL +LH + I+HRDLK NIL+ K++DFG+ARI+ + A V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---V 171
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T Y PE + Q + D++S G + E+ K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + NT
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLS--VRSRQGLQ-ELKNEALVIAK 125
A N+ LGEG FG V G ++A+K ++ V ++ +Q ++ E +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H ++++L +DE +++ EY N+ D+ + +R + + + I+ +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAV 116
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF-KGNESKANTNRVAGTFGYI 244
Y H H +I+HRDLK N+LLD+ + KI+DFG++ I GN K + G+ Y
Sbjct: 117 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYA 169
Query: 245 PPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
PE + + + DV+S G++L +L
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 120
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 173
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 145
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 198
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 53/299 (17%)
Query: 60 LPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNE 119
LPL ++A ++G+G +G V+ G +G+++AVK + + + + E
Sbjct: 27 LPLLVQRTIA---KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVK-VFFTTEEASWFRETE 81
Query: 120 ALVIAKVQHKNLVRLLGCCIE----RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL 175
++H+N++ + I+ + LI +Y N SL +D K L+ + L
Sbjct: 82 IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSML 137
Query: 176 QIIEGIVEGLLYLHL-----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF--KGN 228
++ V GL +LH + I HRDLK+ NIL+ K I+D G+A F N
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGI------CSIKSDVFSFGMLLLEI----LSGKKNTE 278
E N GT Y+PPE + + + I +D++SFG++L E+ +SG E
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
Query: 279 F---YHTGYLSINGYDQTQVASKIKLVESCLARPFRQYCCILKVRTFGFNLPNALNQSE 334
+ YH S Y+ R+ CI K+R + PN + E
Sbjct: 258 YQLPYHDLVPSDPSYED-----------------MREIVCIKKLRP---SFPNRWSSDE 296
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 124
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 177
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 122
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDY 175
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 145
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + + GT Y
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDY 198
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVLLELGTRLQIIE--- 179
LLG C + L++ YL +K +F + + + + T +I
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + A + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 23/218 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQG-----LQELKNEALV-- 122
AT+ + ++G G +G VYK G +A+K SVR G + ++ AL+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 123 IAKVQHKNLVRLLGCC----IERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
+ +H N+VRL+ C +R+ K+ L++E++ ++ L +L D L T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDL 117
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
+ + GL +LH + I+HRDLK NIL+ K++DFG+ARI+ + + V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPV 171
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T Y PE + Q + D++S G + E+ K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 121
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + + + + GT Y
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDY 174
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 124
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT--LCGTLDY 177
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + K D++S G+L E L GK E
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+F + +G GGFG V+K G ++R+ + + +E+K +AK+ H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIV 68
Query: 133 RLLGCCI-------ERDEKLLIYEYLPNKSLD---------FFLFDATKRVLLELGTR-- 174
GC D+ L +Y P S + F + + LE
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 175 ----------LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARI 224
L++ E I +G+ Y+H ++IHRDLK SNI L + KI DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 225 FKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
K + R GT Y+ PE + + D+++ G++L E+L
Sbjct: 186 LKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 133 RLLGCCIERDEKLLIY------------------EYLPNKSLDFFLFDATKRVLLELGTR 174
LLG C + L++ E++P K D + + L L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLY------KDFLTLEHL 150
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
+ + +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRS---RQGLQ-ELKNEALVIAKVQH 128
++F LG+G FG VY K I ++ +S ++G++ +L+ E + A + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N++RL +R LI EY P L + K + I+E + + L+Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGEL---YKELQKSCTFDEQRTATIMEELADALMYC 139
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEY 248
H ++IHRD+K N+LL + + KI+DFG + + + GT Y+PPE
Sbjct: 140 H---GKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEM 192
Query: 249 VYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+ + + K D++ G+L E+L G E
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 23/261 (8%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI----AVKRLSVRSRQGLQELKNEALV 122
+ +F LG+G FG V+ K ++ A+K+ V ++ E V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 123 IAKVQHKNLVRLLGCCIERDEKLL-IYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGI 181
++ + + C + E L + EYL L + + K +L I
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEI 128
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
+ GL +LH I++RDLK NILLDK+ KI+DFGM + + A TN GT
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTP 183
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKL 301
YI PE + + D +SFG+LL E+L G+ +G D+ ++ I++
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS----------PFHGQDEEELFHSIRM 233
Query: 302 VESCLARPFRQYCCILKVRTF 322
R + L V+ F
Sbjct: 234 DNPFYPRWLEKEAKDLLVKLF 254
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 24/235 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQH 128
T+ + +G+G F V + V L G E A K ++ + S + Q+L+ EA + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+VRL E L+++ + L D R I+ I+E +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H ++ ++HRDLK N+LL + K K++DFG+A +G++ AGT GY+
Sbjct: 120 H---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
PE + + D+++ G++L +L GY DQ ++ +IK
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILL----------VGYPPFWDEDQHKLYQQIK 219
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 113/231 (48%), Gaps = 49/231 (21%)
Query: 68 VAAATNNFSDTNK----LGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQEL 116
V +T FSD K LG+G FG V +L K G E AVK +S V+ + + L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 117 KNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---------LFDA--TK 165
E ++ ++ H N+ +L YE+ +K + LFD ++
Sbjct: 74 LREVQLLKQLDHPNIXKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISR 120
Query: 166 RVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMA 222
+ E+ +II ++ G+ Y H + +I+HRDLK N+LL+ + K +I DFG++
Sbjct: 121 KRFSEVDA-ARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Query: 223 RIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
F+ SK +++ GT YI PE V G K DV+S G++L +LSG
Sbjct: 177 THFEA--SKKXKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVY---------KGVLAKGDEIAVKRLSVRSRQGLQELK 117
S A ++F LG+G FG V+ G L + L VR R K
Sbjct: 22 SEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV---RTK 78
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
E ++A V H +V+L + LI ++L + D F + + + E + +
Sbjct: 79 MERDILADVNHPFVVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
E + GL HLHS + II+RDLK NILLD+E K++DFG+++ +E KA +
Sbjct: 137 AE-LALGLD--HLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--F 190
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
GT Y+ PE V + S +D +S+G+L+ E+L+G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 80 KLGEGGFGPVYKGVL---AKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNLVRLL 135
+LG G FG V +GV K ++A+K L + + +E+ EA ++ ++ + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G C + + +L+ E L FL KR + + +++ + G+ YL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYL---EEKN 456
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG--YIPPEYVYQGI 253
+HR+L A N+LL KISDFG+++ ++S T R AG + + PE +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRK 515
Query: 254 CSIKSDVFSFGMLLLEILS 272
S +SDV+S+G+ + E LS
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS---VRSRQGLQELKNEALVIAKVQH 128
N+FS +G GGFG VY A G A+K L ++ +QG NE ++++ V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 129 KN--LVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ + + +KL I + + L + L + V E R E I+ GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAE-IILGL 305
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H+H+R +++RDLK +NILLD+ +ISD G+A F SK + GT GY+
Sbjct: 306 E--HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMA 358
Query: 246 PEYVYQGICSIKS-DVFSFGMLLLEILSG 273
PE + +G+ S D FS G +L ++L G
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS---VRSRQGLQELKNEALVIAKVQH 128
N+FS +G GGFG VY A G A+K L ++ +QG NE ++++ V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 129 KN--LVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ + + +KL I + + L + L + V E R E I+ GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAE-IILGL 305
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H+H+R +++RDLK +NILLD+ +ISD G+A F SK + GT GY+
Sbjct: 306 E--HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMA 358
Query: 246 PEYVYQGICSIKS-DVFSFGMLLLEILSG 273
PE + +G+ S D FS G +L ++L G
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 81 LGEGGFGPVYKGVLAKGDEI----AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+G FG V+ K ++ A+K+ V ++ E V++ + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 137 CCIERDEKLL-IYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
C + E L + EYL L + + K +L I+ GL +LH
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKG--- 138
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
I++RDLK NILLDK+ KI+DFGM + + A TN GT YI PE + +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 256 IKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARPFRQYCC 315
D +SFG+LL E+L G+ +G D+ ++ I++ R +
Sbjct: 197 HSVDWWSFGVLLYEMLIGQS----------PFHGQDEEELFHSIRMDNPFYPRWLEKEAK 246
Query: 316 ILKVRTF 322
L V+ F
Sbjct: 247 DLLVKLF 253
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG--LQELKNEALVIAKVQHKNLVRLLGCC 138
+G G FG V K + ++A+K++ S + + EL+ +++V H N+V+L G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNIVKLYGAC 70
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ + L+ EY SL L A + +G+ YLH +IH
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 199 RDLKASNILL-DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIK 257
RDLK N+LL KI DFG A + + + G+ ++ PE S K
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 258 SDVFSFGMLLLEILSGKK 275
DVFS+G++L E+++ +K
Sbjct: 184 CDVFSWGIILWEVITRRK 201
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS---VRSRQGLQELKNEALVIAKVQH 128
N+FS +G GGFG VY A G A+K L ++ +QG NE ++++ V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 129 KN--LVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ + + +KL I + + L + L + V E R E I+ GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAE-IILGL 305
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H+H+R +++RDLK +NILLD+ +ISD G+A F SK + GT GY+
Sbjct: 306 E--HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMA 358
Query: 246 PEYVYQGICSIKS-DVFSFGMLLLEILSG 273
PE + +G+ S D FS G +L ++L G
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS---VRSRQGLQELKNEALVIAKVQH 128
N+FS +G GGFG VY A G A+K L ++ +QG NE ++++ V
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 129 KN--LVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+ + + +KL I + + L + L + V E R E I+ GL
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAE-IILGL 304
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H+H+R +++RDLK +NILLD+ +ISD G+A F SK + GT GY+
Sbjct: 305 E--HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDF----SKKKPHASVGTHGYMA 357
Query: 246 PEYVYQGICSIKS-DVFSFGMLLLEILSG 273
PE + +G+ S D FS G +L ++L G
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG--LQELKNEALVIAKVQHKNLVRLLGCC 138
+G G FG V K + ++A+K++ S + + EL+ +++V H N+V+L G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNIVKLYGAC 71
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ + L+ EY SL L A + +G+ YLH +IH
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 199 RDLKASNILL-DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIK 257
RDLK N+LL KI DFG A + + + G+ ++ PE S K
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 258 SDVFSFGMLLLEILSGKK 275
DVFS+G++L E+++ +K
Sbjct: 185 CDVFSWGIILWEVITRRK 202
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 121
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI++FG + S+ T + GT Y
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT--LCGTLDY 174
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ + +A+K L + + G++ +L+ E +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 122
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H R+IHRD+K N+LL + KI++FG + S+ T + GT Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT--LCGTLDY 175
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 84 GGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGC-----C 138
G FG V+K L + +AVK ++ +Q Q + E + ++H+N+++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH------- 191
++ D LI + SL FL K ++ I E + GL YLH
Sbjct: 93 VDVD-LWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-- 249
+ I HRD+K+ N+LL + I+DFG+A F+ +S +T+ GT Y+ PE +
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 250 ---YQGICSIKSDVFSFGMLLLEILS 272
+Q ++ D+++ G++L E+ S
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
++LG+G FG V Y + G +AVK+L ++ + E ++ + +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G R E L+ EYLP+ L FL R L+ L I +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG-- 128
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT--FGYIPPEYV 249
SR R +HRDL A NIL++ E KI+DFG+A++ ++ + F Y PE +
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESL 186
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
I S +SDV+SFG++L E+ +
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 24/228 (10%)
Query: 79 NKLGEGGFGPVYKGV-LAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLL 135
+LG+G F V + V + G E A K ++ + S + Q+L+ EA + ++H N+VRL
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
E LI++ + L D R I+ I+E +L+ H ++
Sbjct: 88 DSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCH---QMG 141
Query: 196 IIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
++HRDLK N+LL ++K K++DFG+A +G E +A AGT GY+ PE + +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFG-FAGTPGYLSPEVLRKD 199
Query: 253 ICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
D+++ G++L +L GY DQ ++ +IK
Sbjct: 200 PYGKPVDLWACGVILYILL----------VGYPPFWDEDQHRLYQQIK 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 133 RLLGCCIERDEKLLIYE----------YLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGDE---IAVKRLSVRSRQGLQE-LKNEALVIAK 125
N S LG G FG V + L K D +AVK L + +E L +E V++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSL--------DFFLFDATKRVLLELGTRLQ 176
+ H N+V LLG C L+I EY L D F+ T ++E
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 177 IIEG-------IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE 229
+E + +G+ +L + IHRDL A NILL KI DFG+AR K +
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 230 SKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE ++ + + +SDV+S+G+ L E+ S
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGDE---IAVKRLSVRSRQGLQE-LKNEALVIAK 125
N S LG G FG V + L K D +AVK L + +E L +E V++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSL--------DFFLFDATKRVLLELGTRLQ 176
+ H N+V LLG C L+I EY L D F+ T ++E
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 177 IIEG-------IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE 229
+E + +G+ +L + IHRDL A NILL KI DFG+AR K +
Sbjct: 159 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 230 SKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE ++ + + +SDV+S+G+ L E+ S
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 73 NNFSDTNKLGEGGFGPVY-----KGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQ 127
+F LG G FG V+ ++ K + VR +Q ++ +E L+++ V
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-VEHTNDERLMLSIVT 64
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
H ++R+ G + + +I +Y+ L F L ++R + + E + L Y
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPNPVA-KFYAAE-VCLALEY 121
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
LH II+RDLK NILLDK KI+DFG A+ T + GT YI PE
Sbjct: 122 LHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPE 173
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHT 282
V + D +SFG+L+ E+L+G T FY +
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDS 206
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGDE---IAVKRLSVRSRQGLQE-LKNEALVIAK 125
N S LG G FG V + L K D +AVK L + +E L +E V++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSL--------DFFLFDATKRVLLELGTRLQ 176
+ H N+V LLG C L+I EY L D F+ T ++E
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 177 IIEG-------IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE 229
+E + +G+ +L + IHRDL A NILL KI DFG+AR K +
Sbjct: 161 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 230 SKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE ++ + + +SDV+S+G+ L E+ S
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGDE---IAVKRLSVRSRQGLQE-LKNEALVIAK 125
N S LG G FG V + L K D +AVK L + +E L +E V++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSL--------DFFLFDATKRVLLELGTRLQ 176
+ H N+V LLG C L+I EY L D F+ T ++E
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 177 IIEG-------IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE 229
+E + +G+ +L + IHRDL A NILL KI DFG+AR K +
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 230 SKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE ++ + + +SDV+S+G+ L E+ S
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQG-----LQELKNEALV-- 122
AT+ + ++G G +G VYK G +A+K SVR G + ++ AL+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 123 IAKVQHKNLVRLLGCC----IERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
+ +H N+VRL+ C +R+ K+ L++E++ ++ L +L D L T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDL 117
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
+ + GL +LH + I+HRDLK NIL+ K++DFG+ARI+ + V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPV 171
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T Y PE + Q + D++S G + E+ K
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV---LAKGDE---IAVKRLSVRSRQGLQE-LKNEALVIAK 125
N S LG G FG V + L K D +AVK L + +E L +E V++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 126 V-QHKNLVRLLGCCIERDEKLLIYEYLPNKSL--------DFFLFDATKRVLLELGTRLQ 176
+ H N+V LLG C L+I EY L D F+ T ++E
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 177 IIEG-------IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE 229
+E + +G+ +L + IHRDL A NILL KI DFG+AR K +
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 230 SKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
+ ++ PE ++ + + +SDV+S+G+ L E+ S
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 26/237 (10%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGVLAKGDEI-------AVKRLSVRSRQGLQELKNEALV 122
A + F LG+G FG V+ G + +K+ +++ R ++ K E +
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDI 79
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
+ +V H +V+L + LI ++L + D F + + + E + + E
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE--- 134
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
L HLHS + II+RDLK NILLD+E K++DFG+++ +E KA + GT
Sbjct: 135 LALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 191
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKI 299
Y+ PE V + + +D +SFG+L+ E+L TG L G D+ + + I
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEML----------TGTLPFQGKDRKETMTMI 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 101/238 (42%), Gaps = 23/238 (9%)
Query: 80 KLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNLV 132
KLG+G FG V +G K +AVK L + + + + E + + H+NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL---E 132
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK-ANTNRVAGTFGYIPPEYVYQ 251
R IHRDL A N+LL KI DFG+ R N+ F + PE +
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 252 GICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 241
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 26/237 (10%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGVLAKGDEI-------AVKRLSVRSRQGLQELKNEALV 122
A + F LG+G FG V+ G + +K+ +++ R ++ K E +
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDI 79
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
+ +V H +V+L + LI ++L + D F + + + E + + E
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE--- 134
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
L HLHS + II+RDLK NILLD+E K++DFG+++ +E KA + GT
Sbjct: 135 LALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 191
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKI 299
Y+ PE V + + +D +SFG+L+ E+L TG L G D+ + + I
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEML----------TGTLPFQGKDRKETMTMI 238
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 79 NKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNL 131
KLG+G FG V +G K +AVK L + + + + E + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL--- 127
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA--NTNRVAGTFGYIPPEYV 249
R IHRDL A N+LL KI DFG+ R N+ +R F + PE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 186
Query: 250 YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 237
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 79 NKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNL 131
KLG+G FG V +G K +AVK L + + + + E + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL--- 137
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA--NTNRVAGTFGYIPPEYV 249
R IHRDL A N+LL KI DFG+ R N+ +R F + PE +
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 196
Query: 250 YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 247
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 26/237 (10%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGVLAKGDEI-------AVKRLSVRSRQGLQELKNEALV 122
A + F LG+G FG V+ G + +K+ +++ R ++ K E +
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDI 80
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIV 182
+ +V H +V+L + LI ++L + D F + + + E + + E
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE--- 135
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
L HLHS + II+RDLK NILLD+E K++DFG+++ +E KA + GT
Sbjct: 136 LALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVE 192
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKI 299
Y+ PE V + + +D +SFG+L+ E+L TG L G D+ + + I
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEML----------TGTLPFQGKDRKETMTMI 239
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVI 123
A +F LG+G FG VY LA+ +A+K L + + G++ +L+ E +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVE 183
+ ++H N++RL G + LI EY P ++ L +K E T I E +
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITE-LAN 119
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
L Y H ++IHRD+K N+LL + KI+DFG + + A + GT Y
Sbjct: 120 ALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LCGTLDY 172
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
+PPE + + K D++S G+L E L GK E
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 79 NKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNL 131
KLG+G FG V +G K +AVK L + + + + E + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL--- 131
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK-ANTNRVAGTFGYIPPEYVY 250
R IHRDL A N+LL KI DFG+ R N+ F + PE +
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 241
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 79 NKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNL 131
KLG+G FG V +G K +AVK L + + + + E + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL--- 127
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK-ANTNRVAGTFGYIPPEYVY 250
R IHRDL A N+LL KI DFG+ R N+ F + PE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 237
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 80 KLGEGGFGPVY-KGVLAKGDEIAVKRLSV-RSRQGLQELKNEALVIAKVQHKNLVRLLGC 137
KLG G FG V+ + G E +K ++ RS+ +++++ E V+ + H N++++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDATKR-VLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ ++ E L + A R L G ++++ ++ L Y H +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HV 145
Query: 197 IHRDLKASNILLDKEMKP----KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG 252
+H+DLK NIL ++ P KI DFG+A +FK +E N AGT Y+ PE V++
Sbjct: 146 VHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN---AAGTALYMAPE-VFKR 200
Query: 253 ICSIKSDVFSFGMLLLEILSG 273
+ K D++S G+++ +L+G
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVR----SRQGL--QELKNEALVIAK 125
+++ +LG G F V K G E A K + R SR+G+ +E++ E ++ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N++ L + + +LI E + L F F A K L E Q ++ I++G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTE-DEATQFLKQILDGV 128
Query: 186 LYLHLHSRVRIIHRDLKASNI-LLDKEM-KPKIS--DFGMA-RIFKGNESKANTNRVAGT 240
YLH RI H DLK NI LLDK + P+I DFG+A +I GNE K + GT
Sbjct: 129 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGT 181
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ PE V +++D++S G++ +LSG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 79 NKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNL 131
KLG+G FG V +G K +AVK L + + + + E + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL--- 137
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK--ANTNRVAGTFGYIPPEYV 249
R IHRDL A N+LL KI DFG+ R N+ +R F + PE +
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 196
Query: 250 YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 247
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 79 NKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAKVQHKNL 131
KLG+G FG V +G K +AVK L + + + + E + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+RL G + K+ + E P SL L LL GT + + EG+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYL--- 127
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK-ANTNRVAGTFGYIPPEYVY 250
R IHRDL A N+LL KI DFG+ R N+ F + PE +
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 251 QGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIKLVESCLARP 309
S SD + FG+ L E+ + + ++ +NG +Q+ KI L RP
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT------YGQEPWIGLNG---SQILHKIDKEGERLPRP 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVR----SRQGL--QELKNEALVIAK 125
+++ +LG G F V K G E A K + R SR+G+ +E++ E ++ +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N++ L + + +LI E + L F F A K L E Q ++ I++G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTE-DEATQFLKQILDGV 121
Query: 186 LYLHLHSRVRIIHRDLKASNI-LLDKEM-KPKIS--DFGMA-RIFKGNESKANTNRVAGT 240
YLH RI H DLK NI LLDK + P+I DFG+A +I GNE K + GT
