Query 037690
Match_columns 192
No_of_seqs 127 out of 794
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 05:10:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037690.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037690hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xhn_A CREG, cellular represso 100.0 1.8E-39 6.2E-44 256.4 16.5 168 12-181 12-183 (184)
2 3dnh_A Uncharacterized protein 100.0 4.2E-39 1.4E-43 267.0 13.5 168 8-190 17-188 (258)
3 3gas_A Heme oxygenase; FMN-bin 100.0 2.7E-34 9.2E-39 238.0 15.2 160 18-190 86-251 (259)
4 2arz_A Hypothetical protein PA 100.0 6E-34 2.1E-38 233.8 17.2 162 13-189 2-164 (247)
5 3swj_A CHUZ, putative uncharac 100.0 7.7E-34 2.6E-38 234.5 16.3 158 16-186 84-247 (251)
6 3tgv_A Heme-binding protein HU 100.0 2.3E-32 7.9E-37 208.9 11.9 136 20-167 4-140 (148)
7 1vl7_A Hypothetical protein AL 100.0 3.2E-29 1.1E-33 192.6 11.6 139 18-167 18-157 (157)
8 2hq7_A Protein, related to gen 99.8 3.5E-20 1.2E-24 139.3 10.9 130 17-168 5-136 (146)
9 2iab_A Hypothetical protein; N 99.8 2.1E-19 7.3E-24 137.6 13.5 137 15-177 9-146 (155)
10 2asf_A Hypothetical protein RV 99.8 2.8E-18 9.7E-23 128.2 16.4 122 19-164 10-132 (137)
11 2i02_A General stress protein 99.8 1.8E-18 6.1E-23 130.6 15.3 128 17-165 9-138 (148)
12 3ec6_A General stress protein 99.8 1.9E-18 6.5E-23 129.4 14.7 125 18-166 3-130 (139)
13 3db0_A LIN2891 protein; putati 99.8 1.1E-18 3.6E-23 128.8 11.9 123 18-163 5-127 (128)
14 2re7_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 126.7 13.3 126 18-164 6-133 (134)
15 2fhq_A Putative general stress 99.8 9.3E-18 3.2E-22 125.3 13.8 123 18-164 8-132 (141)
16 1rfe_A Hypothetical protein RV 99.8 1.6E-17 5.4E-22 126.9 13.4 128 20-164 12-146 (162)
17 3f7e_A Pyridoxamine 5'-phospha 99.7 2.4E-17 8.1E-22 122.2 13.1 120 21-160 6-127 (131)
18 3u5w_A Putative uncharacterize 99.7 3.5E-17 1.2E-21 124.4 13.9 120 20-160 12-143 (148)
19 2hhz_A Pyridoxamine 5'-phospha 99.7 2E-16 6.8E-21 119.8 15.2 125 20-166 4-131 (150)
20 2ig6_A NIMC/NIMA family protei 99.7 5E-16 1.7E-20 118.3 15.1 125 18-167 18-144 (150)
21 3dmb_A Putative general stress 99.7 4.3E-16 1.5E-20 118.1 14.2 131 14-167 3-136 (147)
22 3fkh_A Putative pyridoxamine 5 99.7 1.9E-16 6.6E-21 119.3 11.1 116 19-160 10-125 (138)
23 2aq6_A Pyridoxine 5'-phosphate 99.7 1.5E-15 5.1E-20 113.9 13.9 127 19-163 6-143 (147)
24 2qea_A Putative general stress 99.7 3.1E-15 1E-19 114.9 15.5 124 19-166 5-131 (160)
25 2fg9_A 5-nitroimidazole antibi 99.7 7.3E-16 2.5E-20 120.4 12.0 133 20-161 28-167 (178)
26 2hq9_A MLL6688 protein; struct 99.6 2.8E-15 9.7E-20 113.3 13.5 122 20-160 9-143 (149)
27 2hti_A BH0577 protein; structu 99.6 4.7E-15 1.6E-19 116.2 15.2 130 20-161 15-161 (185)
28 3cp3_A Uncharacterized protein 99.6 2.6E-15 8.9E-20 113.6 12.4 118 19-161 16-136 (148)
29 3u35_A General stress protein; 99.6 3E-15 1E-19 117.7 12.7 128 17-167 25-155 (182)
30 2htd_A Predicted flavin-nucleo 99.6 3.9E-14 1.3E-18 106.5 15.4 111 20-160 29-139 (140)
31 2fur_A Hypothetical protein; s 99.6 2.1E-14 7.1E-19 114.9 11.0 143 9-161 10-162 (209)
32 2q9k_A Uncharacterized protein 99.6 8.1E-14 2.8E-18 106.3 13.5 109 20-167 11-121 (151)
33 2vpa_A NIMA-related protein; c 99.5 7.1E-15 2.4E-19 118.4 7.5 142 10-162 36-194 (216)
34 3ba3_A Protein LP_0091, pyrido 99.4 1.8E-12 6.1E-17 98.3 11.8 130 20-166 4-136 (145)
35 2ol5_A PAI 2 protein; structur 99.4 7.1E-12 2.4E-16 99.8 13.0 132 20-160 12-161 (202)
36 1dnl_A Pyridoxine 5'-phosphate 99.4 5.6E-12 1.9E-16 100.2 12.2 121 24-165 25-175 (199)
37 1ci0_A Protein (PNP oxidase); 99.3 5.8E-11 2E-15 96.2 16.4 123 26-166 51-203 (228)
38 1nrg_A Pyridoxine 5'-phosphate 99.3 1.2E-10 4.2E-15 96.1 14.0 121 26-167 74-224 (261)
39 1ty9_A Phenazine biosynthesis 99.2 1.4E-10 4.9E-15 93.6 14.0 120 24-166 50-199 (222)
40 2i51_A Uncharacterized conserv 99.2 4.5E-10 1.5E-14 88.8 16.0 140 11-167 2-173 (195)
41 2ou5_A Pyridoxamine 5'-phospha 99.2 7.3E-11 2.5E-15 91.9 9.4 119 30-167 29-157 (175)
42 2a2j_A Pyridoxamine 5'-phospha 99.1 5.7E-10 1.9E-14 91.3 12.5 121 27-166 77-225 (246)
43 3in6_A FMN-binding protein; st 98.8 1E-07 3.5E-12 72.0 13.8 126 17-162 16-143 (148)
44 3a6r_A FMN-binding protein; el 98.7 1.9E-07 6.4E-12 68.5 10.7 115 21-161 4-120 (122)
45 3r5l_A Deazaflavin-dependent n 98.3 7E-06 2.4E-10 60.1 9.8 101 29-155 14-121 (122)
46 3r5z_A Putative uncharacterize 97.7 0.00013 4.5E-09 54.8 7.9 100 31-156 38-144 (145)
47 3h96_A F420-H2 dependent reduc 97.6 0.00051 1.8E-08 51.4 9.5 103 29-156 29-142 (143)
48 3r5y_A Putative uncharacterize 97.6 0.0004 1.4E-08 52.3 8.6 100 31-156 40-146 (147)
49 2ptf_A Uncharacterized protein 80.6 2.8 9.5E-05 33.3 5.5 55 32-93 37-92 (233)
50 3e4v_A NADH:FMN oxidoreductase 73.1 4.7 0.00016 30.5 4.7 70 21-94 9-79 (186)
51 2iml_A Hypothetical protein; F 71.4 6.7 0.00023 30.3 5.3 54 32-92 16-71 (199)
52 2nr4_A Conserved hypothetical 65.8 8.5 0.00029 30.0 4.9 53 32-92 31-83 (213)
53 3bpk_A Nitrilotriacetate monoo 64.0 15 0.00052 28.0 6.0 73 18-94 13-93 (206)
54 1eje_A FMN-binding protein; st 56.6 6.1 0.00021 29.9 2.5 69 22-93 19-87 (192)
55 3b5m_A Uncharacterized protein 53.7 18 0.00061 27.9 4.7 56 33-92 7-66 (205)
56 3fge_A Putative flavin reducta 52.5 17 0.00059 27.7 4.5 69 22-94 16-92 (203)
57 1yoa_A Putative flavoprotein; 49.7 17 0.00058 26.4 3.9 68 23-94 6-75 (159)
58 4hx6_A Oxidoreductase; structu 45.7 29 0.001 26.0 4.8 71 20-94 20-91 (185)
59 3rh7_A Hypothetical oxidoreduc 44.0 81 0.0028 25.9 7.6 72 20-94 18-91 (321)
60 1rz1_A Phenol 2-hydroxylase co 43.2 28 0.00095 25.3 4.2 68 23-94 6-75 (161)
61 3pft_A Flavin reductase; desul 42.3 46 0.0016 24.1 5.3 69 22-94 6-76 (157)
62 2ecu_A Flavin reductase (HPAC) 40.4 60 0.0021 23.2 5.6 69 22-94 4-74 (149)
63 3hmz_A Flavin reductase domain 38.1 9 0.00031 29.3 0.8 68 21-93 20-88 (199)
64 2d5m_A Flavoredoxin; flavoprot 37.3 16 0.00055 27.4 2.1 59 32-94 16-75 (190)
65 1i0r_A Conserved hypothetical 36.3 38 0.0013 24.9 4.0 59 32-94 13-71 (169)
66 2r0x_A Possible flavin reducta 35.9 74 0.0025 22.9 5.5 70 21-94 6-77 (158)
67 3bnk_A Flavoredoxin; protein-F 32.0 36 0.0012 25.6 3.3 59 32-94 18-76 (196)
68 2r6v_A Uncharacterized protein 31.7 27 0.00092 26.3 2.5 59 32-94 31-89 (191)
69 1usc_A Putative styrene monoox 31.2 34 0.0012 25.3 3.0 59 32-94 21-79 (178)
70 3cb0_A 4-hydroxyphenylacetate 27.9 41 0.0014 24.7 2.9 69 21-93 17-87 (173)
71 2d9r_A Conserved hypothetical 27.2 1.1E+02 0.0039 20.8 4.9 58 23-90 45-102 (104)
72 2d37_A Hypothetical NADH-depen 25.5 86 0.0029 23.2 4.4 68 20-91 22-91 (176)
73 3k86_A Chlorophenol-4-monooxyg 23.6 59 0.002 24.4 3.1 70 20-93 19-90 (185)
74 3j21_V 50S ribosomal protein L 20.1 27 0.00094 22.1 0.5 32 48-84 17-48 (66)
75 3pgv_A Haloacid dehalogenase-l 20.0 48 0.0016 25.8 2.0 43 2-52 28-70 (285)
No 1
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=100.00 E-value=1.8e-39 Score=256.41 Aligned_cols=168 Identities=39% Similarity=0.749 Sum_probs=147.0
Q ss_pred CCCCchHHHHHHHHHHhhCCEEEEEeecCCC--CCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEE
Q 037690 12 KKPHPNDAAAFARWLVSQNYWGVLNTISSDL--GGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAI 89 (192)
Q Consensus 12 ~~p~~~~~a~~ar~Ll~~~~~~~LAT~~~~~--~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v 89 (192)
-+|+..+.++++|+||+++++++|||++++. +|+||+|+|+|++||+.+.+|.+||+++..++|++||++||||||+|
T Consensus 12 ~~~~~~~~~~~ar~ll~~~~~g~LaTi~~~~~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~v 91 (184)
T 1xhn_A 12 SLPPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTM 91 (184)
T ss_dssp CCCCTTCHHHHHHHHHHHCSEEEEEEECCCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEE
T ss_pred CCCCChHHHHHHHHHHHhCCEEEEEecccCCCCCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEEE
Confidence 3677888999999999999999999998621 49999999999966543677999999999999999999999999999
Q ss_pred eeCCCCCCCC--CCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 90 SEYPLGTCGE--RDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 90 ~~~~~~~~~~--~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
.+++..+|++ .+|..+.++||+++|+++++++ +|.++++++|+++||+++.|.+.++|.||||+|+++++++|||+
T Consensus 92 ~~~~~~~~~~~~~dp~~~~~~rvtl~G~a~~v~d--~e~~~~~~~~~~~hP~~~~~~~~~~~~~~~l~i~~i~~v~gFG~ 169 (184)
T 1xhn_A 92 TLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNE--TEMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYFGG 169 (184)
T ss_dssp EGGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCG--GGHHHHHHHHHHHCGGGGGSCGGGCCEEEEEEEEEEEEECSSSS
T ss_pred ecCCCccccccCCCCccccCceEEEEEEEEECCh--HHHHHHHHHHHHHCcChhHcccCCCEEEEEEEEeEEEEEccCCc
Confidence 9876433322 3555445899999999999985 36789999999999999999999999999999999999999999
Q ss_pred CcccChhhhcCCCc
Q 037690 168 RKPLTVDQYLHTKM 181 (192)
Q Consensus 168 a~~i~~~~~~~a~~ 181 (192)
++||+++||.+|++
T Consensus 170 ~~~v~~~~~~~a~~ 183 (184)
T 1xhn_A 170 PKIVTPEEYYNVTV 183 (184)
T ss_dssp CEECCHHHHHHCC-
T ss_pred eEEeCHHHHhhccC
Confidence 99999999999876
No 2
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.2e-39 Score=266.99 Aligned_cols=168 Identities=17% Similarity=0.250 Sum_probs=142.9
Q ss_pred ccCCCCCCchHHHHHHHHHHhhCCEEEEEeec-CCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeE
Q 037690 8 STISKKPHPNDAAAFARWLVSQNYWGVLNTIS-SDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSS 86 (192)
Q Consensus 8 ~~~~~~p~~~~~a~~ar~Ll~~~~~~~LAT~~-~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vS 86 (192)
-++..+|+..++++.+|+||+++++|+|||++ . +|+||+|+|+|+ .+.+|.+||++|.++.|++||++||+||
T Consensus 17 ~~~~~~p~~~~~~~~ar~lL~~~~~g~LaTv~~~--dG~P~~s~v~y~----~d~~g~~~~~~s~~~~h~~NL~~dprvS 90 (258)
T 3dnh_A 17 KIEPSAGAPFEAVRVARDVLHTSRTAALATLDPV--SGYPYTTATNIG----IEPDGTPFFFAAGLTLHARNMETDARIS 90 (258)
T ss_dssp ---------CCHHHHHHHHHHHCCEEEEEEECTT--TCCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCCEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCEEEEEeccCC--CCceEEEEEEEE----ECCCCCEEEEEeCCcHHHHHHhhCCCEE
Confidence 45677889999999999999999999999999 6 699999999999 7888999999999999999999999999
Q ss_pred EEEeeCCCCCCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEeccCC
Q 037690 87 LAISEYPLGTCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWFG 166 (192)
Q Consensus 87 l~v~~~~~~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~GFG 166 (192)
|+|.+.+ ..+|+ .++|||++|++++++++ |.++++++|+++||+++.|.+.+||.||||+|++++||+|||
T Consensus 91 l~V~~~~-----~~d~~--~~~rvtl~G~a~~v~~~--e~~~l~~~y~~rhP~a~~~~~~~df~l~rl~~~~v~~v~GFG 161 (258)
T 3dnh_A 91 VTLAPFG-----KGDAL--TLPRLTLVGRADRIGPD--EVPLAIARYIARYPKAKLYLSLPDTRLYRLRTEGVQINGGPA 161 (258)
T ss_dssp EEECCGG-----GSCGG--GSCEEEEEEEEEECCGG--GHHHHHHHHHHHCTTHHHHTSSTTEEEEEEEEEEEEEEC---
T ss_pred EEEecCC-----CCChh--hCCeEEEEEEEEEcCch--HHHHHHHHHHHHCcChHHcccCCCeEEEEEEEeEEEEEcccC
Confidence 9999875 24665 78999999999999863 678999999999999999999999999999999999999999
Q ss_pred C-CcccChhhhcC--CCcccccccccc
Q 037690 167 G-RKPLTVDQYLH--TKMNKFAFILSK 190 (192)
Q Consensus 167 ~-a~~i~~~~~~~--a~~d~~~~~~~~ 190 (192)
+ ++||+++||.. +.+||+++.++.
T Consensus 162 ~~a~~v~~~d~~~~~a~~d~l~~~~~~ 188 (258)
T 3dnh_A 162 RNASNITPADLRTDLSGAEELMAAAES 188 (258)
T ss_dssp ---CCCCHHHHSCCCTTCHHHHHHHHH
T ss_pred cccccCCHHHhcccCCCCchhHHHHHH
Confidence 9 99999999999 889999987653
No 3
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=100.00 E-value=2.7e-34 Score=238.00 Aligned_cols=160 Identities=11% Similarity=0.105 Sum_probs=141.2
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCC-CeEEEEeeCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDK-RSSLAISEYPLGT 96 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np-~vSl~v~~~~~~~ 96 (192)
+..+++++|++++++++|||+++ +|+|++|+++|+ .+ +|.+||++|.+++|++||++|| +|||+|.+++..
T Consensus 86 ~l~~ei~~ll~~~~~~~LAT~~~--~G~P~~S~v~f~----~~-~g~~~iliS~lA~Ht~NL~~np~rvSllviede~~- 157 (259)
T 3gas_A 86 GVEEEVKAFKEGFDSVCLATLHP--NGHVVCSYAPLM----SD-GKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESK- 157 (259)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEEEE----EE-TTEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTT-
T ss_pred hHHHHHHHHHHhCCEEEEEeeCc--CCCEEEEEEEEE----EE-CCEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccc-
Confidence 45678999999999999999997 699999999999 55 4789999999999999999999 999999888752
Q ss_pred CCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCC---CcCCCCCCCeEEEEEEEeEEEEeccCCCCcccCh
Q 037690 97 CGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPE---MMDWPEDHNFQIFKLEIEDIFLINWFGGRKPLTV 173 (192)
Q Consensus 97 ~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~---~~~~~~~~df~~~~l~~~~~~~v~GFG~a~~i~~ 173 (192)
..+++ +.+|+|+.|++++|++ +++++.+++.|++|||. ++.|.+++||.||||+|++++||+|||+++||+.
T Consensus 158 --~~~~~--a~~Rlt~~g~A~~v~~-~~~~~~~~~~~~~r~p~~~~~~~~~~~~DF~l~rl~p~~~r~v~GFG~a~~l~~ 232 (259)
T 3gas_A 158 --AKSAI--LRKRLRYKTNTRFIER-GAEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILG 232 (259)
T ss_dssp --SSBTT--BCCEEEEEEEEEEECS-SHHHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEETTEEEEEET
T ss_pred --cCChh--hcCeEEEEEEEEECCC-chHHHHHHHHHHHHcCCchhhHhcccCCCeEEEEEEEeEEEEEccccEEEEeCH
Confidence 34666 8899999999999988 46889999999999998 7889999999999999999999999999999999
Q ss_pred hhhcCC--Ccccccccccc
Q 037690 174 DQYLHT--KMNKFAFILSK 190 (192)
Q Consensus 174 ~~~~~a--~~d~~~~~~~~ 190 (192)
++|... +-||+...-+|
T Consensus 233 ~~l~~~~~~~~~~~~~~~~ 251 (259)
T 3gas_A 233 DKIAYVGDKGNPHNFAHKK 251 (259)
T ss_dssp TEEEESCTTCCCGGGCC--
T ss_pred HHHHHhhcCCCcchhhhhh
Confidence 999875 45666554443
No 4
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=100.00 E-value=6e-34 Score=233.81 Aligned_cols=162 Identities=26% Similarity=0.357 Sum_probs=143.9
Q ss_pred CCCchHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeC
Q 037690 13 KPHPNDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEY 92 (192)
Q Consensus 13 ~p~~~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~ 92 (192)
+|+..+.++++|+||+++++++|||++++.+|+|++|+|+|+ .+.+|.+||++++.++|++||++||+|||+|.+.
