BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037694
(355 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297742243|emb|CBI34392.3| unnamed protein product [Vitis vinifera]
Length = 381
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 289/354 (81%), Positives = 329/354 (92%)
Query: 2 RARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLT 61
RARIEV+V+NFLKILNSP PAISDLPLI+R+ SNSRV++GLLT+VS IFLSHSFCTRSL
Sbjct: 28 RARIEVAVLNFLKILNSPSPAISDLPLISRRWSNSRVNRGLLTEVSCIFLSHSFCTRSLM 87
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
+ NAAKAFVRVWKV+E CFQIL QEKRVTQRELFYKLLC SP+YFT QLQVNRTIQDV+A
Sbjct: 88 RPNAAKAFVRVWKVVEMCFQILVQEKRVTQRELFYKLLCSSPQYFTCQLQVNRTIQDVVA 147
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
LL CSR+SLGI+ASSRG V GRL+LQ E +DCSACGSSG++ISGD++LLE++ +KTD
Sbjct: 148 LLRCSRYSLGIMASSRGAVTGRLLLQAFISETVDCSACGSSGHAISGDMNLLERMVMKTD 207
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
ARYIIVVEKHAIFQRL ED VFNQIPSILITAKGYPDIATRFLL+R++RAFPDLPILALV
Sbjct: 208 ARYIIVVEKHAIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPILALV 267
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
DWNPAGLAILCTFKFGSIGMG+EAYRYACNVKWLGLRGDD+QLIPE+SL+PLKPRDLQIA
Sbjct: 268 DWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGDDLQLIPEESLIPLKPRDLQIA 327
Query: 302 RSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+SL SSEIL+ENY+ EL +MV +G+RAE+EALYF GY++LGKYIAKKIVQA+Y+
Sbjct: 328 KSLKSSEILEENYRNELEVMVQSGRRAEIEALYFRGYNFLGKYIAKKIVQANYV 381
>gi|356540428|ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO11-2-like [Glycine max]
Length = 382
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/355 (79%), Positives = 322/355 (90%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
VRARIEVSV+NFLKILN+ PAISDLPLI RK SNSRV+ GLLT++S +FLS+S TRSL
Sbjct: 28 VRARIEVSVLNFLKILNASSPAISDLPLIQRKYSNSRVNHGLLTELSRVFLSNSVSTRSL 87
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+ NAAKAFVRVWKVME C+QIL QEKRVTQRELFYKLLCDSP F SQ VNRTIQD++
Sbjct: 88 MRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSPHLFPSQTHVNRTIQDLV 147
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
ALL CSRFSLGI+ASSRGLVAGRL+LQEP +E +DCS CGSSG++ISGDL+LL+ L L
Sbjct: 148 ALLRCSRFSLGIMASSRGLVAGRLILQEPGKEAVDCSLCGSSGFAISGDLNLLDSLVLNA 207
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
DARY+I+VEKHAIFQRLTED F+QIPSILITAKGYPDIATRFLL+R+++AFPDLPILAL
Sbjct: 208 DARYVIIVEKHAIFQRLTEDRFFHQIPSILITAKGYPDIATRFLLYRISKAFPDLPILAL 267
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
VDWNPAGLAILCTFKFGSIGMG+EAYRYACNVKWLGLRG D+ L+P QS +PLKP+DLQI
Sbjct: 268 VDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGHDLPLLPNQSFVPLKPKDLQI 327
Query: 301 ARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
A+SLMSS ILQ+NYKEE++LMV +G+RAE+EALYF+GYDYLGKYIAKKIVQ+DY+
Sbjct: 328 AQSLMSSGILQDNYKEEVALMVQSGRRAEIEALYFNGYDYLGKYIAKKIVQSDYV 382
>gi|30696943|ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
gi|75335899|sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2;
Short=AtSPO11-2
gi|7270977|emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|91806019|gb|ABE65738.1| DNA topoisomerase VIA [Arabidopsis thaliana]
gi|332196057|gb|AEE34178.1| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
Length = 383
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 273/354 (77%), Positives = 315/354 (88%)
Query: 2 RARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLT 61
RARIEVSV+N L+ILNSPDPAISDL LINRK SNS +++G+LTDVS+IFLS SF SLT
Sbjct: 30 RARIEVSVLNLLRILNSPDPAISDLSLINRKRSNSCINKGILTDVSYIFLSTSFTKSSLT 89
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
+ AKAFVRVWKVME CFQIL QEKRVTQRELFYKLLCDSP+YF+SQ++VNR++QDV+A
Sbjct: 90 NAKTAKAFVRVWKVMEICFQILLQEKRVTQRELFYKLLCDSPDYFSSQIEVNRSVQDVVA 149
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
LL CSR+SLGI+ASSRGLVAGRL LQEP +E +DCSACGSSG++I+GDL+LL+ ++TD
Sbjct: 150 LLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFAITGDLNLLDNTIMRTD 209
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
ARYII+VEKHAIF RL ED VFN IP + ITAKGYPDIATRF LHR++ FPDLPIL LV
Sbjct: 210 ARYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPDLPILVLV 269
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
DWNPAGLAILCTFKFGSIGMG+EAYRYACNVKW+GLRGDD+ LIPE+SL+PLKP+D QIA
Sbjct: 270 DWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNLIPEESLVPLKPKDSQIA 329
Query: 302 RSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+SL+SS+ILQENY EELSLMV G+RAE+EALY HGY+YLGKYIA KIVQ YI
Sbjct: 330 KSLLSSKILQENYIEELSLMVQTGKRAEIEALYCHGYNYLGKYIATKIVQGKYI 383
>gi|297836981|ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
gi|297332213|gb|EFH62631.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 270/354 (76%), Positives = 316/354 (89%)
Query: 2 RARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLT 61
RARIEVSV+N L+ILNSPDPAISDL LINRK SNS ++QG+LTDVS+IFLS SF SLT
Sbjct: 30 RARIEVSVLNLLRILNSPDPAISDLSLINRKRSNSCINQGILTDVSYIFLSTSFTKSSLT 89
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
+ AK FVRVWKVME CFQIL QEKRVTQRELFYKLLCDSP+YF+SQ++VNRT+QDV+A
Sbjct: 90 NAKTAKTFVRVWKVMEICFQILLQEKRVTQRELFYKLLCDSPDYFSSQIEVNRTVQDVVA 149
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
LL CSR+SLGI+ASSRGLVAGRL LQEP +E +DCSACGSSG++I+GDL+LL+ +++D
Sbjct: 150 LLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFTITGDLNLLDNTIMRSD 209
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
ARYII+VEKHAIF RL ED VFN IP + ITAKGYPDIATRF LHR++ FP+LPILALV
Sbjct: 210 ARYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPNLPILALV 269
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
DWNPAGLAILCTFKFGSIGMG+EAYRYACNVKW+GLRGDD+ LIP++SL+PLKP+D QIA
Sbjct: 270 DWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNLIPDESLVPLKPKDSQIA 329
Query: 302 RSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+SL+SS+ILQ+NY++ELSLMV G+RAE+EALY HGY+YLGKYIA KIVQ YI
Sbjct: 330 KSLLSSKILQDNYRDELSLMVQTGKRAEIEALYCHGYNYLGKYIATKIVQGKYI 383
>gi|357481549|ref|XP_003611060.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
gi|355512395|gb|AES94018.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
Length = 390
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/363 (76%), Positives = 322/363 (88%), Gaps = 8/363 (2%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
VRARIEVSV++FLKILN+ +PAISDLPLI RKSSNSRV+ GLLT++S++FLS+S TRSL
Sbjct: 28 VRARIEVSVLSFLKILNASNPAISDLPLIQRKSSNSRVNHGLLTELSYVFLSNSVSTRSL 87
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+ NAAKAFVRVWKVME C+QIL QEKRVTQRELFYKLLC S F SQ VNRTIQD++
Sbjct: 88 MRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCHSQHLFPSQKDVNRTIQDLV 147
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
ALL CSR+SLGI+ASSRG++AGRL+LQEP +E +DCS CGSSG++ISGDL+LL+KL L
Sbjct: 148 ALLRCSRYSLGIMASSRGIIAGRLILQEPGKEAVDCSVCGSSGHAISGDLNLLDKLILNA 207
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
DARYII+VEKHAIFQRL ED FNQIPSILITAKGYPDIATRFLLHR++RAFPDLPILAL
Sbjct: 208 DARYIIIVEKHAIFQRLAEDRFFNQIPSILITAKGYPDIATRFLLHRISRAFPDLPILAL 267
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
VDWNPAGLAILCTFKFGS+GMG+E+YRYACNVKWLGLRG D+ ++P+QS +PLK +DLQI
Sbjct: 268 VDWNPAGLAILCTFKFGSVGMGLESYRYACNVKWLGLRGHDLPMLPDQSFVPLKTKDLQI 327
Query: 301 ARSLMSSEI--------LQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQA 352
A+SLMSS I L ENYKEE++LMV +G+RAE+EALYFHGYDYLGKYIAKKIVQ+
Sbjct: 328 AQSLMSSRILPVSHSEPLNENYKEEVTLMVESGRRAEIEALYFHGYDYLGKYIAKKIVQS 387
Query: 353 DYI 355
DYI
Sbjct: 388 DYI 390
>gi|449452446|ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 384
Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/355 (76%), Positives = 322/355 (90%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
V ARI+V+V+NFL+ILNS PAIS+LPLI+R+SSNSRVSQG+LTD SWIFLSHSFCTRSL
Sbjct: 30 VVARIQVAVLNFLRILNSSSPAISNLPLIDRRSSNSRVSQGILTDDSWIFLSHSFCTRSL 89
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+ NA+KAFVRVWK+ME C QIL Q+K+VTQRELFYKLLCDSP YF++QL VNRTIQDV+
Sbjct: 90 MRPNASKAFVRVWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVNRTIQDVV 149
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
ALL CSR+SLGI+ASSRGLVAGRL+LQEP QEV+DC+ACGSSGY ISGDL LL+ L LKT
Sbjct: 150 ALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLLQTLTLKT 209
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
DARYIIV+EKHAIFQRL +D VFN+IPSILITAKGYPD+ATR+ LH++ + F LP+ L
Sbjct: 210 DARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGL 269
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