Sbjct: 122 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGT 174
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ PE V +++D++S G++ +LSG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 81 LGEGGFGPVYK-GVLAKGDEIAVKRLSVRS--RQGLQELKNEALVIAKVQHKNLVRLLGC 137
LG+G FG V K E AVK ++ S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDAT-KRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ ++ E L FD KR +II+ + G+ Y+H H+ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 197 IHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGI 253
+HRDLK NILL+ + K KI DFG++ F+ N +R+ GT YI PE V +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRI-GTAYYIAPE-VLRGT 198
Query: 254 CSIKSDVFSFGMLLLEILSG 273
K DV+S G++L +LSG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVR----SRQGL--QELKNEALVIAK 125
+++ +LG G F V K G E A K + R SR+G+ +E++ E ++ +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N++ L + + +LI E + L F F A K L E Q ++ I++G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTE-DEATQFLKQILDGV 142
Query: 186 LYLHLHSRVRIIHRDLKASNI-LLDKEM-KPKIS--DFGMA-RIFKGNESKANTNRVAGT 240
YLH RI H DLK NI LLDK + P+I DFG+A +I GNE K + GT
Sbjct: 143 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGT 195
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
++ PE V +++D++S G++ +LSG
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 133 RLLGCCIERDEKLLIYE----------YLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 125
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 126 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 178
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQ------GLQELKNEALV- 122
AT+ + ++G G +G VYK G +A+K + V + + ++ AL+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 123 -IAKVQHKNLVRLLGCC----IERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQ 176
+ +H N+VRL+ C +R+ K+ L++E++ ++ L +L D L T
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
++ + GL +LH + I+HRDLK NIL+ K++DFG+ARI+ +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALTP 178
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
V T Y PE + Q + D++S G + E+ K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQE-LKNEALVIAKVQHKN 130
+F LG GGFG V++ D A+KR+ + +R+ +E + E +AK++H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-------------RVLLELGTR--- 174
+VR +E++ E L S +L+ + R +E R
Sbjct: 65 IVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK--- 231
L I I E + +LH ++HRDLK SNI + K+ DFG+ +E +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 232 -------ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
A GT Y+ PE ++ S K D+FS G++L E+L
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+F + +G GGFG V+K G +KR+ + + +E+K +AK+ H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIV 67
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLEL-----GT-------------- 173
GC ++Y P S TK + +++ GT
Sbjct: 68 HYNGCWDG-------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 174 ---RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
L++ E I +G+ Y+H ++I+RDLK SNI L + KI DFG+ K +
Sbjct: 121 KVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-- 175
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
R GT Y+ PE + + D+++ G++L E+L
Sbjct: 176 -GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 133 RLLGCCIERDEKLLIYE----------YLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVIAK 125
+F LG+G FG VY LA+ + +A+K L + + G++ +L+ E + +
Sbjct: 12 EDFDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N++RL G + LI EY P ++ L ++ E T I E + L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITE-LANAL 125
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
Y H R+IHRD+K N+LL + KI+DFG + S+ +T + GT Y+P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT--LCGTLDYLP 178
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSG 273
PE + + K D++S G+L E L G
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 30/238 (12%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLAKGDE------IAVKRLSVRSRQGLQELKNEALVIAK 125
T+++ +LG+G F V + V + I K+LS R Q +L+ EA +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRL 86
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N+VRL E L+++ + L D R I I+E +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILESV 143
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFG 242
++H H I+HRDLK N+LL + K K++DFG+A +G E +A AGT G
Sbjct: 144 NHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG-EQQAWFG-FAGTPG 198
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
Y+ PE + + D+++ G++L +L GY DQ ++ +IK
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILL----------VGYPPFWDEDQHKLYQQIK 246
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 125
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 126 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 178
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 101/188 (53%), Gaps = 33/188 (17%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQ------GLQELKNEALVIAKVQHKNLV 132
K+G+G FG V+K K G ++A+K++ + + + L+E+K ++ ++H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL----------QIIEGIV 182
L+ C + Y K+ + +FD + L L + + ++++ ++
Sbjct: 81 NLIEICRTKASP-----YNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF---KGNESKANTNRVAG 239
GL Y+H R +I+HRD+KA+N+L+ ++ K++DFG+AR F K ++ NRV
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 240 TFGYIPPE 247
T Y PPE
Sbjct: 192 TLWYRPPE 199
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF ++ A E+ ++ +S +++ E + + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ L E R + + IV G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 138
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI 256
IHRDLK N+ L+++++ KI DFG+A + + + T + GT YI PE + + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 257 KSDVFSFGMLLLEILSGKKNTE 278
+ DV+S G ++ +L GK E
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF ++ A E+ ++ +S +++ E + + H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ L E R + + IV G YLH R R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 142
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI 256
IHRDLK N+ L+++++ KI DFG+A + + + T + GT YI PE + + S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 257 KSDVFSFGMLLLEILSGKKNTE 278
+ DV+S G ++ +L GK E
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF ++ A E+ ++ +S +++ E + + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ L E R + + IV G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 138
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI 256
IHRDLK N+ L+++++ KI DFG+A + + + T + GT YI PE + + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 257 KSDVFSFGMLLLEILSGKKNTE 278
+ DV+S G ++ +L GK E
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 41 IELSNKANNRRKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI 100
IE +A N R+S K +S + +F +G G + V L K D I
Sbjct: 30 IEEEKEAMNTRESGK----------ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRI 79
Query: 101 ----AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLL-IYEYLPNKS 155
VK+ V + + ++ E V + + + L C + + +L + EY+
Sbjct: 80 YAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD 139
Query: 156 LDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPK 215
L F + +R L E R E I L YLH II+RDLK N+LLD E K
Sbjct: 140 LMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIK 193
Query: 216 ISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
++D+GM + +G T+ GT YI PE + D ++ G+L+ E+++G+
Sbjct: 194 LTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 30/238 (12%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIA-----VKRLSVRSRQGLQELKNEALVIAK 125
T + +LG+G F V + V + G E A K+LS R Q +L+ EA +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRL 66
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N+VRL E LI++ + L D R I+ I+E +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFG 242
L+ H ++ ++HR+LK N+LL ++K K++DFG+A +G + AGT G
Sbjct: 124 LHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPG 178
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
Y+ PE + + D+++ G++L +L GY DQ ++ +IK
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILL----------VGYPPFWDEDQHRLYQQIK 226
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 148
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 81 LGEGGFGPVYK-GVLAKGDEIAVKRLSVRS--RQGLQELKNEALVIAKVQHKNLVRLLGC 137
LG+G FG V K E AVK ++ S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDAT-KRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ ++ E L FD KR +II+ + G+ Y+H H+ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 197 IHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGI 253
+HRDLK NILL +K+ KI DFG++ F+ N +R+ GT YI PE V +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRI-GTAYYIAPE-VLRGT 198
Query: 254 CSIKSDVFSFGMLLLEILSG 273
K DV+S G++L +LSG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 81 LGEGGFGPVYK-GVLAKGDEIAVKRLSVRS--RQGLQELKNEALVIAKVQHKNLVRLLGC 137
LG+G FG V K E AVK ++ S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 138 CIERDEKLLIYEYLPNKSLDFFLFDAT-KRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ ++ E L FD KR +II+ + G+ Y+H H+ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 197 IHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGI 253
+HRDLK NILL +K+ KI DFG++ F+ N +R+ GT YI PE V +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--DRI-GTAYYIAPE-VLRGT 198
Query: 254 CSIKSDVFSFGMLLLEILSG 273
K DV+S G++L +LSG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 33/188 (17%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQ------GLQELKNEALVIAKVQHKNLV 132
K+G+G FG V+K K G ++A+K++ + + + L+E+K ++ ++H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL----------QIIEGIV 182
L+ C + Y K + +FD + L L + + ++++ ++
Sbjct: 81 NLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF---KGNESKANTNRVAG 239
GL Y+H R +I+HRD+KA+N+L+ ++ K++DFG+AR F K ++ NRV
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 240 TFGYIPPE 247
T Y PPE
Sbjct: 192 TLWYRPPE 199
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + +I+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLF-DATKRVLLELGTRLQIIE-- 179
LLG C + L++ YL +K +F + +A + + + T +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 180 -GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 207
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 33/188 (17%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQ------GLQELKNEALVIAKVQHKNLV 132
K+G+G FG V+K K G ++A+K++ + + + L+E+K ++ ++H+N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 79
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL----------QIIEGIV 182
L+ C + Y K + +FD + L L + + ++++ ++
Sbjct: 80 NLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF---KGNESKANTNRVAG 239
GL Y+H R +I+HRD+KA+N+L+ ++ K++DFG+AR F K ++ NRV
Sbjct: 135 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 190
Query: 240 TFGYIPPE 247
T Y PPE
Sbjct: 191 TLWYRPPE 198
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 153
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQGLQ-ELKNEALVIAK 125
+F LG+G FG VY LA+ + +A+K L + + G++ +L+ E + +
Sbjct: 12 EDFDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
++H N++RL G + LI EY P L + K + I + L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
Y H R+IHRD+K N+LL + KI+DFG + S+ T + GT Y+P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTT--LCGTLDYLP 178
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSG 273
PE + + K D++S G+L E L G
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKR-LSVRS-RQGLQELKNEALV------IAKVQHKNLV 132
LG G FG V + D+ A R ++V+ ++G ++ AL+ I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 133 RLLGCCIERDEKLLIY----------EYLPNKSLDFFLFDATKRVL----LELGTRLQII 178
LLG C + L++ YL +K +F + L L L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 179 EGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
+ +G+ +L + + IHRDL A NILL ++ KI DFG+AR +
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + +I+SDV+SFG+LL EI S
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I EY +L +L +D RV E T ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 150
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKV-QHKNLVRLLGCCI 139
+G G +G VYKG K ++A ++ + +E+K E ++ K H+N+ G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 140 ER------DEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
++ D+ L+ E+ S+ + + L E I I+ GL +LH H
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-ICREILRGLSHLHQH-- 148
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY--- 250
++IHRD+K N+LL + + K+ DFG++ + NT GT ++ PE +
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMAPEVIACDE 205
Query: 251 --QGICSIKSDVFSFGMLLLEILSG 273
KSD++S G+ +E+ G
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Query: 73 NNFSDT-NKLGEGGFGPVYK-----GVLAKGDEIAVKRLSVRSRQGL--QELKNEALVIA 124
+++ DT +LG G F V K L + KR + SR+G+ ++++ E ++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
++QH N++ L + + +LI E + L F F A K L E + ++ I+ G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGEL--FDFLAEKESLTE-EEATEFLKQILNG 126
Query: 185 LLYLHLHSRVRIIHRDLKASNI-LLDKEM-KP--KISDFGMA-RIFKGNESKANTNRVAG 239
+ YLH ++I H DLK NI LLD+ + KP KI DFG+A +I GNE K + G
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFG 179
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T ++ PE V +++D++S G++ +LSG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 26/223 (11%)
Query: 63 FSFSSVAAAT--NNFSDTNKLGEGGFGPVYKGVLAKGDE-IAVKRLSV-RSRQGLQELK- 117
S S+ +AT + + KLGEG +G VYK + +E +A+KR+ + +G+
Sbjct: 22 MSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI 81
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKL-LIYEYLPNKSLDFFL--FDATKRVLLELGTR 174
E ++ ++QH+N++ L I + +L LI+EY N + D + RV+
Sbjct: 82 REVSLLKELQHRNIIE-LKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSF--L 138
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILL---DKEMKP--KISDFGMARIFKGNE 229
Q+I G+ HSR R +HRDLK N+LL D P KI DFG+AR F G
Sbjct: 139 YQLINGVN------FCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIP 190
Query: 230 SKANTNRVAGTFGYIPPEYVYQG-ICSIKSDVFSFGMLLLEIL 271
+ T+ + T Y PPE + S D++S + E+L
Sbjct: 191 IRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 33/188 (17%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQ------GLQELKNEALVIAKVQHKNLV 132
K+G+G FG V+K K G ++A+K++ + + + L+E+K ++ ++H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL----------QIIEGIV 182
L+ C + Y K + +FD + L L + + ++++ ++
Sbjct: 81 NLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF---KGNESKANTNRVAG 239
GL Y+H R +I+HRD+KA+N+L+ ++ K++DFG+AR F K ++ NRV
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 240 TFGYIPPE 247
T Y PPE
Sbjct: 192 TLWYRPPE 199
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 NKLGEGGFGPV----YKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
++LG+G FG V Y + G +AVK+L ++ + E ++ + +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 134 LLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
G R L+ EYLP+ L FL R L+ L I +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--- 130
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT--FGYIPPEYV 249
R +HRDL A NIL++ E KI+DFG+A++ ++ + F Y PE +
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESL 189
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
I S +SDV+SFG++L E+ +
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 24/235 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQH 128
T+ + +LG+G F V + + + G E A K ++ + S + Q+L+ EA + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+VRL E L+++ + L D R I+ I+E + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIP 245
HL+ I+HRDLK N+LL + K K++DFG+A +G++ AGT GY+
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
PE + + D+++ G++L +L GY DQ ++ +IK
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILL----------VGYPPFWDEDQHRLYQQIK 219
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDE--------IAVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
++LG+G FG V L + D +AVK+L ++ + E ++ +
Sbjct: 29 SQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 131 LVRLLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
+V+ G R L+ EYLP+ L FL R L+ L I +G+ YL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL 143
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT--FGYIPP 246
R +HRDL A NIL++ E KI+DFG+A++ ++ + F Y P
Sbjct: 144 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-P 199
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILS 272
E + I S +SDV+SFG++L E+ +
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 24/235 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQH 128
T+ + +LG+G F V + + + G E A K ++ + S + Q+L+ EA + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+VRL E L+++ + L D R I+ I+E + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAGTFGYIP 245
HL+ I+HRDLK N+LL + K K++DFG+A +G++ AGT GY+
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKIK 300
PE + + D+++ G++L +L GY DQ ++ +IK
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILL----------VGYPPFWDEDQHRLYQQIK 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 32/207 (15%)
Query: 81 LGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
LG G F V VLA+ G AVK + ++ +G + ++NE V+ K++H+N+V L
Sbjct: 30 LGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-----IIEGIVEGLLYLHL 190
+ L+ + + L FD ++E G + +I +++ + YLH
Sbjct: 87 DIYESPNHLYLVMQLVSGGEL----FDR----IVEKGFYTEKDASTLIRQVLDAVYYLH- 137
Query: 191 HSRVRIIHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVA-GTFGYIPP 246
R+ I+HRDLK N+L D+E K ISDFG++++ E K + A GT GY+ P
Sbjct: 138 --RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM----EGKGDVMSTACGTPGYVAP 191
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSG 273
E + Q S D +S G++ +L G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 37/209 (17%)
Query: 81 LGE-GGFGPVYKG------VLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVR 133
+GE G FG VYK VLA A K + +S + L++ E ++A H N+V+
Sbjct: 17 IGELGDFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQII-EGIVEGLLYLHLHS 192
LL + ++ E+ ++D + + +R L E +++Q++ + ++ L YLH +
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN- 127
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR---VAGTFGYIPPEYV 249
+IIHRDLKA NIL + K++DFG++ ++ R GT ++ PE V
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 250 YQGICSI--------KSDVFSFGMLLLEI 270
+C K+DV+S G+ L+E+
Sbjct: 182 ---MCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 79 NKLGEGGFGPVYKGVLAKGDE--------IAVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
++LG+G FG V L + D +AVK+L ++ + E ++ +
Sbjct: 17 SQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 131 LVRLLGCCIE--RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
+V+ G R L+ EYLP+ L FL R L+ L I +G+ YL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL 131
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT--FGYIPP 246
R +HRDL A NIL++ E KI+DFG+A++ ++ + F Y P
Sbjct: 132 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-P 187
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILS 272
E + I S +SDV+SFG++L E+ +
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 143
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 250 YQGICSIKSDVFSFGMLLLEILS-GKK 275
Y S KSDV+SFG+L+ E S G+K
Sbjct: 204 YYKFSS-KSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 143
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 250 YQGICSIKSDVFSFGMLLLEILS-GKK 275
Y S KSDV+SFG+L+ E S G+K
Sbjct: 204 YYKFSS-KSDVWSFGVLMWEAFSYGQK 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 123
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 124 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 250 YQGICSIKSDVFSFGMLLLEILS-GKK 275
Y S KSDV+SFG+L+ E S G+K
Sbjct: 184 YYKFSS-KSDVWSFGVLMWEAFSYGQK 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 141
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 142 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 250 YQGICSIKSDVFSFGMLLLEILS-GKK 275
Y S KSDV+SFG+L+ E S G+K
Sbjct: 202 YYKFSS-KSDVWSFGVLMWEAFSYGQK 227
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 121
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 122 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
Y S KSDV+SFG+L+ E S
Sbjct: 182 YYKFSS-KSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 127
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 128 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
Y S KSDV+SFG+L+ E S
Sbjct: 188 YYKFSS-KSDVWSFGVLMWEAFS 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 127
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 128 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
Y S KSDV+SFG+L+ E S
Sbjct: 188 YYKFSS-KSDVWSFGVLMWEAFS 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 36/222 (16%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRL--SVRSRQGLQELKNEALVIAKVQ-HKNLVRLL 135
KLG+G +G V+K + + G+ +AVK++ + ++ Q E +++ ++ H+N+V LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 136 GCCIERDEK--LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
+++ L+++Y+ L + +LE + ++ +++ + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKG------------NESKAN-------- 233
++HRD+K SNILL+ E K++DFG++R F NE+ N
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 234 TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T+ VA T Y PE + K D++S G +L EIL GK
Sbjct: 188 TDYVA-TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 133
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 134 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
Y S KSDV+SFG+L+ E S
Sbjct: 194 YYKFSS-KSDVWSFGVLMWEAFS 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I Y +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+G+G FG VY G E+A++ + + + L+ K E + + +H+N+V +G C
Sbjct: 41 IGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ +I ++L + DA +++L++ QI + IV+G+ YLH I+H
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 199 RDLKASNILLDKEMKPKISDFGM---ARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC- 254
+DLK+ N+ D K I+DFG+ + + + + G ++ PE + Q
Sbjct: 154 KDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 255 --------SIKSDVFSFGMLLLEI 270
S SDVF+ G + E+
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 30/239 (12%)
Query: 71 ATNNFSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRL--SVRSRQGLQELKNEALVIAKVQ 127
+ D ++G G +G V K V +I AVKR+ +V ++ Q L + +V+
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---LFDATKRVLLE--LGTRLQIIEGIV 182
+V+ G + + E + + S D F ++ V+ E LG +I V
Sbjct: 80 CPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG---KITLATV 135
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFG 242
+ L HL ++IIHRD+K SNILLD+ K+ DFG++ + +K R AG
Sbjct: 136 KALN--HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TRDAGCRP 190
Query: 243 YIPPEYV-----YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ-TQV 295
Y+ PE + QG ++SDV+S G+ L E+ +G+ F + + S+ +DQ TQV
Sbjct: 191 YMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGR----FPYPKWNSV--FDQLTQV 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF ++ A E+ ++ +S +++ E + + H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ L E R + + IV G YLH R R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 136
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARI--FKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
IHRDLK N+ L+++++ KI DFG+A + G K + GT YI PE + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKGH 192
Query: 255 SIKSDVFSFGMLLLEILSGKKNTE 278
S + DV+S G ++ +L GK E
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKR----LSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG GGFG V + + G+++A+K+ LS ++R+ E ++ K+ H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE---RWCLEIQIMKKLNHPNVVSA 77
Query: 135 ------LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
L D LL EY L +L L+ G ++ I L YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 189 HLHSRVRIIHRDLKASNILLD---KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H + RIIHRDLK NI+L + + KI D G A+ E GT Y+
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLA 191
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSG 273
PE + Q ++ D +SFG L E ++G
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKR----LSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+LG GGFG V + + G+++A+K+ LS ++R+ E ++ K+ H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE---RWCLEIQIMKKLNHPNVVSA 78
Query: 135 ------LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
L D LL EY L +L L+ G ++ I L YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 189 HLHSRVRIIHRDLKASNILLD---KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H + RIIHRDLK NI+L + + KI D G A+ E GT Y+
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLA 192
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSG 273
PE + Q ++ D +SFG L E ++G
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF ++ A E+ ++ +S +++ E + + H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ L E R + + IV G YLH R R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 160
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARI--FKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
IHRDLK N+ L+++++ KI DFG+A + G K + GT YI PE + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKGH 216
Query: 255 SIKSDVFSFGMLLLEILSGKKNTE 278
S + DV+S G ++ +L GK E
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 114 QELKNEALVIAKVQHKNLVRLLGCCIERDEKLL--IYEYLPNKSLDFFLFDATK-RVLLE 170
Q L +E ++ +++H N+VR I+R L + EY L + TK R L+
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 171 LGTRLQIIEGIVEGLLYLHLHSR--VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGN 228
L+++ + L H S ++HRDLK +N+ LD + K+ DFG+ARI +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
S A T GT Y+ PE + + + KSD++S G LL E+ +
Sbjct: 170 TSFAKT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF ++ A E+ ++ +S +++ E + + H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ L E R + + IV G YLH R R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 162
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARI--FKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
IHRDLK N+ L+++++ KI DFG+A + G K + GT YI PE + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAPEVLSKKGH 218
Query: 255 SIKSDVFSFGMLLLEILSGKKNTE 278
S + DV+S G ++ +L GK E
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 46 KANNRRKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI----A 101
+A N R+S K +S + +F +G G + V L K D I
Sbjct: 3 EAMNTRESGK----------ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV 52
Query: 102 VKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLL-IYEYLPNKSLDFFL 160
VK+ V + + ++ E V + + + L C + + +L + EY+ L F +
Sbjct: 53 VKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM 112
Query: 161 FDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFG 220
+R L E R E I L YLH II+RDLK N+LLD E K++D+G
Sbjct: 113 --QRQRKLPEEHARFYSAE-ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG 166
Query: 221 MARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
M + +G T+ GT YI PE + D ++ G+L+ E+++G+
Sbjct: 167 MCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLLGC 137
+G+G +G V++G +G+ +AVK S R + EL N ++ +H+N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 138 CI----ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL--- 190
+ + LI Y SL +D + L+ + L+I+ I GL +LH+
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 191 --HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF--KGNESKANTNRVAGTFGYIPP 246
