BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037688
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 18/110 (16%)
Query: 10 EDMVVPQLPY----------IIKFCKAHGVSKEN--------EFGKGKSNDELKEMLLVA 51
+D VV ++P ++++CK H V +E+ EF K + ++LL A
Sbjct: 35 DDCVVTEVPLQNVTGKILSIVVEYCKKHVVDEESDEFKTWDEEFMKKFDQPTVFQLLLAA 94
Query: 52 NYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
NYLNIK +LD +T+A+RIK+K+ E IR+ F I+ +F PEEE A RKE+
Sbjct: 95 NYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKEN 144
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 17 LPYIIKFCKAHGVSKENEFGKGKSN--DE---------LKEMLLVANYLNIKEMLDYLTK 65
L +I++CK H V + N + N DE + E++L ANYLNIK +LD +
Sbjct: 52 LVKVIEYCKKHHVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQ 111
Query: 66 TLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
T+A+ IK K+ E IR F I+ +F PEEEEA RKE+
Sbjct: 112 TVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKEN 147
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 26/122 (21%)
Query: 2 SSMSDDTSEDMVVPQ-------LPYIIKFCKAHGVSKENEFGKGKSNDELK--------- 45
+ MS+D D +P L +I++C H V N S+++LK
Sbjct: 30 AHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAANPC----SDEDLKKWDKEFMEK 85
Query: 46 ------EMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRK 99
++++ ANYLNIK +LD +T+A+ IK+ +VE+ RKFF I+ ++ EEEEA R+
Sbjct: 86 YQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRR 145
Query: 100 ES 101
E+
Sbjct: 146 EN 147
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 13/84 (15%)
Query: 18 PYIIKFCKAHGVSKENEFGKGKSNDELKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVE 77
PY FCK + L E++L ANYL+IK +LD KT+AN I+ K+ E
Sbjct: 83 PYDRDFCKVDQPT-------------LFELILAANYLDIKPLLDVTCKTVANMIRGKTPE 129
Query: 78 YIRKFFGIQTNFMPEEEEATRKES 101
IRK F I+ +F PEEEE RKE+
Sbjct: 130 EIRKIFNIKNDFTPEEEEQIRKEN 153
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 17 LPYIIKFCKAHGVSKENEFGKGKSN--DE---------LKEMLLVANYLNIKEMLDYLTK 65
L +I++CK + V + N + N DE + E++L ANYLNIK + D +
Sbjct: 52 LVKVIEYCKKYHVDEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQ 111
Query: 66 TLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
T+A+ IK K+ E IR F I+ +F PEEEEA RKE+
Sbjct: 112 TVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKEN 147
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 13/84 (15%)
Query: 18 PYIIKFCKAHGVSKENEFGKGKSNDELKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVE 77
PY FCK + L E++L ANYL+IK +LD KT+AN I+ K+ E
Sbjct: 83 PYDRDFCKVDQPT-------------LFELILAANYLDIKPLLDVTCKTVANMIRGKTPE 129
Query: 78 YIRKFFGIQTNFMPEEEEATRKES 101
IRK F I+ +F PEEEE RKE+
Sbjct: 130 EIRKIFNIKNDFTPEEEEQIRKEN 153
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 102 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 159
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 102 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 159
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 102 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 159
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 96 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 153
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 96 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 153
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 96 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 153
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 97 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 154
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 98 LFEIILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 155
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 98 LFEIILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 155
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 99 LFEIILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 156
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 97 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 154
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 97 LFEIILAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 154
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK KS E IRK F IQ +F PEEE+ R+E+
Sbjct: 98 LFEIILAANYLDIKPLLDIGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRREN 155
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 19/106 (17%)
Query: 15 PQLPYIIKFCKAH----GVSKENEFGKGKSNDELKE---------------MLLVANYLN 55
P L ++++C+ H + E+E K + E+ E ++L ANY++
Sbjct: 60 PVLRKVVEWCEHHRKDPPQTTEDENDSRKKSTEIDEWDQKFMQVDQEMLFEIILAANYMD 119
Query: 56 IKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
IK +LD KT+AN IK KS E IRK F I +F PEEEE R+E+
Sbjct: 120 IKPLLDVGCKTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRREN 165
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 1 HSSMSDDTSEDMVVPQ-----LPYIIKFCKAHGVSKENEFGKGKSNDELK---------- 45
H S +D T + +P L +I++C H V N S+D+LK
Sbjct: 32 HMSENDCTDNGIPLPNVTGKILAMVIEYCNKHHVDAANPC----SDDDLKKWDKEFMEKD 87
Query: 46 -----EMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKE 100
+++ ANYLNIK + D +T+A IK + E IR+FF I+ + PEEE A R+E
Sbjct: 88 TSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRE 147
Query: 101 S 101
+
Sbjct: 148 N 148
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 20/105 (19%)
Query: 17 LPYIIKFCKAH------GVSKENEFGKGKSND--------------ELKEMLLVANYLNI 56
L ++++C+ H G +E++ KS D L E++L +NYL+I
Sbjct: 51 LRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDI 110
Query: 57 KEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
K +LD KT+AN I+ KS E IRK F I +F PEEEE RKE+
Sbjct: 111 KPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKEN 155