VDWNPAGLAILCTFK+GSIGMG+EAYRYACNVKWLG+RGDD+QLIP++SL+PLKPRDLQI
Sbjct: 270 VDWNPAGLAILCTFKYGSIGMGLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQI 329
Query: 301 ARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
A+SL+SS+ILQENY++EL+LMV GQ+AE+EALY +G+DYL KYI KKI+Q YI
Sbjct: 330 AKSLLSSKILQENYRQELTLMVERGQKAELEALYHNGFDYLEKYIVKKIIQFSYI 384
>gi|357139785|ref|XP_003571458.1| PREDICTED: meiotic recombination protein SPO11-2-like [Brachypodium
distachyon]
Length = 382
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 301/356 (84%), Gaps = 1/356 (0%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRS 59
VRARIEV+V+NFL L+SP PAIS LPLI RKSSN + GLL+DVS ++LS++FC RS
Sbjct: 27 VRARIEVAVLNFLAALSSPSSPAISVLPLIARKSSNCSLRSGLLSDVSSVYLSYAFCKRS 86
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
LT+ N AK+FVRVWKVME C++IL + K VTQRELFYKLL DSP+YFT Q VN+TIQDV
Sbjct: 87 LTRENDAKSFVRVWKVMEMCYKILGEGKLVTQRELFYKLLSDSPKYFTCQRHVNQTIQDV 146
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
++LL C+R SLGI+ASSRG + GRL+L EP E IDCS G SG++I+GDL+ L KL+L
Sbjct: 147 VSLLRCTRQSLGIMASSRGALIGRLLLHEPEGEHIDCSILGPSGHAITGDLNQLSKLNLY 206
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+DARY+I+VEK A+FQRL ED ++NQ+P I+ITAKGYPDIATRF+LHRL++ FP++PI A
Sbjct: 207 SDARYLILVEKDAVFQRLAEDRLYNQLPCIVITAKGYPDIATRFILHRLSQTFPNMPIFA 266
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
LVDWNPAGLAILCT+K+GSI MG+E+YRYACNVKWLG+RGDD++LIP+ + LKPRDLQ
Sbjct: 267 LVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGIRGDDLELIPQSAFQELKPRDLQ 326
Query: 300 IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
IA+ LMSS+ LQ+ ++ EL+LMV G+RAE+EALY HG+D+LGKYIA+KIVQ DYI
Sbjct: 327 IAKGLMSSKFLQDKHRAELALMVEMGKRAEIEALYCHGFDFLGKYIARKIVQGDYI 382
>gi|449501862|ref|XP_004161479.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 346
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/311 (78%), Positives = 285/311 (91%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
V ARI+V+V+NFL+ILNS PAIS+LPLI+R+SSNSRVSQG+LTD SWIFLSHSFCTRSL
Sbjct: 30 VVARIQVAVLNFLRILNSSSPAISNLPLIDRRSSNSRVSQGILTDDSWIFLSHSFCTRSL 89
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+ NA+KAFVRVWK+ME C QIL Q+K+VTQRELFYKLLCDSP YF++QL VNRTIQDV+
Sbjct: 90 MRPNASKAFVRVWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVNRTIQDVV 149
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
ALL CSR+SLGI+ASSRGLVAGRL+LQEP QEV+DC+ACGSSGY ISGDL LL+ L LKT
Sbjct: 150 ALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLLQTLTLKT 209
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
DARYIIV+EKHAIFQRL +D VFN+IPSILITAKGYPD+ATR+ LH++ + F LP+ L
Sbjct: 210 DARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFSHLPMFGL 269
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
VDWNPAGLAILCTFK+GSIGMG+EAYRYACNVKWLG+RGDD+QLIP++SL+PLKPRDLQI
Sbjct: 270 VDWNPAGLAILCTFKYGSIGMGLEAYRYACNVKWLGVRGDDLQLIPQESLVPLKPRDLQI 329
Query: 301 ARSLMSSEILQ 311
A+SL+SS+ILQ
Sbjct: 330 AKSLLSSKILQ 340
>gi|53125146|emb|CAE53723.1| topoisomerase 6 subunit A [Oryza sativa Indica Group]
Length = 385
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/357 (64%), Positives = 295/357 (82%), Gaps = 2/357 (0%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLL-TDVSWIFLSHSFCTR 58
VRARIEV+V+NFL L P PAIS LPLI+R ++N + + LL DVS ++LS++ C R
Sbjct: 29 VRARIEVAVLNFLAALTDPAAPAISALPLISRGAANRGLRRALLRDDVSSVYLSYASCKR 88
Query: 59 SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQD 118
SLT++N AKAFVRVWKVME C++IL + K VT RELFY LL +SP YFT Q VN+T+QD
Sbjct: 89 SLTRANDAKAFVRVWKVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQD 148
Query: 119 VIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
V++LL C+R SLGI+ASSRG + GRL+LQ P +E +DCS G SG++I+GDL++L KL
Sbjct: 149 VVSLLRCTRQSLGIMASSRGALIGRLVLQGPEEEHVDCSILGPSGHAITGDLNVLSKLIF 208
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+DARYIIVVEK AIFQRL ED +++ +P ILITAKGYPD+ATRF+LHRL++ +P++PI
Sbjct: 209 SSDARYIIVVEKDAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIF 268
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDL 298
ALVDWNPAGLAILCT+K+GSI MG+E+YRYACNVKWLGLRGDD+QLIP+ + LKPRDL
Sbjct: 269 ALVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGLRGDDLQLIPQSAYQELKPRDL 328
Query: 299 QIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
QIA+SL+SS+ LQ+ ++ EL+LM+ G+RAE+EALY HG+D+LGKY+A+KIVQ DYI
Sbjct: 329 QIAKSLLSSKFLQDKHRAELTLMLETGKRAEIEALYSHGFDFLGKYVARKIVQGDYI 385
>gi|115474861|ref|NP_001061027.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|37805855|dbj|BAC99506.1| putative SPO11 protein [Oryza sativa Japonica Group]
gi|113622996|dbj|BAF22941.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|150371043|dbj|BAF65345.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
Length = 385
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/357 (64%), Positives = 295/357 (82%), Gaps = 2/357 (0%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLL-TDVSWIFLSHSFCTR 58
VRARIEV+V+NFL L P PAIS LPLI+R ++N + + LL DVS ++LS++ C R
Sbjct: 29 VRARIEVAVLNFLAALTDPAAPAISALPLISRGAANRGLRRALLRDDVSSVYLSYASCKR 88
Query: 59 SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQD 118
SLT++N AKAFVRVWKVME C++IL + K VT RELFY LL +SP YFT Q VN+T+QD
Sbjct: 89 SLTRANDAKAFVRVWKVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQD 148
Query: 119 VIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
V++LL C+R SLGI+ASSRG + GRL++Q P +E +DCS G SG++I+GDL++L KL
Sbjct: 149 VVSLLRCTRQSLGIMASSRGALIGRLVVQGPEEEHVDCSILGPSGHAITGDLNVLSKLIF 208
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+DARYIIVVEK AIFQRL ED +++ +P ILITAKGYPD+ATRF+LHRL++ +P++PI
Sbjct: 209 SSDARYIIVVEKDAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIF 268
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDL 298
ALVDWNPAGLAILCT+K+GSI MG+E+YRYACNVKWLGLRGDD+QLIP+ + LKPRDL
Sbjct: 269 ALVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGLRGDDLQLIPQSAYQELKPRDL 328
Query: 299 QIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
QIA+SL+SS+ LQ+ ++ EL+LM+ G+RAE+EALY HG+D+LGKY+A+KIVQ DYI
Sbjct: 329 QIAKSLLSSKFLQDKHRAELTLMLETGKRAEIEALYSHGFDFLGKYVARKIVQGDYI 385
>gi|195653947|gb|ACG46441.1| meiotic recombination protein SPO11 [Zea mays]
gi|223973125|gb|ACN30750.1| unknown [Zea mays]
Length = 382
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/356 (66%), Positives = 297/356 (83%), Gaps = 3/356 (0%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRS 59
VRARIEV+V+NFL L SP PAIS LPLI+R S+N + GLL DVS ++LS++FC RS
Sbjct: 29 VRARIEVAVLNFLAALASPSSPAISVLPLISRSSANCSLRSGLLNDVSSVYLSYTFCKRS 88
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
LT + KAFVRVWKVME C++IL + K V QRELFYKLL DSP+YF+ Q VN+ IQDV
Sbjct: 89 LTHN--PKAFVRVWKVMEMCYKILGEGKLVQQRELFYKLLSDSPKYFSCQRHVNQAIQDV 146
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
++LL C+R SLG++ASSRG + GRL+L EP+ E IDCS G+SG++I+GDL+LL KL+L
Sbjct: 147 VSLLRCTRQSLGVMASSRGALIGRLVLHEPDGEQIDCSILGASGHAITGDLNLLSKLNLS 206
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+ +RYIIVVEK A+FQRL ED ++NQ+P ILITAKGYPDIATRF+LHRL++ FP++PI A
Sbjct: 207 SGSRYIIVVEKDAVFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFA 266
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
LVDWNPAGLAILCT+K+GSI MG+E+YRYACNVKWLG+RG D+ LIPE + LKPRDLQ
Sbjct: 267 LVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGVRGGDLHLIPEDAFQELKPRDLQ 326
Query: 300 IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
IA+SLMSS+ LQE+++ EL+LMV G+RA++EALY HG+D+LGKYIA+KIVQ DYI
Sbjct: 327 IAKSLMSSKFLQESHRAELALMVERGKRADIEALYSHGFDFLGKYIARKIVQGDYI 382
>gi|242080619|ref|XP_002445078.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
gi|241941428|gb|EES14573.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
Length = 384
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/356 (65%), Positives = 293/356 (82%), Gaps = 3/356 (0%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRS 59
VRARIEV+V+NFL L SP PAIS LPLI+R S+N + GLL DVS ++LSH+FC RS
Sbjct: 31 VRARIEVAVLNFLAALASPSSPAISVLPLISRSSANCSLRSGLLNDVSSVYLSHTFCKRS 90
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
L + KAFVRVWKVME C++IL + K V QRELFYKLL DSP+YF+ Q VN+ IQDV
Sbjct: 91 LMHN--PKAFVRVWKVMEMCYKILGEGKLVHQRELFYKLLSDSPKYFSCQRHVNQAIQDV 148
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
++LL C+R SLG++ASSRG + GRL+L EP++E IDCS G+SG++I+GDL+LL KL+L
Sbjct: 149 VSLLRCTRQSLGVMASSRGALIGRLVLHEPDEEQIDCSILGASGHAITGDLNLLSKLNLS 208
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+DARYIIVVEK AIFQRL ED ++NQ+P ILITAKGYPDIATRF+LHRL++ FP++PI A