+ I HRDLK+ NIL+ K + I+D G+A + N+ N GT Y+ P
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 247 EYVYQGI---C--SIKS-DVFSFGMLLLEI 270
E + + I C S K D+++FG++L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+G GGF V + G+ +A+K + + L +K E + ++H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
++ ++ EY P L F + ++ L E TR+ + IV + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGEL--FDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA---H 131
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS 258
RDLK N+L D+ K K+ DFG+ KGN+ + G+ Y PE + QG + S
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELI-QGKSYLGS 189
Query: 259 --DVFSFGMLLLEILSG 273
DV+S G+LL ++ G
Sbjct: 190 EADVWSMGILLYVLMCG 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 485
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 486 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
Y S KSDV+SFG+L+ E S
Sbjct: 546 YYKFSS-KSDVWSFGVLMWEAFS 567
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLLGC 137
+G+G +G V++G +G+ +AVK S R + EL N ++ +H+N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 138 CI----ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL--- 190
+ + LI Y SL +D + L+ + L+I+ I GL +LH+
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 191 --HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF--KGNESKANTNRVAGTFGYIPP 246
+ I HRDLK+ NIL+ K + I+D G+A + N+ N GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 247 EYVYQGI---C--SIKS-DVFSFGMLLLEI 270
E + + I C S K D+++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 81 LGEGGFGPVYKGVLAKGDE--------IAVKRL-SVRSRQGLQELKNEALVIAKV-QHKN 130
LGEG FG V D+ +AVK L + + L +L +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFL-----------FDATKRVLLELGTRLQIIE 179
++ LLG C + +I Y +L +L +D RV E T ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 180 ---GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ G+ YL + + IHRDL A N+L+ + KI+DFG+AR + T
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ + + +SDV+SFG+L+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 29/210 (13%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLLGC 137
+G+G +G V++G +G+ +AVK S R + EL N ++ +H+N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 138 CI----ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL--- 190
+ + LI Y SL +D + L+ + L+I+ I GL +LH+
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 191 --HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF--KGNESKANTNRVAGTFGYIPP 246
+ I HRDLK+ NIL+ K + I+D G+A + N+ N GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 247 EYVYQGI---C--SIKS-DVFSFGMLLLEI 270
E + + I C S K D+++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 15/212 (7%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQELKN-----EA 120
V + + + LGEG F VYK ++I A+K++ + R ++ N E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
++ ++ H N++ LL + L+++++ L+ + D + ++L +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNS--LVLTPSHIKAYMLM 120
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++GL YLH H I+HRDLK +N+LLD+ K++DFG+A+ F G+ ++A ++V T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVV-T 175
Query: 241 FGYIPPEYVYQG-ICSIKSDVFSFGMLLLEIL 271
Y PE ++ + + D+++ G +L E+L
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 77 DTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQG-----LQELKNEALVIAKVQHKNL 131
+ +LG G FG V KG + + + + EL EA V+ ++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
VR++G C E + +L+ E L+ +L + ++ ++++ + G+ YL
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL--- 486
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES--KANTNRVAGTFGYIPPEYV 249
+HRDL A N+LL + KISDFG+++ + +E+ KA T+ Y P
Sbjct: 487 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
Y S KSDV+SFG+L+ E S
Sbjct: 547 YYKFSS-KSDVWSFGVLMWEAFS 568
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 84 GGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDE 143
G FG V+K L D +AVK ++ +Q Q + E ++H+NL++ + +R
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAA-EKRGS 82
Query: 144 KLLIYEYLPNKSLD-FFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH--------SRV 194
L + +L D L D K ++ + E + GL YLH +
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKP 142
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV----- 249
I HRD K+ N+LL ++ ++DFG+A F+ + +T+ GT Y+ PE +
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAIN 202
Query: 250 YQGICSIKSDVFSFGMLLLEILS 272
+Q ++ D+++ G++L E++S
Sbjct: 203 FQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 79 NKLGEGGFGPVYKGVLA-KGDEIAVK---RLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+ LG G FG V G G ++AVK R +RS + +++ E + +H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
+ ++ EY+ L F + L E +R ++ + I+ G+ Y H H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGEL--FDYICKNGRLDEKESR-RLFQQILSGVDYCHRHM-- 136
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV----Y 250
++HRDLK N+LLD M KI+DFG++ + E + G+ Y PE + Y
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLY 192
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
G + D++S G++L +L G
Sbjct: 193 AG---PEVDIWSSGVILYALLCG 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEI----AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
+G G + V L K D I VK+ V + + ++ E V + + + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 137 CCIERDEKLL-IYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
C + + +L + EY+ L F + +R L E R E I L YLH
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG--- 126
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
II+RDLK N+LLD E K++D+GM + +G T+ GT YI PE +
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 256 IKSDVFSFGMLLLEILSGK 274
D ++ G+L+ E+++G+
Sbjct: 185 FSVDWWALGVLMFEMMAGR 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 27/232 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGD----EIAVKRL--SVRSRQGLQELKNEALVIAKV 126
F+ LG+G FG V + L + D ++AVK L + + ++E EA + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 127 QHKNLVRLLGCCIERDEK------LLIYEYLPNKSLDFFLFDA---TKRVLLELGTRLQI 177
H ++ +L+G + K ++I ++ + L FL + L L T ++
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESKANTNR 236
+ I G+ YL S IHRDL A N +L ++M ++DFG++R I+ G+ +
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS-------GKKNTEFYH 281
++ E + + ++ SDV++FG+ + EI++ G +N E Y+
Sbjct: 200 KL-PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN 250
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEI----AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
+G G + V L K D I VK+ V + + ++ E V + + + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 137 CCIERDEKLL-IYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
C + + +L + EY+ L F + +R L E R E I L YLH
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG--- 130
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
II+RDLK N+LLD E K++D+GM + +G T+ GT YI PE +
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 256 IKSDVFSFGMLLLEILSGK 274
D ++ G+L+ E+++G+
Sbjct: 189 FSVDWWALGVLMFEMMAGR 207
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 35/264 (13%)
Query: 37 KADDIELSNKANNRRKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGV-LA 95
K +D + N +S E ELP +++ + + +G G V + V A
Sbjct: 60 KLNDAQPKGTENLYFQSMGPEDELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRA 117
Query: 96 KGDEIAVKRLSVR----SRQGLQELKN----EALVIAKVQ-HKNLVRLLGCCIERDEKLL 146
G E AVK + V S + L+E++ E ++ +V H +++ L+ L
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177
Query: 147 IYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNI 206
+++ + + + F + K L E TR I+ ++E + +LH ++ I+HRDLK NI
Sbjct: 178 VFDLM--RKGELFDYLTEKVALSEKETR-SIMRSLLEAVSFLHANN---IVHRDLKPENI 231
Query: 207 LLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS-------- 258
LLD M+ ++SDFG + + E + GT GY+ PE + CS+
Sbjct: 232 LLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILK---CSMDETHPGYGKE 285
Query: 259 -DVFSFGMLLLEILSGKKNTEFYH 281
D+++ G++L +L+G + F+H
Sbjct: 286 VDLWACGVILFTLLAG--SPPFWH 307
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQ---GLQELKNEALVIAKVQH 128
N F LG+GGFG V V A G A K+L + + G NE ++ KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
+ +V L +D L+ + L F ++ + E E I GL L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDL 302
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMA-RIFKGNESKANTNRVAGTFGYIPPE 247
H R RI++RDLK NILLD +ISD G+A + +G K GT GY+ PE
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV----GTVGYMAPE 355
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
V + D ++ G LL E+++G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQGLQE------LKNEALVIAKVQHKNLVR 133
LGEG FG V K + +A+K +S RQ L++ ++ E + ++H ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFIS---RQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
L + +++ EY + D+ + KR+ + G R + I+ + Y H H
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRF--FQQIICAIEYCHRH-- 127
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIF-KGNESKANTNRVAGTFGYIPPEYV--- 249
+I+HRDLK N+LLD + KI+DFG++ I GN K + G+ Y PE +
Sbjct: 128 -KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAAPEVINGK 182
Query: 250 -YQGICSIKSDVFSFGMLLLEILSGK 274
Y G + DV+S G++L +L G+
Sbjct: 183 LYAG---PEVDVWSCGIVLYVMLVGR 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 114 QELKNEALVIAKVQHKNLVRLLGCCIERDEKLL--IYEYLPNKSLDFFLFDATK-RVLLE 170
Q L +E ++ +++H N+VR I+R L + EY L + TK R L+
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 171 LGTRLQIIEGIVEGLLYLHLHSR--VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGN 228
L+++ + L H S ++HRDLK +N+ LD + K+ DFG+ARI +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
E A GT Y+ PE + + + KSD++S G LL E+ +
Sbjct: 170 EDFA--KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQ---GLQELKNEALVIAKVQH 128
N F LG+GGFG V V A G A K+L + + G NE ++ KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
+ +V L +D L+ + L F ++ + E E I GL L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDL 302
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMA-RIFKGNESKANTNRVAGTFGYIPPE 247
H R RI++RDLK NILLD +ISD G+A + +G K GT GY+ PE
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV----GTVGYMAPE 355
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
V + D ++ G LL E+++G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 25/223 (11%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQ 111
E+P F+ ++F LG+G FG VY LA+ + +A+K L S ++
Sbjct: 4 AEMPKRKFT-----IDDFDIVRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKE 55
Query: 112 GLQ-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
G++ +L+ E + + ++H N++R+ +R L+ E+ P L + K +
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFD 112
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
+E + + L Y H ++IHRD+K N+L+ + + KI+DFG + +
Sbjct: 113 EQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAP 165
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+PPE + K D++ G+L E L G
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLLGCCI 139
LG+G FG K + E+ V + +R + Q E V+ ++H N+++ +G +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV-L 76
Query: 140 ERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+D++L I EY+ +L + + R+ + I G+ YLH + IIH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 199 RDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR------------VAGTFGYIPP 246
RDL + N L+ + ++DFG+AR+ +++ R V G ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
E + K DVFSFG++L EI+ G+ N +
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 114 QELKNEALVIAKVQHKNLVRLLGCCIERDEKLL--IYEYLPNKSLDFFLFDATK-RVLLE 170
Q L +E ++ +++H N+VR I+R L + EY L + TK R L+
Sbjct: 50 QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 171 LGTRLQIIEGIVEGLLYLHLHSR--VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGN 228
L+++ + L H S ++HRDLK +N+ LD + K+ DFG+ARI +
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
S A GT Y+ PE + + + KSD++S G LL E+ +
Sbjct: 170 TSFAKA--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 25/223 (11%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQ 111
E+P F+ ++F LG+G FG VY LA+ + +A+K L S ++
Sbjct: 4 AEMPKRKFT-----IDDFDIGRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKE 55
Query: 112 GLQ-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
G++ +L+ E + + ++H N++R+ +R L+ E+ P L + K +
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFD 112
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
+E + + L Y H ++IHRD+K N+L+ + + KI+DFG + +
Sbjct: 113 EQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAP 165
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+PPE + K D++ G+L E L G
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 15/234 (6%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF Y+ E+ ++ +S +++ E + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ + E R + ++G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 163
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI 256
IHRDLK N+ L+ +M KI DFG+A + + + T + GT YI PE + + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSF 221
Query: 257 KSDVFSFGMLLLEILSGKK--NTEFYHTGYLSINGYDQTQVASKIKLVESCLAR 308
+ D++S G +L +L GK T Y+ I ++ V I V S L R
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK-NEYSVPRHINPVASALIR 274
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 25/223 (11%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRL--SVRSRQ 111
E+P F+ ++F LG+G FG VY LA+ + +A+K L S ++
Sbjct: 5 AEMPKRKFT-----IDDFDIGRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKE 56
Query: 112 GLQ-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
G++ +L+ E + + ++H N++R+ +R L+ E+ P L + K +
Sbjct: 57 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL---YKELQKHGRFD 113
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNES 230
+E + + L Y H ++IHRD+K N+L+ + + KI+DFG + +
Sbjct: 114 EQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAP 166
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+PPE + K D++ G+L E L G
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 66 SSVAAATN------NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQE 115
+S+ +AT+ N+ +G+G F V + VL G E+AVK + + + LQ+
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQK 60
Query: 116 LKNEALVIAKVQHKNLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTR 174
L E ++ + H N+V+L IE ++ L L+ EY + +L + E +
Sbjct: 61 LFREVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 119
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKAN 233
+ IV + Y H + I+HRDLKA N+LLD +M KI+DFG + F GN+
Sbjct: 120 FR---QIVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---- 169
Query: 234 TNRVAGTFGYIPPEYVYQG--ICSIKSDVFSFGMLLLEILSG 273
+ G+ Y PE ++QG + DV+S G++L ++SG
Sbjct: 170 LDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 79 NKLGEGGFGPVYKGVLA-KGDEIAVK---RLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+ LG G FG V G G ++AVK R +RS + ++K E + +H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
+ ++ EY+ L F + + E+ R ++ + I+ + Y H H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGEL--FDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM-- 131
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV----Y 250
++HRDLK N+LLD M KI+DFG++ + E ++ G+ Y PE + Y
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISGRLY 187
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
G + D++S G++L +L G
Sbjct: 188 AG---PEVDIWSCGVILYALLCG 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+A+K + + + LQ+L E ++ + H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L LI EY + +L + E ++ + IV + Y
Sbjct: 72 NIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYC 127
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEY 248
H + RI+HRDLKA N+LLD +M KI+DFG + F + G+ Y PE
Sbjct: 128 H---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDTFCGSPPYAAPE- 180
Query: 249 VYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+A+K + + + LQ+L E ++ + H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L LI EY + +L + E ++ + IV + Y
Sbjct: 75 NIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYC 130
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEY 248
H + RI+HRDLKA N+LLD +M KI+DFG + F + G Y PE
Sbjct: 131 H---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDAFCGAPPYAAPE- 183
Query: 249 VYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 79 NKLGEGGFGPVYKGVLA-KGDEIAVK---RLSVRSRQGLQELKNEALVIAKVQHKNLVRL 134
+ LG G FG V G G ++AVK R +RS + ++K E + +H ++++L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
+ ++ EY+ L F + + E+ R ++ + I+ + Y H H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGEL--FDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM-- 131
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV----Y 250
++HRDLK N+LLD M KI+DFG++ + E + G+ Y PE + Y
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISGRLY 187
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
G + D++S G++L +L G
Sbjct: 188 AG---PEVDIWSCGVILYALLCG 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 140
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 141 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 195
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESK 231
T + IE I + L+ + IIHRD+K +NIL+ K+ DFG+AR I S
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T V GT Y+ PE +SDV+S G +L E+L+G+
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 31/211 (14%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKNEALVIAKVQHKNLVRLLGC 137
+G+G +G V++G L G+ +AVK S R Q E+ N L+ +H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 138 CI----ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL--- 190
+ + LI Y + SL +D +R LE L++ GL +LH+
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 191 --HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIF-KGNE--SKANTNRVAGTFGYIP 245
+ I HRD K+ N+L+ ++ I+D G+A + +G++ N RV GT Y+
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMA 185
Query: 246 PEYVYQGI---C--SIK-SDVFSFGMLLLEI 270
PE + + I C S K +D+++FG++L EI
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AVK + + + LQ+L E ++ + H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + F + + E R + + IV + Y
Sbjct: 67 NIVKLFEV-IETEKTLYLVMEYASGGEV--FDYLVAHGWMKEKEARAKFRQ-IVSAVQYC 122
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD +M KI+DFG + F GN+ + G+ Y PE
Sbjct: 123 H---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPE 175
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 176 -LFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 62 LFSFSSVAAATNNFSDTNKLGEGGFGPVY---KGVLAKGDEIAVKRLSVRSRQGLQELKN 118
+F S + + KLG G +G V V I + R + S +L
Sbjct: 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDAT-KRVLLELGTRLQI 177
E V+ + H N+++L ++ L+ E L FD R+ I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVI 141
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANT 234
I+ ++ G+ YLH H+ I+HRDLK N+LL+ + K KI DFG++ +F E++
Sbjct: 142 IKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKM 195
Query: 235 NRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
GT YI PE V + K DV+S G++L +L+G
Sbjct: 196 KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRL-------SVRSRQGLQELKNEALVIAK 125
++F ++LG G G V K I ++L ++R+ Q ++EL+ V+ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-QIIRELQ----VLHE 70
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+V G E + E++ SLD L +A KR+ E+ ++ I ++ GL
Sbjct: 71 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSI--AVLRGL 127
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YL + +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+
Sbjct: 128 AYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMA 181
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + S++SD++S G+ L+E+ G+
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF Y+ E+ ++ +S +++ E + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ + E R + ++G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 163
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARI--FKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
IHRDLK N+ L+ +M KI DFG+A F G K + GT YI PE + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX----LCGTPNYIAPEVLCKKGH 219
Query: 255 SIKSDVFSFGMLLLEILSGKK--NTEFYHTGYLSINGYDQTQVASKIKLVESCLAR 308
S + D++S G +L +L GK T Y+ I ++ V I V S L R
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK-NEYSVPRHINPVASALIR 274
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 121
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 122 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 40/222 (18%)
Query: 71 ATNNFSDTNKLGEGGFGPVYK-------------GVLAKGDEIAVKRLSVRSRQGLQELK 117
+ + + +GEG +G V K L D+ VK++++R + L++L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
H+NLV LL C ++ L++E++ + LD L G Q+
Sbjct: 83 ----------HENLVNLLEVCKKKKRWYLVFEFVDHTILD-------DLELFPNGLDYQV 125
Query: 178 IE----GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
++ I+ G+ + H H+ IIHRD+K NIL+ + K+ DFG AR +
Sbjct: 126 VQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVY 181
Query: 234 TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ VA T Y PE + + K+ DV++ G L+ E+ G+
Sbjct: 182 DDEVA-TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 121
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 122 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 121
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 122 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 121
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 122 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 121
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 122 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AVK + + + LQ+L E ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + +L + E + + IV + Y
Sbjct: 74 NIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYC 129
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD +M KI+DFG + F GN+ A G Y PE
Sbjct: 130 H---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAPE 182
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF Y+ E+ ++ +S +++ E + + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ + E R + ++G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 163
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARI--FKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
IHRDLK N+ L+ +M KI DFG+A F G K + GT YI PE + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD----LCGTPNYIAPEVLCKKGH 219
Query: 255 SIKSDVFSFGMLLLEILSGKK--NTEFYHTGYLSINGYDQTQVASKIKLVESCLAR 308
S + D++S G +L +L GK T Y+ I ++ V I V S L R
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK-NEYSVPRHINPVASALIR 274
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS----RQGLQELKNEALVIAKVQHKNLVRLLG 136
LG+GGF Y+ E+ ++ +S +++ E + + + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ D ++ E +SL ++ + E R + ++G+ YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RV 147
Query: 197 IHRDLKASNILLDKEMKPKISDFGMARI--FKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
IHRDLK N+ L+ +M KI DFG+A F G K + GT YI PE + +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD----LCGTPNYIAPEVLCKKGH 203
Query: 255 SIKSDVFSFGMLLLEILSGKK--NTEFYHTGYLSINGYDQTQVASKIKLVESCLAR 308
S + D++S G +L +L GK T Y+ I ++ V I V S L R
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK-NEYSVPRHINPVASALIR 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 148
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 149 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 203
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AVK + + + LQ+L E ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + +L + E + + IV + Y
Sbjct: 74 NIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYC 129
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD +M KI+DFG + F GN+ + G+ Y PE
Sbjct: 130 H---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPE 182
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESK 231
T + IE I + L+ + IIHRD+K +NI++ K+ DFG+AR I S
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T V GT Y+ PE +SDV+S G +L E+L+G+
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESK 231
T + IE I + L+ + IIHRD+K +NI++ K+ DFG+AR I S
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T V GT Y+ PE +SDV+S G +L E+L+G+
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESK 231
T + IE I + L+ + IIHRD+K +NI++ K+ DFG+AR I S
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T V GT Y+ PE +SDV+S G +L E+L+G+
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESK 231
T + IE I + L+ + IIHRD+K +NI++ K+ DFG+AR I S
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T V GT Y+ PE +SDV+S G +L E+L+G+
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 48/223 (21%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS--VRSRQGLQELKNEALVIAKVQHKN 130
+ +G G +G V + + G+++A+K+LS +S + E L++ +QH+N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSL----DFFLFDATKRVLLELGTRLQIIEGI----- 181
++ LL + P SL DF+L V+ + T LQ I G+
Sbjct: 85 VIGLLDV------------FTPASSLRNFYDFYL------VMPFMQTDLQKIMGLKFSEE 126
Query: 182 ---------VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
++GL Y+H ++HRDLK N+ ++++ + KI DFG+AR + A
Sbjct: 127 KIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADA 178
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T Y PE + + ++ D++S G ++ E+L+GK
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 79 NKLGEGGFGPV--YKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
KLGEGGF V +G L G A+KR+ +Q +E + EA + H N++RL+
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 137 CCI-ERDEKLLIYEYLPNKSLDFF----LFDATKRV-----LLELGTRLQIIEGIVEGLL 186
C+ ER K + LP FF L++ +R+ L L ++ GI GL
Sbjct: 94 YCLRERGAKHEAWLLLP-----FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFG---MARIF-KGNESKANTNRVAG--- 239
+H HRDLK +NILL E +P + D G A I +G+ A
Sbjct: 149 AIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 240 TFGYIPPE-YVYQGICSI--KSDVFSFGMLLLEILSGK 274
T Y PE + Q C I ++DV+S G +L ++ G+
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AVK + + + LQ+L E ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + +L + E + + IV + Y
Sbjct: 74 NIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYC 129
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD +M KI+DFG + F GN+ + G+ Y PE
Sbjct: 130 H---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPE 182
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 183
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G + N GT Y+ PE +
Sbjct: 184 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 238
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 73 NNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKN 130
++F ++LG G G V+K G +A K + + + ++ ++ E V+ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+V G E + E++ SLD L A R+ ++ ++ I +++GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSI--AVIKGLTYLR- 124
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
+ +I+HRD+K SNIL++ + K+ DFG++ G N GT Y+ PE +
Sbjct: 125 -EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPERLQ 179
Query: 251 QGICSIKSDVFSFGMLLLEILSGK 274
S++SD++S G+ L+E+ G+
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-IFKGNESK 231
T + IE I + L+ + IIHRD+K +NI++ K+ DFG+AR I S
Sbjct: 131 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 232 ANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKK 275
T V GT Y+ PE +SDV+S G +L E+L+G+
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 105 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 157