T Consensus 2 ~~~~~~~~~~~r~ll~~~~~~~LaT~~~~~dG~P~~s~v~~~----~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~ 77 (247)
T 2arz_A 2 NSMSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYC----LDAEGRPLILISRIAQHTHNLQADPRCSMLVGER 77 (247)
T ss_dssp ---CHHHHHHHHHHHHHCSEEEEEEECSSSTTCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECT
T ss_pred CCCChHHHHHHHHHHHhCCEEEEEEcCCCCCCcceEEEEEEE----ECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecC
Confidence 567788899999999999999999998622399999999999 7888999999999999999999999999999765
Q ss_pred CCCCCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEeccCCCCcccC
Q 037690 93 PLGTCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWFGGRKPLT 172 (192)
Q Consensus 93 ~~~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~GFG~a~~i~ 172 (192)
. ..+|+ .+.+|++.|+++.+++ ++.+.+.++|.++||+++.|...++|.+|||+|++++|++|||+++||+
T Consensus 78 ~-----~~~~~--~~~~v~l~G~a~~v~d--~e~~~~~~~~~~~~P~~~~~~~~~~~~l~rl~~~~~~~~~gfG~~~~v~ 148 (247)
T 2arz_A 78 G-----AEDIQ--AVGRLTLLAEARQLAE--EEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLA 148 (247)
T ss_dssp T-----CSSTT--SSCEEEEEEEEEECCH--HHHHHHHHHHHHHCGGGTTCBTTBBEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred C-----CCChh--hCceEEEEEEEEECCc--HHHHHHHHHHHHHCcChhhcccccCcEEEEEEEEEEEEEcCCCceEEeC
Confidence 4 23565 6889999999999984 4578999999999999988999999999999999999999999999999
Q ss_pred hhhhcCCCcccccc-ccc
Q 037690 173 VDQYLHTKMNKFAF-ILS 189 (192)
Q Consensus 173 ~~~~~~a~~d~~~~-~~~ 189 (192)
+++|..+ ||++. .++
T Consensus 149 ~~~~~~a--dp~~~~~~~ 164 (247)
T 2arz_A 149 AERVPLA--NPFAGEAER 164 (247)
T ss_dssp TTTSCCC--CTTTTHHHH
T ss_pred hhhhccc--hhhhhhhHH
Confidence 9999999 99988 543
No 5
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=100.00 E-value=7.7e-34 Score=234.48 Aligned_cols=158 Identities=11% Similarity=0.063 Sum_probs=140.4
Q ss_pred chHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCC-CeEEEEeeCCC
Q 037690 16 PNDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDK-RSSLAISEYPL 94 (192)
Q Consensus 16 ~~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np-~vSl~v~~~~~ 94 (192)
..+..+++++||+++++++|||+++ +|+|++|+|+|+ .+ +|.+||++|.+++|++||++|| ||||+|.+++.
T Consensus 84 ~~~l~~e~~~ll~~~~~~~LAT~~~--dG~P~~s~v~~~----~~-~g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e~ 156 (251)
T 3swj_A 84 FSGVEKELNEFMLSFNSVALATLNA--NGEVVCSYAPFV----ST-QWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDES 156 (251)
T ss_dssp CSHHHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEEEE----EE-TTEEEEEEETTSHHHHHHHHSTTCEEEEEECCTT
T ss_pred hhhHHHHHHHHHhhCCEEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEEeCchHHHHHHHhCCCeEEEEEEcCcc
Confidence 4567899999999999999999998 699999999999 55 7899999999999999999999 99999998764
Q ss_pred CCCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCC---cCCCCCCCeEEEEEEEeEEEEeccCCCCccc
Q 037690 95 GTCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEM---MDWPEDHNFQIFKLEIEDIFLINWFGGRKPL 171 (192)
Q Consensus 95 ~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~---~~~~~~~df~~~~l~~~~~~~v~GFG~a~~i 171 (192)
. ..+++ +.+|+|+.|+++.|++ +++.+.+++.|.+|||.+ +.|.+++||.||||+|++++||+|||+++||
T Consensus 157 ~---~~~~~--~~~rltl~G~a~~v~~-~~e~~~~~~~~~~k~p~a~~~~~~~~~~Df~l~rl~p~~~r~v~GFG~a~~l 230 (251)
T 3swj_A 157 K---AASVI--LRKRLRYRVNASFLER-GERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYDI 230 (251)
T ss_dssp T---SSCTT--CCCEEEEEEEEEECCS-SHHHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEETTEEEEE
T ss_pred c---ccCcc--ccceEEEEEEEEEecC-hhHHHHHHHHHHHHCCCchhhhhcCcccCEEEEEEEeeEEEEECCcceeEEe
Confidence 1 34665 7899999999999987 468889999999999985 6778889999999999999999999999999
Q ss_pred ChhhhcCCC--cccccc
Q 037690 172 TVDQYLHTK--MNKFAF 186 (192)
Q Consensus 172 ~~~~~~~a~--~d~~~~ 186 (192)
++++|.++. -||+.+
T Consensus 231 ~~~~l~~~~~~~~~~~~ 247 (251)
T 3swj_A 231 ENGNVTHVGASGNPHKF 247 (251)
T ss_dssp SSSCCEESCTTCCCCCC
T ss_pred CHHHHHHhhcCCCCCcC
Confidence 999999875 345443
No 6
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.98 E-value=2.3e-32 Score=208.90 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=122.1
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
..++++||+++++++|||+++ +|+|++|+|+|+ .+ +|.+||++|..++|++||++||||||+|.+++.. .
T Consensus 4 ~~ei~~fl~~~~~~~LaT~~~--~G~P~~s~v~~~----~~-~~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~---~ 73 (148)
T 3tgv_A 4 EPEIKEFRQERKTLQLATVDA--QGRPNVSYAPFV----QN-QEGYFVLISHIARHARNLEVNPQVSIMMIEDETE---A 73 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEECT--TCCEEEEEEEEE----EE-TTEEEEEEETTSHHHHHHHHSCEEEEEEECCGGG---C
T ss_pred hHHHHHHHhhCCEEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEECCccHHHHHHHhCCCeEEEEecCccc---c
Confidence 467899999999999999998 699999999999 55 5789999999999999999999999999988652 2
Q ss_pred CCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCC-CcCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 100 RDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPE-MMDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 100 ~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~-~~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
.+++ +..|+|+.|+++.+++++++.+++.++|..+||. ++.|..++||.||||+|++++||+|||-
T Consensus 74 ~~~~--~~~rltl~G~a~~v~~~~~~~~~~~~~~~~~~~~~a~~~~~~~DF~~~rl~p~~~r~V~GFG~ 140 (148)
T 3tgv_A 74 KQLF--ARKRLTFDAVASMVERDSELWCQVIAQMGERFGEIIDGLSQLQDFMLFRLQPEQGLFVKGFGL 140 (148)
T ss_dssp SCGG--GCCEEEEEEEEEEECTTSHHHHHHHHHHHHHHCTHHHHHTTCTTEEEEEEEECSCCEEESCGG
T ss_pred cCcc--cceEEEEeeeEEEcCCCcHHHHHHHHHHHhhcchhhhHhhccCCEEEEEEEeEEEEEECcccc
Confidence 4554 7899999999999998778888999999999855 7889999999999999999999999994
No 7
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.96 E-value=3.2e-29 Score=192.59 Aligned_cols=139 Identities=15% Similarity=0.189 Sum_probs=119.2
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
...+++++||+++++++|||+++ +|.|++++|.|+ .+.+|.+||+++..++|++||++||+|||++.+.+.
T Consensus 18 ~~~~~~~~ll~~~~~~~LaTv~~--dG~P~~~~v~~~----~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~--- 88 (157)
T 1vl7_A 18 KAQAEYAGFIQEFQSAIISTISE--QGIPNGSYAPFV----IDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEA--- 88 (157)
T ss_dssp -----CHHHHTTCSEEEEEEECT--TSCEEEEEEEEE----ECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGG---
T ss_pred hHHHHHHHHHHhCCEEEEEEECC--CCCEEEEEEEEE----EcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcCcc---
Confidence 45778999999999999999998 599999999999 676689999999999999999999999999998763
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCC-cCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 98 GERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEM-MDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~-~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
...+++ ...+|++.|+++.+++++++++.++++|.++||+. +.|.+.++|.+|+|+|++++|++|||+
T Consensus 89 ~~~~~~--~~~~v~i~G~a~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~l~~~~~~~~~GFG~ 157 (157)
T 1vl7_A 89 KTNQIF--ARRRLSFDCTATLIERESQKWNQVVDQFQERFGQIIEVLRGLADFRIFQLTPKEGRFVIGFGA 157 (157)
T ss_dssp GCSSGG--GCCEEEEEEEEEEECTTSHHHHHHHHHHHHHHTHHHHHHHHHSCCEEEEEEEEEEEEECSSCC
T ss_pred ccCCcc--cCceEEEEEEEEEcCCCcHHHHHHHHHHHHHCchHHHHhhccCCEEEEEEEEeEEEEEcCcCC
Confidence 113443 56899999999999886567889999999999984 667777899999999999999999995
No 8
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.83 E-value=3.5e-20 Score=139.28 Aligned_cols=130 Identities=12% Similarity=0.023 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCC-CCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCC
Q 037690 17 NDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNE-GSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLG 95 (192)
Q Consensus 17 ~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~-~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~ 95 (192)
.+..++++++|+++++++|||+++ +|.|++++|.|. .+ ++|.+||++++.++|++||++||+|||++.+..
T Consensus 5 ~~~~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~-- 76 (146)
T 2hq7_A 5 EKFLIESNELVESSKIVMVGTNGE--NGYPNIKAMMRL----KHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDN-- 76 (146)
T ss_dssp SHHHHHHHHHHHHCSEEEEEEECG--GGCEEEEEEEEE----EEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSS--
T ss_pred HHHHHHHHHHHhcCCEEEEEEECC--CCCEEEEEEEEE----EEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCC--
Confidence 456788999999999999999987 599999999998 33 358899999999999999999999999998753
Q ss_pred CCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCCcCCCCCCCeEEEEEEEeEEEEeccCCCC
Q 037690 96 TCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEMMDWPEDHNFQIFKLEIEDIFLINWFGGR 168 (192)
Q Consensus 96 ~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~~~~~~~~df~~~~l~~~~~~~v~GFG~a 168 (192)
....|++.|+++.+++ .++..++.+.+.+++ |.. ...+++.+++|+|+++.+.+|||++
T Consensus 77 ----------~~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~p~~~~~w~~~~~~ 136 (146)
T 2hq7_A 77 ----------KFAGLMLVGTIEILHD-RASKEMLWTDGCEIYYPLG---IDDPDYTALCFTAEWGNYYRHLKNI 136 (146)
T ss_dssp ----------SSEEEEEEEEEEEECC-HHHHHHHCCTTHHHHCTTG---GGCTTEEEEEEEEEEEEEEETTEEE
T ss_pred ----------CceEEEEEEEEEEEcC-HHHHHHHHHHHHHHHCCCC---CCCCCEEEEEEEccEEEEEeCCCCe
Confidence 2378999999999976 344444444455444 442 2357899999999999999999986
No 9
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.82 E-value=2.1e-19 Score=137.56 Aligned_cols=137 Identities=12% Similarity=0.082 Sum_probs=108.8
Q ss_pred CchHHHHHHHHHHhhCCEEEEEeecCCCC-CCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCC
Q 037690 15 HPNDAAAFARWLVSQNYWGVLNTISSDLG-GAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 15 ~~~~~a~~ar~Ll~~~~~~~LAT~~~~~~-G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
+..+..+++++||+++++|+|||++. + |.|++++|.|+ .+ +|.+||+++..+.|++||++||+|||++.+..
T Consensus 9 ~~~~~~~~~~~~L~~~~~~~LaT~~~--d~G~P~~~pv~~~----~d-~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~~ 81 (155)
T 2iab_A 9 TAKQRIQDTLNRLELDVDAWVSTAGA--DGGAPYLVPLSYL----WD-GETFLVATPAASPTGRNLSETGRVRLGIGPTR 81 (155)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEEEECT--TSSCEEEEEEECE----EC-SSCEEEEEETTSHHHHHHHHHCEEEEEESSTT
T ss_pred ChHHhHHHHHHHHhCCCeEEEEEecC--CCCCceEEEEEEE----EE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCC
Confidence 34556788999999999999999987 6 99999999998 55 67899999999999999999999999997542
Q ss_pred CCCCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEeccCCCCcccCh
Q 037690 94 LGTCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWFGGRKPLTV 173 (192)
Q Consensus 94 ~~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~GFG~a~~i~~ 173 (192)
..+++.|+++.+++ .++.+++.+.|.++|+. ......+++.+|+|+|+++..-+ +..++..
T Consensus 82 --------------~~v~v~G~a~~v~d-~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~ri~p~~v~~w~---~~~~l~~ 142 (155)
T 2iab_A 82 --------------DLVLVEGTALPLEP-AGLPDGVGDTFAEKTGF-DPRRLTTSYLYFRISPRRVQAWR---EANELSG 142 (155)
T ss_dssp --------------CEEEEEEEEEEECG-GGCCTTHHHHHHHHHSC-CGGGCSSCEEEEEEEEEEEEEES---SGGGSTT
T ss_pred --------------CEEEEEEEEEEecC-chhHHHHHHHHHHHhCC-CccccCCCEEEEEEEEEEEEEec---CCCCcCc
Confidence 46889999999975 34456677788888861 11112368999999999988544 4566655
Q ss_pred hhhc
Q 037690 174 DQYL 177 (192)
Q Consensus 174 ~~~~ 177 (192)
..+.
T Consensus 143 r~~~ 146 (155)
T 2iab_A 143 RELM 146 (155)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 4443
No 10
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.80 E-value=2.8e-18 Score=128.20 Aligned_cols=122 Identities=16% Similarity=0.098 Sum_probs=104.1
Q ss_pred HHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCC-CCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 19 AAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEG-SGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 19 ~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~-~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
..++++++|+++++++|||++. +|.|++++|.|+ .++ +|.+||+++..+.|++||.+||+|||++.+..
T Consensus 10 ~~~~~~~~L~~~~~~~LaT~~~--dG~P~~~pv~~~----~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~---- 79 (137)
T 2asf_A 10 LSDDALAFLSERHLAMLTTLRA--DNSPHVVAVGFT----FDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGA---- 79 (137)
T ss_dssp -CHHHHHHTTSSCCEEEEEECT--TSCEEEEEECCE----EETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEETT----
T ss_pred CcHHHHHHHhCCCeEEEEEECC--CCCEEEEEEEEE----EECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECCC----
Confidence 3577999999999999999987 599999999998 555 48999999999999999999999999987531
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEecc
Q 037690 98 GERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINW 164 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~G 164 (192)
..+++.|+++.+++ .++.+++.+.|.++||.. ...+++.+++|+|++++--.+
T Consensus 80 ----------~~v~v~G~a~~~~d-~~~~~~~~~~~~~~~~~~---~~~~~~~viri~~~~v~g~~~ 132 (137)
T 2asf_A 80 ----------RWLSLEGRAAVNSD-IDAVRDAELRYAQRYRTP---RPNPRRVVIEVQIERVLGSAD 132 (137)
T ss_dssp ----------EEEEEEEEEEEECC-HHHHHHHHHHHHHHSCCC---CCCTTEEEEEEEEEEEEECTT
T ss_pred ----------CEEEEEEEEEEecC-HHHHHHHHHHHHHhcCcc---cCCCCEEEEEEEEEEEEEecc
Confidence 57899999999975 567788899999999752 246889999999999985543
No 11
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.80 E-value=1.8e-18 Score=130.58 Aligned_cols=128 Identities=11% Similarity=0.150 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEecc-ccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCC
Q 037690 17 NDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSF-SDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLG 95 (192)
Q Consensus 17 ~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y-~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~ 95 (192)
.+..++++++|+++++++|||+++ +|.|++++|.| .. .+.+|.+||+++..++|++||++||+|||++.+...
T Consensus 9 ~~~~~~~~~~l~~~~~~~LaT~~~--dG~P~~~pv~~~~~---~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~- 82 (148)
T 2i02_A 9 TQEIQKLHELIKNIDYGMFTTVDD--DGSLHSYPMSKSGD---INSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQ- 82 (148)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECT--TSCEEEEEEECBCC------CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTT-
T ss_pred HHHHHHHHHHHhcCCEEEEEEEcC--CCCEEEEEeEeeEE---EcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCCC-
Confidence 456788999999999999999997 59999999999 40 344788999999999999999999999999987642
Q ss_pred CCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCCcCCCCCCCeEEEEEEEeEEEEeccC
Q 037690 96 TCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEMMDWPEDHNFQIFKLEIEDIFLINWF 165 (192)
Q Consensus 96 ~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~~~~~~~~df~~~~l~~~~~~~v~GF 165 (192)
...+++.|+++.+++ .++.+++.+.+.+++ |.. ...+++.+++|+|+++.+.++-
T Consensus 83 -----------~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~i~~~~~~~~~~~ 138 (148)
T 2i02_A 83 -----------QRYVSISGTSQLVKD-RNKMRELWKPELQTWFPKG---LDEPDIALLKVNINQVNYWDST 138 (148)
T ss_dssp -----------TEEEEEEEEEEEECC-HHHHHHHCCGGGGGTCTTG---GGCTTEEEEEEEEEEEEEEEGG
T ss_pred -----------CeEEEEEEEEEEEcC-HHHHHHHHhHHHHHHccCC---CCCCCEEEEEEEeCEEEEEcCC
Confidence 267999999999975 444444444444433 332 2347899999999999999864
No 12
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.80 E-value=1.9e-18 Score=129.44 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=98.3
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
+..++++++|+++++++|||++ +|.|++++|.|+ . .+|.+||+++..++|++||++||+|||++....
T Consensus 3 ~l~~~~~~~L~~~~~~~LaT~~---dg~P~~~pv~~~----~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~---- 70 (139)
T 3ec6_A 3 HLKEKITTIIQGQRTGVLSTVR---NDKPHSAFMMFF----H-EDFVLYVATDRQSKKITDIENNPNVHVLLGREG---- 70 (139)
T ss_dssp CHHHHHHHHHHSCCEEEEEEEE---TTEEEEEEEECE----E-ETTEEEEEEETTCHHHHHHHHCCEEEEEECC------
T ss_pred hHHHHHHHHHhcCCEEEEEEec---CCCEEEEEEEEE----E-eCCEEEEEECCCCHHHHHHHhCCcEEEEEEecC----
Confidence 4678899999999999999998 499999999999 4 578999999999999999999999999985431
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCC---CCCeEEEEEEEeEEEEeccCC
Q 037690 98 GERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPE---DHNFQIFKLEIEDIFLINWFG 166 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~---~~df~~~~l~~~~~~~v~GFG 166 (192)
++. ....+++.|+++.+++ .++.+++.+ |.++.|.+ .+++.++||+|+++.+.++.|
T Consensus 71 ---d~~--~~~~v~v~G~a~~~~d-~~~~~~~~~------~~~~~~~~~~~~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 71 ---KKL--DEDYIEVEGLASIEED-STLKNKFWN------NSLKRWLLRPEDPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp ----CT--TCCEEEEEEEEEEECC-HHHHHHHCC------GGGGGTCSSTTCTTEEEEEEEEEEEEEEC---
T ss_pred ---CCC--CccEEEEEEEEEEEcC-HHHHHHHHH------HHHHHHhCCCCCCCEEEEEEEeeEEEEEcCCC
Confidence 111 2357999999999975 334333322 44555554 578999999999999999988
No 13
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.79 E-value=1.1e-18 Score=128.77 Aligned_cols=123 Identities=16% Similarity=0.158 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
+..++++++|+++++++|||++ +|.|++++|.|+ . .+|.+||+++..++|++||++||+|||+|.....