Sbjct: 209 SDARYIIVVEKDAIFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFA 268
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
LVDWNPAGLAI+CT+K+GSI MG+E+YRYACNVKWLG+RGDD+QLIPE + LKPRDLQ
Sbjct: 269 LVDWNPAGLAIMCTYKYGSISMGLESYRYACNVKWLGMRGDDLQLIPESAFQVLKPRDLQ 328
Query: 300 IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+ + + QE+++ EL+LMV G+RA++EALY HG+DYLGKYIA+KIVQ DYI
Sbjct: 329 TCTNYLRPQFHQESHRAELTLMVEKGKRADIEALYSHGFDYLGKYIARKIVQGDYI 384
>gi|218200496|gb|EEC82923.1| hypothetical protein OsI_27876 [Oryza sativa Indica Group]
Length = 503
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/372 (61%), Positives = 295/372 (79%), Gaps = 17/372 (4%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLL-TDVSWIFLSHSFCTR 58
VRARIEV+V+NFL L P PAIS LPLI+R ++N + + LL DVS ++LS++ C R
Sbjct: 132 VRARIEVAVLNFLAALTDPAAPAISALPLISRGAANRGLRRALLRDDVSSVYLSYASCKR 191
Query: 59 SLTKSNAAKAFVR---------------VWKVMETCFQILSQEKRVTQRELFYKLLCDSP 103
SLT++N AKAFVR VWKVME C++IL + K VT RELFY LL +SP
Sbjct: 192 SLTRANDAKAFVRAKKSVFDSFSFALEIVWKVMEMCYKILGEGKLVTLRELFYTLLSESP 251
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSG 163
YFT Q VN+T+QDV++LL C+R SLGI+ASSRG + GRL+LQ P +E +DCS G SG
Sbjct: 252 TYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSRGALIGRLVLQGPEEEHVDCSILGPSG 311
Query: 164 YSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRF 223
++I+GDL++L KL +DARYIIVVEK AIFQRL ED +++ +P ILITAKGYPD+ATRF
Sbjct: 312 HAITGDLNVLSKLIFSSDARYIIVVEKDAIFQRLAEDRIYSHLPCILITAKGYPDLATRF 371
Query: 224 LLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQ 283
+LHRL++ +P++PI ALVDWNPAGLAILCT+K+GSI MG+E+YRYACNVKWLGLRGDD+Q
Sbjct: 372 ILHRLSQTYPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGLRGDDLQ 431
Query: 284 LIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK 343
LIP+ + LKPRDLQIA+SL+SS+ LQ+ ++ EL+LM+ G+RAE+EALY HG+D+LGK
Sbjct: 432 LIPQSAYQELKPRDLQIAKSLLSSKFLQDKHRAELTLMLETGKRAEIEALYSHGFDFLGK 491
Query: 344 YIAKKIVQADYI 355
Y+A+KIVQ DYI
Sbjct: 492 YVARKIVQGDYI 503
>gi|37805856|dbj|BAC99507.1| putative SPO11 protein [Oryza sativa Japonica Group]
Length = 363
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 281/338 (83%), Gaps = 1/338 (0%)
Query: 19 PDPAISDLPLINRKSSNSRVSQGLL-TDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVME 77
P PAIS LPLI+R ++N + + LL DVS ++LS++ C RSLT++N AKAFVRVWKVME
Sbjct: 26 PAPAISALPLISRGAANRGLRRALLRDDVSSVYLSYASCKRSLTRANDAKAFVRVWKVME 85
Query: 78 TCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSR 137
C++IL + K VT RELFY LL +SP YFT Q VN+T+QDV++LL C+R SLGI+ASSR
Sbjct: 86 MCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSR 145
Query: 138 GLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G + GRL++Q P +E +DCS G SG++I+GDL++L KL +DARYIIVVEK AIFQRL
Sbjct: 146 GALIGRLVVQGPEEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAIFQRL 205
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
ED +++ +P ILITAKGYPD+ATRF+LHRL++ +P++PI ALVDWNPAGLAILCT+K+G
Sbjct: 206 AEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCTYKYG 265
Query: 258 SIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEE 317
SI MG+E+YRYACNVKWLGLRGDD+QLIP+ + LKPRDLQIA+SL+SS+ LQ+ ++ E
Sbjct: 266 SISMGLESYRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKFLQDKHRAE 325
Query: 318 LSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
L+LM+ G+RAE+EALY HG+D+LGKY+A+KIVQ DYI
Sbjct: 326 LTLMLETGKRAEIEALYSHGFDFLGKYVARKIVQGDYI 363
>gi|238908556|gb|ACF79646.2| unknown [Zea mays]
Length = 353
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 275/329 (83%), Gaps = 2/329 (0%)
Query: 27 PLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQE 86
P I+R S+N + GLL DVS ++LS++FC RSLT + KAFVRVWKVME C++IL +
Sbjct: 27 PEISRSSANCSLRSGLLNDVSSVYLSYTFCKRSLTHN--PKAFVRVWKVMEMCYKILGEG 84
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML 146
K V QRELFYKLL DSP+YF+ Q VN+ IQDV++LL C+R SLG++ASSRG + GRL+L
Sbjct: 85 KLVQQRELFYKLLSDSPKYFSCQRHVNQAIQDVVSLLRCTRQSLGVMASSRGALIGRLVL 144
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI 206
EP+ E IDCS G+SG++I+GDL+LL KL+L + +RYIIVVEK A+FQRL ED ++NQ+
Sbjct: 145 HEPDGEQIDCSILGASGHAITGDLNLLSKLNLSSGSRYIIVVEKDAVFQRLAEDRLYNQL 204
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY 266
P ILITAKGYPDIATRF+LHRL++ FP++PI ALVDWNPAGLAILCT+K+GSI MG+E+Y
Sbjct: 205 PCILITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAILCTYKYGSISMGLESY 264
Query: 267 RYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
RYACNVKWLG+RG D+ LIPE + LKPRDLQIA+SLMSS+ LQE+++ EL+LMV G+
Sbjct: 265 RYACNVKWLGVRGGDLHLIPEDAFQELKPRDLQIAKSLMSSKFLQESHRAELALMVERGK 324
Query: 327 RAEVEALYFHGYDYLGKYIAKKIVQADYI 355
RA++EALY HG+D+LGKYIA+KIVQ DYI
Sbjct: 325 RADIEALYSHGFDFLGKYIARKIVQGDYI 353
>gi|222639941|gb|EEE68073.1| hypothetical protein OsJ_26101 [Oryza sativa Japonica Group]
Length = 420
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/357 (56%), Positives = 260/357 (72%), Gaps = 48/357 (13%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLL-TDVSWIFLSHSFCTR 58
VRARIEV+V+NFL L P PAIS LPLI+R ++N + + LL DVS ++LS++ C R
Sbjct: 110 VRARIEVAVLNFLAALTDPAAPAISALPLISRGAANRGLRRALLRDDVSSVYLSYASCKR 169
Query: 59 SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQD 118
SLT++N AKAFVR D
Sbjct: 170 SLTRANDAKAFVR----------------------------------------------D 183
Query: 119 VIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
V++LL C+R SLGI+ASSRG + GRL++Q P +E +DCS G SG++I+GDL++L KL
Sbjct: 184 VVSLLRCTRQSLGIMASSRGALIGRLVVQGPEEEHVDCSILGPSGHAITGDLNVLSKLIF 243
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+DARYIIVVEK AIFQRL ED +++ +P ILITAKGYPD+ATRF+LHRL++ +P++PI
Sbjct: 244 SSDARYIIVVEKDAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIF 303
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDL 298
ALVDWNPAGLAILCT+K+GSI MG+E+YRYACNVKWLGLRGDD+QLIP+ + LKPRDL
Sbjct: 304 ALVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGLRGDDLQLIPQSAYQELKPRDL 363
Query: 299 QIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
QIA+SL+SS+ LQ+ ++ EL+LM+ G+RAE+EALY HG+D+LGKY+A+KIVQ DYI
Sbjct: 364 QIAKSLLSSKFLQDKHRAELTLMLETGKRAEIEALYSHGFDFLGKYVARKIVQGDYI 420
>gi|302806102|ref|XP_002984801.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
gi|300147387|gb|EFJ14051.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
Length = 354
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 243/329 (73%), Gaps = 4/329 (1%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKR 88
+ R SN + +GLL + IFLSH T S TKS + K + RVWK++E C+Q+L+ K+
Sbjct: 26 VRRNCSNVLMQRGLLQGDN-IFLSHLDSTLSFTKSGSMKRYFRVWKMLELCYQLLTLGKK 84
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQ-DVIALLHCSRFSLGIVASSRGLVAGRLMLQ 147
TQRE+FY+LLCD+ EYF Q Q +T+ DV+ +L CSR+SLGI+AS+RG + GRL++Q
Sbjct: 85 ATQREIFYRLLCDASEYFQCQEQKAKTMHADVVGILKCSRYSLGILASARGAIVGRLVIQ 144
Query: 148 EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP 207
E N+E +DC+ G +GY I GDL LL+ L L +DARYI+V+EK A+FQRL+ED F IP
Sbjct: 145 ELNREPVDCTKIGINGYIIDGDLELLQNLTLTSDARYILVIEKDAVFQRLSEDRFFQTIP 204
Query: 208 SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
SILITAKGYPD+A+R +LH+L+R+FP LPILALVDWNP GL I+CT+KFGS+GMG+EA
Sbjct: 205 SILITAKGYPDLASRVMLHKLHRSFPLLPILALVDWNPCGLGIICTYKFGSVGMGLEAPH 264
Query: 268 YACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNG 325
Y C+VKWLG+ +D+ IP + + L RD Q+A+ L+SS +LQ + Y+EEL M+ G
Sbjct: 265 YVCDVKWLGVSSEDLPRIPPEYFVELSARDRQLAKGLLSSAMLQNHPRYREELERMIQAG 324
Query: 326 QRAEVEALYFHGYDYLGKYIAKKIVQADY 354
+R E+EALY HGY L Y+A+KIVQ Y
Sbjct: 325 KRVEIEALYAHGYKSLSSYVAQKIVQMRY 353
>gi|6692104|gb|AAF24569.1|AC007764_11 F22C12.24 [Arabidopsis thaliana]
Length = 299
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/356 (55%), Positives = 235/356 (66%), Gaps = 86/356 (24%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
RARIEVSV+N L+ILNSPDPAISDL S C +
Sbjct: 29 ARARIEVSVLNLLRILNSPDPAISDL---------------------------SLCGK-- 59
Query: 61 TKSNAAKAFVRVWK-VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
+WK CF+ + + +E + +I DV
Sbjct: 60 -----------LWKYAFRFCFK-----RNESHKE-------------------SSSITDV 84
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
+ALL CSR+SLGI+ASSRGLVAGRL LQEP +E +DCSACGSSG++I+GDL+LL+ ++
Sbjct: 85 VALLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFAITGDLNLLDNTIMR 144
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
TDARYII+VEKHAIF RL ED VFN IP + ITAKGYPDIATR
Sbjct: 145 TDARYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATR----------------- 187