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 158 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 212
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSSECQHLIR 269
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 270 WCLALRP 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 80 KLGEGGFGPVYK-GVLAKGDEIAVK----RLSVRSRQGL--QELKNEALVIAKVQHKNLV 132
+LG G F V K + G E A K R S SR+G+ +E++ E ++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
L R + +LI E + L F F A K L E I+ I++G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSEEEA-TSFIKQILDGVNYLHTK- 134
Query: 193 RVRIIHRDLKASNI-LLDKEMK-PKIS--DFGMAR-IFKGNESKANTNRVAGTFGYIPPE 247
+I H DLK NI LLDK + P I DFG+A I G E K + GT ++ PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V +++D++S G++ +LSG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLA--KGDEI--AVKRLS----VRSRQGLQELK 117
S+ A ++F +G+G FG K +LA K +E+ AVK L ++ ++ +
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFG---KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMS 87
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
+++ V+H LV L D+ + +Y+ L + L +R LE R
Sbjct: 88 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYA 145
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRV 237
E I L YLH + I++RDLK NILLD + ++DFG+ + + E + T+
Sbjct: 146 AE-IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTF 199
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
GT Y+ PE +++ D + G +L E+L G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
+ G+ +L S + IHRDL A NILL + KI DFG+AR N
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 241 FGYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
++ PE ++ I S KSDV+S+G+LL EI S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 105 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 157
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 158 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 212
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSSECQHLIR 269
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 270 WCLALRP 276
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 48/223 (21%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS--VRSRQGLQELKNEALVIAKVQHKN 130
+ +G G +G V + + G+++A+K+LS +S + E L++ +QH+N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSL----DFFLFDATKRVLLELGTRLQIIEGI----- 181
++ LL + P SL DF+L V+ + T LQ I G+
Sbjct: 103 VIGLLDV------------FTPASSLRNFYDFYL------VMPFMQTDLQKIMGMEFSEE 144
Query: 182 ---------VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
++GL Y+H ++HRDLK N+ ++++ + KI DFG+AR + A
Sbjct: 145 KIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADA 196
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T Y PE + + ++ D++S G ++ E+L+GK
Sbjct: 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 59/269 (21%)
Query: 99 EIAVKRLSVR-----SRQGLQELKNEAL----VIAKVQ-HKNLVRLLGCCIERDEKLLIY 148
E AVK + V S + +QEL+ L ++ KV H N+++L L++
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 149 EYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILL 208
+ + K + F + K L E TR +I+ ++E + LH ++ I+HRDLK NILL
Sbjct: 104 DLM--KKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILL 157
Query: 209 DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS---------D 259
D +M K++DFG + E V GT Y+ PE + CS+ D
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIE---CSMNDNHPGYGKEVD 211
Query: 260 VFSFGMLLLEILSGKKNTEFYHT----------------GYLSINGYDQT--QVASKIKL 301
++S G+++ +L+G + F+H G + Y T + S+ +
Sbjct: 212 MWSTGVIMYTLLAG--SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 269
Query: 302 V--------ESCLARPFRQYCCILKVRTF 322
V E LA PF Q + +VR F
Sbjct: 270 VQPQKRYTAEEALAHPFFQQYVVEEVRHF 298
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
++F + LG+G FG V K A A+K++ + + L + +E +++A + H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-ATKRVLLEL----------GTRLQIIE 179
+VR +ER + + KS F + R L +L ++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-------IFKGNE--- 229
I+E L Y+H IIHRDLK NI +D+ KI DFG+A+ I K +
Sbjct: 124 QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 230 --SKANTNRVAGTFGYIPPEYVY-QGICSIKSDVFSFGMLLLEIL 271
S N GT Y+ E + G + K D++S G++ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 104 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 156
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 157 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 211
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSSECQHLIR 268
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 269 WCLALRP 275
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 119 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 171
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 172 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 226
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 283
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 284 WCLALRP 290
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 104 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 156
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 157 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 211
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSSECQHLIR 268
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 269 WCLALRP 275
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 91 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 143
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 144 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 198
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 255
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 256 WCLALRP 262
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 59/269 (21%)
Query: 99 EIAVKRLSVR-----SRQGLQELKNEAL----VIAKVQ-HKNLVRLLGCCIERDEKLLIY 148
E AVK + V S + +QEL+ L ++ KV H N+++L L++
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 149 EYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILL 208
+ + K + F + K L E TR +I+ ++E + LH ++ I+HRDLK NILL
Sbjct: 104 DLM--KKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILL 157
Query: 209 DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS---------D 259
D +M K++DFG + E V GT Y+ PE + CS+ D
Sbjct: 158 DDDMNIKLTDFGFSCQLDPGE---KLRSVCGTPSYLAPEIIE---CSMNDNHPGYGKEVD 211
Query: 260 VFSFGMLLLEILSGKKNTEFYHT----------------GYLSINGYDQT--QVASKIKL 301
++S G+++ +L+G + F+H G + Y T + S+ +
Sbjct: 212 MWSTGVIMYTLLAG--SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 269
Query: 302 V--------ESCLARPFRQYCCILKVRTF 322
V E LA PF Q + +VR F
Sbjct: 270 VQPQKRYTAEEALAHPFFQQYVVEEVRHF 298
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 77 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 129
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 130 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 184
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 241
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 242 WCLALRP 248
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 76 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 128
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 129 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 183
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 240
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 241 WCLALRP 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 119 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA 173
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 80 KLGEGGFGPVYK-GVLAKGDEIAVK----RLSVRSRQGL--QELKNEALVIAKVQHKNLV 132
+LG G F V K + G E A K R S SR+G+ +E++ E ++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
L R + +LI E + L F F A K L E I+ I++G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK- 134
Query: 193 RVRIIHRDLKASNI-LLDKEMK-PKIS--DFGMAR-IFKGNESKANTNRVAGTFGYIPPE 247
+I H DLK NI LLDK + P I DFG+A I G E K + GT ++ PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V +++D++S G++ +LSG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 104 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 156
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 157 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 211
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 268
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 269 WCLALRP 275
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 77 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 129
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 130 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 184
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 241
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 242 WCLALRP 248
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVK---RLSVRSRQGLQELKNEALVIA 124
++ + KLG G +G V +L K G E A+K + SV + L +E V+
Sbjct: 20 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDAT--KRVLLELGTRLQIIEGIV 182
++ H N+++L ++ L+ E L FD ++ E+ + I++ ++
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAV-IMKQVL 131
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAG 239
G YLH H+ I+HRDLK N+LL+ + + KI DFG++ F E G
Sbjct: 132 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLG 185
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL------SGKKNTEF---YHTGYLSINGY 290
T YI PE V + K DV+S G++L +L G+ + E G S +
Sbjct: 186 TAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPP 244
Query: 291 DQTQVASKIK 300
D TQV+ + K
Sbjct: 245 DWTQVSDEAK 254
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 75 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 127
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 128 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 182
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 239
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 240 WCLALRP 246
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 77 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 129
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 130 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 184
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 241
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 242 WCLALRP 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 119 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 173
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 80 KLGEGGFGPVYK-GVLAKGDEIAVK----RLSVRSRQGL--QELKNEALVIAKVQHKNLV 132
+LG G F V K + G E A K R S SR+G+ +E++ E ++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
L R + +LI E + L F F A K L E I+ I++G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK- 134
Query: 193 RVRIIHRDLKASNI-LLDKEMK-PKIS--DFGMAR-IFKGNESKANTNRVAGTFGYIPPE 247
+I H DLK NI LLDK + P I DFG+A I G E K + GT ++ PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V +++D++S G++ +LSG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ---GLQELKNEALVIAKVQH 128
+ F D LG GGFG V+ + A G A K+L+ + + G Q E ++AKV
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-RVLLELGTRLQIIEGIVEGLLY 187
+ +V L + + L+ + + + +++ + + + IV GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE- 303
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
HLH R II+RDLK N+LLD + +ISD G+A K ++K T AGT G++ PE
Sbjct: 304 -HLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
+ D F+ G+ L E+++ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 8 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 121
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 122 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA 176
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 80 KLGEGGFGPVYK-GVLAKGDEIAVK----RLSVRSRQGL--QELKNEALVIAKVQHKNLV 132
+LG G F V K + G E A K R S SR+G+ +E++ E ++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
L R + +LI E + L F F A K L E I+ I++G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK- 134
Query: 193 RVRIIHRDLKASNI-LLDKEMK-PKIS--DFGMAR-IFKGNESKANTNRVAGTFGYIPPE 247
+I H DLK NI LLDK + P I DFG+A I G E K + GT ++ PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V +++D++S G++ +LSG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ---GLQELKNEALVIAKVQH 128
+ F D LG GGFG V+ + A G A K+L+ + + G Q E ++AKV
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-RVLLELGTRLQIIEGIVEGLLY 187
+ +V L + + L+ + + + +++ + + + IV GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE- 303
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
HLH R II+RDLK N+LLD + +ISD G+A K ++K T AGT G++ PE
Sbjct: 304 -HLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
+ D F+ G+ L E+++ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 72 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 124
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 125 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 179
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 236
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 237 WCLALRP 243
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 72 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 124
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 125 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 179
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSSECQHLIR 236
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 237 WCLALRP 243
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ---GLQELKNEALVIAKVQH 128
+ F D LG GGFG V+ + A G A K+L+ + + G Q E ++AKV
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-RVLLELGTRLQIIEGIVEGLLY 187
+ +V L + + L+ + + + +++ + + + IV GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE- 303
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
HLH R II+RDLK N+LLD + +ISD G+A K ++K T AGT G++ PE
Sbjct: 304 -HLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
+ D F+ G+ L E+++ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 92 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 144
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 145 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 199
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 256
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 257 WCLALRP 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AV+ + + + LQ+L E ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + +L + E + + IV + Y
Sbjct: 74 NIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYC 129
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD +M KI+DFG + F GN+ + G+ Y PE
Sbjct: 130 H---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDEFCGSPPYAAPE 182
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 119 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA 173
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ---GLQELKNEALVIAKVQH 128
+ F D LG GGFG V+ + A G A K+L+ + + G Q E ++AKV
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATK-RVLLELGTRLQIIEGIVEGLLY 187
+ +V L + + L+ + + + +++ + + + IV GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE- 303
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
HLH R II+RDLK N+LLD + +ISD G+A K ++K T AGT G++ PE
Sbjct: 304 -HLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSGK 274
+ D F+ G+ L E+++ +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 80 KLGEGGFGPVYK-GVLAKGDEIAVK----RLSVRSRQGL--QELKNEALVIAKVQHKNLV 132
+LG G F V K + G E A K R S SR+G+ +E++ E ++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
L R + +LI E + L F F A K L E I+ I++G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK- 134
Query: 193 RVRIIHRDLKASNI-LLDKEMK-PKIS--DFGMAR-IFKGNESKANTNRVAGTFGYIPPE 247
+I H DLK NI LLDK + P I DFG+A I G E K + GT ++ PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V +++D++S G++ +LSG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 119 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 173
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 111 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 163
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 164 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 218
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 275
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 276 WCLALRP 282
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 118
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 119 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 173
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVL----AKGDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N+F LG+G FG V +L A G A+K L + ++ + E+ V+
Sbjct: 10 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSAL 123
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH SR +++RD+K N++LDK+ KI+DFG+ + +G A GT Y+
Sbjct: 124 EYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 178
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AV+ + + + LQ+L E ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + +L + E + + IV + Y
Sbjct: 74 NIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYC 129
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD +M KI+DFG + F GN+ + G+ Y PE
Sbjct: 130 H---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPE 182
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVK---RLSVRSRQGLQELKNEALVIA 124
++ + KLG G +G V +L K G E A+K + SV + L +E V+
Sbjct: 3 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDAT--KRVLLELGTRLQIIEGIV 182
++ H N+++L ++ L+ E L FD ++ E+ + I++ ++
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAV-IMKQVL 114
Query: 183 EGLLYLHLHSRVRIIHRDLKASNILLDKEMKP---KISDFGMARIFKGNESKANTNRVAG 239
G YLH H+ I+HRDLK N+LL+ + + KI DFG++ F E G
Sbjct: 115 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLG 168
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEIL------SGKKNTEF---YHTGYLSINGY 290
T YI PE V + K DV+S G++L +L G+ + E G S +
Sbjct: 169 TAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPP 227
Query: 291 DQTQVASKIK 300
D TQV+ + K
Sbjct: 228 DWTQVSDEAK 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L+E++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG+A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 79 NKLGEGGFGPVYK-GVLAKGDEIAVK----RLSVRSRQGL--QELKNEALVIAKVQHKNL 131
+LG G F V K + G E A K R S SR+G+ +E++ E ++ +V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
+ L R + +LI E + L F F A K L E I+ I++G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSE-EEATSFIKQILDGVNYLHTK 134
Query: 192 SRVRIIHRDLKASNI-LLDKEMK-PKIS--DFGMAR-IFKGNESKANTNRVAGTFGYIPP 246
+I H DLK NI LLDK + P I DFG+A I G E K + GT ++ P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAP 187
Query: 247 EYVYQGICSIKSDVFSFGMLLLEILSG 273
E V +++D++S G++ +LSG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYK-GVLAKGDEIAVKRL--SVRSRQGLQELKNEALVI 123
S+ ++ +LG G +G V K + G +AVKR+ +V S++ + L + + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 124 AKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---LFDATKRVLLELGTRLQIIEG 180
V V G R+ + I L + SLD F + D + + ++ ++ +
Sbjct: 61 RTVDCPFTVTFYGALF-REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--S 117
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
IV+ L HLHS++ +IHRD+K SN+L++ + K+ DFG++ + +K + AG
Sbjct: 118 IVKALE--HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK---DIDAGC 172
Query: 241 FGYIPPEYV----YQGICSIKSDVFSFGMLLLEI 270
Y+ PE + Q S+KSD++S G+ ++E+
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N F LG+G FG V +L K G A+K L + ++ + E V+
Sbjct: 8 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 121
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH S +++RDLK N++LDK+ KI+DFG+ + +G + A GT Y+
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLA 177
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 113/203 (55%), Gaps = 18/203 (8%)
Query: 80 KLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQELKNEAL----VIAKVQHKNLVRL 134
K+GEG +G V+K + EI A+KR VR + + + AL ++ +++HKN+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKR--VRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 135 LGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
+ D+KL L++E+ ++ L + FD+ L + + + +++GL + H SR
Sbjct: 67 HDV-LHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQ-LLKGLGFCH--SR 120
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG- 252
++HRDLK N+L+++ + K++DFG+AR F G + + V T Y PP+ ++
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 253 ICSIKSDVFSFGMLLLEILSGKK 275
+ S D++S G + E+ + +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAAR 200
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N F LG+G FG V +L K G A+K L + ++ + E V+
Sbjct: 9 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 122
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH S +++RDLK N++LDK+ KI+DFG+ + +G + A GT Y+
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLA 178
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 33/202 (16%)
Query: 99 EIAVKRLSVR-----SRQGLQELKNEAL----VIAKVQ-HKNLVRLLGCCIERDEKLLIY 148
E AVK + V S + +QEL+ L ++ KV H N+++L L++
Sbjct: 31 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 90
Query: 149 EYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILL 208
+ + K + F + K L E TR +I+ ++E + LH ++ I+HRDLK NILL
Sbjct: 91 DLM--KKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILL 144
Query: 209 DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS---------D 259
D +M K++DFG + E V GT Y+ PE + CS+ D
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIE---CSMNDNHPGYGKEVD 198
Query: 260 VFSFGMLLLEILSGKKNTEFYH 281
++S G+++ +L+G + F+H
Sbjct: 199 MWSTGVIMYTLLAG--SPPFWH 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N F LG+G FG V +L K G A+K L + ++ + E V+
Sbjct: 10 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 123
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH S +++RDLK N++LDK+ KI+DFG+ + +G + A GT Y+
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLA 179
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
+ IHRDL A NILL ++ KI DFG+AR + ++ PE ++ +
Sbjct: 211 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
Query: 255 SIKSDVFSFGMLLLEILS 272
+I+SDV+SFG+LL EI S
Sbjct: 271 TIQSDVWSFGVLLWEIFS 288
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 30 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ 142
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 143 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 193
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
+ IHRDL A NILL ++ KI DFG+AR + ++ PE ++ +
Sbjct: 213 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
Query: 255 SIKSDVFSFGMLLLEILS 272
+I+SDV+SFG+LL EI S
Sbjct: 273 TIQSDVWSFGVLLWEIFS 290
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + KA+ ++ ++ PE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP--IKWMAPESINFRRF 189
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
+ IHRDL A NILL ++ KI DFG+AR + ++ PE ++ +
Sbjct: 218 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
Query: 255 SIKSDVFSFGMLLLEILS 272
+I+SDV+SFG+LL EI S
Sbjct: 278 TIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
+ IHRDL A NILL ++ KI DFG+AR + ++ PE ++ +
Sbjct: 220 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
Query: 255 SIKSDVFSFGMLLLEILS 272
+I+SDV+SFG+LL EI S
Sbjct: 280 TIQSDVWSFGVLLWEIFS 297
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
++F + LG+G FG V K A A+K++ + + L + +E +++A + H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFF---------LFD--ATKRVLLELGTRLQIIE 179
+VR +ER + + KS F L+D ++ + + ++
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-------IFKGNE--- 229
I+E L Y+H IIHRDLK NI +D+ KI DFG+A+ I K +
Sbjct: 124 QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 230 --SKANTNRVAGTFGYIPPEYVY-QGICSIKSDVFSFGMLLLEIL 271
S N GT Y+ E + G + K D++S G++ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQH 128
A N+ + ++G G G V+K K G IAVK++ R G +E L+ V
Sbjct: 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR---RSGNKEENKRILMDLDVVL 78
Query: 129 KN-----LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL--QIIEGI 181
K+ +V+ G I + + E + + KR+ + R+ ++ I
Sbjct: 79 KSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKL-----KKRMQGPIPERILGKMTVAI 133
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
V+ L YL + +IHRD+K SNILLD+ + K+ DFG++ +++K +R AG
Sbjct: 134 VKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCA 188
Query: 242 GYIPPEYV-----YQGICSIKSDVFSFGMLLLEILSGK 274
Y+ PE + + I++DV+S G+ L+E+ +G+
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F +G G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ K++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F +G G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ K++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N F LG+G FG V +L K G A+K L + ++ + E V+
Sbjct: 148 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 261
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH S +++RDLK N++LDK+ KI+DFG+ + +G + A GT Y+
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLA 317
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 30 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 142
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 143 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 193
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 40/251 (15%)
Query: 80 KLGEGGFGPVYKGVLAKGD-EIAVKRLSVR--SRQGLQELKNEALVIAKVQHKNLVRLLG 136
++G G F VYKG+ + E+A L R ++ Q K EA + +QH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 137 C---------CIERDEKLLIYEYLPNKSLDFFL--FDATKRVLLELGTRLQIIEGIVEGL 185
CI +L+ E + +L +L F K +L R I++GL
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----QILKGL 142
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
+LH + IIHRDLK NI + KI D G+A + + + +KA V GT +
Sbjct: 143 QFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFX 197
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSG-------KKNTEFYH--TGYLSINGYDQTQV 295
PE Y+ DV++FG LE + + + Y T + +D+ +
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI 256
Query: 296 ASKIKLVESCL 306
+++E C+
Sbjct: 257 PEVKEIIEGCI 267
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 88
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 147
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 201
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
PE ++ S DV+S G +L E+L G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 95
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 154
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 155 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 208
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
PE ++ S DV+S G +L E+L G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 110
Query: 133 RL----LGCCIERDEKL--LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL ++DE L+ +Y+P + K+ L + +L + + + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 169
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 223
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 84
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 143
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 144 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 197
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
PE ++ S DV+S G +L E+L G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 105 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 157
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 158 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 212
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSXECQHLIR 269
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 270 WCLALRP 276