T Consensus 5 ~~~~~~~~~l~~~~~~~LaT~~---~g~P~~~pv~~~----~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~--- 73 (128)
T 3db0_A 5 ELEDKILAILEQHQVGVLTSVQ---GDFPHARYMTFL----H-DGLTLYTPSGKELPKTEEVRRNPHVCVLIGYDSP--- 73 (128)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEE---TTEEEEEEEECE----E-ETTEEEEEC----CTTCCCCCCCEEEEEECCCST---
T ss_pred HHHHHHHHHHhhCCEEEEEEec---CCCEEEEEEEEE----e-cCCEEEEEECCCCHHHHHHHhCCceEEEEEEcCC---
Confidence 3678899999999999999996 499999999999 4 5689999999999999999999999999965321
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEec
Q 037690 98 GERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLIN 163 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~ 163 (192)
....+++.|+++.+++ .++.+++.+.+.+++.. -...+++.++||+|+++.|++
T Consensus 74 --------~~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~---~~~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 74 --------GSAFLEINGLASLEED-ESIKERIWENISKDWFQ---GEDSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp --------TCCEEEEEEEEEECCC-HHHHHHHHHHHCSSCCC---------CCEEEEEEEEEEEEC
T ss_pred --------CCcEEEEEEEEEEEcC-HHHHHHHHHHHHHHhCC---CCCCCCEEEEEEEeEEEEEec
Confidence 2368999999999976 45556665555444422 112378999999999999985
No 14
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.78 E-value=3.6e-18 Score=126.71 Aligned_cols=126 Identities=11% Similarity=0.073 Sum_probs=101.0
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCC-CCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEG-SGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGT 96 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~-~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~ 96 (192)
+..++++++|+.+++++|||+++ +|.|++++|.|.. .+. +|.+||+++..+.|++||++||+|||++.+...
T Consensus 6 ~~~~~~~~~l~~~~~~~LaT~~~--dG~P~~~pv~~~~---~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~-- 78 (134)
T 2re7_A 6 KHIDKIQAVIKDVKFAMISTSNK--KGDIHAWPMTTSE---VNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDE-- 78 (134)
T ss_dssp CCHHHHHHHHHHCSCEEEEEECT--TSCEEEEEECCSE---EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS--
T ss_pred HHHHHHHHHHhcCCEEEEEEEcC--CCCEEEEecEeee---ecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCC--
Confidence 34788999999999999999997 5999999999971 222 788999999999999999999999999987542
Q ss_pred CCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHh-CCCCcCCCCCCCeEEEEEEEeEEEEecc
Q 037690 97 CGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTK-HPEMMDWPEDHNFQIFKLEIEDIFLINW 164 (192)
Q Consensus 97 ~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~r-hP~~~~~~~~~df~~~~l~~~~~~~v~G 164 (192)
...+++.|+++.+++ .++.+++.+.+.++ +|.. ...+++.+++|+|+++.+.+|
T Consensus 79 ----------~~~v~v~G~a~~~~d-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~w~~ 133 (134)
T 2re7_A 79 ----------KNYVSISGDAELPTD-KAKLDELWSPVYSAFFANG---KEDANIQLIKVVPHGVECWLS 133 (134)
T ss_dssp ----------SCEEEEEEEEECCCC-HHHHHHHCCHHHHHTSTTG---GGCTTEEEEEEEEEEEEEECC
T ss_pred ----------CeEEEEEEEEEEECC-HHHHHHHhhHHHHHHccCC---CCCCCEEEEEEEeCEEEEecC
Confidence 246899999999976 44545554444444 4542 235789999999999999875
No 15
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.77 E-value=9.3e-18 Score=125.26 Aligned_cols=123 Identities=16% Similarity=0.133 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCC-CCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPN-EGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGT 96 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~-~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~ 96 (192)
+..++++++|+++++++|||+++ +|.|++++|.|+ . ++++.+||+++..+.|++||.+||+|+|++.+..
T Consensus 8 ~~~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~--- 78 (141)
T 2fhq_A 8 TMKEKAVELLQKCEVVTLASVNK--EGYPRPVPMSKI----AAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG--- 78 (141)
T ss_dssp CHHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEECC----EEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT---
T ss_pred HHHHHHHHHHhcCCEEEEEEECC--CCCEEEEeeEEE----EeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC---
Confidence 35688999999999999999997 599999999998 4 3348999999999999999999999999998753
Q ss_pred CCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHh-CCCCcCCCCCCCeEEEEEEEeEEEEecc
Q 037690 97 CGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTK-HPEMMDWPEDHNFQIFKLEIEDIFLINW 164 (192)
Q Consensus 97 ~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~r-hP~~~~~~~~~df~~~~l~~~~~~~v~G 164 (192)
..+++.|+++.+++ .++.+++.+.+..+ +|.. ...+++.+++|+|+++.+.+|
T Consensus 79 -----------~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 79 -----------DSVALMGEVEVVTD-EKLKQELWQDWFIEHFPGG---PTDPGYVLLKFTANHATYWIE 132 (141)
T ss_dssp -----------EEEEEEEEEEEECC-HHHHHHSCCGGGGGTCTTC---TTCTTEEEEEEEEEEEEEEET
T ss_pred -----------CEEEEEEEEEEECC-HHHHHHHHHHHHHHHcCCC---CCCCCEEEEEEEcCEEEEeeC
Confidence 38999999999975 34555554444444 3542 345789999999999999997
No 16
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.75 E-value=1.6e-17 Score=126.88 Aligned_cols=128 Identities=13% Similarity=0.092 Sum_probs=105.3
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
.++++++|+++++++|||++. +|.|++++|+|+ .+ +|.+||+++..+.|++||.+||+|+|++.+...
T Consensus 12 ~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~-~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~----- 79 (162)
T 1rfe_A 12 EAEIADFVNSSRTGTLATIGP--DGQPHLTAMWYA----VI-DGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDT----- 79 (162)
T ss_dssp HHHHHHHHHHCCCEEEEEECT--TSCEEEEEECCE----EE-TTEEEEEEETTSHHHHHHHHCCEEEEEEEECSS-----
T ss_pred HHHHHHHHhcCcEEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEecCccHHHHHHhhCCeEEEEEEcCCC-----
Confidence 578999999999999999987 599999999998 44 689999999999999999999999999986542
Q ss_pred CCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCC--cCC---C--CCCCeEEEEEEEeEEEEecc
Q 037690 100 RDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEM--MDW---P--EDHNFQIFKLEIEDIFLINW 164 (192)
Q Consensus 100 ~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~--~~~---~--~~~df~~~~l~~~~~~~v~G 164 (192)
. + ...+|++.|+++.+++ +++..++.+.+.++|+.. ..| . ..+++.+++|+|+++...+.
T Consensus 80 ~--~--~~~~v~~~G~a~~v~d-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~ 146 (162)
T 1rfe_A 80 Y--D--TLRGVSFEGVAEIVEE-PEALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWDH 146 (162)
T ss_dssp G--G--GCEEEEEEEEEEEECC-HHHHHHHHHHHHHHHTCCCCGGGHHHHHHHTTTEEEEEEEEEEEEEEEG
T ss_pred c--c--cccEEEEEEEEEEeCC-hHHHHHHHHHHHHHhcCcccchhHHHHHhccCceEEEEEEEEEEEEecc
Confidence 1 1 3478999999999976 456677778888887541 111 1 14789999999999999873
No 17
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.75 E-value=2.4e-17 Score=122.16 Aligned_cols=120 Identities=16% Similarity=0.136 Sum_probs=98.3
Q ss_pred HHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCCC
Q 037690 21 AFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGER 100 (192)
Q Consensus 21 ~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~~ 100 (192)
++++++|+.+++++|||+++ +|.|++++|.|+ .+ +|.+||+++..+.|++||++||+|||++.+...
T Consensus 6 ~~~~~~l~~~~~~~LaT~~~--dG~P~~~pv~~~----~d-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~------ 72 (131)
T 3f7e_A 6 EGYESLLERPLYGHLATVRP--DGTPQVNAMWFA----WD-GEVLRFTHTTKRQKYRNIKANPAVAMSVIDPDN------ 72 (131)
T ss_dssp TTCHHHHHSCCCEEEEEECT--TSCEEEEEECCE----EC-SSCEEEEEETTSHHHHHHHHCCEEEEEEECSSC------
T ss_pred HHHHHHHhCCCcEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCCC------
Confidence 45789999999999999987 599999999998 55 578999999999999999999999999998652
Q ss_pred CCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCC-CcCCC-CCCCeEEEEEEEeEEE
Q 037690 101 DPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPE-MMDWP-EDHNFQIFKLEIEDIF 160 (192)
Q Consensus 101 dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~-~~~~~-~~~df~~~~l~~~~~~ 160 (192)
+ ..++++.|+++.|++++ + .++.+.+.+||+. ...+. ..++..++||+|+++.
T Consensus 73 -~----~~~v~v~G~a~~v~~~~-~-~~~~~~l~~ky~~~~~~~~~~~~~~~v~ri~~~~~~ 127 (131)
T 3f7e_A 73 -P----YRYLEVRGLVEDIVPDP-T-GAFYLKLNDRYDGPLTEPPADKADRVIIVVRPTAFS 127 (131)
T ss_dssp -T----TCEEEEEEEEEEEEECT-T-CHHHHHHHHHTTCSCCSCCTTGGGEEEEEEEEEEEE
T ss_pred -C----eeEEEEEEEEEEeccCc-c-HHHHHHHHHHhCCcccCCCCCCCCEEEEEEEeEEEE
Confidence 1 26999999999997642 3 4677888888854 22222 3468899999999875
No 18
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.74 E-value=3.5e-17 Score=124.44 Aligned_cols=120 Identities=13% Similarity=0.185 Sum_probs=95.7
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
.+++++||+++.+|+|||+. +|.||+++|+|+ .+ +|.+||+++ .++|.+||.+||+|||+|.+.+. .
T Consensus 12 ~~e~~~lL~~~~~~~Lat~~---dg~P~~~Pv~~~----~~-~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~----~ 78 (148)
T 3u5w_A 12 DYDIREMIQHKHVGRLGYVV---DDRPIIVPMTFR----FS-GGSFYSFTT-DGQKTNAMRKNDAICILFDQIES----Q 78 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEEE---TTEEEEEEEECE----EE-TTEEEEEEC-CHHHHHHHHHCCEEEEEEEEESS----S
T ss_pred HHHHHHHHhcCCEEEEEEcc---CCcEEEEEEEEE----EE-CCEEEEEEC-CchhHHHHhcCCcEEEEEEecCC----C
Confidence 67899999999999999995 599999999999 44 578999996 48999999999999999998653 1
Q ss_pred CCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCC------CcCCCC------CCCeEEEEEEEeEEE
Q 037690 100 RDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPE------MMDWPE------DHNFQIFKLEIEDIF 160 (192)
Q Consensus 100 ~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~------~~~~~~------~~df~~~~l~~~~~~ 160 (192)
....+|+++|+++.+++ ++|...+.+ +..|||. .+.|.. .... ++||+|+++.
T Consensus 79 -----~~y~sV~v~G~a~~v~d-~~e~~~al~-l~~ky~~~~~~~~~~p~~~~~~~~~~~~~-v~rI~i~~~s 143 (148)
T 3u5w_A 79 -----TKWRTVLVQGRYREIAR-EDEEEAIVR-IMANEPTWWEPAYTKTITKEGTARALKPV-FFRVDIEKLS 143 (148)
T ss_dssp -----SSEEEEEEEEEEEECCG-GGHHHHHHH-HHTTCSSCC-----------------CCE-EEEEEEEEEE
T ss_pred -----CcEEEEEEEEEEEEeCC-HHHHHHHHH-HHHHCCCCccccCCCcccccchhhccCcE-EEEEEeeEEE
Confidence 14578999999999986 456677777 8888985 334433 3456 9999999875
No 19
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.72 E-value=2e-16 Score=119.82 Aligned_cols=125 Identities=12% Similarity=0.128 Sum_probs=101.4
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
.++++++|+++++++|||++. +|.|++.+|.|+ ...++.+||+++..++|++||++||+|+|++.+... .
T Consensus 4 ~~~~~~~l~~~~~~~LaTv~~--dG~P~~~p~~~~----~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~----~ 73 (150)
T 2hhz_A 4 LKDIMHILEDMKVGVFATLDE--YGNPHARHAHIT----AANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEEG----Y 73 (150)
T ss_dssp HHHHHHHHHHTCEEEEEEECT--TCCEEEEEEEEE----EEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECST----T
T ss_pred HHHHHHHHhcCCeEEEEEECC--CCCEEEEEEEEE----EEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCCc----c
Confidence 467899999999999999997 599999999997 444567999999999999999999999999987642 0
Q ss_pred CCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCC---CCCeEEEEEEEeEEEEeccCC
Q 037690 100 RDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPE---DHNFQIFKLEIEDIFLINWFG 166 (192)
Q Consensus 100 ~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~---~~df~~~~l~~~~~~~v~GFG 166 (192)
....+++.|+++.+++ ++ .. .+..++|.++.|.+ .+++.+++|++.++.+.+.-+
T Consensus 74 ------~~~~v~i~G~a~~v~d--~~---~~-~~~~~~p~~~~~~~~~~~~~~~v~~i~~~~~~~~d~~~ 131 (150)
T 2hhz_A 74 ------LIQVVRVEGTARPVEN--DY---LK-TVFADNPYYQHIYKDESSDTMQVFQIYAGHGFYHSLTQ 131 (150)
T ss_dssp ------CCEEEEEEEEEEEECH--HH---HH-HHHTTCGGGGGGCC-----CCEEEEEEEEEEEEEEGGG
T ss_pred ------eeEEEEEEEEEEECCc--HH---HH-HHHHhChhhhhcccCCCCCcEEEEEEEccEEEEEECCC
Confidence 1267999999999974 23 22 55667788876654 368999999999999987433
No 20
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.70 E-value=5e-16 Score=118.29 Aligned_cols=125 Identities=13% Similarity=0.076 Sum_probs=103.1
Q ss_pred HHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 18 DAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 18 ~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
...++++++|+.+++++|||++ + |.|++.+|.|. ...+|.+||+++..+.|++||++||+|+|++.+..
T Consensus 18 ~~~~~~~~~l~~~~~~~LaTv~-d--G~P~~rpv~~~----~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~---- 86 (150)
T 2ig6_A 18 QGMKRALEFLKECGVFYLATNE-G--DQPRVRPFGAV----FEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK---- 86 (150)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEE-T--TEEEEEEECCC----EEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT----
T ss_pred cCHHHHHHHHHhCCeEEEEEcc-C--CceEEEEeEEE----EEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC----
Confidence 3467899999999999999998 4 99999999997 33467899999999999999999999999998643
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCC--CCCCeEEEEEEEeEEEEeccCCC
Q 037690 98 GERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWP--EDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~--~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
...|++.|+++.+++ .+ .++.+..++|.++.|. ..+++.+++|++.++.|-+.-|+
T Consensus 87 ---------~~~v~i~G~a~~v~d-~e----~~~~~~~~~p~~~~~~~~~dp~~~l~~v~~~~a~~wd~~~~ 144 (150)
T 2ig6_A 87 ---------GQWIRLTGEVANDDR-RE----VKELALEAVPSLKNMYSVDDGIFAVLYFTKGEGTICSFKGE 144 (150)
T ss_dssp ---------SCEEEEEEEEEECCC-HH----HHHHHHHHSGGGGGTCCTTSSCEEEEEEEEEEEEEECSSSC
T ss_pred ---------CeEEEEEEEEEEECC-HH----HHHHHHHhChHHHHhhcCCCCcEEEEEEECCEEEEEeCCCC
Confidence 157999999999975 22 2445666678887775 34789999999999999886554
No 21
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.70 E-value=4.3e-16 Score=118.12 Aligned_cols=131 Identities=9% Similarity=-0.003 Sum_probs=105.9
Q ss_pred CCchHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCC--CCCceEEEEecCChhhHhhhcCCCeEEEEee
Q 037690 14 PHPNDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNE--GSGVPYFYLTTLDPTARNALRDKRSSLAISE 91 (192)
Q Consensus 14 p~~~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~--~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~ 91 (192)
+.+.+..+.++++|+.+++|+|||+++ +| |++.+|.|. .+ .+|.+||+++..+.|++||++||+|+|++.+
T Consensus 3 ~~~~~l~~~~~~~l~~~~~~~LaT~~~--d~-~~~~pm~~~----~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~ 75 (147)
T 3dmb_A 3 ADPKELQDKFWKALKSDRTVMLGLDGV--ED-GHARPMTAQ----IEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSS 75 (147)
T ss_dssp TSHHHHHHHHHHHHHHHCEEEEEETTS--SS-CCCEEEEEE----CSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEEC
T ss_pred CChHHHHHHHHHHHhcCCEEEEEEEcC--CC-CceEeCccc----cccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEc
Confidence 456788899999999999999999986 34 899999997 33 3588999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHh-CCCCcCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 92 YPLGTCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTK-HPEMMDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 92 ~~~~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~r-hP~~~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
... ..-|++.|+++.+++ .+..+++-..+.++ +|+. ...+++.+++|+|+++.|-++-|.
T Consensus 76 ~~~------------~~~v~v~G~a~~~~d-~~~~~~~~~~~~~~~~~~g---~~dp~~~vl~v~p~~~e~W~~~~~ 136 (147)
T 3dmb_A 76 KGH------------DLFASISGSLREDTD-PAVVDRLWNPYVAAWYEGG---KDDPKLALLRLDADHAQIWLNGSS 136 (147)
T ss_dssp TTS------------SEEEEEEEEEEECCC-HHHHHHHCCHHHHHHCTTG---GGCTTCEEEEEEEEEEEEEECCCC
T ss_pred CCC------------CeEEEEEEEEEEecC-HHHHHHHhhHHHHHHccCC---CCCCCEEEEEEEcCEEEEEECCCC
Confidence 642 146999999999975 44455554455544 3543 246789999999999999998765
No 22
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=1.9e-16 Score=119.32 Aligned_cols=116 Identities=12% Similarity=0.070 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCC
Q 037690 19 AAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCG 98 (192)
Q Consensus 19 ~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~ 98 (192)
..+++++||+++.+|.|||+. +|.||+.+|+|+ .+ ++.+||+++. +.|.+||.+||+|||.|++.+.
T Consensus 10 ~~~e~~~lL~~~~~g~La~~~---dg~P~vvPv~f~----~~-~~~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~~---- 76 (138)
T 3fkh_A 10 NEQEALERLQSVSLGRVVVRR---SDEMDIFPVNFI----VD-KGAIYIRTAE-GNKLFSMNLNHDVLFEADEVKD---- 76 (138)
T ss_dssp CHHHHHHHHTTCSEEEEEEEE---TTEEEEEEEEEE----EE-TTEEEEEEEC---------CCSEEEEEEEEEET----
T ss_pred CHHHHHHHHccCCEEEEEEee---CCEEEEEEEEEE----EE-CCEEEEEeCC-ChHHHHhhcCCCEEEEEEECCC----
Confidence 467899999999999999997 499999999999 44 5789999998 7799999999999999998653
Q ss_pred CCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEE
Q 037690 99 ERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIF 160 (192)
Q Consensus 99 ~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~ 160 (192)
. . . .+|.++|+++.+++ ++|..++.++ .+..|.++....++||+|+++.