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
NPAGLAILCTFKFGSIGMG+EAYRYACNVKW+GLRGDD+ LIPE+SL+PLKP+D Q
Sbjct: 188 ----NPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNLIPEESLVPLKPKDSQ 243
Query: 300 IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
IA+SL+SS+ILQENY EELSLMV G+RAE+EALY HGY+YLGKYIA KIVQ YI
Sbjct: 244 IAKSLLSSKILQENYIEELSLMVQTGKRAEIEALYCHGYNYLGKYIATKIVQGKYI 299
>gi|302808341|ref|XP_002985865.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
gi|300146372|gb|EFJ13042.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
Length = 354
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 242/329 (73%), Gaps = 4/329 (1%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKR 88
+ R SN + +GLL + IFLSH T S TKS + K + RVWK++E C+Q+L+ K+
Sbjct: 26 VRRNCSNVLMQRGLLQGDN-IFLSHLDSTLSFTKSGSMKRYFRVWKMLELCYQLLTLGKK 84
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQ-DVIALLHCSRFSLGIVASSRGLVAGRLMLQ 147
TQRE+FY+LLCD+ EYF Q Q +T+ DV+ +L CSR+SLGI+AS+RG + GRL++Q
Sbjct: 85 ATQREIFYRLLCDASEYFQCQEQKAKTMHADVVGILKCSRYSLGILASARGAIVGRLVIQ 144
Query: 148 EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP 207
E N+E +DC+ G +GY I GDL LL+ L L +DARYI+V+EK A+FQRL+ED F IP
Sbjct: 145 ELNREPVDCTKIGINGYIIDGDLELLQNLTLTSDARYILVIEKDAVFQRLSEDRFFQTIP 204
Query: 208 SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
SILITAKGYPD+A+R +LH+L+R+FP LPILALVDWNP GL I+CT+KFGS+GMG+EA
Sbjct: 205 SILITAKGYPDLASRVMLHKLHRSFPLLPILALVDWNPCGLGIICTYKFGSVGMGLEAPH 264
Query: 268 YACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNG 325
Y C+VKWLG+ +D+ I + + L RD Q+A+ L+SS +LQ + Y+EEL M+ G
Sbjct: 265 YVCDVKWLGVSSEDLPRITPEYFVELSARDRQLAKGLISSAMLQNHPRYREELERMIQAG 324
Query: 326 QRAEVEALYFHGYDYLGKYIAKKIVQADY 354
+R E+EALY HGY L Y+A+KIVQ Y
Sbjct: 325 KRVEIEALYAHGYKSLSGYVAQKIVQMRY 353
>gi|225426144|ref|XP_002272935.1| PREDICTED: endoglucanase-like [Vitis vinifera]
Length = 753
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/248 (71%), Positives = 208/248 (83%), Gaps = 14/248 (5%)
Query: 118 DVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD 177
DV+ALL CSR+SLGI+ASSRG V GRL+LQEPNQE +DCSACGSSG++ISGD++LLE++
Sbjct: 510 DVVALLRCSRYSLGIMASSRGAVTGRLLLQEPNQETVDCSACGSSGHAISGDMNLLERMV 569
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+KTDARYIIVVEKHAIFQRL ED VFNQIPSILITAKGYPDIATRFLL+R++RAFPDLPI
Sbjct: 570 MKTDARYIIVVEKHAIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPI 629
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSL---LPLK 294
LALVDWNPAGLAILCTFKFGSIGMG+EAYRY + L D + L +P+
Sbjct: 630 LALVDWNPAGLAILCTFKFGSIGMGLEAYRYGAFL----LSPDKILTFAVLELNIKMPID 685
Query: 295 -------PRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAK 347
PRDLQIA+SL SSEIL+ENY+ EL +MV +G+RAE+EALYF GY++LGKYIAK
Sbjct: 686 ISPNIQLPRDLQIAKSLKSSEILEENYRNELEVMVQSGRRAEIEALYFRGYNFLGKYIAK 745
Query: 348 KIVQADYI 355
KIVQA+Y+
Sbjct: 746 KIVQANYV 753
>gi|168053052|ref|XP_001778952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669624|gb|EDQ56207.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 214/287 (74%), Gaps = 5/287 (1%)
Query: 72 VWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG 131
VWKVM+ C+Q+L K+ TQRE+FY +L S Y TSQ QVN IQD +A+L C+R SLG
Sbjct: 1 VWKVMQICYQLLGIGKQATQREIFYNILSTSSSYITSQNQVNSAIQDAVAVLLCTRRSLG 60
Query: 132 IVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
I+ASS+G V GRL+++E + +DCS GSS Y IS D+++ K +DARYI+V+EK
Sbjct: 61 ILASSKGAVVGRLVIKEHGGDTVDCSNLGSSSYPISADMNM--KQHFYSDARYILVIEKD 118
Query: 192 AIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
AIFQRL E+ F ++P I++TAKG+PD+A+R LLHRL++ FP + I ALVDWNPAGLAI+
Sbjct: 119 AIFQRLVEERFFLKVPCIIMTAKGFPDLASRALLHRLHQEFPSMLIFALVDWNPAGLAII 178
Query: 252 CTFKFGSIGMGMEAYRYACNVKWLGLRG-DDVQLIPEQSLLPLKPRDLQIARSLMSSEIL 310
CT++FGSI MG+EA RY C+VKWLGLR D + +P + L RD+ ARSL++S++L
Sbjct: 179 CTYRFGSIRMGLEAPRYVCDVKWLGLRNRDALTYVPATAFTSLTDRDMTQARSLLASKML 238
Query: 311 QEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
Q + YK+E+ M+ GQ+AE+EALY HGY++L K+I KKIV+ D+I
Sbjct: 239 QNHKQYKQEILEMLTFGQKAEIEALYAHGYEFLAKFITKKIVRQDFI 285
>gi|255598401|ref|XP_002537001.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223517856|gb|EEF25382.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 135
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/133 (84%), Positives = 125/133 (93%)
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
++TDARYIIVVEKHAIFQRL ED VFNQI ILITAKGYPDIATRFLLH+L+R+FP+L I
Sbjct: 1 MRTDARYIIVVEKHAIFQRLAEDRVFNQISCILITAKGYPDIATRFLLHKLSRSFPELLI 60
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRD 297
LALVDWNPAGLAIL TFKFGSIGMG+EAYRYACNVKWLG+RGDD+QLIPE+SL+PLKP+D
Sbjct: 61 LALVDWNPAGLAILSTFKFGSIGMGLEAYRYACNVKWLGVRGDDLQLIPEESLVPLKPKD 120
Query: 298 LQIARSLMSSEIL 310
LQIA+SLM SEI
Sbjct: 121 LQIAKSLMCSEIF 133
>gi|303276490|ref|XP_003057539.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
gi|226461891|gb|EEH59184.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
Length = 409
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 180/293 (61%), Gaps = 6/293 (2%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQ--VNRTIQDVIALLHC 125
A+ R+WK++ T LS+ + +TQR L+Y L P+ F V ++D + LL+C
Sbjct: 118 AYARLWKLLATVHHHLSERRAITQRALYYLLCARHPKLFPPGRARLVAAALRDAVTLLNC 177
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
+R ++G+ ++SRG VAGR+ + P V + S+ + + GD+ +E+ L++DAR++
Sbjct: 178 TRAAMGVTSASRGQVAGRVAILTPEDGVWRDFSDASAHFVVPGDVRAVERARLRSDARFV 237
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
++VEK A F +L + + ++P +L+TAKG+PD+ATR L + FP +P+LALVDWNP
Sbjct: 238 LIVEKDAAFDKLCRERIHARVPCVLVTAKGFPDLATRAFLKKFASEFPRVPMLALVDWNP 297
Query: 246 AGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLM 305
+GL IL T++ GS G +EA RYA +VKWLG+R D++ + ++ PL D ++++
Sbjct: 298 SGLLILRTYRAGSSGGALEASRYALDVKWLGVRRADLERVDARARQPLTELDKAKIKNML 357
Query: 306 SSEILQENYKEELSLMVHNGQRAEVEALYFH---GYDYLGKYIAKKIVQADYI 355
++E + EL M+ +G +AE+E+LY G L +++ K ++ DY
Sbjct: 358 AAET-GASQASELRAMLESGMKAEIESLYPEADGGVFTLSEFVVSKYLRGDYF 409
>gi|307105917|gb|EFN54164.1| hypothetical protein CHLNCDRAFT_135583 [Chlorella variabilis]
Length = 423
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 165/276 (59%), Gaps = 11/276 (3%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
+A+A R+W ++E ++L + TQREL+Y+ + E F S V IQD + +L
Sbjct: 130 ESAEAVARLWVLLEAVHEMLLAGLQATQRELWYRF--KTLEVFRSPRDVGEAIQDAVGML 187
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEV-IDCSACGSSGYSISGDLSLLEK-LDLKTD 181
R +LGI ASS+GLVAGRL++ + DC+A G +G I GD++ + + ++D
Sbjct: 188 QVPRSALGITASSKGLVAGRLVVHDQRAGTETDCAALGGAGMQIPGDIAHISRHYAYQSD 247
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
A+ ++VVEK A+FQRL + F+ +P IL T KG PD+ATR L L+ AFPDLP++ LV
Sbjct: 248 AQLVVVVEKDAVFQRLVQQRFFDAVPCILATGKGVPDLATRAFLSGLSEAFPDLPLVGLV 307
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
DWNPAG ILC ++FGS MG E+ YA + WLG R +Q + L RD +
Sbjct: 308 DWNPAGANILCVYRFGSARMG-ESQHYALRTLGWLGARSSQLQQADAGAFQELTARDRSM 366
Query: 301 ARSLMSSEILQENYKE---ELSLMVHNGQRAEVEAL 333
A +L S +L+ E EL M+ +G +AE+EAL
Sbjct: 367 AANL--SAVLRGAAPEWAAELGRMLSSGSKAEIEAL 400
>gi|302807688|ref|XP_002985538.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
gi|300146744|gb|EFJ13412.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
Length = 415
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 189/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S + +Q + ++ I L R S+ K +++E Q+ S++ VT+R+
Sbjct: 96 SRTSANQLYVEELDRIVLKDKTSIRPFASSSTVKKTAITTRILELVHQLCSKQIHVTKRD 155
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + FT Q Q + + DV +L C+R SL +VAS +G+V GRL+ E + +
Sbjct: 156 LFYTDV----KLFTEQAQSDTVLDDVSCMLGCTRTSLNVVASEKGVVVGRLVFVE-DGDR 210
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ ++ D+++DA +I++VEK A F RL ED +N+ P +++TA
Sbjct: 211 IDCTKMGVGGKAIPPNIDKIQ--DMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTA 268
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+L LVD +P GL IL + GS M ++ ++
Sbjct: 269 KGQPDVATRLFLRKMKMEL-RLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDI 327
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IP+Q LP+ D++ R L+ + ++++ + +EL LMV N ++A
Sbjct: 328 KWLGVRPSDLDKYRIPQQCRLPMSELDVKTGRDLLEEDFIKKDPRWYQELELMVKNKEKA 387
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ + D+I
Sbjct: 388 EIQALSSFGFQYLSEVYLPMKLQERDWI 415
>gi|302810679|ref|XP_002987030.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
gi|300145195|gb|EFJ11873.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
Length = 415