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 77
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 136
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 137 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 190
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 105 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 157
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 158 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 212
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSXECQHLIR 269
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 270 WCLALRP 276
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 217
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F +G G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ K++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 104 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 156
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 157 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 211
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IGGQVFFRQRVSXECQHLIR 268
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 269 WCLALRP 275
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 189
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLS---VRSRQGLQELKNEALVIAK 125
N F LG+G FG V +L K G A+K L + ++ + E V+
Sbjct: 151 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 126 VQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGL 185
+H L L D + EY L F L + +RV E R E IV L
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 264
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
YLH S +++RDLK N++LDK+ KI+DFG+ + +G + A GT Y+
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLA 320
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSGK 274
PE + D + G+++ E++ G+
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 88
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 147
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 201
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 107 VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLL--IYEYLPNKSLDFFLFDAT 164
++ R ++++ E ++ K+ H N+V+L+ + +E L ++E + + + T
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPT 130
Query: 165 KRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARI 224
+ L E R + +++G+ YLH +IIHRD+K SN+L+ ++ KI+DFG++
Sbjct: 131 LKPLSEDQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 225 FKGNESKANTNRVAGTFGYIPPEYVYQG--ICSIKS-DVFSFGMLLLEILSGK 274
FKG S A + GT ++ PE + + I S K+ DV++ G+ L + G+
Sbjct: 187 FKG--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 91 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 143
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 144 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 198
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 255
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 256 WCLALRP 262
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L+E++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ +++DFG+A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 80
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 139
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 140 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 193
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAK-VQHKNLVR 133
+++ +G G FG V++ L + DE+A+K++ R KN L I + V+H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVD 96
Query: 134 LLGCCIERDEKL------LIYEYLPNK----SLDFFLFDATKRVLLELGTRLQIIEGIVE 183
L +K L+ EY+P S + T +LL +L + + ++
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL---IKLYMYQ-LLR 152
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFG 242
L Y+H + I HRD+K N+LLD K+ DFG A+I E N + + +
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY- 206
Query: 243 YIPPEYVYQGI-CSIKSDVFSFGMLLLEILSGK 274
Y PE ++ + D++S G ++ E++ G+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 89
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 148
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 149 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 202
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 75 FSDTNKLGEGGFGPVYK-------------GVLAKGDEIAVKRLSVRSRQGLQELKNEAL 121
+ K+GEG +G V+K L D+ +K++++R + L++LK
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK---- 60
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGI 181
H NLV LL + L++EY + L D +R + E + I
Sbjct: 61 ------HPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK-SITWQT 111
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
++ + + H H+ IHRD+K NIL+ K K+ DFG AR+ G S + VA +
Sbjct: 112 LQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG-PSDYYDDEVATRW 167
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
P V DV++ G + E+LSG
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQGLQELKNEALVIAKVQHKNL 131
+ + D LG GG G V+ V D+ +A+K++ + Q ++ E +I ++ H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 132 VRL--------------LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQI 177
V++ +G E + ++ EY+ + + LLE RL +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARLFM 126
Query: 178 IEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKE-MKPKISDFGMARIFKGNES-KANTN 235
+ ++ GL Y+H ++HRDLK +N+ ++ E + KI DFG+ARI + S K + +
Sbjct: 127 YQ-LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 236 RVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T Y P + K+ D+++ G + E+L+GK
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 189
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 23 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 135
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 136 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCG 186
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 81
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 140
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 141 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 194
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 104
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 163
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 164 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 217
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 119 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 171
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 172 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 226
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 283
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 284 WCLALRP 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 194
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 51/255 (20%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G+G FG VY G + A+K LS + Q ++ E L++ + H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLF------------DATKRVLLELGTRLQIIEGIVE 183
G +L E LP+ L + + T + L+ G + +
Sbjct: 89 GI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQ------VAR 135
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE----SKANTNRVAG 239
G+ YL + + +HRDL A N +LD+ K++DFG+AR E + R+
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVASKI 299
+ + Y+ + KSDV+SFG+LL E+L+ Y I+ +D T ++
Sbjct: 193 KWTALESLQTYR--FTTKSDVWSFGVLLWELLTRGAPP------YRHIDPFDLTHFLAQG 244
Query: 300 KLVESCLARPFRQYC 314
+ + P +YC
Sbjct: 245 RRL------PQPEYC 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 92 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 144
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 145 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 199
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 256
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 257 WCLALRP 263
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 189
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 110
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 169
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 223
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 192
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 92 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 144
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 145 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 199
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 256
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 257 WCLALRP 263
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 186
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 72 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 124
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 125 HCHN-XGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 179
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 236
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 237 WCLALRP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 124 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 176
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 177 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 231
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 288
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 289 WCLALRP 295
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G E + +I E L FL ++ L+L + + + L YL R
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 569
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E P D F F + L E R Q++E +
Sbjct: 99 IRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV------R 151
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 152 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 206
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+ + + L+
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSXECQHLIR 263
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 264 WCLALRP 270
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G I + +I E L FL ++ L+L + + + L YL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 191
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 81 LGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNL 131
LG GGFG VY G+ + +A+K + EL N E +++ KV +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 132 VRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYL 188
+RLL D +LI E + D F F + L E R Q++E +
Sbjct: 76 IRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQVLEAV------R 128
Query: 189 HLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
H H+ ++HRD+K NIL+D + K+ DFG + K GT Y PPE
Sbjct: 129 HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPE 183
Query: 248 YV-YQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVE 303
++ Y + V+S G+LL +++ G + F H + I G + + +V+S+ + L+
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIR 240
Query: 304 SCLA-RP 309
CLA RP
Sbjct: 241 WCLALRP 247
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 112
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 171
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 172 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 225
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 80 KLGEGGFGPVYK-GVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
+LG G +G V K + G +AVKR+ +V S++ + L + + + V V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 137 CCIERDEKLLIYEYLPNKSLDFF---LFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
+ + E + + SLD F + D + + ++ ++ + IV+ L HLHS+
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALE--HLHSK 172
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV---- 249
+ +IHRD+K SN+L++ + K+ DFG++ + +K AG Y+ PE +
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID---AGCKPYMAPERINPEL 229
Query: 250 YQGICSIKSDVFSFGMLLLEI 270
Q S+KSD++S G+ ++E+
Sbjct: 230 NQKGYSVKSDIWSLGITMIEL 250
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 69
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 70 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 116 AKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 170 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 155
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 214
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 215 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 268
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 79
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 80 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 125
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 179
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 180 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ R +EL+ ++ K+ H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCNIV 114
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 173
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 174 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 227
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 58 TAHLDQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+P + F +R+ E R +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 170
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 171 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 221
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 69
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 70 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 170 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 26/226 (11%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGL 113
VE P + + +F D LG G F V +LA+ +A+K ++ ++ +G
Sbjct: 5 VEGPRWKQAEDIRDIYDFRDV--LGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGK 59
Query: 114 Q-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD--ATKRVLLE 170
+ ++NE V+ K++H N+V L LI + + L FD K E
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNIL---LDKEMKPKISDFGMARIFKG 227
I + +++ + YLH + I+HRDLK N+L LD++ K ISDFG++++
Sbjct: 116 RDASRLIFQ-VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 228 NESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ + + GT GY+ PE + Q S D +S G++ +L G
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 81 LGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGLQE-LKNEALVIAKVQHKNLVRLL 135
+GEG FG V++G+ + +A+K + ++E EAL + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 136 GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVR 195
G E + +I E L FL ++ L+L + + + L YL R
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 196 IIHRDLKASNILLDKEMKPKISDFGMARIFKGNE-SKANTNRVAGTFGYIPPEYVYQGIC 254
+HRD+ A N+L+ K+ DFG++R + + KA+ ++ ++ PE +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP--IKWMAPESINFRRF 569
Query: 255 SIKSDVFSFGMLLLEIL 271
+ SDV+ FG+ + EIL
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 74 NFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
+++DT +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 133 RLLGCCIERDEKL------LIYEYLPNKSLDFFL-FDATKRVLLELGTRLQIIEGIVEGL 185
RL EK L+ +Y+P + K+ L + +L + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYI 244
Y+H I HRD+K N+LLD + K+ DFG A+ E N + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YR 189
Query: 245 PPEYVYQGICSIKS-DVFSFGMLLLEILSGKK 275
PE ++ S DV+S G +L E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 93
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 94 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 139
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 193
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 194 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 74 NFSDTNKLGEGGFGPV--YKGVLAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQHK 129
N+ +G+G F V + +L G E+AVK + + + LQ+L E + + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 130 NLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
N+V+L IE ++ L L+ EY + +L + E + + IV + Y
Sbjct: 74 NIVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYC 129
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK-GNESKANTNRVAGTFGYIPPE 247
H + I+HRDLKA N+LLD + KI+DFG + F GN+ A G Y PE
Sbjct: 130 H---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAPE 182
Query: 248 YVYQG--ICSIKSDVFSFGMLLLEILSG 273
++QG + DV+S G++L ++SG
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 92
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 93 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 138
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 192
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 193 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+AGT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 132
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 133 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 182 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 132
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 133 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 182 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+G+G FG V++G +G+E+AVK S R R +E + V+ ++H+N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-- 65
Query: 140 ERDEK--------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL- 190
D K L+ +Y + SL FD R + + +++ GL +LH+
Sbjct: 66 --DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 191 ----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT-----NRVAGTF 241
+ I HRDLK+ NIL+ K I+D G+A ++S +T N GT
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTK 176
Query: 242 GYIPPEYVYQGI------CSIKSDVFSFGMLLLEI 270
Y+ PE + I ++D+++ G++ EI
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 81 LGEGGFGPVYKGVLAK-GD-------EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
LG+G F ++KGV + GD E+ +K L R + A +++K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C+ DE +L+ E++ SLD +L + + + +L++ + + + +L ++
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA--NTNRVAGTFGYIPPEYVY 250
+IH ++ A NILL +E K + ++ S + + ++PPE +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 251 QGI-CSIKSDVFSFGMLLLEILSG 273
++ +D +SFG L EI SG
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGL 113
VE P + + +F D LG G F V +LA+ +A+K ++ + +G
Sbjct: 5 VEGPRWKQAEDIRDIYDFRDV--LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGK 59
Query: 114 Q-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-ATKRVLLEL 171
+ ++NE V+ K++H N+V L LI + + L FD ++
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 172 GTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNIL---LDKEMKPKISDFGMARIFKGN 228
++I +++ + YLH + I+HRDLK N+L LD++ K ISDFG++++
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---E 169
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ + + GT GY+ PE + Q S D +S G++ +L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+G+G FG V++G +G+E+AVK S R R +E + V+ ++H+N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-- 66
Query: 140 ERDEK--------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL- 190
D K L+ +Y + SL FD R + + +++ GL +LH+
Sbjct: 67 --DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 191 ----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT-----NRVAGTF 241
+ I HRDLK+ NIL+ K I+D G+A ++S +T N GT
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTK 177
Query: 242 GYIPPEYVYQGI------CSIKSDVFSFGMLLLEI 270
Y+ PE + I ++D+++ G++ EI
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+G+G FG V++G +G+E+AVK S R R +E + V+ ++H+N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-- 71
Query: 140 ERDEK--------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL- 190
D K L+ +Y + SL FD R + + +++ GL +LH+
Sbjct: 72 --DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 191 ----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT-----NRVAGTF 241
+ I HRDLK+ NIL+ K I+D G+A ++S +T N GT
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTK 182
Query: 242 GYIPPEYVYQGI------CSIKSDVFSFGMLLLEI 270
Y+ PE + I ++D+++ G++ EI
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 132
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 133 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 182 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGL 113
VE P + + +F D LG G F V +LA+ +A+K ++ + +G
Sbjct: 5 VEGPRWKQAEDIRDIYDFRDV--LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGK 59
Query: 114 Q-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-ATKRVLLEL 171
+ ++NE V+ K++H N+V L LI + + L FD ++
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 172 GTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNIL---LDKEMKPKISDFGMARIFKGN 228
++I +++ + YLH + I+HRDLK N+L LD++ K ISDFG++++
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---E 169
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ + + GT GY+ PE + Q S D +S G++ +L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V L +L + ++ EY P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 26 TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 83
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 84 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 129
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 183
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 184 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 132
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 133 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 182 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 134
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 135 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 184 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 80
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 81 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 126
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ + T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 181 -HTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 21 TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 79 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 124
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 178
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 179 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 80
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 81 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 126
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ + T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 181 -HTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 51/232 (21%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAG---TFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ +AG T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 51/232 (21%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAG---TFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ +AG T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 111/198 (56%), Gaps = 18/198 (9%)
Query: 80 KLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQELKNEAL----VIAKVQHKNLVRL 134
K+GEG +G V+K + EI A+KR VR + + + AL ++ +++HKN+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKR--VRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 135 LGCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
+ D+KL L++E+ ++ L + FD+ L + + + +++GL + H SR
Sbjct: 67 HDV-LHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQ-LLKGLGFCH--SR 120
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQG- 252
++HRDLK N+L+++ + K+++FG+AR F G + + V T Y PP+ ++
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 253 ICSIKSDVFSFGMLLLEI 270
+ S D++S G + E+
Sbjct: 178 LYSTSIDMWSAGCIFAEL 195
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+G+G FG V++G +G+E+AVK S R R +E + V+ ++H+N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-- 91
Query: 140 ERDEK--------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL- 190
D K L+ +Y + SL FD R + + +++ GL +LH+
Sbjct: 92 --DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 191 ----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT-----NRVAGTF 241
+ I HRDLK+ NIL+ K I+D G+A ++S +T N GT
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTK 202
Query: 242 GYIPPEYVYQGI------CSIKSDVFSFGMLLLEI 270
Y+ PE + I ++D+++ G++ EI
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 140
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 141 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 189
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 190 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 132
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 133 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 182 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 80
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 81 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 126
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ + T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 181 -HTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 51/232 (21%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 69
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 70 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 227 GNESKANTNRVAG---TFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ +AG T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 170 -----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+G+G FG V++G +G+E+AVK S R R +E + V+ ++H+N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-- 68
Query: 140 ERDEK--------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL- 190
D K L+ +Y + SL FD R + + +++ GL +LH+
Sbjct: 69 --DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 191 ----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT-----NRVAGTF 241
+ I HRDLK+ NIL+ K I+D G+A ++S +T N GT
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTK 179
Query: 242 GYIPPEYVYQGI------CSIKSDVFSFGMLLLEI 270
Y+ PE + I ++D+++ G++ EI
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRS-RQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
+G+G FG V++G +G+E+AVK S R R +E + V+ ++H+N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-- 104
Query: 140 ERDEK--------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL- 190
D K L+ +Y + SL FD R + + +++ GL +LH+
Sbjct: 105 --DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 191 ----HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT-----NRVAGTF 241
+ I HRDLK+ NIL+ K I+D G+A ++S +T N GT
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTK 215
Query: 242 GYIPPEYVYQGI------CSIKSDVFSFGMLLLEI 270
Y+ PE + I ++D+++ G++ EI
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 79 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 124
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 178
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 179 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQTQVA 296
+ GT Y+ PE + + D ++ G+L+ E+ +G F+ + I Y++ V+
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQI--YEKI-VS 252
Query: 297 SKIKL---VESCLARPFRQYCCILKVRTFGFNLPNALN 331
K++ S L R + + FG NLPN +N
Sbjct: 253 GKVRFPSHFSSDLKDLLRNLLQVDLTKRFG-NLPNGVN 289
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 58 VELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDE----IAVKRLSVRSRQGL 113
VE P + + +F D LG G F V +LA+ +A+K ++ + +G
Sbjct: 5 VEGPRWKQAEDIRDIYDFRDV--LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGK 59
Query: 114 Q-ELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-ATKRVLLEL 171
+ ++NE V+ K++H N+V L LI + + L FD ++
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE 115
Query: 172 GTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNIL---LDKEMKPKISDFGMARIFKGN 228
++I +++ + YLH + I+HRDLK N+L LD++ K ISDFG++++