T Consensus 77 ~-~----~-~SV~v~G~a~~v~d-~~e~~~a~~~------~~~~~~~~~~~~~irI~p~~it 125 (138)
T 3fkh_A 77 G-K----A-WSVVVRATAEIVRK-LDEIAYADTL------ELKPWIPTLKYNYVRIVPNEIT 125 (138)
T ss_dssp T-E----E-EEEEEEEEEEECCS-HHHHHHHHHS------CCCCSSCCSSEEEEEEEEEEEE
T ss_pred C-C----C-EEEEEEEEEEEECC-HHHHHHHHhc------ccCCCCCCCccEEEEEEEEEEE
Confidence 1 1 2 39999999999986 4555555433 2567778889999999999976
No 23
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.67 E-value=1.5e-15 Score=113.94 Aligned_cols=127 Identities=19% Similarity=0.173 Sum_probs=96.3
Q ss_pred HHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 19 AAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 19 ~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
..++++++|+.+++++|||++. +|.|++++|+|+ .+++ +.+||+.+..+.|++||.+||+|||++.+.+.
T Consensus 6 ~~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~--- 76 (147)
T 2aq6_A 6 FDDKLLAVISGNSIGVLATIKH--DGRPQLSNVQYH----FDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDG--- 76 (147)
T ss_dssp HHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEECE----EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS---
T ss_pred ChHHHHHHHhcCCeEEEEEECC--CCCEEEEEEEEE----EcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCCC---
Confidence 4578999999999999999987 599999999998 5544 37899999999999999999999999987431
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCc----HHHHHHHHHHHHhCCCCcCCCC------CCCeEEEEEEEeEEEEec
Q 037690 98 GERDPENPACAKITLTGKLVLVDVST----KEAEFAEHALFTKHPEMMDWPE------DHNFQIFKLEIEDIFLIN 163 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~----~e~~~~~~~~~~rhP~~~~~~~------~~df~~~~l~~~~~~~v~ 163 (192)
...+++.|+++.+++.+ +..+.+.+.|....+....|.+ .+.+.+++|+|++++.-+
T Consensus 77 ---------~~~v~v~G~a~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~i~~~~ 143 (147)
T 2aq6_A 77 ---------WSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLP 143 (147)
T ss_dssp ---------SCEEEEEEECEECCCCCSTTSHHHHHHHHHHHHHTCSCSCHHHHHHHHHHTTEEEEEEECCEEEEEC
T ss_pred ---------cEEEEEEEEEEEcCCCCCccHHHHHHHHHHHHhccCCCCchhHHHHhcccCceEEEEEEEEEEEccc
Confidence 14799999999998642 2334444444432211122211 268899999999998765
No 24
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.66 E-value=3.1e-15 Score=114.87 Aligned_cols=124 Identities=10% Similarity=-0.053 Sum_probs=101.9
Q ss_pred HHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCc-eEEEEecCChhhHhhhcCCC-eEEEEeeCCCCC
Q 037690 19 AAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGV-PYFYLTTLDPTARNALRDKR-SSLAISEYPLGT 96 (192)
Q Consensus 19 ~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~-~~~~~s~~s~h~~Nl~~np~-vSl~v~~~~~~~ 96 (192)
..++++++|+.+++|+||| + |.|++.+|.|.. .+.+|. +||+++..++|.+||++||+ |||++.+...
T Consensus 5 ~~~~~~~~L~~~~~~~LaT---d--G~P~~rpv~~~~---~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~-- 74 (160)
T 2qea_A 5 LTHEFWDRLEDVRSGMLGI---K--GQGRLIPMSPQT---DDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGE-- 74 (160)
T ss_dssp HHHHHHHHHTTCCCEEEEE---T--TSSCCEEECCBC---CTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTT--
T ss_pred HHHHHHHHHhcCCEEEEEe---C--CCeeEEEeeeeE---ecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCCC--
Confidence 4678999999999999999 2 999999999971 345788 99999999999999999999 9999987642
Q ss_pred CCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCCcCCCCCCCeEEEEEEEeEEEEeccCC
Q 037690 97 CGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEMMDWPEDHNFQIFKLEIEDIFLINWFG 166 (192)
Q Consensus 97 ~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~~~~~~~~df~~~~l~~~~~~~v~GFG 166 (192)
...+++.|+++.+++ .++.+++.+.+.+++ |.. ...+++.+++|+|+++.+-++-+
T Consensus 75 ----------~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~~---~~~p~~~v~~i~p~~~e~w~~~~ 131 (160)
T 2qea_A 75 ----------GLYADLDGTLERSTD-REALDEFWSFVADAWFDGG---QHDPDVCLLKFTPASGEISITEG 131 (160)
T ss_dssp ----------TEEEEEEEEEEEECC-HHHHHHSCCHHHHHHCTTC---SSCTTEEEEEEEEEEEEEEEECC
T ss_pred ----------CeEEEEEEEEEEEcC-HHHHHHHHHHHHHHHccCC---CCCCCEEEEEEECCEEEEEECCC
Confidence 257999999999976 455566656666654 543 34578999999999999998754
No 25
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.66 E-value=7.3e-16 Score=120.39 Aligned_cols=133 Identities=11% Similarity=0.087 Sum_probs=103.1
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC-C
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC-G 98 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~-~ 98 (192)
.+++++||+++.+|+|||+++ +|.|++++|+|+ .+ +|.+||++++.+.|.+||.+||+|+|++........ .
T Consensus 28 ~~ei~~~L~~~~~~~Lat~~~--dg~P~v~Pv~f~----~~-~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~is~~ 100 (178)
T 2fg9_A 28 KQRIESIILQADACFVGITDL--EGNPYVVPMNFG----YE-NDTLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQH 100 (178)
T ss_dssp HHHHHHHHHHCSCEEEEEECT--TSCEEEEEECCE----EE-TTEEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEEEC
T ss_pred HHHHHHHHHhCCEEEEEEECC--CCcEEEEEEEEE----EE-CCEEEEEcCCcchHHHHhhcCCcEEEEEEeCCceeecc
Confidence 478999999999999999997 599999999999 55 579999999999999999999999999987653100 0
Q ss_pred CCCCCC--CCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCC----CCCeEEEEEEEeEEEE
Q 037690 99 ERDPEN--PACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPE----DHNFQIFKLEIEDIFL 161 (192)
Q Consensus 99 ~~dp~~--~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~----~~df~~~~l~~~~~~~ 161 (192)
...+.. .....|++.|+++.+++ .++...+.+++.++++.. .|.. ...+.+|+|+|+++.-
T Consensus 101 ~~~~~~~t~~y~sV~v~G~a~~v~d-~~e~~~~l~~l~~~y~~~-~~~~~~~~~~~~~v~rI~i~~itg 167 (178)
T 2fg9_A 101 KQVACSYSMRSESAMCRGKVEFIED-MEEKRHALDIIMRHYTKD-QFSYSDPAVRNVKVWKVPVDQMTG 167 (178)
T ss_dssp ----CEEEEEEEEEEEEEECEEECS-HHHHHHHHHHHHHTTCSS-CCCCCHHHHHTCEEEEEEEEEEEE
T ss_pred CCCCCCCcccEEEEEEEEEEEEECC-HHHHHHHHHHHHHHhCCC-CCCcChHhhCCeEEEEEEeEEEEE
Confidence 001111 14578999999999976 456778888999998542 2321 2568999999998753
No 26
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.65 E-value=2.8e-15 Score=113.28 Aligned_cols=122 Identities=14% Similarity=0.173 Sum_probs=90.5
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
.+++++||+++.+|+|||++ +|.|++++|+|+ .+ +|.+||+. ..+.|.+||.+||+|||++.+...
T Consensus 9 ~~~~~~~L~~~~~~~Lat~~---~g~P~~~pv~~~----~~-~~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~----- 74 (149)
T 2hq9_A 9 ALECTKVLTANRVGRLACAK---DGQPYVVPLYYA----YS-DAHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQ----- 74 (149)
T ss_dssp HHHHHHHHHHCCEEEEEEEE---TTEEEEEEEECE----EE-TTEEEEEE-CSSHHHHHHHHCCEEEEEEEEECS-----
T ss_pred HHHHHHHHHhCCEEEEEEcc---CCeEEEEEEEEE----EE-CCEEEEEe-CccHHHHHHhcCCcEEEEEEecCC-----
Confidence 46799999999999999998 499999999999 55 57899995 778999999999999999998642
Q ss_pred CCCCCCCcceEEEEEEEEEecCCcH---HHHHHHHHHHHhCC-----C-CcCCC----CCCCeEEEEEEEeEEE
Q 037690 100 RDPENPACAKITLTGKLVLVDVSTK---EAEFAEHALFTKHP-----E-MMDWP----EDHNFQIFKLEIEDIF 160 (192)
Q Consensus 100 ~dp~~~~~~rvtl~G~~~~i~~~~~---e~~~~~~~~~~rhP-----~-~~~~~----~~~df~~~~l~~~~~~ 160 (192)
.+ ...+|++.|+++.+++.++ +...+.+ +..||+ . ...|. ......++||.|+++.
T Consensus 75 --~~--~y~sV~v~G~a~~v~d~~~~~~~~~~~l~-l~~ky~~~w~~~~~~~~~~~~~~~~~~~v~ri~~~~i~ 143 (149)
T 2hq9_A 75 --GR--GWKSVVVDGRYEELPDLIGHKLQRDHAWS-VLSKHTDWWEPGALKPVTPPTADSAPHVFFRILIEQVS 143 (149)
T ss_dssp --TT--CEEEEEEEEEEEECCSCGGGHHHHHHHHH-HHHHHHHHHC--------------CCCEEEEEEEEEEE
T ss_pred --CC--cEEEEEEEEEEEEEcCcccchHHHHHHHH-HHHhcccccCCCcccccccccccCCceEEEEEEeEEeE
Confidence 11 4578999999999987532 2222222 555553 2 22232 1356789999999875
No 27
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.65 E-value=4.7e-15 Score=116.25 Aligned_cols=130 Identities=13% Similarity=0.116 Sum_probs=98.7
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeC----CCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEY----PLG 95 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~----~~~ 95 (192)
.+.+++||+++.+|+|||++ +|.|++++|+|+ .+ +|.+||++++.+.|.+||.+||+|+|+|.+. ...
T Consensus 15 ~e~i~~~L~~~~~~~Lat~~---~g~P~~~Pv~f~----~~-~~~ly~hta~~~~k~~~l~~np~V~~~v~~~~~~~~~~ 86 (185)
T 2hti_A 15 EKKITEFLNKARTGFLGLST---NDQPYVIPLNFV----WH-NHAIYFHGASEGRKIKMIEANPEVCFTICEDLGTIVSP 86 (185)
T ss_dssp HHHHHHHHHHCCCEEEEEEE---TTEEEEEEECCE----EE-TTEEEEEEESSSHHHHHHHHCCEEEEEEEECC------
T ss_pred HHHHHHHHhcCCEEEEEEee---CCEEEEEEEEEE----EE-CCEEEEEeCCcCHHHHHhhcCCeEEEEEEecccccccc
Confidence 45599999999999999998 389999999999 55 5899999999999999999999999999987 421
Q ss_pred CCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCC-------cCC---C--CCCCeEEEEEEEeEEEE
Q 037690 96 TCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEM-------MDW---P--EDHNFQIFKLEIEDIFL 161 (192)
Q Consensus 96 ~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~-------~~~---~--~~~df~~~~l~~~~~~~ 161 (192)
. ...+......|.+.|+++.+++ .++...+.+.+.++| |.. ..+ . ......+++|+|+++.-
T Consensus 87 v---~~~~t~~y~sV~v~G~a~~v~d-~~e~~~~l~~l~~~y~~~~~~~p~~~~~~~~~~~~~~~~~~v~rI~i~~itg 161 (185)
T 2hti_A 87 V---PAHTDTAYMSVIIFGTIEPVSA-IEEGTEAMQQMLDKYVPGYYHSPLAASHVEKYRSSLGSRTAIYKISCRERTA 161 (185)
T ss_dssp ----------CEEEEEEEEEEEECCC-HHHHHHHHHHHHHHHCC-----------------CCCSSEEEEEEEEEEEEE
T ss_pred c---cccCcceEEEEEEEEEEEEECC-HHHHHHHHHHHHHHhCCCCCCcccchhhccccchHHhCCeEEEEEEeEEEEE
Confidence 0 0011225678999999999976 456777888888887 543 111 1 13568999999998764
No 28
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.64 E-value=2.6e-15 Score=113.64 Aligned_cols=118 Identities=13% Similarity=0.102 Sum_probs=92.8
Q ss_pred HHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCC---CCceEEEEecCChhhHhhhcCCCeEEEEeeCCCC
Q 037690 19 AAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEG---SGVPYFYLTTLDPTARNALRDKRSSLAISEYPLG 95 (192)
Q Consensus 19 ~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~---~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~ 95 (192)
..+++++||+++.+|+|||+. +|.||+++|+|+ .+. +|.+||+++ .++|.+||.+||+|+|.+.+...
T Consensus 16 ~~~e~~~~L~~~~~~~Lat~~---dg~P~v~Pv~f~----~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~~- 86 (148)
T 3cp3_A 16 DSSDSLSRLSSESVGRLVVHR---KDDLDIFPVNFV----LDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFDD- 86 (148)
T ss_dssp CHHHHHHHHHTCSEEEEEEEE---TTEEEEEEEEEE----EECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC--
T ss_pred CHHHHHHHHhcCCEEEEEEEe---CCEEEEEEEEEE----EEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECCC-
Confidence 467899999999999999996 599999999998 332 679999999 89999999999999999998542
Q ss_pred CCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEE
Q 037690 96 TCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFL 161 (192)
Q Consensus 96 ~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~ 161 (192)
+ ....|.++|+++.+++ .++..++.+. .++.|.+.+.+.++||+|+++.-
T Consensus 87 ------~---~~~sV~v~G~a~~v~d-~~e~~~~l~~------~~~~~~~~~~~~viri~~~~~tg 136 (148)
T 3cp3_A 87 ------A---EGWSVVLKGNAYVVRD-TEEARHADTL------GLKPWLPTLKYNFVRIDVREVSG 136 (148)
T ss_dssp ----------CEEEEEEEEEEEECCC-HHHHHHHTTS------CCCCCCTTCCCEEEEEEEEEEEE
T ss_pred ------C---CCeEEEEEEEEEEECC-HHHHHHHHhc------cccccCCCCceEEEEEEeEEEEE
Confidence 1 1248999999999976 3444333222 34667777899999999999863
No 29
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.63 E-value=3e-15 Score=117.67 Aligned_cols=128 Identities=9% Similarity=-0.021 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCC--CCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 17 NDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNE--GSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 17 ~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~--~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.+..+.+.+||+.+++|+|||+++ +| |++.+|.|. .+ .+|.+||+++..+.|++||++||+|+|++.+...
T Consensus 25 ~el~e~i~~~L~~~~~~~LaTv~~--dg-p~~rpm~~~----~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~ 97 (182)
T 3u35_A 25 KELQEKFWKALKSDRTVMLGLDGV--ED-GHARPMTAQ----IEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGH 97 (182)
T ss_dssp HHHHHHHHHHHHHHCEEEECCTTS--GG-GCCEEEECB----CSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTTS
T ss_pred HHHHHHHHHHHccCCEEEEEEecC--CC-CcEEEEEEE----EeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCCC
Confidence 678899999999999999999986 34 899999997 33 3688999999999999999999999999987642
Q ss_pred CCCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHh-CCCCcCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 95 GTCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTK-HPEMMDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 95 ~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~r-hP~~~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
..-|++.|+++.+++ .+..+++-..+.++ +|+. ...+++.++||.|+++.|-++.++
T Consensus 98 ------------~~~V~v~G~a~vv~D-~e~~~~lw~~~~~~~~p~g---~~dP~~~vlrv~p~~~e~Wd~~~~ 155 (182)
T 3u35_A 98 ------------DLFASISGSLREDTD-PAMVDRLWNPYVAAWYEGG---KTDPNLALLRLDADHAQIWLNESS 155 (182)
T ss_dssp ------------SEEEEEEEEEEECCC-HHHHHHHCCHHHHTTCTTG---GGCTTEEEEEEEEEEEEEEEEEEE
T ss_pred ------------CeEEEEEEEEEEEcC-HHHHHHHHHHHHHHhccCC---CCCCCEEEEEEEeCEEEEEeCCCC
Confidence 146999999999975 44445554445443 3432 245899999999999999997664
No 30
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=3.9e-14 Score=106.48 Aligned_cols=111 Identities=16% Similarity=0.129 Sum_probs=88.7
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
.+.++++|++ ++++|||+++ +|.|+++++.|+. ...++.+||..+..+.|++||++||+|+|++.+.+.
T Consensus 29 ~~~~~~~l~~-~~~~LATv~~--dG~P~~~p~~f~~---~~d~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~~----- 97 (140)
T 2htd_A 29 TEEQVNLFKN-NLVYLATVDA--DGNPQVGPKGSMT---VLDPSHLQYLEKTKGEAYENIKRGSKVALVAADVPS----- 97 (140)
T ss_dssp CHHHHHHHHH-SCEEEEEECT--TCCEEEEEETTCE---EEETTEEEEEESSCCHHHHHHHTTCCEEEEEEETTT-----
T ss_pred CHHHHHHHhC-CCEEEEEECC--CCCEEEecceeEE---ecCCCEEEEeccCCchHHHHhhcCCeEEEEEEecCC-----
Confidence 4568899999 9999999998 5999999999951 124678999999999999999999999999998753
Q ss_pred CCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEE
Q 037690 100 RDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIF 160 (192)
Q Consensus 100 ~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~ 160 (192)
..++++.|+++.++++ ++.+++ ..++ +.+...+++|+|++++
T Consensus 98 -------~~~v~i~G~a~~v~d~-~~~~~l----~~~~-------~~p~~~vi~i~v~~v~ 139 (140)
T 2htd_A 98 -------HTAVRVLATAEVHEDD-DYAKKV----LAKT-------EFPNAFVVNLNIEEVF 139 (140)
T ss_dssp -------TEEEEEEEEEEEESSS-HHHHHH----HTTS-------SCTTSEEEEEEEEEEE
T ss_pred -------CCEEEEEEEEEEecCh-HHHHHH----hhCC-------CCceEEEEEEEEEEee
Confidence 2589999999999874 444444 2111 2345589999999986
No 31
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.56 E-value=2.1e-14 Score=114.92 Aligned_cols=143 Identities=11% Similarity=0.073 Sum_probs=103.4
Q ss_pred cCCCCCCchH-HHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEE
Q 037690 9 TISKKPHPND-AAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSL 87 (192)
Q Consensus 9 ~~~~~p~~~~-~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl 87 (192)
+.++++.... -.+++++||+++.+|+|||++ +|.|++++|+|+ .+ ++.+||++++.++|.+||.+||+|+|
T Consensus 10 ~~mR~~~~~~~d~~ei~~~L~~~~~~~Lat~~---dg~P~v~Pv~f~----~~-~~~lyfhta~~~~k~~~l~~np~V~~ 81 (209)
T 2fur_A 10 KVTRYPERASYSDEDLVAMLDRNFTCTVSFID---GGIPYAIPMMLA----SE-GKTIYLHGSMKSRIYGILKTGQLIAI 81 (209)
T ss_dssp -------CEECCHHHHHHHHHHCSEEEEEEEE---TTEEEEEEEECE----EE-TTEEEEEEETTSHHHHHHHTTCCEEE
T ss_pred ccccchhhccCCHHHHHHHHHhCCEEEEEEcc---CCEEEEEEEEEE----EE-CCEEEEEeCCcCHHHHHhhcCCeEEE
Confidence 4455554432 356789999999999999998 499999999998 44 58999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCC--CCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCC-c---CCCC--CCCeEEEEEEEeE
Q 037690 88 AISEYPLGTCGERDP--ENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEM-M---DWPE--DHNFQIFKLEIED 158 (192)
Q Consensus 88 ~v~~~~~~~~~~~dp--~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~-~---~~~~--~~df~~~~l~~~~ 158 (192)
+|........ ...+ ...+...|.+.|+++.+++ .++...+.+.+.++| |.- . .+.. .....+++|+|++
T Consensus 82 ~v~~~~~~v~-~~~~~~~t~~y~sV~v~G~a~~v~d-~~e~~~~l~~l~~~y~p~~~~~~~~~~~~~~~~~~virI~i~~ 159 (209)
T 2fur_A 82 SLLEINGIVL-AKEIKNNSINYVSALIFGRPYEIDD-TEKKIEVFRLLTEKLVKGRWDNSIKPSYEDLNGVFVFAVKPET 159 (209)
T ss_dssp EEEEEEEEEE-CSBGGGCEEEEEEEEEEECCEECCC-HHHHHHHHHHHHHHHSTTTGGGSBCCCHHHHHTEEEEEECEEE
T ss_pred EEEcCCeeec-CCCCCCCccEEEEEEEEEEEEEECC-HHHHHHHHHHHHHHhCCCcccccchhhHHhhCCEEEEEEEeEE
Confidence 9987643100 0000 1124678999999999976 456777888888887 641 1 1111 2578999999999
Q ss_pred EEE
Q 037690 159 IFL 161 (192)
Q Consensus 159 ~~~ 161 (192)
+.-
T Consensus 160 isg 162 (209)
T 2fur_A 160 FSM 162 (209)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 32
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.55 E-value=8.1e-14 Score=106.34 Aligned_cols=109 Identities=12% Similarity=0.032 Sum_probs=90.8
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCC-CCeeeeEeccccCCCC-CCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLG-GAPFGNVVSFSDGLPN-EGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTC 97 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~-G~P~~S~v~y~d~~~~-~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~ 97 (192)
.+++++||+.+++++|||+++ + |.|+++++.|+ . ..+|.+||+++..++|++||++||+|||++.+.+
T Consensus 11 ~~e~~elL~~~~~~~LATv~~--d~G~P~~sp~~~~----~~~d~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~---- 80 (151)
T 2q9k_A 11 SEQQMKALTDLPLVFLITHDQ--SKSWPITHAISWV----YAKDETTIRFAIEADSLLVKTLADHPVFTLIFFADQ---- 80 (151)
T ss_dssp CHHHHHHTSSCCCEEEEECCT--TSSSCEEEEECCE----EEEETTEEEEEEETTCTHHHHHHHSCCEEEEEEETT----
T ss_pred HHHHHHHHhcCCEEEEEEEcC--CCCcEeEeeeEEE----EEeCCCEEEEEECCCcHHHHHHHhCCcEEEEEECCC----
Confidence 358999999999999999997 7 99999999887 2 1368999999999999999999999999998754
Q ss_pred CCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 98 GERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 98 ~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
..+.+.|+++.+.+.. + +.|. +..+++++|++++-+--.|.