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 189/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S + +Q + ++ I L R S+ K +++E Q+ S++ VT+R+
Sbjct: 96 SRTSANQLYVEELDRIVLKDKTSIRPFASSSTVKKTAITTRILELVHQLCSKQIHVTKRD 155
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + FT Q Q + + DV +L C+R SL +VAS +G+V GRL+ E + +
Sbjct: 156 LFYTDV----KLFTEQAQSDTVLDDVSCMLGCTRTSLNVVASEKGVVVGRLVFVE-DGDR 210
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ ++ D+++DA +I++VEK A F RL ED +N+ P +++TA
Sbjct: 211 IDCTKMGVGGKAIPPNIDKIQ--DMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTA 268
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+L LVD +P GL IL + GS M ++ ++
Sbjct: 269 KGQPDVATRLFLRKMKMEL-RLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDI 327
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IP+Q LP+ D++ R L+ + ++++ + +EL LMV N ++A
Sbjct: 328 KWLGVRPSDLDKYRIPQQCRLPMSELDVKTGRDLLEEDFIKKDPRWYQELELMVKNKEKA 387
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ + D+I
Sbjct: 388 EIQALSSFGFQYLSEVYLPMKLQERDWI 415
>gi|297741485|emb|CBI32617.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L R + + ++++ Q+ ++ VT+R+
Sbjct: 144 SRSSANQLYVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRD 203
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + DV +L C+R SL ++AS +G+V GRL+ + N ++
Sbjct: 204 LFYTDV----KLFQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSD-NGDM 258
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + D+++DA +I++VEK A + RL ED +N+ P I++TA
Sbjct: 259 IDCTKMGMGGKAIPPNIDRVG--DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTA 316
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 317 KGQPDVATRLFLRKMKTEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 375
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + L+ + +++N + EEL+LMV Q+A
Sbjct: 376 KWLGIRPSDLDKYSIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 435
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D++
Sbjct: 436 EIQALSSFGFQYLSEVYLPLKLQQQDWL 463
>gi|225439757|ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
Length = 420
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L R + + ++++ Q+ ++ VT+R+
Sbjct: 101 SRSSANQLYVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRD 160
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + DV +L C+R SL ++AS +G+V GRL+ + N ++
Sbjct: 161 LFYTDV----KLFQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSD-NGDM 215
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + D+++DA +I++VEK A + RL ED +N+ P I++TA
Sbjct: 216 IDCTKMGMGGKAIPPNIDRVG--DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTA 273
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 274 KGQPDVATRLFLRKMKTELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 332
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + L+ + +++N + EEL+LMV Q+A
Sbjct: 333 KWLGIRPSDLDKYSIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 392
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D++
Sbjct: 393 EIQALSSFGFQYLSEVYLPLKLQQQDWL 420
>gi|255568446|ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223535494|gb|EEF37163.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 421
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S + +Q + ++ I L R ++ + K++ Q+ + VT+R+
Sbjct: 102 SRAATNQLYVPELDRIVLKDKNTLRPFAHISSVRKSTITAKILSLVHQLCLKNIHVTKRD 161
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + DV +L C+R SL +VA+ +G+V GRL+ + N ++
Sbjct: 162 LFYTDV----KLFQDQTQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSD-NGDM 216
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ ++ D+++DA +I++VEK A + RL ED +N+ P I++TA
Sbjct: 217 IDCTKMGMGGKAIPPNIDRVD--DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTA 274
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 275 KGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 333
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + L+ + +++N + EEL+LMV Q+A
Sbjct: 334 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKA 393
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D++
Sbjct: 394 EIQALSSFGFQYLSEVYLPLKLQQQDWL 421
>gi|449448703|ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
gi|449521501|ref|XP_004167768.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
Length = 420
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 201/361 (55%), Gaps = 20/361 (5%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
V+A IE ++ + + S + D+P S S +Q + ++ I L R
Sbjct: 74 VQATIESVILKIARSILSGNGFAFDVP------SRSGANQLYVPELDRIVLKDKTALRPY 127
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+ + ++++ Q+ + VT+R+LFY + + F Q Q + + DV
Sbjct: 128 ANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDV----KLFQDQTQSDSVLDDVS 183
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
+L C+R SL ++A+ +G+V GRL+ + N ++IDC+ G G +I ++ + D+++
Sbjct: 184 CILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQS 240
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
DA +I++VEK A + RL ED +N+ P I++TAKG PD+ATR L ++ LP+LAL
Sbjct: 241 DALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LPVLAL 299
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRD 297
VD +P GL IL + GS M ++ ++KWLG+R D+ IPEQ LP+ +D
Sbjct: 300 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 359
Query: 298 LQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADY 354
++ + L+ + +++N + EELSLMV Q+AE++AL G+ YL + Y+ K+ Q D+
Sbjct: 360 IKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 419
Query: 355 I 355
+
Sbjct: 420 L 420
>gi|224069320|ref|XP_002326329.1| predicted protein [Populus trichocarpa]
gi|222833522|gb|EEE71999.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 187/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L R ++ + +++ Q+ + VT+R+
Sbjct: 104 SRSATNQLYVPELDRIVLKDKNTLRPFANISSVRKCTITARILSLIHQLCLKSIHVTKRD 163
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + DV +L C+R SL ++A+ +G+V GRL+ + N ++
Sbjct: 164 LFYTDV----KLFQDQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSD-NGDM 218
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + D+++DA +I++VEK A + RL ED +N+ P I++TA
Sbjct: 219 IDCTKMGMGGKAIPPNIDRVG--DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTA 276
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 277 KGQPDVATRLFLRKMKTEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 335
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + L+ + +++N + EELSLMV Q+A
Sbjct: 336 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKA 395
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D++
Sbjct: 396 EIQALSSFGFQYLSEVYLPLKLQQQDWL 423
>gi|323455743|gb|EGB11611.1| hypothetical protein AURANDRAFT_52497 [Aureococcus anophagefferens]
Length = 407
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 185/328 (56%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L H+ RS + + +V +++++ VT+R+
Sbjct: 88 SRSATNQRYVRELDRIVLKHNASERSFANVGQVRKTAIMTRVFSLVHEVVTKGIHVTKRD 147
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q + + + D + C R L +VA+ +GLV GR+ E + +
Sbjct: 148 LFYTDV----KLFKKQEESDAVLDDAACTIGCPRSCLNVVAADKGLVVGRVQFDE-DGDP 202
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G +G +I + + ++++DA +I++VEK A + RL ED +NQ P ILIT
Sbjct: 203 IDCTRMGVTGKAIPAYIDKIS--NIRSDAEFILLVEKDAAYNRLAEDRFYNQFPCILITG 260
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L RL +A +P+LA VD +P GL IL + GS M +A ++
Sbjct: 261 KGQPDVATRMFLSRL-KAELKIPVLAFVDSDPYGLKILSVYMSGSKAMSYDANSLTTPDI 319
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLGLR D+ +P+Q LP+ P+D+++ + L+ + + +N + +EL M+H Q+A
Sbjct: 320 KWLGLRPSDLDAYNLPDQCRLPMTPKDIEMGKQLLKEDFVLKNKQWVKELERMLHTKQKA 379
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ ++ + Y+ +K+ Q D+I
Sbjct: 380 EIQALSAFGFQFVTQVYLPRKLRQGDWI 407
>gi|356548204|ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 417
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L R + + ++++ Q+ + VT+R+
Sbjct: 98 SRSAANQLYVPELDRIVLKDKSSLRPFANISTVRKSAITARILQLIHQLCIKGIHVTKRD 157
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q+Q + + DV +L C+R SL +VA+ +G+V GRL+ + N ++
Sbjct: 158 LFYTDV----KLFQDQIQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSD-NGDM 212
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + D+++DA +I++VEK A + RL ED +N+ P I++TA
Sbjct: 213 IDCTKMGMGGKAIPPNIDRVG--DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTA 270
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD++TR L ++ LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 271 KGQPDVSTRLFLRKMKTEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 329