Sbjct: 116 RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---E 169
Query: 229 ESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ + + GT GY+ PE + Q S D +S G++ +L G
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 93
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 94 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 139
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 193
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 194 --HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 131 L-----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
+ V ++ +E D KLL ++L N + +FL+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 152
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 153 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 201
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 202 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 79 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 124
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 178
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 179 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 81 LGEGGFGPVYKGVLAKGD--------EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
LG+GG+G V++ G ++ K + VR+ + K E ++ +V+H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 133 RLLGCCIERDEKLLIYEYLPNKSL-------DFFLFDATKRVLLELGTRLQIIEGIVEGL 185
L+ + LI EYL L F+ D L E+ L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--------- 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
HLH + II+RDLK NI+L+ + K++DFG+ + + T+ GT Y+
Sbjct: 136 ---HLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMA 189
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSG 273
PE + + + D +S G L+ ++L+G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
+ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ K++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 81 LGEGGFGPVYKGVLAKGD--------EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
LG+GG+G V++ G ++ K + VR+ + K E ++ +V+H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 133 RLLGCCIERDEKLLIYEYLPNKSL-------DFFLFDATKRVLLELGTRLQIIEGIVEGL 185
L+ + LI EYL L F+ D L E+ L
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--------- 135
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
HLH + II+RDLK NI+L+ + K++DFG+ + + T+ GT Y+
Sbjct: 136 ---HLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMA 189
Query: 246 PEYVYQGICSIKSDVFSFGMLLLEILSG 273
PE + + + D +S G L+ ++L+G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY P + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGXVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V L +L + ++ EY P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKX 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 38 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V L +L + ++ EY P + F +R+ E R +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+++D++ K++DFG A+ KG T + G
Sbjct: 151 IV---LTFEYLHS-LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 201
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 23 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 80
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 81 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 126
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 180
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 181 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 21 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 78
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 79 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 124
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 178
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 179 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 79
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 80 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 125
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 179
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 180 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 15 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 72
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 73 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 118
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 172
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 173 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 84
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 85 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--- 184
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 185 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 79
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 80 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 125
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 179
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 180 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKX 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 85
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 86 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 131
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 186 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 70
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 71 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 116
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 170
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 171 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 85
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 86 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 131
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 186 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 12 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 69
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 70 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 169
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 170 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 28 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELR-- 85
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 86 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 131
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 186 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 22 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 79
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 80 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 125
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--- 179
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 180 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 75
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 76 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 175
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 176 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 75
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 76 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 175
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 176 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQG-----LQELK--------- 117
+++ + +GEG +G V Y V +A+K++S Q L+E+K
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 118 ----NEALVIAKVQHKNLVRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
N+ + ++ V ++ +E D KLL ++L N + +FL+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 134
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 135 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 184 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 13 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 70
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 71 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 116
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 170
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 171 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 136
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 137 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 186
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 187 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 27 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 84
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 85 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 184
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 185 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 75
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 76 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 175
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 176 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 18 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 75
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 76 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--- 175
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 176 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 80 KLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+LG G FG V++ V A G K ++ +KNE ++ ++ H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 139 IERDEKLLIYEYLPNKSLDFFLFD--ATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
++ E +LI E+L LFD A + + + + EGL ++H HS I
Sbjct: 118 EDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---I 170
Query: 197 IHRDLKASNILLD--KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGIC 254
+H D+K NI+ + K KI DFG+A +E T T + PE V +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT---TATAEFAAPEIVDREPV 227
Query: 255 SIKSDVFSFGMLLLEILSG 273
+D+++ G+L +LSG
Sbjct: 228 GFYTDMWAIGVLGYVLLSG 246
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 14 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 71
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 72 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 117
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 118 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 171
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 172 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 136
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 137 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 186
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 187 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 96
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 97 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 142
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 196
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 197 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 137
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 138 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 187
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 188 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 138
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 139 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 188
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 189 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 129
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 130 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 179
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 180 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 136
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 137 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 187 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 130
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 131 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 180
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 181 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 35 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 92
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 93 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 138
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 192
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 193 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 130
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 131 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 180
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 181 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 29 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 85
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 141
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 142 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 192
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 55/228 (24%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKN 130
+++ + +GEG +G V Y V +A+K++S Q Q E ++ + +H+N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 131 LV---------------------RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLL 169
++ L+G + KLL ++L N + +FL+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLY---KLLKTQHLSNDHICYFLYQ------- 152
Query: 170 ELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNE 229
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 153 -----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 198
Query: 230 SKAN--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 199 DHTGFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQG-----LQELK--------- 117
+++ + +GEG +G V Y V +A+K++S Q L+E+K
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 118 ----NEALVIAKVQHKNLVRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELG 172
N+ + ++ V ++ +E D KLL ++L N + +FL+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------- 134
Query: 173 TRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 135 --------ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT 183
Query: 233 N--TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 184 GFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 36 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 93
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 94 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 139
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 193
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 194 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 63 FSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI--AVKRLSVRSRQGLQELKNEA 120
F S+ ++ N +G G +G V K + KG I A K++ + + K E
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
++ + H N++RL + + L+ E L F KRV E +I++
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRE-SDAARIMKD 131
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILL--DKEMKP-KISDFGMARIFKGNESKANTNRV 237
++ + Y H ++ + HRDLK N L D P K+ DFG+A FK K +V
Sbjct: 132 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMMRTKV 186
Query: 238 AGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
GT Y+ P+ V +G+ + D +S G+++ +L G
Sbjct: 187 -GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKN------EALVIAKVQ----HK 129
LG+GGFG V+ G L ++A+K + G L + E ++ KV H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRL---QIIEGIVEGLL 186
++RLL E E ++ P + D F + K L E +R Q++ I
Sbjct: 99 GVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ---- 153
Query: 187 YLHLHSRVRIIHRDLKASNILLD-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
H HSR ++HRD+K NIL+D + K+ DFG + +E + + GT Y P
Sbjct: 154 --HCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFD---GTRVYSP 206
Query: 246 PEYVY-QGICSIKSDVFSFGMLLLEILSG 273
PE++ ++ + V+S G+LL +++ G
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 81 LGEGGFGPVYKGVLAK-GD-------EIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLV 132
LG+G F ++KGV + GD E+ +K L R + A +++K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHS 192
G C DE +L+ E++ SLD +L + + + +L++ + + + +L ++
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFLEENT 133
Query: 193 RVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA--NTNRVAGTFGYIPPEYVY 250
+IH ++ A NILL +E K + ++ S + + ++PPE +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 251 QGI-CSIKSDVFSFGMLLLEILSG 273
++ +D +SFG L EI SG
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + +G G +G V K G +IAVK+LS + +++ +EL+
Sbjct: 45 TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELR-- 102
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P SL+ F ++ T + +L ++
Sbjct: 103 --LLKHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKC 148
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 202
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGI-CSIKSDVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 203 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ----------- 136
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 137 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 187 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR--IFKGNESKANTNRVA 238
I GL +L II+RDLK N++LD E KI+DFGM + I+ G T
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 182
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
GT YI PE + D ++FG+LL E+L+G+ E
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRL--SVRSRQGLQELKNEALVIAKVQH 128
++ +LG G +G V K + G AVKR+ +V S++ + L + + V
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF---LFDATKRVLLELGTRLQIIEGIVEGL 185
V G R+ + I L + SLD F + D + + ++ ++ + IV+ L
Sbjct: 93 PFTVTFYGALF-REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKAL 149
Query: 186 LYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIP 245
HLHS++ +IHRD+K SN+L++ + K DFG++ + +K + AG Y
Sbjct: 150 E--HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK---DIDAGCKPYXA 204
Query: 246 PEYV----YQGICSIKSDVFSFGMLLLEI 270
PE + Q S+KSD++S G+ +E+
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR--IFKGNESKANTNRVA 238
I GL +L II+RDLK N++LD E KI+DFGM + I+ G T
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 503
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTE 278
GT YI PE + D ++FG+LL E+L+G+ E
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 45/221 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRL------SVRSRQGLQELKNEALVIAKVQ 127
+ D +G G +G V V + G ++A+K+L + +++ +EL+ ++ ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR----LLKHMR 82
Query: 128 HKNLVRLLGCCIERDEKLLIYEYLPNKSLD----FFLF------DATKRVLLE-LG-TRL 175
H+N++ LL + P+++LD F+L D K + E LG R+
Sbjct: 83 HENVIGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRI 130
Query: 176 Q-IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANT 234
Q ++ +++GL Y+H IIHRDLK N+ ++++ + KI DFG+AR ++ +
Sbjct: 131 QFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEM 182
Query: 235 NRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T Y PE + + ++ D++S G ++ E+++GK
Sbjct: 183 XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 184 GLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
GL +LH + II+RDLK N++LD E KI+DFGM + + T GT Y
Sbjct: 132 GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDY 186
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
I PE + D +++G+LL E+L+G+
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 72/268 (26%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGD-EIAVKRLSVRSRQGLQE-LKNEALVIAKVQHKN 130
+F +G GGFG V++ D A+KR+ + +R+ +E + E +AK++H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 131 LVRLLGCCIERDEKLLIYE----YLPNKSLDFFL-----FDA------------------ 163
+VR +E + E +L ++S D+ L DA
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 164 -----TKRVLL-------------------------ELGTRLQIIEGIVEGLLYLHLHSR 193
+ +V L E G L I I E + +LH
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG- 184
Query: 194 VRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK----------ANTNRVAGTFGY 243
++HRDLK SNI + K+ DFG+ +E + A GT Y
Sbjct: 185 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLY 242
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEIL 271
+ PE ++ S K D+FS G++L E+L
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLAKGDEI-AVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
++F + LG+G FG V K A A+K++ + + L + +E ++A + H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQY 63
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFD-ATKRVLLEL----------GTRLQIIE 179
+VR +ER + + KS F + R L +L ++
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR-------IFKGNE--- 229
I+E L Y+H IIHR+LK NI +D+ KI DFG+A+ I K +
Sbjct: 124 QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 230 --SKANTNRVAGTFGYIPPEYVY-QGICSIKSDVFSFGMLLLEIL 271
S N GT Y+ E + G + K D +S G++ E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 111
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 167
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 168 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 39 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 96
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 97 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 142
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 196
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 197 --HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 45/223 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 136
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 137 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 234 -TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T Y PE + KS D++S G +L E+LS +
Sbjct: 187 FLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 45/223 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQG-LQELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A+K++S Q Q E ++ + +H+N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 137
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 138 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 187
Query: 234 -TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T Y PE + KS D++S G +L E+LS +
Sbjct: 188 FLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI D+G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 26/203 (12%)
Query: 81 LGEGGFGPVY--KGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LG G F V+ K L G A+K + L+NE V+ K++H+N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-----IIEGIVEGLLYLHLHSR 193
L+ + + L FD +LE G + +I+ ++ + YLH +
Sbjct: 76 ESTTHYYLVMQLVSGGEL----FDR----ILERGVYTEKDASLVIQQVLSAVKYLHENG- 126
Query: 194 VRIIHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
I+HRDLK N+L ++ K I+DFG++++ E + GT GY+ PE +
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLA 180
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
Q S D +S G++ +L G
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCG 203
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 79 NKLGEGGFGPVYKGVLAKGDEI--AVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLG 136
N +G G +G V K + KG I A K++ + + K E ++ + H N++RL
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 137 CCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRI 196
+ + L+ E L F KRV E +I++ ++ + Y H ++ +
Sbjct: 74 TFEDNTDIYLVMELCTGGEL--FERVVHKRVFRE-SDAARIMKDVLSAVAYCH---KLNV 127
Query: 197 IHRDLKASNILL--DKEMKP-KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGI 253
HRDLK N L D P K+ DFG+A FK K +V GT Y+ P+ V +G+
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMMRTKV-GTPYYVSPQ-VLEGL 183
Query: 254 CSIKSDVFSFGMLLLEILSG 273
+ D +S G+++ +L G
Sbjct: 184 YGPECDEWSAGVMMYVLLCG 203
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 30/271 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGL---QELKN---EALVIAKV 126
++F +G+G FG V ++ K D + + ++Q E++N E ++ +
Sbjct: 15 DHFEILRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 127 QHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
+H LV L + ++ ++ + L L + L + V + T I +V L
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMALD 129
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPP 246
YL RIIHRD+K NILLD+ I+DF +A + E++ T +AGT Y+ P
Sbjct: 130 YL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT--MAGTKPYMAP 183
Query: 247 EYVYQ---GICSIKSDVFSFGMLLLEILSGKK---------NTEFYHTGYLSINGYDQTQ 294
E S D +S G+ E+L G++ + E HT ++ Y
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243
Query: 295 VASKIKLVESCL-ARPFRQYCCILKVRTFGF 324
+ L++ L P +++ + V+ F +
Sbjct: 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 45/223 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL- 131
++ +GEG +G V + +A+K++S Q Q E ++ + +H+N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 132 ----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGTR 174
V ++ +E D KLL + L N + +FL+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ------------ 152
Query: 175 LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN- 233
I+ GL Y+H ++HRDLK SN+L++ KI DFG+ARI
Sbjct: 153 ------ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF 203
Query: 234 -TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 204 LTEXVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSV---RSRQGL--QELKNEALVIAKVQHKNLVRL 134
+G+G F V + + G + AVK + V S GL ++LK EA + ++H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV----LLELGTRLQIIEGIVEGLLYLHL 190
L +++E++ L F+ KR + + I+E L Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 191 HSRVRIIHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
++ IIHRD+K N+LL + K+ DFG+A I G RV GT ++ PE
Sbjct: 149 NN---IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRV-GTPHFMAPE 203
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V + DV+ G++L +LSG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 21 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 77
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 133
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 134 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-----RTWX 184
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 75 FSDTNKLGEGGFGPVYKGV--LAKGDEIAVKRLSVRSRQGL-QELKNEALVIAKVQHKNL 131
+++ + +GEG +G V L K +A++++S Q Q E ++ + +H+N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 132 -----------------VRLLGCCIERD-EKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
V ++ +E D KLL ++L N + +FL+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 136
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
I+ GL Y+H ++HRDLK SN+LL+ KI DFG+AR+ +
Sbjct: 137 -------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 234 --TNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
T VA T Y PE + KS D++S G +L E+LS +
Sbjct: 187 FLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 35 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 147
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 148 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 198
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 53/234 (22%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGP-VYKGVLAKGDEIAVKRL-------SVRSRQGLQELK 117
S V +F + LG G G VY+G+ D +AVKR+ + R Q L+E
Sbjct: 17 SVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESD 75
Query: 118 NEALVIAKVQHKNLVRLLGCCIERDEKL----------LIYEYLPNKSLDFFLFDATKRV 167
+H N++R C E+D + + EY+ K DF
Sbjct: 76 ---------EHPNVIRYF--CTEKDRQFQYIAIELCAATLQEYVEQK--DFAHLGLEPIT 122
Query: 168 LLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLD-----KEMKPKISDFGMA 222
LL+ Q G+ HLHS + I+HRDLK NIL+ ++K ISDFG+
Sbjct: 123 LLQ-----QTTSGLA------HLHS-LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170
Query: 223 -RIFKGNESKANTNRVAGTFGYIPPEYVYQGI---CSIKSDVFSFGMLLLEILS 272
++ G S + + V GT G+I PE + + + D+FS G + ++S
Sbjct: 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 114 QELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