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYL+IK +LD KT+AN IK K+ E IRK F I+ +F EEE RKE+
Sbjct: 100 LFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKEN 157
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 46 EMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
+++L ANYLN++ + D +KT+A+ IK+ + E +R+ F I+ +F PEEEEA R E+
Sbjct: 130 DIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNEN 185
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
L E++L ANYLNIK +LD K +A I+ +S E IR+ F I +F PEEE A R+E+
Sbjct: 131 LYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRREN 188
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 19/94 (20%)
Query: 17 LPYIIKFCKAH---GVSKENEF-GKGKSNDELK---------------EMLLVANYLNIK 57
L +I++CK H SK G S+D+LK E++L ANYLNIK
Sbjct: 52 LAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIK 111
Query: 58 EMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMP 91
+LD +T+A+ IK K+ E IR F I+ +F P
Sbjct: 112 NLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTP 145
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 33/133 (24%)
Query: 2 SSMSDDTSEDMVVPQ-------LPYIIKFCKAHGV------------SKEN--------- 33
+ M DD D +P L +I++CK H + + EN
Sbjct: 30 AHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNEL 89
Query: 34 -----EFGKGKSNDELKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTN 88
EF K + + +++L NYLN++++L +T+A+ +K+ S E +R+ F I+ +
Sbjct: 90 RTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIEND 149
Query: 89 FMPEEEEATRKES 101
+ PEEE+A RKE+
Sbjct: 150 YTPEEEDAIRKEN 162
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 22/106 (20%)
Query: 17 LPYIIKFCKAHGVSKENEFGKGKS------NDELK---------------EMLLVANYLN 55
L +I++CK H V E G K NDELK +++L ANYLN
Sbjct: 54 LAKVIEYCKKH-VEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLN 112
Query: 56 IKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
I +LD K +A++++ K+ E +R F I+ ++ PEEE R E+
Sbjct: 113 IGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNEN 158
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 14/98 (14%)
Query: 17 LPYIIKFCKAHGVSK-------------ENEFGKG-KSNDELKEMLLVANYLNIKEMLDY 62
L +I++CK H VS + EF K + + L +++L ANYLNIK++LD
Sbjct: 51 LSKVIEYCKKHVVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDL 110
Query: 63 LTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKE 100
+T+A+ I K + IR GI+ +F PEEEE RKE
Sbjct: 111 GCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKE 148
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 17 LPYIIKFCKAHGVSKENEFGKGKS------NDELK---------------EMLLVANYLN 55
L +I++CK H V E G K N ELK ++L ANYLN
Sbjct: 54 LAKVIEYCKKH-VEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLN 112
Query: 56 IKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
I +LD K +A++++ K+ +R+ F I+ ++ PEEE R E+
Sbjct: 113 ISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNEN 158
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 17 LPYIIKFCKAHG---------VSKENEFGKGKSNDELKEMLLVANYLNIKEMLDYLTKTL 67
L II++CK H V+ + EF K D L ++L A+YL + + + + + +
Sbjct: 52 LAIIIEYCKKHVDDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAI 111
Query: 68 ANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
A+ +K+V IR+ F I+ ++ PEEEE RK++
Sbjct: 112 ADYTADKTVNEIRELFNIENDYTPEEEEELRKKN 145
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 44 LKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMP 91
L +++L ANYLNIK +LD +T+A+ IK K+ E IRK F I+ +F P
Sbjct: 109 LFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 156
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 47 MLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
++L ANYLN + +L + ++T+A+ IK+K+ E +R+ F I+ +F PEEEE RKE+
Sbjct: 98 IILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKEN 152
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 17 LPYIIKFCKAHGVSKENEFGKGKSNDELKE---------------MLLVANYLNIKEMLD 61
L +I++C H V N S+D+L++ + AN+LN K +L
Sbjct: 52 LEMVIEYCNKHHVDAANPC----SDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLH 107
Query: 62 YLTKTLANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
+T+A+ IK + + +R+FF I+ + PEEE A R+E+
Sbjct: 108 LAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRREN 147
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 17 LPYIIKFCKAHGVSKENEFGKGKSNDELK--------EMLLVANYLNIKEMLDYLTKTL- 67
L +I +C+ H SKE E K D +K ++++ ANYLNI+ +LD KT+
Sbjct: 51 LKIVIDYCEKHVKSKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVS 110
Query: 68 ----ANRIKNKSVEYIRKFFGIQTNFMPEEEEATRKES 101
A+ + K+ + IR F I+ + EE R+E+
Sbjct: 111 DLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREEN 148
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 34 EFGKGKSNDELKEMLLVANYLNIKEMLDYLTKTLANRIKNKSVEYIRKFFGIQTNFM-PE 92
EF K + + +++L ANYLN++ +L +T+A+ IK+K+ E +R+ F I+ +F E
Sbjct: 94 EFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEE 153
Query: 93 EEEATRKES 101
EEEA RKE+
Sbjct: 154 EEEAIRKEN 162
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 3 SMSDDTSEDMVVPQ-------LPYIIKFCKAHGV-SKEN-------EFGKGKSNDELKEM 47
M++D D +P L +I++CK H V SKE EF K L ++
Sbjct: 5 GMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESKEEDLKKWDAEFMKKMEQSILFDV 64
Query: 48 LLVANYLNIKEMLD 61
++ ANYLNI+ +LD
Sbjct: 65 MMAANYLNIQSLLD 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,539,054
Number of Sequences: 539616
Number of extensions: 1363775
Number of successful extensions: 3273
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3215
Number of HSP's gapped (non-prelim): 71
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)