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + L+ + +++N + EEL+LMV Q+A
Sbjct: 330 KWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKA 389
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D++
Sbjct: 390 EIQALSTFGFQYLSEVYLPLKLQQKDWL 417
>gi|356537457|ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 419
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L R + + ++++ Q+ + VT+R+
Sbjct: 100 SRSAANQLYVPELDRIVLKDKSSLRPFANISTVRKSAITARILQLIHQLCLKGIHVTKRD 159
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q+Q + + DV +L C+R SL +VA+ +G+V GRL+ + N ++
Sbjct: 160 LFYTDV----KLFQDQIQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSD-NGDM 214
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + D+++DA +I++VEK A + RL ED +N+ P I++TA
Sbjct: 215 IDCTKMGMGGKAIPPNIDRVG--DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTA 272
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD++TR L ++ LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 273 KGQPDVSTRLFLRKMKIEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 331
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + L+ + +++N + EEL+LMV Q+A
Sbjct: 332 KWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKA 391
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D++
Sbjct: 392 EIQALSTFGFQYLSEVYLPLKLQQKDWL 419
>gi|412989091|emb|CCO15682.1| predicted protein [Bathycoccus prasinos]
Length = 424
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S + Q + ++ I L + + + T ++ + + +VM+ +LS+ VT+R+
Sbjct: 105 SRGQNDQVYIDQLNRIVLKNKSTSAAFTNMSSVRKVTILTRVMQLVHGVLSKGIHVTKRD 164
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q + + D+ LL C+R SL +VAS +G+V GRL +E +
Sbjct: 165 LFYTDV----KLFKDQKDSDAVLDDISCLLGCTRNSLHVVASEKGVVVGRLRYKEDGDD- 219
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + +L+TDA+++++VEK A F RL ED +N+ P I+ITA
Sbjct: 220 IDCTKMGVGGKAIPSNVDKV--TELRTDAKFVLLVEKDAAFMRLAEDRFYNKYPCIIITA 277
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ R LP+LALVD +P GL I+ + GS M ++ ++
Sbjct: 278 KGQPDVATRLFLSKVKRELK-LPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDI 336
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ L + +D++ ++ + +Q+N + +E+ +M+ +A
Sbjct: 337 KWLGVRPSDLDKFKIPEQCRLEMTAKDIETGNHMLKEDFIQQNPDWVKEVEIMLKTKTKA 396
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL +G+ YL + Y+ K+ + D+I
Sbjct: 397 EIQALSSYGFQYLSEVYLPLKLQEGDWI 424
>gi|15241959|ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|297806215|ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A;
AltName: Full=Meiotic recombination protein SPO11-3;
Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
gi|15488539|gb|AAL01152.1|AF323679_1 putative topoisomerase VI subunit A [Arabidopsis thaliana]
gi|7413557|emb|CAB86036.1| meiosis specific-like protein [Arabidopsis thaliana]
gi|12331186|emb|CAC24689.1| topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis thaliana]
gi|297316828|gb|EFH47250.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|332003139|gb|AED90522.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
Length = 427
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 201/361 (55%), Gaps = 20/361 (5%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
V+ IE ++ + + + D +P +R +SN Q + ++ I L R
Sbjct: 81 VQTEIETVIVQIARSILAGDGFSFSVP--SRAASN----QLYVPELDRIVLKDKSTLRPF 134
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
++ + +++ Q+ + VT+R+LFY + + F Q Q + + DV
Sbjct: 135 ASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVS 190
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
+L C+R SL ++A+ +G+V GRL+ + N ++IDC+ G G +I ++ + D+++
Sbjct: 191 CMLGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQS 247
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
DA +I++VEK A + RL ED +N+ P I++TAKG PD+ATR L ++ LP+LAL
Sbjct: 248 DAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLAL 306
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRD 297
VD +P GL IL + GS M ++ ++KWLG+R D+ IPEQ LP+ +D
Sbjct: 307 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 366
Query: 298 LQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADY 354
++ + ++ + +++N + EEL+LMV Q+AE++AL G+ YL + Y+ K+ Q D+
Sbjct: 367 IKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDW 426
Query: 355 I 355
+
Sbjct: 427 L 427
>gi|308803671|ref|XP_003079148.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
gi|116057603|emb|CAL53806.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
Length = 422
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 175/288 (60%), Gaps = 14/288 (4%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
+VM+ +LS+ VT+R+LFY + + F Q + + D+ +L C+R SL +V
Sbjct: 143 RVMQLVHGVLSRGIHVTKRDLFYTDV----KLFRDQKDSDAVLDDISCMLGCTRNSLHVV 198
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
AS +G+V GRL +E E IDC+ G G +I ++ + D++TDA+++++VEK A
Sbjct: 199 ASEKGVVVGRLQYKEDGDE-IDCTKMGVGGKAIPSNIDKI--TDMRTDAKFVLLVEKDAA 255
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
F RL ED +N+ P I+ITAKG PD+ATR L ++ R +P+LALVD +P GL I+
Sbjct: 256 FMRLAEDRFYNKYPCIIITAKGQPDVATRLFLSKVKRDLK-IPVLALVDADPYGLKIISV 314
Query: 254 FKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEIL 310
+ GS M ++ ++KWLG+R D+ IPEQ L + +D++ + +++ + +
Sbjct: 315 YMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPEQCRLDMSAKDIETGQHMLNEDFV 374
Query: 311 QEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
++N + +E+++M+ +AE++AL +G+ YL K Y+ K+ + D+I
Sbjct: 375 KQNPEWVKEINIMLETKTKAEIQALSAYGFQYLTKVYLPLKLAEGDWI 422
>gi|449018621|dbj|BAM82023.1| DNA topoisomerase VI subunit A [Cyanidioschyzon merolae strain 10D]
Length = 433
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 182/323 (56%), Gaps = 14/323 (4%)
Query: 39 SQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKL 98
+Q + ++ I L R+ + + + +V++ ++ ++ T+R+LFY
Sbjct: 119 NQEYVEELERIVLKDGVAIRNFASVASVRKTTIMTRVLQLVHELCTRRIHTTKRDLFYTD 178
Query: 99 LCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA 158
+ + F Q + + + DV L+ C+R SL +VAS +G+V GR+ QE + ++IDC+
Sbjct: 179 V----KLFRQQTESDDVLNDVACLIGCTRNSLNVVASEKGIVVGRVTFQE-DGDLIDCTR 233
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G G +I + ++ +DA +I++VEK A F RL ED +N++ I++TAKG PD
Sbjct: 234 MGVGGKAIPPYTDRI--TNITSDAEFILLVEKDAAFMRLAEDRFYNRVKCIIVTAKGQPD 291
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGL 277
+ TR L RL R LPIL LVD +P GL IL + GS GM ++ A ++KWLG+
Sbjct: 292 VGTRLFLRRLKREL-HLPILGLVDSDPYGLKILSVYMSGSKGMSYDSANLATPDIKWLGI 350
Query: 278 RGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEAL 333
R D+ IPEQ L + DL+ + ++ + +++N + ELSLMV ++AE++AL
Sbjct: 351 RPTDLDRYGIPEQCRLAMTENDLKTGKDMLEEDFIKKNPAWHRELSLMVKRKEKAEIQAL 410
Query: 334 YFHGYDYLGK-YIAKKIVQADYI 355
G+ YL + Y+ +KI D+I
Sbjct: 411 SNFGFQYLTEVYLPEKIRHGDWI 433
>gi|326521994|dbj|BAK04125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 184/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R SSN Q L D+ I L R A+ +V+ +L + V
Sbjct: 122 SRTSSN----QVYLPDLDRIVLLRRESARPFANVATARKATVTARVLSLVHAVLRRGIHV 177
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL +
Sbjct: 178 TKRDLFYTDV----KLFGDQSQSDAILDDVSCMLGCTRSSLHVVASEKGVVVGRLTFAD- 232
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ +VIDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 233 DGDVIDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 290
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 291 ILTAKGQPDVATRLFLRRLKVELK-LPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 349
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + ++ + +++N + +EL M+
Sbjct: 350 TPDIKWLGVRPSDLDKYRVPEQCRLPMSDHDIKVGKEMLEEDFVKQNEGWVKELETMLRT 409
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 410 KQKAEIQALSSFGFQYLTEVYLPLKLQQEDWI 441
>gi|145346380|ref|XP_001417667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577895|gb|ABO95960.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 183/306 (59%), Gaps = 19/306 (6%)
Query: 61 TKSN-AAKAFVR----VWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
TK+N AA + VR + +VM+ +LS+ VT+R+LFY + F Q +
Sbjct: 42 TKANFAAVSSVRKVTILTRVMQLVHGVLSRGIHVTKRDLFYT----DVKLFKDQKDSDAV 97
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEK 175
+ D+ +L C+R SL +VAS +G+V GRL +E E IDC+ G G +I ++ +
Sbjct: 98 LDDISCMLGCTRNSLHVVASEKGVVVGRLQYKEDGDE-IDCTKMGVGGKAIPSNIDKVR- 155
Query: 176 LDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL 235
D++TDA+++++VEK A F RL ED +N+ P I+ITAKG PD+ATR L ++ R +