+E+ NE ++ + H N+++L ++ L+ E+ L R +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL---FEQIINRHKFDECD 147
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKE---MKPKISDFGMARIFKGNES 230
I++ I+ G+ YLH H+ I+HRD+K NILL+ + + KI DFG++ F +
Sbjct: 148 AANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 231 KANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT YI PE V + + K DV+S G+++ +L G
Sbjct: 205 LRDR---LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 111
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 167
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 168 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWT 218
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALV-IAKVQHKNLV 132
+ +LG G FG V++ + G + AVK++ L+ + E LV A + +V
Sbjct: 74 MTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 127
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFD----ATKRVLLELGTRLQIIEGIVEGLLYL 188
L G E + E L SL + R L LG L EGL YL
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-------EGLEYL 180
Query: 189 HLHSRVRIIHRDLKASNILLDKE-MKPKISDFGMARIFKGN---ESKANTNRVAGTFGYI 244
H RI+H D+KA N+LL + + + DFG A + + +S + + GT ++
Sbjct: 181 HTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 237
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSI 287
PE V C K D++S ++L +L+G Y G L +
Sbjct: 238 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DF +AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKS 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI DFG+ R
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+++D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 69 AAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---NEAL 121
A + F LG G FG V +L K G+ A+K L + L++++ NE
Sbjct: 37 TAHLDQFERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 122 VIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQIIE 179
++ V LV+L + ++ EY+ + F +R+ E R +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 180 GIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG 239
+ L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T + G
Sbjct: 150 IV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 200
Query: 240 TFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T Y+ PE + + D ++ G+L+ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ PE + + D ++ G+L+ ++ +G
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 26/224 (11%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALV-IAKVQHKNLV 132
+ ++G G FG V++ + G + AVK++ L+ + E LV A + +V
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 129
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFD----ATKRVLLELGTRLQIIEGIVEGLLYL 188
L G E + E L SL + R L LG L EGL YL
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-------EGLEYL 182
Query: 189 HLHSRVRIIHRDLKASNILLDKE-MKPKISDFGMARIFKGN---ESKANTNRVAGTFGYI 244
H RI+H D+KA N+LL + + + DFG A + + +S + + GT ++
Sbjct: 183 HTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 239
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSIN 288
PE V C K D++S ++L +L+G Y G L +
Sbjct: 240 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALV-IAKVQHKNLV 132
+ ++G G FG V++ + G + AVK++ L+ + E LV A + +V
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIV 113
Query: 133 RLLGCCIERDEKLLIYEYLPNKSLDFFLFD----ATKRVLLELGTRLQIIEGIVEGLLYL 188
L G E + E L SL + R L LG L EGL YL
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-------EGLEYL 166
Query: 189 HLHSRVRIIHRDLKASNILLDKE-MKPKISDFGMARIFKGN---ESKANTNRVAGTFGYI 244
H RI+H D+KA N+LL + + + DFG A + + +S + + GT ++
Sbjct: 167 HTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHM 223
Query: 245 PPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSI 287
PE V C K D++S ++L +L+G Y G L +
Sbjct: 224 APEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI FG+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT Y+ P + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 53 STKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEI----AVKRLS-- 106
+ K E+ + + NF LG G +G V+ G + A+K L
Sbjct: 34 TVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA 93
Query: 107 --VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKL-LIYEYLPNKSLDFFLFDA 163
V+ + + + E V+ ++ + L + + KL LI +Y+ L F +
Sbjct: 94 TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLS 151
Query: 164 TKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR 223
+ E ++ + E IV L +LH ++ II+RD+K NILLD ++DFG+++
Sbjct: 152 QRERFTEHEVQIYVGE-IVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207
Query: 224 IFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKS--DVFSFGMLLLEILSG 273
F +E++ + GT Y+ P+ V G D +S G+L+ E+L+G
Sbjct: 208 EFVADETERAYD-FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 47/221 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA--TKRVLLELGTR---- 174
KN++ LL + P KSL+ F L DA ++ + +EL
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 175 --LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
Q++ GI HLHS IIHRDLK SNI++ + KI DFG+AR S
Sbjct: 131 LLYQMLVGIK------HLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFM 181
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T V + Y PE + D++S G+++ E++ G
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 47/221 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA--TKRVLLELGTR---- 174
KN++ LL + P KSL+ F L DA ++ + +EL
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 175 --LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
Q++ GI HLHS IIHRDLK SNI++ + KI DFG+AR S
Sbjct: 131 LLYQMLVGIK------HLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFM 181
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T V + Y PE + D++S G+++ E++ G
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+LG G FG V++ + G + AVK++ + + E + A + +V L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIVPLYGAV 154
Query: 139 IERDEKLLIYEYLPNKSLDFFLFD----ATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
E + E L SL + + R L LG L EGL YLH SR
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQAL-------EGLEYLH--SR- 204
Query: 195 RIIHRDLKASNILLDKE-MKPKISDFGMARIFKGN---ESKANTNRVAGTFGYIPPEYVY 250
RI+H D+KA N+LL + + DFG A + + +S + + GT ++ PE V
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 251 QGICSIKSDVFSFGMLLLEILSG-KKNTEFY 280
C K DV+S ++L +L+G T+F+
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 295
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 67 SVAAATNNFSDTNKLGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNE 119
++ + + + +G G +G V K G +AVK+LS + +++ +EL+
Sbjct: 16 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR-- 73
Query: 120 ALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ- 176
++ ++H+N++ LL + P +SL+ F ++ T + +L ++
Sbjct: 74 --LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 177 ----------IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFK 226
+I I+ GL Y+H IIHRDLK SN+ ++++ + KI D G+AR
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR--- 173
Query: 227 GNESKANTNRVAGTFGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
+ T VA T Y PE + + ++ D++S G ++ E+L+G+
Sbjct: 174 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQEL-KNEALVIAKVQHKNLVRLLGCCI 139
LG G FG V++ V + + + V+ + Q L K E ++ +H+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF-VKVKGTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTR--LQIIEGIVEGLLYLHLHSRVRII 197
+E ++I+E++ LD +F+ EL R + + + E L +LH H+ I
Sbjct: 72 SMEELVMIFEFISG--LD--IFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IG 124
Query: 198 HRDLKASNILLD--KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
H D++ NI+ + KI +FG AR K + N + Y PE + S
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVS 181
Query: 256 IKSDVFSFGMLLLEILSG 273
+D++S G L+ +LSG
Sbjct: 182 TATDMWSLGTLVYVLLSG 199
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 81 LGEGGFGPVYKGVLAKGDE-IAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LGEG F K V K ++ AVK +S R Q+ + AL + + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK-EITALKLCE-GHPNIVKLHEVFH 76
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-IIEGIVEGLLYLHLHSRVRIIH 198
++ L+ E L L F+ K+ T I+ +V + ++H V ++H
Sbjct: 77 DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVH 129
Query: 199 RDLKASNILLDKE---MKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICS 255
RDLK N+L E ++ KI DFG AR+ + T T Y PE + Q
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFTLHYAAPELLNQNGYD 187
Query: 256 IKSDVFSFGMLLLEILSGK 274
D++S G++L +LSG+
Sbjct: 188 ESCDLWSLGVILYTMLSGQ 206
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 65 FSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALV 122
F S++ +S ++G GG V++ + K A+K +++ Q L +NE
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 123 IAKVQHKN--LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
+ K+Q + ++RL I D+ + + N L+ +L K+ ++ R +
Sbjct: 80 LNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++E + +H H I+H DLK +N L+ M K+ DFG+A + + + + GT
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 241 FGYIPPEYVYQGICSIKS-----------DVFSFGMLLLEILSGK 274
Y+PPE + S ++ DV+S G +L + GK
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVV 187
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 47/221 (21%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA--TKRVLLELGTR---- 174
KN++ LL + P KSL+ F L DA ++ + +EL
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 175 --LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKA 232
Q++ GI HLHS IIHRDLK SNI++ + KI DFG+AR S
Sbjct: 131 LLYQMLVGIK------HLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFM 181
Query: 233 NTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
T V + Y PE + D++S G ++ E++ G
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 66 SSVAAATNNFSDTNKLGEGGFGPVYKGVLAK----GDEIAVKRLSVRSRQGLQELK---N 118
S A + F LG G FG V +L K G+ A+K L + L++++ N
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 119 EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV--LLELGTRLQ 176
E ++ V LV+L + ++ EY+ + F +R+ E R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNR 236
+ + L + +LHS + +I+RDLK N+L+D++ +++DFG A+ KG T
Sbjct: 147 AAQIV---LTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWX 197
Query: 237 VAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ GT + PE + + D ++ G+L+ E+ +G
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 173 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVV 187
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 104/242 (42%), Gaps = 61/242 (25%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV A + F+ +G G G V + VL G +AVK+LS R Q
Sbjct: 9 QFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 T--KRVLLELGTR------LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPK 215
+ + +EL Q++ GI HLHS IIHRDLK SNI++ + K
Sbjct: 114 NLCQVIHMELDHERMSYLLYQMLCGIK------HLHS-AGIIHRDLKPSNIVVKSDCTLK 166
Query: 216 ISDFGMARIFKGNESKANTNRVAGTF----GYIPPEYVYQGICSIKSDVFSFGMLLLEIL 271
I DFG+AR A TN + + Y PE + + D++S G ++ E++
Sbjct: 167 ILDFGLAR-------TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
Query: 272 SG 273
G
Sbjct: 220 KG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVV 187
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 187
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 TKRVLLELGTRLQIIEGIVEGLLY--LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 173 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 80 KLGEGGFGPVYKGVLAK-GDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+LG G FG V++ + G + AVK++ + + E + A + +V L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIVPLYGAV 135
Query: 139 IERDEKLLIYEYLPNKSLDFFLFD----ATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
E + E L SL + + R L LG L EGL YLH SR
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQAL-------EGLEYLH--SR- 185
Query: 195 RIIHRDLKASNILLDKE-MKPKISDFGMARIFKGN---ESKANTNRVAGTFGYIPPEYVY 250
RI+H D+KA N+LL + + DFG A + + + + + GT ++ PE V
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 251 QGICSIKSDVFSFGMLLLEILSG-KKNTEFY 280
C K DV+S ++L +L+G T+F+
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 276
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 73 NNFSDTNKLGEGGFGPVYKGVLAKGDE--IAVKRLSVRSRQGLQELKNEALVIAKVQHKN 130
+F ++LG G +G V+K V +K D AVKR S + K+ A +A+V
Sbjct: 57 QSFQRLSRLGHGSYGEVFK-VRSKEDGRLYAVKR----SMSPFRGPKDRARKLAEVGSHE 111
Query: 131 LVRLLGCCIERDEK------LLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEG 184
V CC+ ++ L + L SL +A L E Q+ + +
Sbjct: 112 KVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHC-EAWGASLPEA----QVWGYLRDT 166
Query: 185 LLYL-HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGY 243
LL L HLHS+ ++H D+K +NI L + K+ DFG+ + G G Y
Sbjct: 167 LLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQE--GDPRY 222
Query: 244 IPPEYVYQGICSIKSDVFSFGMLLLEILSGKKNTEFYHTGYLSINGYDQ 292
+ PE + QG +DVFS G+ +LE+ N E H G G+ Q
Sbjct: 223 MAPE-LLQGSYGTAADVFSLGLTILEVAC---NMELPHGG----EGWQQ 263
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 80 KLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+LG G FG V++ A G+ A K + + ++ E ++ ++H LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ +E ++IYE++ L F A + + ++ + + +GL ++H ++ +H
Sbjct: 118 EDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 199 RDLKASNILL--DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI 256
DLK NI+ + + K+ DFG+ + K + GT + PE
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGY 229
Query: 257 KSDVFSFGMLLLEILSG 273
+D++S G+L +LSG
Sbjct: 230 YTDMWSVGVLSYILLSG 246
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 65 FSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALV 122
F S++ +S ++G GG V++ + K A+K +++ Q L +NE
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 123 IAKVQHKN--LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEG 180
+ K+Q + ++RL I D+ + + N L+ +L K+ ++ R +
Sbjct: 80 LNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++E + +H H I+H DLK +N L+ M K+ DFG+A + + + GT
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 241 FGYIPPEYVYQGICSIKS-----------DVFSFGMLLLEILSGK 274
Y+PPE + S ++ DV+S G +L + GK
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 81 LGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNEALVIAKVQHKNLVR 133
+G G +G V A+ ++AVK+LS + +R+ +EL+ ++ ++H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELR----LLKHLKHENVIG 91
Query: 134 LL-----GCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYL 188
LL IE ++ YL + L + K L ++ ++ GL Y+
Sbjct: 92 LLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 189 HLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEY 248
H IIHRDLK SN+ ++++ + +I DFG+AR ++ T Y PE
Sbjct: 148 H---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEI 199
Query: 249 VYQGICSIKS-DVFSFGMLLLEILSGK 274
+ + ++ D++S G ++ E+L GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 80 KLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
+LG G FG V++ A G+ A K + + ++ E ++ ++H LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 139 IERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIH 198
+ +E ++IYE++ L F A + + ++ + + +GL ++H ++ V H
Sbjct: 224 EDDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---H 278
Query: 199 RDLKASNILLD--KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSI 256
DLK NI+ + + K+ DFG+ + K + GT + PE
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGY 335
Query: 257 KSDVFSFGMLLLEILSG 273
+D++S G+L +LSG
Sbjct: 336 YTDMWSVGVLSYILLSG 352
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 187
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 45/215 (20%)
Query: 81 LGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNEALVIAKVQHKNLVR 133
+G G +G V A+ ++AVK+LS + +R+ +EL+ ++ ++H+N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELR----LLKHLKHENVIG 83
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ-----------IIEG 180
LL + P S++ F ++ T + +L ++ ++
Sbjct: 84 LLDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ 131
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++ GL Y+H IIHRDLK SN+ ++++ + +I DFG+AR ++ T
Sbjct: 132 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVAT 183
Query: 241 FGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
Y PE + + ++ D++S G ++ E+L GK
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 173 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 104/241 (43%), Gaps = 61/241 (25%)
Query: 65 FSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQE 115
F SV A + F+ +G G G V + VL G +AVK+LS R Q
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLS-RPFQNQTH 64
Query: 116 LKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDAT 164
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 65 AKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 112
Query: 165 --KRVLLELGTR------LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKI 216
+ + +EL Q++ GI HLHS IIHRDLK SNI++ + KI
Sbjct: 113 LCQVIHMELDHERMSYLLYQMLCGIK------HLHS-AGIIHRDLKPSNIVVKSDCTLKI 165
Query: 217 SDFGMARIFKGNESKANTNRVAGTF----GYIPPEYVYQGICSIKSDVFSFGMLLLEILS 272
DFG+AR A+TN + + Y PE + D++S G ++ E++
Sbjct: 166 LDFGLAR-------TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK 218
Query: 273 G 273
G
Sbjct: 219 G 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 84 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 131
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 132 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 188
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 189 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 58
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 59 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 106
Query: 164 TKRVLLELGTRLQIIEGIVEGLLY--LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 107 NLXQVIQMELDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGL 165
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 166 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 187
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
+ Y PE + D++S G ++ E++ G
Sbjct: 188 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 TKRVLLELGTRLQIIEGIVEGLLY--LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 173 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 80 KLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQ-ELKNEALVIAKVQHKNLVRLLGCC 138
K+G G +G VYK G + L G+ E ++ +++H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 139 IERDEK--LLIYEYLPNKSLDFFLFDAT-----KRVLLELGTRLQIIEGIVEGLLYLHLH 191
+ ++ L+++Y + F K V L G ++ I++G+ YLH +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 192 SRVRIIHRDLKASNILLDKE----MKPKISDFGMARIFKGN-ESKANTNRVAGTFGYIPP 246
++HRDLK +NIL+ E + KI+D G AR+F + A+ + V TF Y P
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 247 EYVYQGICSIKS-DVFSFGMLLLEILSGK 274
E + K+ D+++ G + E+L+ +
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 45/215 (20%)
Query: 81 LGEGGFGPVYKGVLAK-GDEIAVKRLS------VRSRQGLQELKNEALVIAKVQHKNLVR 133
+G G +G V A+ ++AVK+LS + +R+ +EL+ ++ ++H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELR----LLKHLKHENVIG 91
Query: 134 LLGCCIERDEKLLIYEYLPNKSLDFF--LFDATKRVLLELGTRLQ-----------IIEG 180
LL + P S++ F ++ T + +L ++ ++
Sbjct: 92 LLDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ 139
Query: 181 IVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGT 240
++ GL Y+H IIHRDLK SN+ ++++ + +I DFG+AR ++ T
Sbjct: 140 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVAT 191
Query: 241 FGYIPPEYVYQGICSIKS-DVFSFGMLLLEILSGK 274
Y PE + + ++ D++S G ++ E+L GK
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKN-- 130
+S ++G GG V++ + K A+K +++ Q L +NE + K+Q +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++RL I D+ + + N L+ +L K+ ++ R + ++E + +H
Sbjct: 71 IIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H I+H DLK +N L+ M K+ DFG+A + + + + GT Y+PPE +
Sbjct: 127 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 251 QGICSIKS-----------DVFSFGMLLLEILSGK 274
S ++ DV+S G +L + GK
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKN-- 130
+S ++G GG V++ + K A+K +++ Q L +NE + K+Q +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++RL I D+ + + N L+ +L K+ ++ R + ++E + +H
Sbjct: 74 IIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H I+H DLK +N L+ M K+ DFG+A + + + + GT Y+PPE +
Sbjct: 130 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 251 QGICSIKS-----------DVFSFGMLLLEILSGK 274
S ++ DV+S G +L + GK
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 73 NNFS--DTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSR--QGLQELKNEALVIAKVQ 127
NNF + +LG G F V + + + G E A K L R R E+ +E V+ +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 128 H-KNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLL 186
++ L E +LI EY + F L ++ +++I+ I+EG+
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 187 YLHLHSRVRIIHRDLKASNILLDKEMKP----KISDFGMARIFKGNESKANTNRVAGTFG 242
YLH ++ I+H DLK NILL + P KI DFGM+R + GT
Sbjct: 146 YLHQNN---IVHLDLKPQNILLSS-IYPLGDIKIVDFGMSRKIG---HACELREIMGTPE 198
Query: 243 YIPPEYVYQGICSIKSDVFSFGMLLLEILS------GKKNTEFY 280
Y+ PE + + +D+++ G++ +L+ G+ N E Y
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 173 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 59
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 60 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 107
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 108 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 166
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 167 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 59
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 60 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 107
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 108 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 166
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 167 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 10 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 66
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 67 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 114
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 115 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 174 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKN-- 130
+S ++G GG V++ + K A+K +++ Q L +NE + K+Q +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++RL I D+ + + N L+ +L K+ ++ R + ++E + +H
Sbjct: 118 IIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H I+H DLK +N L+ M K+ DFG+A + + + + GT Y+PPE +
Sbjct: 174 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 251 QGICSIKS-----------DVFSFGMLLLEILSGK 274
S ++ DV+S G +L + GK
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 65
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 66 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 113
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 173 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 8 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 64
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 65 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 112
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 113 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 171
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 172 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 58
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 59 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 106
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 107 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 165
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 166 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 41/233 (17%)
Query: 64 SFSSVAAATNNFS------DTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQ 114
F SV + F+ + +G G G V Y VL + +A+K+LS R Q
Sbjct: 10 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQT 66
Query: 115 ELKN---EALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDA 163
K E +++ V HKN++ LL + P K+L+ F L DA
Sbjct: 67 HAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDA 114
Query: 164 TKRVLLELGTRLQIIEGIVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGM 221
++++ + + ++ +L HLHS IIHRDLK SNI++ + KI DFG+
Sbjct: 115 NLCQVIQMELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 173
Query: 222 ARIFKGNESKANTNRVAGTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
AR S T V + Y PE + D++S G ++ E++ K
Sbjct: 174 ART--AGTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKN-- 130
+S ++G GG V++ + K A+K +++ Q L +NE + K+Q +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++RL I D+ + + N L+ +L K+ ++ R + ++E + +H
Sbjct: 118 IIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H I+H DLK +N L+ M K+ DFG+A + + + + GT Y+PPE +
Sbjct: 174 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 251 QGICSIKS-----------DVFSFGMLLLEILSGK 274
S ++ DV+S G +L + GK
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKN-- 130
+S ++G GG V++ + K A+K +++ Q L +NE + K+Q +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++RL I D+ + + N L+ +L K+ ++ R + ++E + +H
Sbjct: 70 IIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H I+H DLK +N L+ M K+ DFG+A + + + + GT Y+PPE +
Sbjct: 126 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 251 QGICSIKS-----------DVFSFGMLLLEILSGK 274
S ++ DV+S G +L + GK
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y VL + +A+K+LS R Q K E +++ V H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 120
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P K+L+ F L DA ++++ + +
Sbjct: 121 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 168
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 169 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 225
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
+ Y PE + D++S G ++ E++ K
Sbjct: 226 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y VL + +A+K+LS R Q K E +++ V H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 120
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P K+L+ F L DA ++++ + +
Sbjct: 121 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 168
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 169 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 225
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
+ Y PE + D++S G ++ E++ K
Sbjct: 226 TRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHK-N 130
N + K+G G FG +Y G +A G+E+A+K V+++ +L E+ + +Q
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 66
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ + C E D +++ E L D F F + K L T L + + ++ + Y+H
Sbjct: 67 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK---FSLKTVLLLADQMISRIEYIHS 123
Query: 191 HSRVRIIHRDLKASNILLDKEMKPK---ISDFGMARIFK 226
+ IHRD+K N L+ K I DFG+A+ ++
Sbjct: 124 KN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHK-N 130
N + K+G G FG +Y G +A G+E+A+K V+++ +L E+ + +Q
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ + C E D +++ E L D F F + K L T L + + ++ + Y+H
Sbjct: 65 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK---FSLKTVLLLADQMISRIEYIHS 121
Query: 191 HSRVRIIHRDLKASNILLDKEMKPK---ISDFGMARIFK 226
+ IHRD+K N L+ K I DFG+A+ ++
Sbjct: 122 KN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 84
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 85 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 132
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR A T+ +