T Consensus 81 ----------~~~~i~G~A~~v~d~~-e---------------~~~~---~~~li~v~i~~v~~~~f~g~ 121 (151)
T 2q9k_A 81 ----------STYSLTCTDVAAWETT-A---------------RLPL---KVALYEGQIKEVRDILFYGA 121 (151)
T ss_dssp ----------EEEEEEEEEEEEECCS-S---------------CCSS---CEEEEEEEEEEEEECSCTTC
T ss_pred ----------CEEEEEEEEEEEeCcc-c---------------cCCc---ceEEEEEEEEEEEEccccCc
Confidence 1478999999998632 1 1233 66899999999999975554
No 33
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=99.55 E-value=7.1e-15 Score=118.40 Aligned_cols=142 Identities=13% Similarity=0.133 Sum_probs=108.2
Q ss_pred CCCCCCchHHHHHHHHHHhhCCEEEEEeec----CCCCCCeeeeEeccccCCCCCCCCc--eEEEEecCChhhHhhhcCC
Q 037690 10 ISKKPHPNDAAAFARWLVSQNYWGVLNTIS----SDLGGAPFGNVVSFSDGLPNEGSGV--PYFYLTTLDPTARNALRDK 83 (192)
Q Consensus 10 ~~~~p~~~~~a~~ar~Ll~~~~~~~LAT~~----~~~~G~P~~S~v~y~d~~~~~~~g~--~~~~~s~~s~h~~Nl~~np 83 (192)
.++++.. ...+++++||+++.+|+|||++ + +|.|++++|+|+ .+ +|. +||++++.++|.+||.+||
T Consensus 36 ~mRr~~r-~d~~ei~~~L~~~~~~~Lat~~~~~~~--dg~P~v~Pv~f~----~d-~~~~~Lyfhta~~~~K~~~l~~np 107 (216)
T 2vpa_A 36 SRRPQNR-QSDEWIRELLLRGTIARVATLWQGEDG--AAFPFITPLAYA----YR-PEQGDLVYHTNVVGRLRANAGQGH 107 (216)
T ss_dssp CCCSTTB-CCHHHHHHHHHHCCEEEEEEEEECTTS--CEEEEEEEEECE----EE-TTTTEEEEECCCCCSSBSSCSSEE
T ss_pred ccccccc-CCHHHHHHHHHhCCEEEEEEccCCCCC--CCceEEEEEEEE----EE-CCeeEEEEEecCcCHHHHHhccCC
Confidence 5666666 6678899999999999999998 5 599999999998 44 556 9999999999999999999
Q ss_pred CeEEEEeeCCCCCCCCCCCC--CCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCCc------CCCC--CCCeEEE
Q 037690 84 RSSLAISEYPLGTCGERDPE--NPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEMM------DWPE--DHNFQIF 152 (192)
Q Consensus 84 ~vSl~v~~~~~~~~~~~dp~--~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~~------~~~~--~~df~~~ 152 (192)
+|+|+|........ ...+. ..+...|.+.|+++.+ + .+|..++.+.+..++ |... .+.. .....++
T Consensus 108 ~V~~~v~~~~~~v~-~~~~~~~t~~y~sV~v~G~a~~v-d-~~e~~~~l~~l~~~y~p~~~~~~~~~~~~~~~l~~~~vi 184 (216)
T 2vpa_A 108 PATLEVSEIGQFLP-SNSPLELSVQYRSVMVFGTARVL-A-GEDARAALTTLSERVFPGLKVGETTRPISEDDLKRTSVY 184 (216)
T ss_dssp EEEEEEEEEEEEEC-CSSGGGCEEEEEEEEEEEEEEEC-C-HHHHHHHHHHHHHHHSTTCCBTTTBCCCCHHHHHTCCEE
T ss_pred cEEEEEEeCCeecc-CccCCCCcccEEEEEEEEEEEEE-C-HHHHHHHHHHHHHHhCCCCccccccchhhHHhhCCeEEE
Confidence 99999988653100 00111 1246789999999999 5 567778888888887 6421 1111 2467999
Q ss_pred EEEEeEEEEe
Q 037690 153 KLEIEDIFLI 162 (192)
Q Consensus 153 ~l~~~~~~~v 162 (192)
+|+|+++.--
T Consensus 185 rI~i~~itgK 194 (216)
T 2vpa_A 185 SLSIDRWSGK 194 (216)
T ss_dssp EEEEEEEEEE
T ss_pred EEEeeEEEEE
Confidence 9999987654
No 34
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=99.42 E-value=1.8e-12 Score=98.27 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=104.1
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCC
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGE 99 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~ 99 (192)
.+.+.++|..++.++|||.. +|.|.+.+|.|.. +...++.+||++++.+.++++|.+||+|+|+....+. .
T Consensus 4 ~~~i~~~L~~~~~~~LAT~~---~g~P~vR~v~f~~--~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~----~ 74 (145)
T 3ba3_A 4 ISLLKQVVQSTNKIALSTAV---NNEADVKIVNFVW--YEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDG----T 74 (145)
T ss_dssp CHHHHHHHHTEEEEEEEEEE---TTEEEEEEEECEE--CTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTT----C
T ss_pred HHHHHHHHHhCCcEEEEECC---CCCEEEEEEEEEE--EecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCC----C
Confidence 35678899999999999955 5999999999860 0244689999999999999999999999998766542 1
Q ss_pred CCCCCCCcceEEEE-EEEEEecCCcHHHHHHHHHHHHhCCCCcCCCC--CCCeEEEEEEEeEEEEeccCC
Q 037690 100 RDPENPACAKITLT-GKLVLVDVSTKEAEFAEHALFTKHPEMMDWPE--DHNFQIFKLEIEDIFLINWFG 166 (192)
Q Consensus 100 ~dp~~~~~~rvtl~-G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~--~~df~~~~l~~~~~~~v~GFG 166 (192)
. ...-|.+. |+|+..+++ ...+++.+..+.|.++.+.+ ...+.+|+|.+.++.+.++=|
T Consensus 75 ~-----~~~~IRi~~G~a~~~~~~---~~~~k~~~~e~~P~~k~~y~~~~~~l~vf~i~~~~a~~~~~~~ 136 (145)
T 3ba3_A 75 A-----GNPYLRAQHVKLQRSTKT---MTDLLPQYLETVPNYQQVWDAIGSTLVVFELKLTDLFVDAGVG 136 (145)
T ss_dssp T-----TCCEEEEEEEEEEECSCC---HHHHHHHHHHHSTTHHHHHHHHGGGEEEEEEECSEEEEECCTT
T ss_pred c-----cceEEEEEeEEEEEcCCc---hHHHHHHHHHhChhhhhcccCCCCcEEEEEEECCEEEEECCCC
Confidence 1 23578889 999987542 24578999999999988764 357899999999999999544
No 35
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=99.38 E-value=7.1e-12 Score=99.84 Aligned_cols=132 Identities=12% Similarity=0.074 Sum_probs=102.2
Q ss_pred HHHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecCChhhHhhhcCCCeEEEEeeCCCC---
Q 037690 20 AAFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTARNALRDKRSSLAISEYPLG--- 95 (192)
Q Consensus 20 a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~--- 95 (192)
.+++++||+.+.+|+|+|.+ +|.||+++++|+ .+++ +.+|+|+++.+++.++|.+ ++|+++|.....-
T Consensus 12 ~~~i~~il~~~~~g~L~~~~---~~~py~~plpf~----~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yisp 83 (202)
T 2ol5_A 12 PDVAYQVIEENSFATLVSMH---QRELFATHLPLL----LDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYISP 83 (202)
T ss_dssp CTHHHHHHHHSCEEEEEEEE---TTEEEEEEEECE----ECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEECG
T ss_pred HHHHHHHHHHCCEEEEEEcc---CCccEEEEeeEE----EECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEech
Confidence 45789999999999999998 489999999999 4432 4899999999999999999 9999999876531
Q ss_pred --CCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhC-CCC-cCC--------CC--CCCeEEEEEEEeEEE
Q 037690 96 --TCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKH-PEM-MDW--------PE--DHNFQIFKLEIEDIF 160 (192)
Q Consensus 96 --~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rh-P~~-~~~--------~~--~~df~~~~l~~~~~~ 160 (192)
+.......+.+..+|.++|+++.+++ ++|...+.+.+..+| |.. ..| .. ...+..++|.|+++.
T Consensus 84 s~y~~~~~vpT~nY~SV~~~G~~~~v~D-~~ek~~~L~~L~~~~e~~~~~~w~~~~~~~~~~~~l~~i~v~~I~I~~i~ 161 (202)
T 2ol5_A 84 SWYETNQAVPTWNYVAVHVYGNVELIND-QGEVMQSLHDMVEKYEAPGSRYQLSEVDAGMLSGMNKGIQAFKIIIKRIE 161 (202)
T ss_dssp GGSSCSCCCCEEEEEEEEEEEEEEECCC-HHHHHHHHHHHHHHHSCTTCCCCCC------CTHHHHSEEEEEEEEEEEE
T ss_pred hhcccCCCCCCcceEEEEEEEEEEEECC-HHHHHHHHHHHHHHhcCCCCCCccccCCHHHHHHHhCCeEEEEEEEeEEE
Confidence 10000011248899999999999976 456788888888887 542 345 11 257899999999873
No 36
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=99.37 E-value=5.6e-12 Score=100.21 Aligned_cols=121 Identities=18% Similarity=0.149 Sum_probs=91.1
Q ss_pred HHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCCCCCC
Q 037690 24 RWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGERDPE 103 (192)
Q Consensus 24 r~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~ 103 (192)
...+...+.++|||+++ +|.|.+.+|.+.. .+.+| +||+....+.|++||.+||+|+|++.+...
T Consensus 25 ~~~~~~~~~~~LATv~~--dG~P~~R~v~~~~---~d~~g-l~F~T~~~S~K~~~L~~np~v~l~f~~~~~--------- 89 (199)
T 1dnl_A 25 EAKLADPTAMVVATVDE--HGQPYQRIVLLKH---YDEKG-MVFYTNLGSRKAHQIENNPRVSLLFPWHTL--------- 89 (199)
T ss_dssp HTTCSCTTEEEEEEECT--TSCEEEEEEECCE---EETTE-EEEEEETTSHHHHHHHHCCEEEEEECCGGG---------
T ss_pred HcCcCCCcEEEEEEECC--CCCEEEEEEEEEE---EcCCE-EEEEECCCCHHHHHHhhCCeEEEEEEcCCC---------
Confidence 34567889999999998 5999999999851 23444 999999999999999999999999988642
Q ss_pred CCCcceEEEEEEEEEecCCcHHHHHHH------------------------------HHHHHhCCCCcCCCCCCCeEEEE
Q 037690 104 NPACAKITLTGKLVLVDVSTKEAEFAE------------------------------HALFTKHPEMMDWPEDHNFQIFK 153 (192)
Q Consensus 104 ~~~~~rvtl~G~~~~i~~~~~e~~~~~------------------------------~~~~~rhP~~~~~~~~~df~~~~ 153 (192)
...|.+.|+|+.+++ ++.+++- +.+..+||+. .....+.+.+|+
T Consensus 90 ---~~qvri~G~a~~v~d--~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~-~~p~p~~~~~~~ 163 (199)
T 1dnl_A 90 ---ERQVMVIGKAERLST--LEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQG-EVPLPSFWGGFR 163 (199)
T ss_dssp ---TEEEEEEEEEEECCH--HHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTS-SCCCCTTEEEEE
T ss_pred ---CEEEEEEEEEEEeCC--ccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCC-CCCCCCceEEEE
Confidence 257999999999975 2322111 1344455532 233346799999
Q ss_pred EEEeEEEEeccC
Q 037690 154 LEIEDIFLINWF 165 (192)
Q Consensus 154 l~~~~~~~v~GF 165 (192)
|.|+++.|..|=
T Consensus 164 v~p~~vefw~~~ 175 (199)
T 1dnl_A 164 VSLEQIEFWQGG 175 (199)
T ss_dssp ECCSEEEEEECC
T ss_pred EECCEEEEEecC
Confidence 999999988763
No 37
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=99.34 E-value=5.8e-11 Score=96.24 Aligned_cols=123 Identities=10% Similarity=0.030 Sum_probs=96.2
Q ss_pred HHhhCCEEEEEeec-CCCCCCeeeeEeccccCCCCCCCCceEEEEecC-ChhhHhhhcCCCeEEEEeeCCCCCCCCCCCC
Q 037690 26 LVSQNYWGVLNTIS-SDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTL-DPTARNALRDKRSSLAISEYPLGTCGERDPE 103 (192)
Q Consensus 26 Ll~~~~~~~LAT~~-~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~-s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~ 103 (192)
.+...+.++|||++ + +|.|.+-+|.+-+ .+++| ++|++... +.|.+||.+||+|+|++.....
T Consensus 51 ~~~~~~~~~LATvd~~--dG~P~~R~V~lk~---~d~~g-~~F~Tn~~~S~K~~eL~~NP~val~f~~~~~--------- 115 (228)
T 1ci0_A 51 RETLPEAITFSSAELP--SGRVSSRILLFKE---LDHRG-FTIYSNWGTSRKAHDIATNPNAAIVFFWKDL--------- 115 (228)
T ss_dssp SCSCTTEEEEEEEETT--TTEEEEEEEECCE---ECSSS-EEEEEECSSSHHHHHHHHCCEEEEEEEETTT---------
T ss_pred CCCCCCEEEEEEeeCC--CCCeEEEEEEEEE---ECCCE-EEEEeCCCCCcchHHHhhCCeEEEEEEeCCC---------
Confidence 45677899999999 8 5999999999851 34455 99999999 9999999999999999998752
Q ss_pred CCCcceEEEEEEEEEecCC----------------------------cHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEE
Q 037690 104 NPACAKITLTGKLVLVDVS----------------------------TKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLE 155 (192)
Q Consensus 104 ~~~~~rvtl~G~~~~i~~~----------------------------~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~ 155 (192)
...|.|.|+|+.+.++ -++.+.....+..+|++.+.....+.+..|+|.
T Consensus 116 ---~rqVrI~G~ae~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~~~~~p~p~~w~g~rv~ 192 (228)
T 1ci0_A 116 ---QRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYWGGLRIV 192 (228)
T ss_dssp ---TEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTTEEEEEEE
T ss_pred ---CEEEEEEEEEEEcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEEEE
Confidence 2579999999999531 123333344556778765445566789999999
Q ss_pred EeEEEEeccCC
Q 037690 156 IEDIFLINWFG 166 (192)
Q Consensus 156 ~~~~~~v~GFG 166 (192)
|+++.|..|=+
T Consensus 193 P~~iEfWq~~~ 203 (228)
T 1ci0_A 193 PLEIEFWQGRP 203 (228)
T ss_dssp EEEEEEEECCT
T ss_pred ccEEEEeeCCC
Confidence 99999998643
No 38
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=99.25 E-value=1.2e-10 Score=96.05 Aligned_cols=121 Identities=14% Similarity=0.094 Sum_probs=92.3
Q ss_pred HHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCCCCCCCC
Q 037690 26 LVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGERDPENP 105 (192)
Q Consensus 26 Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~~~ 105 (192)
-+...+.++|||+++ +|.|.+-+|.+-+ .+.+| ++|+....+.|++||.+||+|+|++.+.+.
T Consensus 74 ~l~e~~~~~LATvd~--dG~P~~R~V~lk~---~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~----------- 136 (261)
T 1nrg_A 74 DIGEANAMCLATCTR--DGKPSARMLLLKG---FGKDG-FRFFTNFESRKGKELDSNPFASLVFYWEPL----------- 136 (261)
T ss_dssp TCSCTTEEEEEEECT--TSCEEEEEEECCC---EETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG-----------
T ss_pred cCCCCcEEEEEEECC--CCCeeEEEEEEEE---EcCCE-EEEEECCCChhHHHHhhCCeEEEEEEeCCC-----------
Confidence 356678999999998 6999999999851 34445 999999999999999999999999998752
Q ss_pred CcceEEEEEEEEEecCCcHHHHHHH------------------------------HHHHHhCCCCcCCCCCCCeEEEEEE
Q 037690 106 ACAKITLTGKLVLVDVSTKEAEFAE------------------------------HALFTKHPEMMDWPEDHNFQIFKLE 155 (192)
Q Consensus 106 ~~~rvtl~G~~~~i~~~~~e~~~~~------------------------------~~~~~rhP~~~~~~~~~df~~~~l~ 155 (192)
...|.|.|+|+.+.++ +.+++- ..+..+||+. .....+.+..|+|.
T Consensus 137 -~rqVrI~G~ae~v~d~--e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~-~vp~p~~w~g~rv~ 212 (261)
T 1nrg_A 137 -NRQVRVEGPVKKLPEE--EAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQ-EVPKPKSWGGYVLY 212 (261)
T ss_dssp -TEEEEEEEEEEECCHH--HHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTS-CCCCCTTEEEEEEC
T ss_pred -CEEEEEEEEEEEecCc--chHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccC-CCCCCCcEEEEEEE
Confidence 2579999999999752 332221 1244455543 23334689999999
Q ss_pred EeEEEEeccCCC
Q 037690 156 IEDIFLINWFGG 167 (192)
Q Consensus 156 ~~~~~~v~GFG~ 167 (192)
|+++.|..|-..