Sbjct: 156 -DMRTDAKFVLLVEKDAAFMRLAEDRFYNKYPCIIITAKGQPDVATRLFLSKVKRDLK-I 213
Query: 236 PILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLP 292
P+LALVD +P GL I+ + GS M ++ ++KWLG+R D+ IPEQ L
Sbjct: 214 PVLALVDADPYGLKIISVYMQGSKNMAFDSGNLTTPDIKWLGVRPSDLDKFKIPEQCRLE 273
Query: 293 LKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
+ +D++ +++ + ++ N + +E+++M+ +AE+++L +G+ YL + Y+ K+
Sbjct: 274 MTAKDIETGHHMLNEDFIKSNPEWVKEINIMLETKTKAEIQSLSSYGFQYLSEVYLPLKL 333
Query: 350 VQADYI 355
++ D+I
Sbjct: 334 LEGDWI 339
>gi|145353167|ref|XP_001420895.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581131|gb|ABO99188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 287
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 18/261 (6%)
Query: 92 RELFYKL---------LCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG 142
REL+Y + S + ++ Q+ TI+ + L R +LGIVA+S+G VAG
Sbjct: 4 RELYYVMNSRGRRGGWPSGSTQTRVTEHQIAATIRKISQALGAPRIALGIVAASKGQVAG 63
Query: 143 RLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFV 202
R ++ + DC+ACG+ G++I+GDL L+ + +DA Y+IVVEK A+F RL + V
Sbjct: 64 RCHIETASGARFDCTACGNDGWAITGDLFELDATKIHSDAAYVIVVEKDAVFNRLCAERV 123
Query: 203 FNQIPSILITAKGYPDIATRFLLHRLNRAFPD------LPILALVDWNPAGLAILCTFKF 256
F ++P +L+TAKG+PD+ATR LH L RA D LVDWNP+G IL T+
Sbjct: 124 FEKLPCVLVTAKGFPDLATRKFLHLLRRALEDNDRGNEAQFFGLVDWNPSGCWILSTYTV 183
Query: 257 GSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQE---N 313
G+ M+ Y +KW+GLR D+ LIPE + L RD + + ++
Sbjct: 184 GNSSSAMDVSEYVTPLKWIGLRSQDLYLIPECAFQALSSRDEAMINNALNETAATHPLRP 243
Query: 314 YKEELSLMVHNGQRAEVEALY 334
+ EL +M GQ+AE+EALY
Sbjct: 244 FASELEVMQARGQKAEIEALY 264
>gi|168022302|ref|XP_001763679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685172|gb|EDQ71569.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 186/328 (56%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L R + + ++++ Q+ +++ VT+R+
Sbjct: 94 SRSSANQLYVPELDRIVLKDKASFRQFANIASVRKTAITTRILQLVHQLCTKQIHVTKRD 153
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL+ E + +
Sbjct: 154 LFYTDV----KLFQEQGQSDTILDDVSCMLGCTRSSLNVVASEKGVVVGRLIFIE-DGDR 208
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ ++ ++ +DA +I++VEK A F RL ED +N+ P +++TA
Sbjct: 209 IDCTKMGVGGKAIPPNIDKVQGME--SDALFILLVEKDAAFMRLAEDRFYNRFPCVILTA 266
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L ++ LP+L LVD +P GL IL + GS M ++ ++
Sbjct: 267 KGQPDVATRLFLKKMKTDLK-LPVLGLVDSDPYGLKILSVYMSGSKNMSYDSSNLTTPDI 325
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQ--ENYKEELSLMVHNGQRA 328
KWLG+R D+ IPEQ LP+ +D++ + ++ + ++ +N+ +EL LMV ++A
Sbjct: 326 KWLGVRPSDLNKYKIPEQCRLPMSDQDIKTGKDMLEEDFIKKDKNWVKELELMVKTKEKA 385
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D+I
Sbjct: 386 EIQALSSFGFQYLSEVYLPLKLQQEDWI 413
>gi|242041321|ref|XP_002468055.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
gi|241921909|gb|EER95053.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
Length = 436
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 185/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 117 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLGRGIHV 172
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL+ +
Sbjct: 173 TKRDLFYTDV----KLFGDQSQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFAD- 227
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 228 DGDRIDCTRMGVGGKAIPPNVDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 285
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 286 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 344
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL +M+
Sbjct: 345 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELEMMLRT 404
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ + D+I
Sbjct: 405 KQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436
>gi|297600747|ref|NP_001049765.2| Os03g0284800 [Oryza sativa Japonica Group]
gi|150371045|dbj|BAF65346.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|255674417|dbj|BAF11679.2| Os03g0284800 [Oryza sativa Japonica Group]
Length = 442
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 183/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 123 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLRRGIHV 178
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL +
Sbjct: 179 TKRDLFYTDV----KLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFAD- 233
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 234 DGDRIDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 291
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 292 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 350
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 351 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 410
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 411 RQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442
>gi|195647934|gb|ACG43435.1| RHL2 [Zea mays]
Length = 436
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 184/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 117 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLGRGIHV 172
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL+ +
Sbjct: 173 TKRDLFYTDV----KLFGDQTQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFAD- 227
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 228 DGDRIDCTRMGVGGKAIPPNVDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 285
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 286 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 344
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 345 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 404
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ + D+I
Sbjct: 405 KQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436
>gi|226497286|ref|NP_001141583.1| uncharacterized protein LOC100273699 [Zea mays]
gi|194705154|gb|ACF86661.1| unknown [Zea mays]
gi|414866232|tpg|DAA44789.1| TPA: RHL2 [Zea mays]
Length = 436
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 184/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 117 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLGRGIHV 172
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL+ +
Sbjct: 173 TKRDLFYTDV----KLFGDQTQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLVFAD- 227
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 228 DGDRIDCTRMGVGGKAIPPNVDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 285
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 286 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 344
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 345 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 404
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ + D+I
Sbjct: 405 KQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436
>gi|125585844|gb|EAZ26508.1| hypothetical protein OsJ_10402 [Oryza sativa Japonica Group]
Length = 526
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 183/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 207 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLRRGIHV 262
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL +
Sbjct: 263 TKRDLFYTDV----KLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFAD- 317
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 318 DGDRIDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 375
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 376 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 434
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 435 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 494
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 495 RQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 526
>gi|27476077|gb|AAO17008.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108707550|gb|ABF95345.1| DNA topoisomerase VIA, putative, expressed [Oryza sativa Japonica
Group]
Length = 830
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 183/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 511 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLRRGIHV 566
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL +
Sbjct: 567 TKRDLFYTDV----KLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFAD- 621
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 622 DGDRIDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 679
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 680 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 738