Sbjct: 133 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART-------AGTSFMM 184
Query: 239 GTF----GYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
F Y PE + D++S G ++ E++ G
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 54/248 (21%)
Query: 65 FSSVAAATNNFSDTNKLGEGGFGPVYKGV----LAKGDEIAVKRLSVRSRQGLQELKNEA 120
+ +V +N F +K+GEG F VY + ++IA+K L S + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 121 LVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKS----LDFFLFDATKRVLLELGTRLQ 176
L +A Q N++ + C + D ++ YL ++S L+ F + +L L L+
Sbjct: 73 LTVAGGQ-DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALK 131
Query: 177 IIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP-KISDFGMAR--------IFKG 227
I + I+HRD+K SN L ++ +K + DFG+A+ + K
Sbjct: 132 RIH-------------QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF 178
Query: 228 NESKANTNRV------------------AGTFGYIPPEYVYQGICSIKS---DVFSFGML 266
+S+A R AGT G+ PE + + C ++ D++S G++
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK--CPNQTTAIDMWSAGVI 236
Query: 267 LLEILSGK 274
L +LSG+
Sbjct: 237 FLSLLSGR 244
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 77 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 124
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 125 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 181
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
+ Y PE + D++S G ++ E++ K
Sbjct: 182 TRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDE--IAVKRLS---VRSRQGLQELKNEALVIAKVQHKNLVRLL 135
+G G FG V + V K + A+K LS + R E ++A +V+L
Sbjct: 83 IGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 136 GCCIERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
C + D+ L ++ EY+P L + + + E + E +V L +H +
Sbjct: 142 -CAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAE-VVLALDAIH---SM 193
Query: 195 RIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESK-ANTNRVAGTFGYIPPEYVY--- 250
+IHRD+K N+LLDK K++DFG K +E+ + + GT YI PE +
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 251 -QGICSIKSDVFSFGMLLLEILSGKKNTEFY 280
G + D +S G+ L E+L G +T FY
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVG--DTPFY 280
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSV---RSRQGL--QELKNEALVIAKVQHKNLVRL 134
+G+G F V + + G + AVK + V S GL ++LK EA + ++H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRV----LLELGTRLQIIEGIVEGLLYLHL 190
L +++E++ L F+ KR + + I+E L Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 191 HSRVRIIHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
++ IIHRD+K +LL + K+ FG+A I G RV GT ++ PE
Sbjct: 149 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRV-GTPHFMAPE 203
Query: 248 YVYQGICSIKSDVFSFGMLLLEILSG 273
V + DV+ G++L +LSG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 87
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 88 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 135
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+AR S T V
Sbjct: 136 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVV 192
Query: 239 GTFGYIPPEYVYQGICSIKSDVFSFGMLLLEILSGK 274
+ Y PE + D++S G ++ E++ K
Sbjct: 193 TRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSV---RSRQGL--QELKNEALVIAKVQHKNLVRL 134
+G+G F V + + G + AVK + V S GL ++LK EA + ++H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 135 LGCCIERDEKLLIYEYLPNKSLDFFLFD-ATKRVLLELGTRLQIIEGIVEGLLYLHLHSR 193
L +++E++ L F + A + + I+E L Y H ++
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 152
Query: 194 VRIIHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
IIHRD+K +LL + K+ FG+A I G RV GT ++ PE V
Sbjct: 153 --IIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRV-GTPHFMAPEVVK 208
Query: 251 QGICSIKSDVFSFGMLLLEILSG 273
+ DV+ G++L +LSG
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 51 RKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSR 110
R + ++LP+ S + + +G G FG + +E+ + R
Sbjct: 3 RPAVAGPMDLPIMHDS------DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE 56
Query: 111 QGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
+ + +K E + ++H N+VR + ++ EY L + +A + E
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSE 114
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP--KISDFGMARIFKGN 228
R + ++ G+ Y H +++ HRDLK N LLD P KI+DFG + K +
Sbjct: 115 DEARF-FFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYS---KAS 167
Query: 229 ESKANTNRVAGTFGYIPPEYV----YQGICSIKSDVFSFGMLLLEILSG 273
+ GT YI PE + Y G +DV+S G+ L +L G
Sbjct: 168 VLHSQPKSAVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 55/226 (24%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+A R A
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------RTA 176
Query: 239 GTFGYIPPEYV---YQGICSI-------KSDVFSFGMLLLEILSGK 274
GT + PE V Y+ I D++S G ++ E++ K
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 24/229 (10%)
Query: 51 RKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSR 110
R + ++LP+ S + + +G G FG + +E+ + R
Sbjct: 3 RPAVSGPMDLPIMHDS------DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 111 QGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
+ +K E + ++H N+VR + ++ EY L + +A + E
Sbjct: 57 KIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSE 114
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP--KISDFGMARIFKGN 228
R + ++ G+ Y H +++ HRDLK N LLD P KI DFG + K +
Sbjct: 115 DEARF-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYS---KSS 167
Query: 229 ESKANTNRVAGTFGYIPPEYV----YQGICSIKSDVFSFGMLLLEILSG 273
+ GT YI PE + Y G +DV+S G+ L +L G
Sbjct: 168 VLHSQPKSTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LG G G V +G +AVKR+ + L E+K L+ H N++R C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY-CSE 78
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-------IIEGIVEGLLYLHLHS 192
D L I L N +L + +K V E +LQ ++ I G+ HLHS
Sbjct: 79 TTDRFLYIALELCNLNLQDLV--ESKNVSDE-NLKLQKEYNPISLLRQIASGVA--HLHS 133
Query: 193 RVRIIHRDLKASNILLD-------------KEMKPKISDFGMARIFKGNES--KANTNRV 237
++IIHRDLK NIL+ + ++ ISDFG+ + +S + N N
Sbjct: 134 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 238 AGTFGYIPPEYVYQG-------ICSIKSDVFSFGMLLLEILSGKKN 276
+GT G+ PE + + + D+FS G + ILS K+
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHK-N 130
N + K+G G FG +Y G +A G+E+A+K V+++ +L E+ +Q
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKH--PQLHIESKFYKMMQGGVG 66
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
+ + C E D +++ E L D F F + K L T L + + ++ + Y+H
Sbjct: 67 IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK---FSLKTVLLLADQMISRIEYIHS 123
Query: 191 HSRVRIIHRDLKASNILLDKEMKPK---ISDFGMARIFK 226
+ IHRD+K N L+ K I DFG+A+ ++
Sbjct: 124 KN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRL------SVRSRQGLQELKNEALVIA 124
T F + K+G G FG V+K V G A+KR SV + L+E+ A++
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL-- 67
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL-----------DFFLFDATKRVLLELGT 173
QH ++VR E D L+ EY SL +F K +LL++G
Sbjct: 68 -GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG- 125
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
GL Y+H S ++H D+K SNI + + P A +G+E
Sbjct: 126 ---------RGLRYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDEDDWA 167
Query: 234 TNRVA---GTFGYI 244
+N+V G G++
Sbjct: 168 SNKVMFKIGDLGHV 181
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 81 LGEGGFGPVYKGVLAK-GDEIAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRLLGCC 138
LG+G V++G K GD A+K + + + + E V+ K+ HKN+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF--A 74
Query: 139 IERD----EKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRV 194
IE + K+LI E+ P SL L + + L L ++ +V G+ +L +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 195 RIIHRDLKASNILL----DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV- 249
I+HR++K NI+ D + K++DFG AR + +E + + GT Y+ P+
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPDMYE 188
Query: 250 -------YQGICSIKSDVFSFGMLLLEILSG 273
+Q D++S G+ +G
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIE 140
+G G FG + +E+ + R + + +K E + ++H N+VR +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 141 RDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRD 200
++ EY L + +A + E R + ++ G+ Y H +++ HRD
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGR--FSEDEARF-FFQQLISGVSYCHA---MQVCHRD 139
Query: 201 LKASNILLDKEMKP--KISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV----YQGIC 254
LK N LLD P KI DFG + K + + GT YI PE + Y G
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGYS---KSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKV 196
Query: 255 SIKSDVFSFGMLLLEILSG 273
+DV+S G+ L +L G
Sbjct: 197 ---ADVWSCGVTLYVMLVG 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 70 AATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQHK 129
A ++ F ++LG G VY+ KG + ++ + ++ E V+ ++ H
Sbjct: 50 ALSDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHP 108
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELG-----TRLQIIEGIVEG 184
N+++L E L+ E + L FD ++E G ++ I+E
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGEL----FDR----IVEKGYYSERDAADAVKQILEA 160
Query: 185 LLYLHLHSRVRIIHRDLKASNILL---DKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
+ YLH + I+HRDLK N+L + KI+DFG+++I E + V GT
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTP 214
Query: 242 GYIPPEYVYQGICSIKSDVFSFGMLLLEILSG 273
GY PE + + D++S G++ +L G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRL------SVRSRQGLQELKNEALVIA 124
T F + K+G G FG V+K V G A+KR SV + L+E+ A++
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL-- 65
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL-----------DFFLFDATKRVLLELGT 173
QH ++VR E D L+ EY SL +F K +LL++G
Sbjct: 66 -GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG- 123
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
GL Y+H S ++H D+K SNI + + P A +G+E
Sbjct: 124 ---------RGLRYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDEDDWA 165
Query: 234 TNRVA---GTFGYI 244
+N+V G G++
Sbjct: 166 SNKVMFKIGDLGHV 179
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 45/191 (23%)
Query: 75 FSDTNKLGEGGFGPV---YKGVLAKGDEIAVKRLSVRSRQGLQELKN---EALVIAKVQH 128
+ + +G G G V Y +L + +A+K+LS R Q K E +++ V H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 129 KNLVRLLGCCIERDEKLLIYEYLPNKSLDFF--------LFDATKRVLLELGTRLQIIEG 180
KN++ LL + P KSL+ F L DA ++++ + +
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY 130
Query: 181 IVEGLL--YLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVA 238
++ +L HLHS IIHRDLK SNI++ + KI DFG+A R A
Sbjct: 131 LLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------RTA 176
Query: 239 GTFGYIPPEYV 249
GT + PE V
Sbjct: 177 GTSFMMEPEVV 187
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LG G G V +G +AVKR+ + L E+K L+ H N++R C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY-CSE 96
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-------IIEGIVEGLLYLHLHS 192
D L I L N +L + +K V E +LQ ++ I G+ HLHS
Sbjct: 97 TTDRFLYIALELCNLNLQDLV--ESKNVSDE-NLKLQKEYNPISLLRQIASGVA--HLHS 151
Query: 193 RVRIIHRDLKASNILLD-------------KEMKPKISDFGMARIFKGNES--KANTNRV 237
++IIHRDLK NIL+ + ++ ISDFG+ + + + N N
Sbjct: 152 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 238 AGTFGYIPPEYVYQGI---CSIKSDVFSFGMLLLEILSGKKN 276
+GT G+ PE + + + D+FS G + ILS K+
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 75 FSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVR--SRQGLQELKNEALVIAKVQHKN-- 130
+S ++G GG V++ + K A+K +++ Q L +NE + K+Q +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 131 LVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHL 190
++RL I D+ + + N L+ +L K+ ++ R + ++E + +H
Sbjct: 118 IIRLYDYEI-TDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 191 HSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYVY 250
H I+H DLK +N L+ M K+ DFG+A + + + + G Y+PPE +
Sbjct: 174 HG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 251 QGICSIKS-----------DVFSFGMLLLEILSGK 274
S ++ DV+S G +L + GK
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRL------SVRSRQGLQELKNEALVIA 124
T F + K+G G FG V+K V G A+KR SV + L+E+ A++
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL-- 65
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL-----------DFFLFDATKRVLLELGT 173
QH ++VR E D L+ EY SL +F K +LL++G
Sbjct: 66 -GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG- 123
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
GL Y+H S ++H D+K SNI + + P A +G+E
Sbjct: 124 ---------RGLRYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDEDDWA 165
Query: 234 TNRVA---GTFGYI 244
+N+V G G++
Sbjct: 166 SNKVMFKIGDLGHV 179
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LG G G V +G +AVKR+ + L E+K L+ H N++R C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY-CSE 96
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-------IIEGIVEGLLYLHLHS 192
D L I L N +L + +K V E +LQ ++ I G+ HLHS
Sbjct: 97 TTDRFLYIALELCNLNLQDLV--ESKNVSDE-NLKLQKEYNPISLLRQIASGVA--HLHS 151
Query: 193 RVRIIHRDLKASNILLD-------------KEMKPKISDFGMARIFKGNES--KANTNRV 237
++IIHRDLK NIL+ + ++ ISDFG+ + + + N N
Sbjct: 152 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 238 AGTFGYIPPEYVYQGI---CSIKSDVFSFGMLLLEILSGKKN 276
+GT G+ PE + + + D+FS G + ILS K+
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRL------SVRSRQGLQELKNEALVIA 124
T F + K+G G FG V+K V G A+KR SV + L+E+ A++
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL-- 63
Query: 125 KVQHKNLVRLLGCCIERDEKLLIYEYLPNKSL-----------DFFLFDATKRVLLELGT 173
QH ++VR E D L+ EY SL +F K +LL++G
Sbjct: 64 -GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG- 121
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKAN 233
GL Y+H S ++H D+K SNI + + P A +G+E
Sbjct: 122 ---------RGLRYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDEDDWA 163
Query: 234 TNRVA---GTFGYI 244
+N+V G G++
Sbjct: 164 SNKVMFKIGDLGHV 177
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQ-HKNLVRLLGCC 138
L EGGF VY+ + G E A+KRL + + + E + K+ H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 139 -IERDE------KLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
I ++E + L+ L L FL R L T L+I + ++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH-R 154
Query: 192 SRVRIIHRDLKASNILLDKEMKPKISDFGMA 222
+ IIHRDLK N+LL + K+ DFG A
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 78 TNKLGEGGFGPVYKGVLAK-GDEIAVKRLS-VRSRQGLQELKNEALVIAKVQHKNLVRLL 135
++ LG+G V++G K GD A+K + + + + E V+ K+ HKN+V+L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 136 GCCIERD----EKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLH 191
IE + K+LI E+ P SL L + + L L ++ +V G+ +L +
Sbjct: 74 --AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 192 SRVRIIHRDLKASNILL----DKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
I+HR++K NI+ D + K++DFG AR + +E + GT Y+ P+
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV---XLYGTEEYLHPD 185
Query: 248 YV--------YQGICSIKSDVFSFGMLLLEILSG 273
+Q D++S G+ +G
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVRSR---------QGLQELKNEALVIAKVQHKNL 131
LGEG +G V K VL D + R +V+ G +K E ++ +++HKN+
Sbjct: 13 LGEGSYGKV-KEVL---DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 132 VRLLGCCI--ERDEKLLIYEYLPNKSLDFFLFDATKR--VLLELGTRLQIIEGIVEGLLY 187
++L+ E+ + ++ EY + KR V G Q+I+G L Y
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG----LEY 124
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
LH I+H+D+K N+LL KIS G+A + G+ + PPE
Sbjct: 125 LHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 248 YVYQGI---CSIKSDVFSFGMLLLEILSG 273
+ G+ K D++S G+ L I +G
Sbjct: 182 -IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
+HS + IHRD+K N+LLDK K++DFG + E + GT YI PE +
Sbjct: 189 IHS-MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 250 Y----QGICSIKSDVFSFGMLLLEILSGKKNTEFY 280
G + D +S G+ L E+L G +T FY
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY 279
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
+HS + IHRD+K N+LLDK K++DFG + E + GT YI PE +
Sbjct: 189 IHS-MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 250 Y----QGICSIKSDVFSFGMLLLEILSGKKNTEFY 280
G + D +S G+ L E+L G +T FY
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 190 LHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV 249
+HS + IHRD+K N+LLDK K++DFG + E + GT YI PE +
Sbjct: 184 IHS-MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 250 Y----QGICSIKSDVFSFGMLLLEILSGKKNTEFY 280
G + D +S G+ L E+L G +T FY
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY 274
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 100 IAVKRLSVRSRQGLQELKN------EALVIAKVQH--KNLVRLLGCCIERDEKLLIYEYL 151
+A+K + EL N E +++ KV ++RLL D +LI E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILER- 137
Query: 152 PNKSLDFFLFDATKRVLLELGTR---LQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILL 208
P D F F + L E R Q++E + H H+ ++HRD+K NIL+
Sbjct: 138 PEPVQDLFDFITERGALQEELARSFFWQVLEAV------RHCHN-CGVLHRDIKDENILI 190
Query: 209 D-KEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPEYV-YQGICSIKSDVFSFGML 266
D + K+ DFG + K GT Y PPE++ Y + V+S G+L
Sbjct: 191 DLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 246
Query: 267 LLEILSGKKNTEFYHTGYLSING--YDQTQVASKIK-LVESCLA-RP 309
L +++ G + F H + I G + + +V+S+ + L+ CLA RP
Sbjct: 247 LYDMVCG--DIPFEHDEEI-IRGQVFFRQRVSSECQHLIRWCLALRP 290
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 40/226 (17%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRLSVR-SRQGLQELKNEALVIAKVQHKNLVRLLGCCI 139
LG G G V +G +AVKR+ + L E+K L+ H N++R C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIK---LLTESDDHPNVIRYY-CSE 78
Query: 140 ERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQ-------IIEGIVEGLLYLHLHS 192
D L I L N +L + +K V E +LQ ++ I G+ HLHS
Sbjct: 79 TTDRFLYIALELCNLNLQDLV--ESKNVSDE-NLKLQKEYNPISLLRQIASGVA--HLHS 133
Query: 193 RVRIIHRDLKASNILLD-------------KEMKPKISDFGMARIFKGNES--KANTNRV 237
++IIHRDLK NIL+ + ++ ISDFG+ + + + N N
Sbjct: 134 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 238 AGTFGYIPPEYVYQG-------ICSIKSDVFSFGMLLLEILSGKKN 276
+GT G+ PE + + + D+FS G + ILS K+
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ--GLQELKNEALVIAKVQH 128
+++F + LGEG +G V G+ +A+K++ + L+ L+ E ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 129 KNLVRLLGCCIER-------DEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGI 181
+N++ + I+R +E +I E + D + + ++ + I I
Sbjct: 69 ENIITIFN--IQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQYFI 118
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG-- 239
+ L + + +IHRDLK SN+L++ K+ DFG+ARI +ES A+ + G
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQ 176
Query: 240 --------TFGYIPPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
T Y PE + S DV+S G +L E+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ--GLQELKNEALVIAKVQH 128
+++F + LGEG +G V G+ +A+K++ + L+ L+ E ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 129 KNLVRLLGCCIER-------DEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGI 181
+N++ + I+R +E +I E + D + + ++ + I I
Sbjct: 69 ENIITIFN--IQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQYFI 118
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG-- 239
+ L + + +IHRDLK SN+L++ K+ DFG+ARI +ES A+ + G
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQ 176
Query: 240 --------TFGYIPPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
T Y PE + S DV+S G +L E+
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGVL-AKGDEIAVKRLSVRSRQ--GLQELKNEALVIAKVQH 128
+++F + LGEG +G V G+ +A+K++ + L+ L+ E ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 129 KNLVRLLGCCIER-------DEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGI 181
+N++ + I+R +E +I E + D + + ++ + I I
Sbjct: 69 ENIITIFN--IQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQYFI 118
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAG-- 239
+ L + + +IHRDLK SN+L++ K+ DFG+ARI +ES A+ + G
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQ 176
Query: 240 --------TFGYIPPEYVYQGI-CSIKSDVFSFGMLLLEIL 271
T Y PE + S DV+S G +L E+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 49 NRRKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFG--PVYKGVLAKGDEIAVKRLS 106
+R T +++P+ S + + +G G FG + + L K + +AVK +
Sbjct: 2 DRAPVTTGPLDMPIMHDS------DRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIE 54
Query: 107 VRSRQGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKR 166
R + ++ E + ++H N+VR + +I EY L + +A +
Sbjct: 55 -RGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR- 112
Query: 167 VLLELGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP--KISDFGMARI 224
E R + ++ G+ Y H ++I HRDLK N LLD P KI DFG +
Sbjct: 113 -FSEDEARF-FFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYS-- 165
Query: 225 FKGNESKANTNRVAGTFGYIPPEYVYQGICSIK-SDVFSFGMLLLEILSG 273
K + + GT YI PE + + K +DV+S G+ L +L G
Sbjct: 166 -KSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 24/229 (10%)
Query: 51 RKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSR 110
R + ++LP+ S + + +G G FG + +E+ + R
Sbjct: 3 RPAVSGPMDLPIMHDS------DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 111 QGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
+ + +K E + ++H N+VR + ++ EY L + +A + E
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSE 114
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP--KISDFGMARIFKGN 228
R + ++ G+ Y H +++ HRDLK N LLD P KI FG + K +
Sbjct: 115 DEARF-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYS---KSS 167
Query: 229 ESKANTNRVAGTFGYIPPEYV----YQGICSIKSDVFSFGMLLLEILSG 273
+ GT YI PE + Y G +DV+S G+ L +L G
Sbjct: 168 VLHSQPKSTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 73 NNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVRSR--QGLQELKNEALVIAKVQHK 129
N F K+G G FG +Y G + +E+A+K +V+++ Q L E K ++
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLH 189
N VR G +E D +L+ + L D F F + K L L T L + + ++ + ++H
Sbjct: 67 N-VRWFG--VEGDYNVLVMDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVH 120
Query: 190 LHSRVRIIHRDLKASNILLD---KEMKPKISDFGMARIFKGNES------KANTNRVAGT 240
S +HRD+K N L+ + + I DFG+A+ ++ + + N N + GT
Sbjct: 121 SKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKN-LTGT 176
Query: 241 FGYIPPEYVYQGI-CSIKSDVFSFGMLLLEILSG 273
Y + GI S + D+ S G +L+ L G
Sbjct: 177 ARYASVN-THLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 24/229 (10%)
Query: 51 RKSTKREVELPLFSFSSVAAATNNFSDTNKLGEGGFGPVYKGVLAKGDEIAVKRLSVRSR 110
R + ++LP+ S + + +G G FG + +E+ + R
Sbjct: 3 RPAVSGPMDLPIMHDS------DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE 56
Query: 111 QGLQELKNEALVIAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLE 170
+ + +K E + ++H N+VR + ++ EY L + +A + E
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSE 114
Query: 171 LGTRLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKP--KISDFGMARIFKGN 228
R + ++ G+ Y H +++ HRDLK N LLD P KI FG + K +
Sbjct: 115 DEARF-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYS---KSS 167
Query: 229 ESKANTNRVAGTFGYIPPEYV----YQGICSIKSDVFSFGMLLLEILSG 273
+ GT YI PE + Y G +DV+S G+ L +L G
Sbjct: 168 VLHSQPKDTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 25/227 (11%)
Query: 64 SFSSVAAATNNFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLS------VRSRQGLQEL 116
SF + + +G G +G V G ++A+K++ +++ L+EL
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 104
Query: 117 KNEALVIAKVQHKNLVRL---LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
K ++ +H N++ + L + E +Y L D + + L
Sbjct: 105 K----ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 160
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR--IFKGNESK 231
R + + ++ GL Y+H ++IHRDLK SN+L+++ + KI DFGMAR E +
Sbjct: 161 RYFLYQ-LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
Query: 232 ANTNRVAGTFGYIPPEYV---YQGICSIKSDVFSFGMLLLEILSGKK 275
T Y PE + ++ +I D++S G + E+L+ ++
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQAI--DLWSVGCIFGEMLARRQ 261
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRL--SVRSRQGLQELKN---------EALVIAKVQHK 129
+ G +G V GV ++G +A+KR+ +V + + L + E ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSL--DFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
N++ L + +E + YL + + D +R+++ + I+ GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
LH ++HRDL NILL I DF +AR + + AN Y PE
Sbjct: 150 LH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 248 YVYQ--GICSIKSDVFSFGMLLLEILSGK---KNTEFY 280
V Q G + D++S G ++ E+ + K + + FY
Sbjct: 204 LVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 81 LGEGGFGPVYKGVLAKGDEIAVKRL--SVRSRQGLQELKN---------EALVIAKVQHK 129
+ G +G V GV ++G +A+KR+ +V + + L + E ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 130 NLVRLLGCCIERDEKLLIYEYLPNKSL--DFFLFDATKRVLLELGTRLQIIEGIVEGLLY 187
N++ L + +E + YL + + D +R+++ + I+ GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 188 LHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTFGYIPPE 247
LH ++HRDL NILL I DF +AR + + AN Y PE
Sbjct: 150 LH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 248 YVYQ--GICSIKSDVFSFGMLLLEILSGK---KNTEFY 280
V Q G + D++S G ++ E+ + K + + FY
Sbjct: 204 LVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 25/227 (11%)
Query: 64 SFSSVAAATNNFSDTNKLGEGGFGPVYKGVLA-KGDEIAVKRLS------VRSRQGLQEL 116
SF + + +G G +G V G ++A+K++ +++ L+EL
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 105
Query: 117 KNEALVIAKVQHKNLVRL---LGCCIERDEKLLIYEYLPNKSLDFFLFDATKRVLLELGT 173
K ++ +H N++ + L + E +Y L D + + L
Sbjct: 106 K----ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 161
Query: 174 RLQIIEGIVEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMAR--IFKGNESK 231
R + + ++ GL Y+H ++IHRDLK SN+L+++ + KI DFGMAR E +
Sbjct: 162 RYFLYQ-LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
Query: 232 ANTNRVAGTFGYIPPEYV---YQGICSIKSDVFSFGMLLLEILSGKK 275
T Y PE + ++ +I D++S G + E+L+ ++
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQAI--DLWSVGCIFGEMLARRQ 262
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 19/186 (10%)
Query: 72 TNNFSDTNKLGEGGFGPVYKGV-LAKGDEIAVKRLSVR--------SRQGLQELKNEALV 122
+ +S + LG G FG V+ V K E+ VK + L ++ E +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 123 IAKVQHKNLVRLLGCCIERDEKLLIYEYLPNKSLDFFLF-DATKRVLLELGTRLQIIEGI 181
+++V+H N++++L + L+ E LD F F D R+ L + I +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASY--IFRQL 139
Query: 182 VEGLLYLHLHSRVRIIHRDLKASNILLDKEMKPKISDFGMARIFKGNESKANTNRVAGTF 241
V + YL L IIHRD+K NI++ ++ K+ DFG A E GT
Sbjct: 140 VSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTI 193
Query: 242 GYIPPE 247
Y PE
Sbjct: 194 EYCAPE 199
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 81 LGEGGFGPVYKGV-LAKGDEIAVKRLSVRSRQGLQELKNEALVIAKVQ-HKNLVRLLGCC 138
LGEG + V V L G E AVK + ++ + E + + Q +KN++ L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF- 79
Query: 139 IERDEKL-LIYEYLPNKSLDFFLFDATKRVLLELGTRLQIIEGIVEGLLYLHLHSRVRII 197
E D + L++E L S+ L K+ +++ + L +LH I
Sbjct: 80 FEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IA 133
Query: 198 HRDLKASNILLDKEMK--P-KISDFGMARIFKGNES-----KANTNRVAGTFGYIPPEYV 249
HRDLK NIL + K P KI DF + K N S G+ Y+ PE V
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 250 ---------YQGICSIKSDVFSFGMLLLEILSG 273
Y C D++S G++L +LSG
Sbjct: 194 EVFTDQATFYDKRC----DLWSLGVVLYIMLSG 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,080,515
Number of Sequences: 62578
Number of extensions: 370556
Number of successful extensions: 3508
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 1234
Number of HSP's gapped (non-prelim): 1124
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)