T Consensus 213 P~~vEfwq~~~~ 224 (261)
T 1nrg_A 213 PQVMEFWQGQTN 224 (261)
T ss_dssp CSEEEEEECCTT
T ss_pred ccEEEEEECCCC
Confidence 999999987654
No 39
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=99.25 E-value=1.4e-10 Score=93.61 Aligned_cols=120 Identities=19% Similarity=0.208 Sum_probs=88.8
Q ss_pred HHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCCCCCC
Q 037690 24 RWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGERDPE 103 (192)
Q Consensus 24 r~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~ 103 (192)
..-+...+.++|||+++ +|.|.+-+|.+.+ .+.+| ++|+....+.|++||.+||+|+|++.+...
T Consensus 50 ~~~~~~~~~~~LATvd~--dG~P~~R~v~l~~---~d~~g-l~F~T~~~S~K~~eL~~nP~val~f~~~~~--------- 114 (222)
T 1ty9_A 50 RVGIREPRALALATADS--QGRPSTRIVVISE---ISDAG-VVFSTHAGSQKGRELLHNPWASGVLYWRET--------- 114 (222)
T ss_dssp HHTCSSTTEEEEEEECT--TCCEEEEEEECCE---ECSSE-EEEEEETTSHHHHHHHHCCEEEEEEEETTT---------
T ss_pred HhccCCCCEEEEEEECC--CCCEEEEEEEEEE---EcCCE-EEEEECCCCcchHHHhhCCeEEEEEEcCCC---------
Confidence 33466778999999998 5999999999851 24444 999999999999999999999999988652
Q ss_pred CCCcceEEEEEEEEEecCCcHHHHHHHHHHHHh--------------------------CCCC----cCCCCCCCeEEEE
Q 037690 104 NPACAKITLTGKLVLVDVSTKEAEFAEHALFTK--------------------------HPEM----MDWPEDHNFQIFK 153 (192)
Q Consensus 104 ~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~r--------------------------hP~~----~~~~~~~df~~~~ 153 (192)
...|.+.|+|+.+++ ++.+ +.|..+ ++.. ......+.+..|+
T Consensus 115 ---~rqvrI~G~ae~v~~--~~~~---~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~~~~~p~p~~w~~~r 186 (222)
T 1ty9_A 115 ---SQQIILNGQAVRLPN--AKAD---DAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFE 186 (222)
T ss_dssp ---TEEEEEEEEEEECCH--HHHH---HHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTSCSCCCCCTTEEEEE
T ss_pred ---CeEEEEEEEEEEEcc--HHhH---HHHHhCccccccceeeccCCCcCCChHHHHHHHHHHhhccCCCCCCCCEEEEE
Confidence 257999999999973 3322 222211 0000 1123346899999
Q ss_pred EEEeEEEEeccCC
Q 037690 154 LEIEDIFLINWFG 166 (192)
Q Consensus 154 l~~~~~~~v~GFG 166 (192)
|.|+++.|..|-.
T Consensus 187 v~P~~vEfwq~~~ 199 (222)
T 1ty9_A 187 LRLESLEFWGNGQ 199 (222)
T ss_dssp EEEEEEEEEEEEE
T ss_pred EEeeEEEEEECCC
Confidence 9999999988754
No 40
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=99.23 E-value=4.5e-10 Score=88.83 Aligned_cols=140 Identities=15% Similarity=0.094 Sum_probs=97.8
Q ss_pred CCCCCchHHHHHHHHH-Hhh--CCEEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecCChhhHhhhcCCCeE
Q 037690 11 SKKPHPNDAAAFARWL-VSQ--NYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTARNALRDKRSS 86 (192)
Q Consensus 11 ~~~p~~~~~a~~ar~L-l~~--~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~s~h~~Nl~~np~vS 86 (192)
+..|+.....++|..- +.. .+.++|||+++ +|.|.+.+|.+-+ .+.+ +.++|+....+.|++||.+||+|+
T Consensus 2 ~~~~~w~~wl~~a~~~~~~~p~~~~~~LATv~~--dG~P~~R~v~~~~---~d~~~~~l~F~T~~~S~K~~~l~~np~v~ 76 (195)
T 2i51_A 2 MSLAPWRGAIAHALHRNRSLVYARYLQLATVQP--NGRPANRTLVFRG---FLEDTNQLRFITDTRSAKADQIQQQPWAE 76 (195)
T ss_dssp CCCCTTHHHHHHHHHHTTTCGGGGEEEEEEECT--TSCEEEEEEECCC---BCTTSSCEEEEEETTSHHHHHHHHCCEEE
T ss_pred CchhHHHHHHHHHHHhCCCCCCCCEEEEEEECC--CCCeeEEEEEEEE---EcCCCCeEEEEEcCCccHHHHHhhCCeEE
Confidence 4566776666666532 222 45899999998 6999999998851 2433 579999999999999999999999
Q ss_pred EEEeeCCCCCCCCCCCCCCCcceEEEEEEEEEecCCcHH--HHHHHHHHHHhCCC-------------------------
Q 037690 87 LAISEYPLGTCGERDPENPACAKITLTGKLVLVDVSTKE--AEFAEHALFTKHPE------------------------- 139 (192)
Q Consensus 87 l~v~~~~~~~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e--~~~~~~~~~~rhP~------------------------- 139 (192)
|++..... ...|.+.|+|+.+.++..+ +...+..|....|.
T Consensus 77 l~f~~~~~------------~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg~~~~~~~~~~~~~ 144 (195)
T 2i51_A 77 ICWYFPNT------------REQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESGAFEPS 144 (195)
T ss_dssp EEEEETTT------------TEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTTSBCCCCGGGGCCC
T ss_pred EEEEeCCC------------CEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCCCCccchhHHhhhh
Confidence 99988652 2479999999999864321 11222233222210
Q ss_pred -CcCCCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 140 -MMDWPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 140 -~~~~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
.......+.|..|+|.|+++.+..|-..
T Consensus 145 ~~~~~p~p~~w~~~~v~P~~iefwq~~~~ 173 (195)
T 2i51_A 145 PPDPIEPVPNFCLLLLDPVQVDHLELRGE 173 (195)
T ss_dssp CCCSSSCCTTEEEEEEEEEEEEEEESSSS
T ss_pred ccCCCCCCCceEEEEEEccEEEEEecCCC
Confidence 0011223689999999999999987554
No 41
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=99.19 E-value=7.3e-11 Score=91.92 Aligned_cols=119 Identities=12% Similarity=0.066 Sum_probs=84.3
Q ss_pred CCEEEEEeecCCCCCCeeeeEeccccCCCCC-CCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCCCCCCCCCcc
Q 037690 30 NYWGVLNTISSDLGGAPFGNVVSFSDGLPNE-GSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGERDPENPACA 108 (192)
Q Consensus 30 ~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~-~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~~~~~~ 108 (192)
++.++|||+++ +| |.+-+|.+.+ .+ .++.++|+....+.|.+||.+||+|+|++.+.+. ..
T Consensus 29 ~~~~~LATv~~--dG-P~~R~v~~~~---~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~~------------~~ 90 (175)
T 2ou5_A 29 ARHPTLATIGT--DG-PDLRTLVLRA---ASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPKA------------SL 90 (175)
T ss_dssp GGSCEEEEEET--TE-EEEEECCCCE---EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGGG------------TE
T ss_pred cceEEEEEeCC--CC-CceeEEEEEE---EEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCCC------------CE
Confidence 48999999998 59 9998887641 23 3478999999999999999999999999988652 24
Q ss_pred eEEEEEEEEEecCCcHHHHHH----HHHHHHhCCCCcC-----CCCCCCeEEEEEEEeEEEEeccCCC
Q 037690 109 KITLTGKLVLVDVSTKEAEFA----EHALFTKHPEMMD-----WPEDHNFQIFKLEIEDIFLINWFGG 167 (192)
Q Consensus 109 rvtl~G~~~~i~~~~~e~~~~----~~~~~~rhP~~~~-----~~~~~df~~~~l~~~~~~~v~GFG~ 167 (192)
.+.+.|+++.+.++++-+... +..|....|. .. ....++|.+|+|.|+++.|.+|=+.
T Consensus 91 qvri~G~a~~~~d~~~~w~~~~~~~~~~~~~~~~~-~~~~~~l~~~p~~~~~~~v~p~~vefw~~~~~ 157 (175)
T 2ou5_A 91 QVRAKAIAKILPGDPNLFAQLPEAARMNYQGPVPG-TPLPAEPDATPNRFTRLICHLSEIDVLHLTTP 157 (175)
T ss_dssp EEEEEEEEEEEECCHHHHHHSCHHHHGGGSSSCTT-CBSSCCCCCCSCCEEEEEEEEEEEEEEECCSS
T ss_pred EEEEEEEEEEeCcHHHHHHHCCHhHHhcccCCCCC-CccccccCCCCCcEEEEEEEeeEEEEEeCCCC
Confidence 688999999998741111111 0111111111 11 1123689999999999999986554
No 42
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.14 E-value=5.7e-10 Score=91.25 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=92.4
Q ss_pred HhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCCCCCCCCCC
Q 037690 27 VSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCGERDPENPA 106 (192)
Q Consensus 27 l~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~~~~ 106 (192)
+...+.++|||++ + |.|.+-+|.+-+ .+.+| ++|++...+.|+++|.+||+|+|++.+...
T Consensus 77 ~~e~~~~~LATvd-d--G~P~~R~Vllk~---~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~------------ 137 (246)
T 2a2j_A 77 VSEPNAMVLATVA-D--GKPVTRSVLCKI---LDESG-VAFFTSYTSAKGEQLAVTPYASATFPWYQL------------ 137 (246)
T ss_dssp CSSTTEEEEEEEE-T--TEEEEEEEEEEE---EETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG------------
T ss_pred CCCCceEEEEEcC-C--CceEEEEEEEEE---EcCCE-EEEEEcCCChhhHHHhhCCeEEEEEEeCCC------------
Confidence 4567899999999 4 999999998841 34444 999999999999999999999999998752
Q ss_pred cceEEEEEEEEEecCC----------------------------cHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeE
Q 037690 107 CAKITLTGKLVLVDVS----------------------------TKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIED 158 (192)
Q Consensus 107 ~~rvtl~G~~~~i~~~----------------------------~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~ 158 (192)
...|.|.|+|+.++++ .++.+...+.+.++||+.+.....+.+..|+|.|++
T Consensus 138 ~rqVrI~G~ae~v~~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~~vp~pp~w~g~rv~P~~ 217 (246)
T 2a2j_A 138 GRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGWGGYRIAPEI 217 (246)
T ss_dssp TEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTEEEEEECCSE
T ss_pred CEEEEEEEEEEEeccHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCCCCCCCCcEEEEEEEcCE
Confidence 2579999999999531 112223334455566654345566789999999999
Q ss_pred EEEeccCC
Q 037690 159 IFLINWFG 166 (192)
Q Consensus 159 ~~~v~GFG 166 (192)
+.|..|=+
T Consensus 218 iEfWqg~~ 225 (246)
T 2a2j_A 218 VEFWQGRE 225 (246)
T ss_dssp EEEEECCT
T ss_pred EEEccCCC
Confidence 99998643
No 43
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.84 E-value=1e-07 Score=71.96 Aligned_cols=126 Identities=13% Similarity=-0.027 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHhh-CCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCC
Q 037690 17 NDAAAFARWLVSQ-NYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLG 95 (192)
Q Consensus 17 ~~~a~~ar~Ll~~-~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~ 95 (192)
.+..+.+|+|++. .-.|+|||.+. +|.|=++++..+. .-.++.+.|.-.....+.+||++||+|++++...+.
T Consensus 16 ~~~~~~~r~l~~~~v~~~~LATAdk--dG~PNVa~~~~~~---~~Dd~tI~iad~f~~kT~~NL~eNP~aav~~~~~~~- 89 (148)
T 3in6_A 16 RELLEKARSLINANYISTTLSTVDR--NYEVNIAVISVLE---MIGDDTIICARFGADKTYANLKETGKGVFMVLLTDN- 89 (148)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEECT--TCCEEEEECCCEE---EETTTEEEEEESSCHHHHHHHHHHCEEEEEEEEESS-
T ss_pred HHHHHHHHHHHhCCcceEEEEEcCC--CCCccEEEEeeeE---EecCCEEEEEeccchhHHHHHHhCCcEEEEEEEcCC-
Confidence 3567889999987 56999999998 6999999988431 112455555556777889999999999999984432
Q ss_pred CCCCCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHH-hCCCCcCCCCCCCeEEEEEEEeEEEEe
Q 037690 96 TCGERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFT-KHPEMMDWPEDHNFQIFKLEIEDIFLI 162 (192)
Q Consensus 96 ~~~~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~-rhP~~~~~~~~~df~~~~l~~~~~~~v 162 (192)
+. ..+...+.++...+..+.+.++.+++.... ..+. .+.. .+..++|++++-|
T Consensus 90 ------~~--~~KG~Rl~l~~~e~~t~G~~fe~mk~~l~~~~~~~----fp~K--~~~V~kI~~I~pv 143 (148)
T 3in6_A 90 ------DK--SKDGIRVYVELSADLQEGEYFDRIKKRLDNTTYKN----FPLK--NCLVFKIVKILPV 143 (148)
T ss_dssp ------SC--EEEEEEEEEEEEEEESSSHHHHHHHHHHHTSGGGG----SCCC--EEEEEEEEEEECS
T ss_pred ------CC--ccceEEEEEEEEEEecCcHhHHHHHHHHhhhcccC----CCcc--eeEEEEEEEEEeh
Confidence 11 246666777777777777888888777665 2111 1222 3444777777654
No 44
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=98.69 E-value=1.9e-07 Score=68.48 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=86.4
Q ss_pred HHHHHHHhhCCEEEEEeecCCCCCCeeeeE--eccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCCCCCC
Q 037690 21 AFARWLVSQNYWGVLNTISSDLGGAPFGNV--VSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPLGTCG 98 (192)
Q Consensus 21 ~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~--v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~~~~~ 98 (192)
++..++|+....+.|||++ +|.|...+ ..|.. ...+.++++....+.++.+||++||+|++++...+.. +
T Consensus 4 e~~~e~l~~~~~~~iaT~~---~g~Pnvvptw~~~~~---v~dD~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~--g 75 (122)
T 3a6r_A 4 GTFFEVLKNQGVVAIATQG---EDGPHLVNTWNSYLK---VLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVA--G 75 (122)
T ss_dssp HHHHHHTTSCCEEEEEEEC---SSSEEEEEEEGGGCE---EETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEE--C
T ss_pred HHHHHHHhcCCeEEEEEcC---CCCCcEEeeeceEEE---EecCCEEEEEccccHHHHHHHhhCCeEEEEEEecccc--c
Confidence 5678888888899999998 39999977 67761 3346789999999999999999999999999877520 1
Q ss_pred CCCCCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCCCCeEEEEEEEeEEEE
Q 037690 99 ERDPENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPEDHNFQIFKLEIEDIFL 161 (192)
Q Consensus 99 ~~dp~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~~df~~~~l~~~~~~~ 161 (192)
... ......+.|+++.+.+ .++++.+ .++|- --+.+.|+|++++-
T Consensus 76 ~~g----~~~gf~ikGta~~~~~-G~~fd~~-----~k~~~--------~k~vlvi~i~~i~q 120 (122)
T 3a6r_A 76 RNG----PGTGFLIRGSAAFRTD-GPEFEAI-----ARFKW--------ARAALVITVVSAEQ 120 (122)
T ss_dssp SSS----EEEEEEEEEEEEEESS-SHHHHTT-----TTSTT--------CSEEEEEEEEEEEE
T ss_pred ccC----CCceEEEEEEEEEEec-cHHHHHH-----hccCc--------ccEEEEEEEEEEEE
Confidence 111 2367999999999987 4555544 23322 33677999999874
No 45
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=98.27 E-value=7e-06 Score=60.07 Aligned_cols=101 Identities=17% Similarity=0.065 Sum_probs=74.0
Q ss_pred hCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecC-----ChhhHhhhcCCCeEEEEeeCCCCCCCCCCCC
Q 037690 29 QNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTL-----DPTARNALRDKRSSLAISEYPLGTCGERDPE 103 (192)
Q Consensus 29 ~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~-----s~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~ 103 (192)
....+.|.|.+.. +|.|+.+++.|+ .+ ++.+++..|.- ..-++||++||+|+|.+..
T Consensus 14 g~p~~~Ltt~GRk-SG~pr~tPv~~~----~~-g~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~~------------ 75 (122)
T 3r5l_A 14 KIPVALLTTTGRK-TGQPRVNPLYFL----RD-GGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKK------------ 75 (122)
T ss_dssp SCCCEEEEEECTT-TCSEEEEEEEEE----EE-TTEEEEECSCCGGGCSCHHHHHHHHCCEEEEEETT------------
T ss_pred CCcEEEEEEcCCC-CCCEEEEEEEEE----EE-CCEEEEEEecCCCCCCCHHHHhhccCCcEEEEECC------------
Confidence 4678999999986 799999999998 44 45666655642 2449999999999997621
Q ss_pred CCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCCC--CCeEEEEEE
Q 037690 104 NPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPED--HNFQIFKLE 155 (192)
Q Consensus 104 ~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~~--~df~~~~l~ 155 (192)
. +..+++++++ ++|.+.+.+.+.+++|....|-.. -.+-+|+|+
T Consensus 76 ----~--~~~~~A~~l~--~~Er~~~~~~~~~~~p~y~~yq~~t~R~ipv~~L~ 121 (122)
T 3r5l_A 76 ----E--VLDLTARDAT--DEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCE 121 (122)
T ss_dssp ----E--EEEEEEEECC--HHHHHHHHHHHHHHCTTCCCTTGGGCTTSCEEEEE
T ss_pred ----E--EEEEEEEECC--cchHHHHHHHHHHHCcCHHHHHhhcCCcccEEEEe
Confidence 1 3567788886 568899999999999986655432 344455554
No 46
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=97.71 E-value=0.00013 Score=54.78 Aligned_cols=100 Identities=12% Similarity=-0.026 Sum_probs=72.6
Q ss_pred CEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCC-----hhhHhhhcCCCeEEEEeeCCCCCCCCCCCCCC
Q 037690 31 YWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLD-----PTARNALRDKRSSLAISEYPLGTCGERDPENP 105 (192)
Q Consensus 31 ~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s-----~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~~~ 105 (192)
..+.|.|.+.. .|.|+.+++.|. .+ +|..|+..|..+ .=++||++||+|.+.+...
T Consensus 38 p~~lLtt~GRk-SG~~r~tPl~~~----~~-~~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~~------------- 98 (145)
T 3r5z_A 38 PVVVLTTKGAK-TGKLRKTPLMRV----EH-NGEYAVVASLGGAPKHPVWYHNIKAEPHVELRDGTE------------- 98 (145)
T ss_dssp EEEEEEEECTT-TCCEEEEEEECE----EE-TTEEEEECCBTTBSSCCHHHHHHHHCCEEEEEETTE-------------
T ss_pred eEEEEEEcCCC-CCCEEEEEEEEE----EE-CCEEEEEEcCCCCCCCChHHHHhhhCCcEEEEECCE-------------
Confidence 46889999876 799999999998 33 567777777653 3499999999998875221
Q ss_pred CcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCC--CCCeEEEEEEE
Q 037690 106 ACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPE--DHNFQIFKLEI 156 (192)
Q Consensus 106 ~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~--~~df~~~~l~~ 156 (192)
+..+++++++ ++|.+.+-+.+.+++|....|-. .-..-+|+|.+
T Consensus 99 -----~~~~~Ar~~~--~~Er~~~w~~~~~~~p~y~~Yq~~t~R~iPv~~L~p 144 (145)
T 3r5z_A 99 -----VGDYTAREVT--GEEKRVWWERAVEVWPDYAEYQTKTTREIPVFVLTP 144 (145)
T ss_dssp -----EEEEEEEECC--HHHHHHHHHHHHHHCTHHHHHGGGCSSCCCEEEEEE
T ss_pred -----EEEEEEEECC--chHHHHHHHHHHHHCcCHHHHHHhcCCcCceEEEEe
Confidence 3456677787 46888999999999987443332 23555666654
No 47
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=97.58 E-value=0.00051 Score=51.42 Aligned_cols=103 Identities=9% Similarity=0.116 Sum_probs=74.6
Q ss_pred hCCEEEEEeecCCCCCCeeeeEeccccCCCCCCC--CceEEEEecC-----ChhhHhhhcCCCeEEEEeeCCCCCCCCCC
Q 037690 29 QNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS--GVPYFYLTTL-----DPTARNALRDKRSSLAISEYPLGTCGERD 101 (192)
Q Consensus 29 ~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~--g~~~~~~s~~-----s~h~~Nl~~np~vSl~v~~~~~~~~~~~d 101 (192)
....+.|-|.+.. .|.|+.+++.|. .++. +.+++..|.- ..-++||++||+|++.+..
T Consensus 29 g~~~llLtt~GRk-SG~~r~tPl~~~----~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g~---------- 93 (143)
T 3h96_A 29 GAPMVLVHHVGRK-TGKAAVTPMMYL----PSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVGT---------- 93 (143)
T ss_dssp TSCEEEEEEECTT-TCCEEEEEEECE----ECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEETT----------
T ss_pred CCcEEEEEEcCCC-CCCEEEEEEEEE----EecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEECC----------
Confidence 4578899999986 799999999998 4431 6666666653 3559999999999887521
Q ss_pred CCCCCcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCC---CC-CCeEEEEEEE
Q 037690 102 PENPACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWP---ED-HNFQIFKLEI 156 (192)
Q Consensus 102 p~~~~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~---~~-~df~~~~l~~ 156 (192)
. +..+++++++ ++|.+.+...|.+++|....|- ++ -..-+|+|.+
T Consensus 94 ------~--~~~~~A~~~~--~~Er~~~~~~~~~~~P~y~~Yq~~t~~~R~iPv~~L~p 142 (143)
T 3h96_A 94 ------E--TYAVGVTEVT--GEDRDRIYSEQARRYPGFADYEKKTAGIRTIPVLALTR 142 (143)
T ss_dssp ------E--EEEEEEEEEC--HHHHHHHHHHHHHHCTHHHHHHHHTTTTCCCCEEEEEE
T ss_pred ------E--EEEEEEEecC--chHHHHHHHHHHHHCcCHHHHHHhcCCCCcccEEEEee
Confidence 1 3567777887 4688999999999999743332 21 3556666654
No 48
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=97.56 E-value=0.0004 Score=52.26 Aligned_cols=100 Identities=15% Similarity=0.032 Sum_probs=71.9
Q ss_pred CEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCC-----hhhHhhhcCCCeEEEEeeCCCCCCCCCCCCCC
Q 037690 31 YWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLD-----PTARNALRDKRSSLAISEYPLGTCGERDPENP 105 (192)
Q Consensus 31 ~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s-----~h~~Nl~~np~vSl~v~~~~~~~~~~~dp~~~ 105 (192)
..+.|.|.+.. .|.|+.+++.|. . .+|..|+..|.-. .-++||++||+|++.+..
T Consensus 40 p~~lLtt~GRk-SG~~r~tPl~~~----~-~~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~-------------- 99 (147)
T 3r5y_A 40 PLVILTTVGRK-TGALRKTPVMRV----E-HDGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDKD-------------- 99 (147)
T ss_dssp EEEEEEEECTT-TCCEEEEEEECC----E-ETTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEETT--------------
T ss_pred cEEEEEEcCCC-CCCEEEEEEEEE----E-ECCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEECC--------------
Confidence 46889999876 799999999998 3 3567777766642 559999999999886521
Q ss_pred CcceEEEEEEEEEecCCcHHHHHHHHHHHHhCCCCcCCCC--CCCeEEEEEEE
Q 037690 106 ACAKITLTGKLVLVDVSTKEAEFAEHALFTKHPEMMDWPE--DHNFQIFKLEI 156 (192)
Q Consensus 106 ~~~rvtl~G~~~~i~~~~~e~~~~~~~~~~rhP~~~~~~~--~~df~~~~l~~ 156 (192)
-+..+++++++ ++|.+.+-+.+.+++|....|-. .-.+-+|+|++
T Consensus 100 ----~~~~~~Ar~~~--~~Er~~~w~~~~~~~P~y~~Yq~~t~R~IPv~~L~p 146 (147)
T 3r5y_A 100 ----AVLSVVARELA--GPERAEWWERAVRAYPTYQEYQDNTRRLIPVLLLEP 146 (147)
T ss_dssp ----EEEEEEEEECC--HHHHHHHHHHHHHHCTHHHHHHHTCSSCCCEEEEEE
T ss_pred ----EEEEEEEEECC--chHHHHHHHHHHHHCCCHHHHHhhcCCcCcEEEEeC
Confidence 13567788887 46888999999999987433322 23445555544
No 49
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=80.60 E-value=2.8 Score=33.34 Aligned_cols=55 Identities=15% Similarity=0.089 Sum_probs=42.2
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCC-ceEEEEecCChhhHhhhcCCCeEEEEeeCC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSG-VPYFYLTTLDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g-~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
-.+++|.+. +|.+-..++.|. ..++ .+++.+.+.+.+++||++.+.+.+-|.++.
T Consensus 37 e~vVtT~~~--dG~~NlAP~s~~-----~~~~~~~~i~i~~~k~T~~NI~~tgefVVNi~~d~ 92 (233)
T 2ptf_A 37 ETIVVTWDD--SMVGNAAPIGVL-----CTGDDTVTLYLYQGTRTVENVLNNGRFTVNVTLDP 92 (233)
T ss_dssp EEEEEEECT--TCCEEEEEEEEE-----ECSSSEEEEEEETTCHHHHHHHHHSEEEEEECCCH
T ss_pred EEEEEEeCC--CCCEeeccEEEE-----EcCCCCEEEEEcCCChHHHHHHhCCEEEEEECCHH
Confidence 456888887 699988888887 2344 455555667789999999999999998744
No 50
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=73.12 E-value=4.7 Score=30.48 Aligned_cols=70 Identities=11% Similarity=0.032 Sum_probs=48.4
Q ss_pred HHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 21 AFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 21 ~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
+.++.+|.-.-.++++|.+. +|.|.+.++++.- + ...+ -.+.+.+.+.+...+||++++..++.|-..+.
T Consensus 9 ~~~~~~l~p~pV~vVTt~~~--~g~~n~~t~s~~~-~-vs~~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~~~~ 79 (186)
T 3e4v_A 9 ENAYRILESGPIVLVSTRGA--DGRANLMTMGFHM-M-MQHEPPLVGAIIGPWDYSHQALSETGECVLAVPTVDL 79 (186)
T ss_dssp GGGHHHHTTCCCEEEEEECT--TSCEEEEEECCEE-E-EETTTTEEEEECCTTSTHHHHHHHHCEEEEEECCGGG
T ss_pred HHhccccCCCceEEEEEeCC--CCceEEEEhhhhh-h-hcCCCCEEEEEEcChhHHHHHHHHCCeEEEEeCCHHH
Confidence 44677887777899999776 5888776666530 0 1111 13445556777889999999999999877653
No 51
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=71.42 E-value=6.7 Score=30.28 Aligned_cols=54 Identities=11% Similarity=-0.106 Sum_probs=39.6
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCC-ceEEEE-ecCChhhHhhhcCCCeEEEEeeC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSG-VPYFYL-TTLDPTARNALRDKRSSLAISEY 92 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g-~~~~~~-s~~s~h~~Nl~~np~vSl~v~~~ 92 (192)
...++|.++ +|.+-..+++|. .. +. .+.+.+ .+.+.+++||++.+...+-|.++
T Consensus 16 ev~VtT~~~--~G~~N~AP~s~~----~~-~~~~~~v~~~~~~k~T~~NI~~~gefVvNi~~d 71 (199)
T 2iml_A 16 EIIAITENE--DGSWNAAPIGII----VE-DSSSDTAKAKLYRNRTRANLERSGVLFANVTDD 71 (199)
T ss_dssp EEEEEEECT--TSCEEEEEEEEE----ES-CTTSSEEEEECCSSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEEcCC--CCCEEeccEEEE----Ec-CCCCEEEEEcCCCChHHHHHHHCCEEEEEECCH
Confidence 356788887 598888888776 22 22 356666 55678899999999999988754
No 52
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=65.76 E-value=8.5 Score=29.95 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEY 92 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~ 92 (192)
..++.|.+. + .|-..++... . .++.+.+.+-+.+.+++||++++.+.+-|.++
T Consensus 31 ~~vI~Tt~~--~-~~N~APiG~~----~-~~~~v~i~~~~~s~T~eNI~~~~~fvvNv~~D 83 (213)
T 2nr4_A 31 SEIIASTGF--E-HPNAAPIGIV----M-KGERPFVRLFKGSHTWENVLKEKCLASNVVYD 83 (213)
T ss_dssp EEEEEEECS--S-SCEEEEEEEE----E-SSSSCEEEEETTSHHHHHHHHHCEEEEECCCC
T ss_pred eEEEEEecC--C-CccccceEEE----E-eCCEEEEEECCCCchHHHHhhCCEEEEEeCCC
Confidence 366777764 5 7777777766 3 24478888899999999999999999988764
No 53
>3bpk_A Nitrilotriacetate monooxygenase component B; structural genomics, APC25244, PSI-2, protein structure initiative; 1.56A {Bacillus cereus atcc 14579}
Probab=63.96 E-value=15 Score=27.97 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhh---CCEEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecC----ChhhHhhhcCCCeEEEE
Q 037690 18 DAAAFARWLVSQ---NYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTL----DPTARNALRDKRSSLAI 89 (192)
Q Consensus 18 ~~a~~ar~Ll~~---~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~----s~h~~Nl~~np~vSl~v 89 (192)
+..+.-|.++.. .-.++++|.+. +|.|.+.++++.- + ...+ -.+.+.+.+. +...+||++....++.|
T Consensus 13 ~~~~~~r~~~~~~~p~pV~vVtt~~~--~g~~n~~t~s~~~-~-vs~~Pp~v~v~i~~~~~~~~~T~~~i~~~~~F~Vni 88 (206)
T 3bpk_A 13 TEKDNYKLLTGSIIPRPVAFVTSVTK--EGVLNGAPYSYFN-I-VAANPPLISVSVQRKAGERKDTSRNAIEKGEFVVHI 88 (206)
T ss_dssp CHHHHHHHHHHHSCCEECEEEEEECT--TCCEEEEEESSEE-E-EETTTTEEEEEEECBTTBCCHHHHHHHHHSEEEEEE
T ss_pred ChhHhhHHhhCcccCcccEEEEEeCC--CCCEEEEEeeeee-c-ccCCCCEEEEEEcCCCCChhHHHHHHHHCCeEEEEe
Confidence 344555555543 45678888876 4777777776540 0 1111 2344555555 78899999999999998
Q ss_pred eeCCC
Q 037690 90 SEYPL 94 (192)
Q Consensus 90 ~~~~~ 94 (192)
...+.
T Consensus 89 l~~~~ 93 (206)
T 3bpk_A 89 SDESY 93 (206)
T ss_dssp CBTTT
T ss_pred CCHHH
Confidence 87654
No 54
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=56.60 E-value=6.1 Score=29.93 Aligned_cols=69 Identities=17% Similarity=0.098 Sum_probs=46.8
Q ss_pred HHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCC
Q 037690 22 FARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 22 ~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
..|.+|.-...++++|.+. +|.|.+.++++.-.--.+ .-.+.+.+.+.+...+||+++...++.|...+
T Consensus 19 ~~~~~l~p~~V~vVTt~~~--~g~~n~~t~s~~~~vs~~-Pp~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~~ 87 (192)
T 1eje_A 19 SAHRILTPRPTVMVTTVDE--EGNINAAPFSFTMPVSID-PPVVAFASAPDHHTARNIESTHEFVINITPAD 87 (192)
T ss_dssp GGGGTSCCEECEEEEEECT--TCCEEEEEECSEEEEETT-TTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred HheeeccCcceEEEEEECC--CCCeEEEEhhccchhcCC-CCEEEEEECCchHHHHHHHHCCcEEEEeCCHH
Confidence 3466666555778888876 477777777754100011 12456666777899999999999999987764
No 55
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=53.70 E-value=18 Score=27.89 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=36.3
Q ss_pred EEEEeecCCCCCC----eeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeC
Q 037690 33 GVLNTISSDLGGA----PFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEY 92 (192)
Q Consensus 33 ~~LAT~~~~~~G~----P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~ 92 (192)
.+++|.+. +|. |++..++.+- + +..+..+.+.+.+.+.+++||++++...+-|..+
T Consensus 7 ~vVTT~~~--~G~~N~AP~g~~~~~~~-S-vs~~P~v~v~i~~~s~T~~Ni~~~g~fvVNi~~~ 66 (205)
T 3b5m_A 7 SLVTTLDE--QGRINLAPLGPIVLPPQ-S-PGGLPQFLLRPYEGSTTCDNLLASGNAVIHVIDD 66 (205)
T ss_dssp EEEEEECT--TCCEEEEEECCEEECCS-S-TTCCCEEEECCCTTSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEcCC--CCCEeecceEEEEeccc-c-ccCCCcEEEEECCCCchHHHHHHCCEEEEEECCH
Confidence 57888887 464 7776665420 0 0122333344455678899999999999998864
No 56
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=52.53 E-value=17 Score=27.69 Aligned_cols=69 Identities=9% Similarity=-0.003 Sum_probs=44.3
Q ss_pred HHHHHHhh----CCEEEEEeecCCCCCCeeeeEeccccCCCCCCCC-ceEEEEec---CChhhHhhhcCCCeEEEEeeCC
Q 037690 22 FARWLVSQ----NYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSG-VPYFYLTT---LDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 22 ~ar~Ll~~----~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g-~~~~~~s~---~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
..-.||.+ .-.++++|.+. +|.|-+.++++.- + +..+- .+.+.+.+ .+...+||+++...++.|...+
T Consensus 16 ~~y~ll~~~~~P~pV~vVtt~~~--~G~~n~~t~s~~~-~-vs~~PPlv~v~i~~~~~~~~T~~~i~~~g~F~Vnvl~~~ 91 (203)
T 3fge_A 16 TRAHFINSLSGFKSANLIGTQDR--QGNTNLSIVSSVI-H-LGANPPLMGMIIRPHSVPRHTFENIMQTGLYTINHVNQS 91 (203)
T ss_dssp HHHHHHHHTTCCEECEEEEEECT--TCCEEEEEESCCE-E-EEETTEEEEEEECC---CHHHHHHHHHHCEEEEEECBTT
T ss_pred HHHHHHhcccCccccEEEEEeCC--CCceeEEEeeeee-h-hcCCCCEEEEEeCCCCCccHHHHHHHHCCcEEEEECCHH
Confidence 34456654 45889999877 5888877777640 0 11111 12333444 5677999999999999987765
Q ss_pred C
Q 037690 94 L 94 (192)
Q Consensus 94 ~ 94 (192)
.
T Consensus 92 ~ 92 (203)
T 3fge_A 92 I 92 (203)
T ss_dssp T
T ss_pred H
Confidence 4
No 57
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=49.75 E-value=17 Score=26.37 Aligned_cols=68 Identities=10% Similarity=-0.055 Sum_probs=44.3
Q ss_pred HHHHHhhC--CEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 23 ARWLVSQN--YWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 23 ar~Ll~~~--~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
-|..+..- ..++++|.+ +|.|.+.++++.-. .....-.+.+.+.+.+...+||++++..++.|-..+.
T Consensus 6 ~r~a~~~~~~~V~vVtt~~---~g~~n~~t~s~~~~-vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~~ 75 (159)
T 1yoa_A 6 KKKVLRSFTYGLYVLTAKD---GDEVAAGTVNWVTQ-ASFQPPLVAVGLKRDSHLHALVERTGKLALMTLAHDQ 75 (159)
T ss_dssp HHHHHTTCCCBCEEEEEEE---TTEEEEEEECCEEE-EETTTTEEEEEEESSSHHHHHHHHHCEEEEEECBTTC
T ss_pred HHHHHHcCCCccEEEEEcc---CCEEEEEEEeeeee-eEcCCCEEEEEECCCCchHHHHHhCCeEEEEECchhH
Confidence 44444433 356777755 47777776665410 0111234667777888999999999999999988753
No 58
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=45.74 E-value=29 Score=26.04 Aligned_cols=71 Identities=10% Similarity=0.004 Sum_probs=45.2
Q ss_pred HHHHHHHHhhCCEE-EEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 20 AAFARWLVSQNYWG-VLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 20 a~~ar~Ll~~~~~~-~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
....|..+..-..+ +++|.+ +|.|.+-++++.-.--.++ -.+.|.+.+.+...+||++..+.++.|-..+.
T Consensus 20 ~~~fr~a~~~~~~gVvVTt~~---~g~~~g~t~ss~~svS~~P-Plv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~~ 91 (185)
T 4hx6_A 20 RVQLRRVFGDFPTGVTVVTVG---GSEPRGMTANSFTSVSLSP-PLVLICVGKDAVMHQRLTALPTFAVSVLEAGQ 91 (185)
T ss_dssp HHHHHHHHTTSCBCCEEEEEC---SSSCEEEEESCCEEEETTT-TEEEEEEETTSHHHHHHHHSCEEEEEECBTTC
T ss_pred HHHHHHHHhhCCCcEEEEEcC---CCEEEEEEEeeEeeeECCC-CEEEEEECCCcHHHHHHHHCCeEEEEECCHHH
Confidence 34455555544333 566655 4777777766541000122 24666777888999999999999999987654
No 59
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=44.00 E-value=81 Score=25.92 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=48.5
Q ss_pred HHHHHHHHhhCCEE--EEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 20 AAFARWLVSQNYWG--VLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 20 a~~ar~Ll~~~~~~--~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.+.-|..|..-..+ +++|.+. +|.|.+.+++++-.--.++ -.+.+.+.+.+...+||+++...++.|-..+.
T Consensus 18 ~~~fr~am~~~~~gV~vVTt~~~--~G~~ngmt~ss~~svS~~P-Plv~v~i~~~s~T~~~i~~sg~F~VnvL~~~q 91 (321)
T 3rh7_A 18 PRALRDAFGAFATGVTVVTASDA--AGKPIGFTANSFTSVSLDP-PLLLVCLAKSSRNYESMTSAGRFAINVLSETQ 91 (321)
T ss_dssp HHHHHHHHTTSCEECEEEEEECT--TCCEEEEEECCEEEEETTT-TEEEEEEETTCSSHHHHHHCSEEEEEECBTTC
T ss_pred HHHHHHHHHhCCCCeEEEEEEcC--CCCEEEEEecchhhhcCCC-CEEEEEECCcchHHHHHHhCCeEEEEECCHHH
Confidence 34567777666654 6777775 4777776666541000222 24566777888999999999999999987654
No 60
>1rz1_A Phenol 2-hydroxylase component B; flavin, NAD, oxidoreductase; HET: FAD NAD; 2.10A {Geobacillus thermoglucosidasius} SCOP: b.45.1.2 PDB: 1rz0_A*
Probab=43.19 E-value=28 Score=25.29 Aligned_cols=68 Identities=12% Similarity=-0.006 Sum_probs=43.5
Q ss_pred HHHHHhhCC--EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 23 ARWLVSQNY--WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 23 ar~Ll~~~~--~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
-|..+..-. .+++.|.+ +|.|.+.++++.-. .-...-.+.+.+.+.+...+||+++...++.|-..+.
T Consensus 6 ~r~~~~~~~~~V~vVTt~~---~g~~n~~t~s~~~~-vs~~Pp~v~v~i~~~s~T~~~i~~~~~F~Vnvl~~~~ 75 (161)
T 1rz1_A 6 FRNAMGKFATGVTVITTEL---NGAVHGMTANAFMS-VSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQDQ 75 (161)
T ss_dssp HHHHHTTSCBCCEEEEEEE---TTEEEEEEECCEEE-EETTTTEEEEEEETTCHHHHHHHHHCEEEEEECBGGG
T ss_pred HHHHHhcCCCceEEEEEcc---CCEEEEEEEeEEEE-eECCCCEEEEEeCCCCchHHHHhhCCcEEEEECCHHH
Confidence 444444433 45677776 37777766665410 0011234566777888999999999999999977643
No 61
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=42.34 E-value=46 Score=24.13 Aligned_cols=69 Identities=10% Similarity=-0.105 Sum_probs=45.7
Q ss_pred HHHHHHhhCC--EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 22 FARWLVSQNY--WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 22 ~ar~Ll~~~~--~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.-|..|..-. .++++|.+ +|.|.+..+++.-.--.++ -.+.+.+.+.+...+||+++.+.++.|-..+.
T Consensus 6 ~fr~a~~~~p~~V~vVTt~~---~g~~~g~t~s~~~svs~~P-P~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 76 (157)
T 3pft_A 6 SLREAFGHFPSGVIAIAAEV---DGTRVGLAASTFVPVSLEP-PLVAFAVQNSSTTWPKLKDLPSLGISVLGEAH 76 (157)
T ss_dssp HHHHHHHTSCBCCEEEEEEE---TTEEEEEEESCCEEEETTT-TEEEEEEETTCSSHHHHTTSSCEEEEECBTTC
T ss_pred HHHHHHHhCCCceEEEEEee---CCEEEEEEeeeEeEEECCC-cEEEEEECCCCchHHHHHhCCEEEEEECCHHH
Confidence 3455554433 56778876 4778877777641000122 34677777888999999999999999977654
No 62
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=40.37 E-value=60 Score=23.17 Aligned_cols=69 Identities=7% Similarity=-0.130 Sum_probs=44.6
Q ss_pred HHHHHHhhCCE--EEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 22 FARWLVSQNYW--GVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 22 ~ar~Ll~~~~~--~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
..|..|..-.. ++++|.+ +|.|.+.++++.-.--.++ -.+.+.+.+.+...+||+++...++.|-..+.
T Consensus 4 ~~r~a~~~~~~~V~vVtt~~---~g~~ng~t~s~~~~vs~~P-p~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 74 (149)
T 2ecu_A 4 AFKEALARFASGVTVVAARL---GEEERGMTATAFMSLSLEP-PLVALAVSERAKLLPVLEGAGAFTVSLLREGQ 74 (149)
T ss_dssp HHHHHHHTSCEECEEEEEEE---TTEEEEEEESCEEEEETTT-TEEEEEEETTCTHHHHHHHHTEEEEEECBTTC
T ss_pred HHHHHHHhCCCeeEEEEEcc---CCeeEEEEEEeeecccCCC-CEEEEEECCCChhHHHHHhCCEEEEEECcHHH
Confidence 34555555554 4677765 3677776666541000222 34567777888999999999999999977654
No 63
>3hmz_A Flavin reductase domain protein, FMN-binding; FMN-binding domain of flavin reductases-like enzyme, structu genomics; HET: MSE FMN; 1.50A {Shewanella baltica}
Probab=38.15 E-value=9 Score=29.27 Aligned_cols=68 Identities=10% Similarity=-0.050 Sum_probs=44.9
Q ss_pred HHHHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecCChhhHhhhcCCCeEEEEeeCC
Q 037690 21 AFARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 21 ~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
+.+..+|...-.++++| +. +|.|.+.+++++- + ...+ -.+.+.+.+.+...+||++..+.++.|-..+
T Consensus 20 ~~~~~~l~p~pV~vVTt-~~--~g~~ng~t~s~~~-~-vs~~PP~v~v~i~~~~~t~~~i~~~g~F~Vnvl~~~ 88 (199)
T 3hmz_A 20 AKAYRLLNHGPTVLVSA-RS--QGIDNVMAAAWCC-A-LDFAPPKLTVVLDKMTKTREFIEQSGMFVIQVPTVA 88 (199)
T ss_dssp GGGGGGTTTCCCEEEEE-EE--TTEEEEEEESCEE-E-EEETTEEEEEECCTTCHHHHHHHHHSEEEEEECBGG
T ss_pred HHhccccCCCCEEEEEe-CC--CCcceEEEeeeec-e-ecCCCCEEEEEECCcchHHHHHHHCCEEEEEECCHH
Confidence 34556676667888888 44 4778777777640 0 1111 1345555667788999999999999887654
No 64
>2d5m_A Flavoredoxin; flavoprotein, FMN binding, electron transport; HET: FMN MES; 1.05A {Desulfovibrio vulgaris str}
Probab=37.31 E-value=16 Score=27.36 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=38.8
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCC-CceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~-g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.++++|.+. +|.|.+.++++.- + ...+ -.+.+.+.+.+...+||+++...++.|...+.
T Consensus 16 V~vVtt~~~--~g~~n~~t~s~~~-~-vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~~ 75 (190)
T 2d5m_A 16 LFLVGTYDR--DSRPNIMAAAWAG-I-CCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRAY 75 (190)
T ss_dssp CEEEEEECT--TCCEEEEEECSEE-E-EEETTEEEEECCCTTSHHHHHHHHHSEEEEEECBGGG
T ss_pred eEEEEEecC--CCceEEEEeeeee-c-ccCCCCEEEEEEcCchhHHHHHHHCCeEEEEeCCHHH
Confidence 567788765 4788877777640 0 1111 12344445667889999999999998877543
No 65
>1i0r_A Conserved hypothetical protein; six stranded antiparallel beta-barrel, FMN and NADP+ binding domain, oxidoreductase; HET: FMN; 1.50A {Archaeoglobus fulgidus} SCOP: b.45.1.2 PDB: 1i0s_A*
Probab=36.27 E-value=38 Score=24.86 Aligned_cols=59 Identities=12% Similarity=0.056 Sum_probs=39.8
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.++++|.+ +|.|.+.++++.-.--.++ -.+.+.+.+.+...+||+++...++.|-..+.
T Consensus 13 V~vVTt~~---~g~~ng~t~s~~~~vs~~P-P~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 71 (169)
T 1i0r_A 13 LYIVTSES---NGRKCGQIANTVFQLTSKP-VQIAVCLNKENDTHNAVKESGAFGVSVLELET 71 (169)
T ss_dssp CEEEEEEE---TTEEEEEEESCEEEEETTT-TEEEEEEETTSHHHHHHHHHSEEEEEEEBTTC
T ss_pred eEEEEEcc---CCeEEEEEEEEEEEeECCC-CEEEEEECCCchhHHHHHhCCEEEEEeCChhH
Confidence 45777765 3677776666541000222 24566777888899999999999999987765
No 66
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=35.90 E-value=74 Score=22.87 Aligned_cols=70 Identities=6% Similarity=-0.057 Sum_probs=44.9
Q ss_pred HHHHHHHhhCCE--EEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 21 AFARWLVSQNYW--GVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 21 ~~ar~Ll~~~~~--~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
+..|..+..-.. ++++|.+ +|.|.+.++++.-.--.++ -.+.+.+.+.+...+||+++...++.|-..+.
T Consensus 6 ~~~r~a~~~~~~~V~vVtt~~---~g~~ng~t~s~~~~vs~~P-p~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 77 (158)
T 2r0x_A 6 SQFKDAMAQLASAVHIVTTSG---ETGQHGFTASAVCSVTDSP-PTLLVCINSNARAYEHFVKNRVLMVNTLTAEQ 77 (158)
T ss_dssp HHHHHHHHTSCEECEEEEEEC---SSCEEEEEESCEEEEEETT-EEEEEEEETTSTTHHHHHHHCEEEEEECBTTC
T ss_pred HHHHHHHhcCCCceEEEEEcc---CCeEEEEEEeeEeEeECCC-CEEEEEeCCCChHHHHHHhCCEEEEEeCCHHH
Confidence 345666655554 4566765 3777777777651000111 23456667788999999999999998877654
No 67
>3bnk_A Flavoredoxin; protein-FMN complex, electron transport; HET: FMN; 2.05A {Methanosarcina acetivorans}
Probab=32.03 E-value=36 Score=25.64 Aligned_cols=59 Identities=8% Similarity=-0.053 Sum_probs=39.4
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.++++|.. +|.|.+.++++.- +.....-.+.+.+.+.+...+||+++...++.|...+.
T Consensus 18 V~vVTt~~---~g~~n~~t~s~~~-~vs~~PP~v~v~i~~~s~T~~~i~~~~~F~Vnil~~~~ 76 (196)
T 3bnk_A 18 VTLLGANV---KGKANLMALGWVS-RVNANPPMLGVGVNKSHYTPEGIAENGSFSVNFPYSGM 76 (196)
T ss_dssp CEEEEEEE---TTEEEEEEECCEE-EEETTTTEEEEEEETTSSHHHHHHHHTEEEEEECBGGG
T ss_pred EEEEEEec---CCcceEEEeeeee-eeeCCCCEEEEEECCcchHHHHHHHCCeEEEEECCHHH
Confidence 46677763 4777777776540 00011124566777888999999999999999877543
No 68
>2r6v_A Uncharacterized protein PH0856; FMN-binding protein, flavin reductase like DOMA structural genomics, joint center for structural genomics; HET: FMN; 1.25A {Pyrococcus horikoshii}
Probab=31.74 E-value=27 Score=26.32 Aligned_cols=59 Identities=3% Similarity=-0.124 Sum_probs=38.5
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.++++|. . +|.|.+.++++.-. .....-.+.+.+.+.+...+||++++..++.|-..+.
T Consensus 31 V~vVTt~-~--~g~~ng~t~s~~~~-vs~~Pp~v~v~i~~~s~T~~~i~~~g~F~Vnvl~~~~ 89 (191)
T 2r6v_A 31 TYLIVSG-H--GEETNVMAADWVTV-VSFDPFIVGVAVAPKRTTHKLIKKYGEFVISVPSLDV 89 (191)
T ss_dssp CEEEEEC-C--GGGCEEEEECCEEE-EETTTTEEEEEECTTSHHHHHHHHHSEEEEEECBGGG
T ss_pred EEEEEEe-c--CCeeEEEEeeeeee-eeCCCCEEEEEECCCchHHHHHHHCCEEEEEeCCHHH
Confidence 5567776 3 46666666665400 0011234566777788999999999999998877653
No 69
>1usc_A Putative styrene monooxygenase small component; FMN-binding protein, structural genomics, riken structural genomics/proteomics initiative; HET: FMN; 1.24A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1usf_A*
Probab=31.22 E-value=34 Score=25.30 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=38.8
Q ss_pred EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCCC
Q 037690 32 WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYPL 94 (192)
Q Consensus 32 ~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~~ 94 (192)
.++++| +. +|.|-+.++++.-.--.+ .-.+.+.+.+.+...+||+++...++.|-..+.
T Consensus 21 V~vVtt-~~--~g~~n~~t~s~~~~vs~~-Pp~v~v~i~~~~~t~~~i~~~~~F~Vnil~~~~ 79 (178)
T 1usc_A 21 PAVVGV-RV--EERVNFCPAVWNTGLSAD-PPLFGVSISPKRFTHGLLLKARRFSASFHPFGQ 79 (178)
T ss_dssp CEEEEE-EE--TTEEEEEEESSEEEEETT-TTEEEEEECTTSHHHHHHHHHCEEEEEECBGGG
T ss_pred eEEEEE-CC--CCcceEEEEeeeceeeCC-CCEEEEEECCCchHHHHHHHCCeEEEEeCCHHH
Confidence 567777 44 477766666643000022 124566777778889999999999998877554
No 70
>3cb0_A 4-hydroxyphenylacetate 3-monooxygenase; corrin reductase, COBR, six-stranded anti-parallel beta- barrel, oxidoreductase; HET: FMN; 1.60A {Brucella melitensis}
Probab=27.94 E-value=41 Score=24.69 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=42.7
Q ss_pred HHHHHHHhhCC--EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCC
Q 037690 21 AFARWLVSQNY--WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 21 ~~ar~Ll~~~~--~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
+..|..+..-. .++++|.+. |.+.+-.+++.-+.-.++ -.+.+.+.+.+...+||++++..++.|-..+
T Consensus 17 ~~~r~~~~~~~~~V~vVTt~~~---~~~~g~t~ss~~~vs~~P-p~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 87 (173)
T 3cb0_A 17 KAYRDAMSHYAGAVQIVTTAGA---AGRRGLTLTAACSVSDNP-PTILICLQKIHEENRIFIENGVFAINTLAGP 87 (173)
T ss_dssp HHHHHHHTTSCEECEEEEECST---TCCEEEEECCEEEEEETT-EEEEEEEESSSGGGHHHHHHTEEEEEECBGG
T ss_pred HHHHHHHhhCCCceEEEEEccC---CCceeEEEEEEeeeECCC-CEEEEEeCCCchHHHHHhhCCEEEEEeCCHH
Confidence 44566665554 456777664 445554444320000121 2356666778899999999999999887764
No 71
>2d9r_A Conserved hypothetical protein; MCSG, structural genomics, hypothe protein, PSI, protein structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: b.129.2.1
Probab=27.21 E-value=1.1e+02 Score=20.83 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=41.7
Q ss_pred HHHHHhhCCEEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEe
Q 037690 23 ARWLVSQNYWGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAIS 90 (192)
Q Consensus 23 ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~ 90 (192)
+++.+...+.-|-+|++ |+||-+-+-. .++|..++-++..=++..++.....|++.+.
T Consensus 45 i~e~~G~G~v~V~~tI~----g~~~~tsL~p------~g~G~~~Lpvk~~vRka~g~~~GD~V~V~L~ 102 (104)
T 2d9r_A 45 VKTVYGKGRVRVNATFD----GYPYTGYIVR------MGLPCHILGLRQDIRRAIGKQPGDSVYVTLL 102 (104)
T ss_dssp HHHHHCSSCEEEEEEET----TEEEEEEEEE------SSTTCEEEEECHHHHHHHTCCTTSEEEEEEE
T ss_pred HHHhcCCCceEEEEEEC----CEEEEEEEEE------CCCCcEEEEecHHHHHHcCCCCCCEEEEEEE
Confidence 44444467888889996 8999662222 2467888888888788888888888777764
No 72
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=25.45 E-value=86 Score=23.17 Aligned_cols=68 Identities=12% Similarity=0.087 Sum_probs=44.6
Q ss_pred HHHHHHHHhhCC--EEEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEee
Q 037690 20 AAFARWLVSQNY--WGVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISE 91 (192)
Q Consensus 20 a~~ar~Ll~~~~--~~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~ 91 (192)
.+.-|..+..-. .++++|.+ +|.|.+.++++.-.--.++ -.+.+.+.+.+...+||+++.+.++.|-.
T Consensus 22 ~~~fr~a~~~~p~~V~vVTt~~---~g~~ng~t~ss~~svS~~P-Plv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 22 AEVIKSIMRKFPLGVAIVTTNW---KGELVGMTVNTFNSLSLNP-PLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp HHHHHHHHTTSCEECEEEEEEE---TTEEEEEEESCCEEEETTT-TEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred HHHHHHHHHhCCCceEEEEEcc---CCeEEEEEEeccccccCCC-CEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 345677776555 45677765 4778777777641000121 23566667778889999999999888876
No 73
>3k86_A Chlorophenol-4-monooxygenase component 1; NADH:FAD oxidoreductase, oxidoreductase; 2.00A {Burkholderia cepacia} PDB: 3k87_A* 3k88_A*
Probab=23.65 E-value=59 Score=24.38 Aligned_cols=70 Identities=13% Similarity=-0.110 Sum_probs=43.9
Q ss_pred HHHHHHHHhhCCE--EEEEeecCCCCCCeeeeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCCeEEEEeeCC
Q 037690 20 AAFARWLVSQNYW--GVLNTISSDLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKRSSLAISEYP 93 (192)
Q Consensus 20 a~~ar~Ll~~~~~--~~LAT~~~~~~G~P~~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~vSl~v~~~~ 93 (192)
.+.-|..|..-.. ++++|.+. +| |.+..+++.-.--.++ -.+.+.+.+.+...+||+++.+.++.|-..+
T Consensus 19 ~~~fr~am~~~p~gV~vVTt~~~--~g-~~gmt~ss~~svS~~P-Plv~v~i~~~~~T~~~i~~sg~F~Vnvl~~~ 90 (185)
T 3k86_A 19 SFDFRDALSKASTPVTVVATNGP--FG-LAGLTCSAVCSVCDRP-PTVLLCINRKSYAAGIIKSNGVLSVNWLAAG 90 (185)
T ss_dssp HHHHHHHHTTSEEECEEEEECST--TC-CEEEEECCEEEEEETT-EEEEEEEETTSHHHHHHHHHCEEEEEECBGG
T ss_pred HHHHHHHHHhCCCCcEEEEEecC--CC-ceEEEeeeEeeEECCC-CEEEEEECCCchHHHHHHHCCeEEEEECcHH
Confidence 4456666665554 45777664 34 6666665530000121 2356667788899999999999998887654
No 74
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.12 E-value=27 Score=22.10 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=24.9
Q ss_pred eeEeccccCCCCCCCCceEEEEecCChhhHhhhcCCC
Q 037690 48 GNVVSFSDGLPNEGSGVPYFYLTTLDPTARNALRDKR 84 (192)
Q Consensus 48 ~S~v~y~d~~~~~~~g~~~~~~s~~s~h~~Nl~~np~ 84 (192)
|+-.-|+ ..||.++.+++....+.-.+.+||+
T Consensus 17 G~G~~~V-----r~Dgkvf~FcssKC~k~f~~krnPR 48 (66)
T 3j21_V 17 GTGKMYV-----RNDGRVLFFCSRKCERYYFMGRNPR 48 (66)
T ss_dssp TCCEEEE-----CSSSCEEEESSHHHHHHHHTTCCTT
T ss_pred CCCeEEE-----ecCCcEEEEECHHHHHHHHcCCCcc
Confidence 4455566 5689999999988877777888886
No 75
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=20.00 E-value=48 Score=25.78 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=31.3
Q ss_pred CccceeccCCCCCCchHHHHHHHHHHhhCCEEEEEeecCCCCCCeeeeEec
Q 037690 2 VEGRLISTISKKPHPNDAAAFARWLVSQNYWGVLNTISSDLGGAPFGNVVS 52 (192)
Q Consensus 2 ~~~~~~~~~~~~p~~~~~a~~ar~Ll~~~~~~~LAT~~~~~~G~P~~S~v~ 52 (192)
+.|.|+++...+++. ..+..+++.++....+++| |.|+.+...
T Consensus 28 lDGTLl~~~~~i~~~--~~~al~~l~~~G~~v~iaT------GR~~~~~~~ 70 (285)
T 3pgv_A 28 LDGTLLSPDHFLTPY--AKETLKLLTARGINFVFAT------GRHYIDVGQ 70 (285)
T ss_dssp CCCCCSCTTSCCCHH--HHHHHHHHHTTTCEEEEEC------SSCGGGGHH
T ss_pred CcCCCCCCCCcCCHH--HHHHHHHHHHCCCEEEEEc------CCCHHHHHH
Confidence 579999988777654 5666788888888888988 666554433
Done!