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 739 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 798
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 799 RQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 830
>gi|357120049|ref|XP_003561743.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Brachypodium
distachyon]
Length = 464
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 182/328 (55%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S + +Q L ++ I L R A+ +V+ +L + VT+R+
Sbjct: 145 SRTSTNQVYLPELDRIVLLRRESARPFASVGTARKATVTARVLSLVHAVLRRGIHVTKRD 204
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL+ + + +
Sbjct: 205 LFYTDV----KLFGDQSQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLIFAD-DGDR 259
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I++TA
Sbjct: 260 IDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCIILTA 317
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L RL LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 318 KGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDI 376
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ +PEQ LP+ D+++ + ++ + +++N + +EL M+ Q+A
Sbjct: 377 KWLGVRPSDLDKYRVPEQCRLPMTDHDMKVGKEMLEEDFVKQNEGWVKELETMLRTKQKA 436
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ Q D+I
Sbjct: 437 EIQALSSFGFQYLTEVYLPLKLQQEDWI 464
>gi|307106398|gb|EFN54644.1| hypothetical protein CHLNCDRAFT_31596 [Chlorella variabilis]
Length = 416
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 188/329 (57%), Gaps = 16/329 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S+ +Q + ++ I L S R+ ++ + V ++++ ++ ++ VT+R+
Sbjct: 97 SRSKANQLYVPELDRIVLKDSQSHRAFANTSTCRKAVITTRILQLVHELCTKRIHVTKRD 156
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q + + D+ +L C+R SL +VAS +G+V GRL +E + +
Sbjct: 157 LFYTDV----KLFEDQSNSDAILDDLACMLGCTRSSLHVVASEKGVVVGRLTFRE-DGDP 211
Query: 154 IDCSACGSSGYSISGDLSLLEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILIT 212
IDC G G +I ++ +K+D + +DA +I++VEK A F RL ED +N P I+IT
Sbjct: 212 IDCRRMGVGGKAIPPNI---DKVDAITSDAMFILLVEKDAAFMRLAEDRFYNTYPCIIIT 268
Query: 213 AKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-N 271
AKG PD+ATR L +L + +P+LALVD +P GL IL + GS+ M ++ +
Sbjct: 269 AKGQPDVATRLFLRKLKQVL-RIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPD 327
Query: 272 VKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQR 327
+KWLG+R D+ IP+Q LP+ D++ + L+ + ++ N + +EL +MV +
Sbjct: 328 IKWLGVRPSDLDRFSIPQQCRLPMTDEDIKTGKKLLEEDFVKANPEWVKELEIMVTTKVK 387
Query: 328 AEVEALYFHGYDYLG-KYIAKKIVQADYI 355
AE++AL G+ YL +Y+ K+ + D+I
Sbjct: 388 AEIQALSSFGFQYLSQQYLPLKLQEGDWI 416
>gi|125543392|gb|EAY89531.1| hypothetical protein OsI_11065 [Oryza sativa Indica Group]
Length = 830
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 183/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D+ I L R A+ +V+ +L + V
Sbjct: 511 SRAASN----QVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLRRGIHV 566
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL +
Sbjct: 567 TKRDLFYTDV----KLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFAD- 621
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 622 DGDRIDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 679
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 680 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 738
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 739 TPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 798
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 799 RQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 830
>gi|302831884|ref|XP_002947507.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
gi|300267371|gb|EFJ51555.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
Length = 412
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 182/328 (55%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S ++ +Q + ++ I L + R + + +++ +++ + VT+R+
Sbjct: 93 SRAKGNQMYVPELDRIVLRDTVSKRPFANTATCRKAAITARILSLVHELVGKRIHVTKRD 152
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + D+ +L C+R SL +VAS +G+V GRL +E + +
Sbjct: 153 LFYTDV----KLFEDQSQSDAVLDDLACMLGCTRSSLNVVASEKGVVVGRLSFRE-DGDF 207
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC G G +I ++ + D+ +DA +I++VEK A F RL ED +N P I++TA
Sbjct: 208 IDCQRMGVGGKAIPPNIDKVS--DISSDAAFILLVEKDAAFMRLAEDRFYNTYPCIILTA 265
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L RL +P+LALVD +P GL IL + GS+ M ++ ++
Sbjct: 266 KGQPDVATRLFLKRLKSTLK-IPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDI 324
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IP+Q LP+ D++ R L+ + ++ N + +EL LM+ +A
Sbjct: 325 KWLGVRPSDLDRFNIPQQCRLPMTEEDIKTGRRLLEEDFIRANPEWVKELELMLATKVKA 384
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ + D++
Sbjct: 385 EIQALSSFGFQYLTQVYLPLKLQEGDWV 412
>gi|440797878|gb|ELR18952.1| DNA topoisomerase 6 subunit A, putative [Acanthamoeba castellanii
str. Neff]
Length = 464
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 58/347 (16%)
Query: 37 RVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY 96
R S L+ S I L ++S + +++ R+W+V+E ++LSQ K+ TQRE
Sbjct: 146 RTSDNLVMASSQIRLGME--SKSKCFATHPESYYRMWRVLELVHELLSQGKQATQRE--- 200
Query: 97 KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDC 156
V +LL+C R +LG+ AS RG + G + QE + +DC
Sbjct: 201 ---------------------KVASLLNCLRGNLGVTASERGTIIGCVQWQEKGR-TVDC 238
Query: 157 SACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA--- 213
G SG+ ISG+ +L D+K+DAR+IIVVEK A+FQRL ED VF+ +P ILITA
Sbjct: 239 RRGGQSGHLISGN-ALAGMHDIKSDARFIIVVEKDAVFQRLAEDRVFDTLPCILITASTA 297
Query: 214 ---------------------KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+G+PD+ATR LL RL+ LP++ L DWNP G+ +
Sbjct: 298 TVPINLAQVDTSNQKAHCAETEGFPDMATRGLLKRLHEELR-LPVVGLFDWNPGGMGVYI 356
Query: 253 TFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL 310
T+++GS+ G+E++ + ++KWLGL DD++ +P RD + RS+ +S L
Sbjct: 357 TYRYGSVKSGLESHLHTVDIKWLGLCWDDLERMHLPSSCFQDQTERDRRRIRSIQASGCL 416
Query: 311 QENYK--EELSLMVHNGQRAEVEALYFHG-YDYLGKYIAKKIVQADY 354
++N + EL M+ G + E++AL G + ++ K ++ D+
Sbjct: 417 KDNPRCERELEKMLEAGVKVEIQALSHLGSLSCITSHVVTKAIRRDF 463
>gi|219362369|ref|NP_001136603.1| uncharacterized protein LOC100216726 [Zea mays]
gi|194696330|gb|ACF82249.1| unknown [Zea mays]
Length = 184
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/148 (62%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Query: 1 VRARIEVSVINFLKILNSPD-PAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRS 59
VRARIEV+V+NFL L SP PAIS LPLI+R S+N + GLL DVS ++LS++FC RS
Sbjct: 29 VRARIEVAVLNFLAALASPSSPAISVLPLISRSSANCSLRSGLLNDVSSVYLSYTFCKRS 88
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
LT + KAFVRVWKVME C++IL + K V QRELFYKLL DSP+YF+ Q VN+ IQDV
Sbjct: 89 LTHN--PKAFVRVWKVMEMCYKILGEGKLVQQRELFYKLLSDSPKYFSCQRHVNQAIQDV 146
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQ 147
++LL C+R SLG++ASSRG + GRL+L
Sbjct: 147 VSLLRCTRQSLGVMASSRGALIGRLVLH 174
>gi|53127616|emb|CAD79468.1| Topoisomerase VI subunit A [Oryza sativa Indica Group]
Length = 442
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 183/332 (55%), Gaps = 18/332 (5%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
+R +SN Q L D++ I L R A+ +V+ +L + V
Sbjct: 123 SRAASN----QVYLPDLNRIVLVRRESARPFANVATARKATITARVLFLVHAVLRRGIHV 178
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + + F Q Q + + DV +L C+R SL +VAS +G+V GRL +
Sbjct: 179 TKRDLFYTDV----KLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFAD- 233
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
+ + IDC+ G G +I ++ + ++ +DA +I++VEK A F RL ED +N+ P I
Sbjct: 234 DGDRIDCTRMGVGGKAIPPNIDRVSGIE--SDALFILLVEKDAAFMRLAEDRFYNRFPCI 291
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
++TAKG PD+ATR L RL LP+LALVD +P GL IL + GS M ++
Sbjct: 292 ILTAKGQPDVATRLFLRRLKVEL-KLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLT 350
Query: 270 C-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KW G+R D+ +PEQ LP+ D+++ + L+ + +++N + +EL M+
Sbjct: 351 TPDIKWPGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRT 410
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 411 RQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442
>gi|298711265|emb|CBJ26510.1| DNA topoisomerase VI subunit A [Ectocarpus siliculosus]
Length = 639
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 188/332 (56%), Gaps = 16/332 (4%)
Query: 31 RKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVT 90
R + S +Q + ++ I L +R+ + A+ +V++ Q+L + +T
Sbjct: 317 RVPTRSSGNQKYVEELDRIVLGDKVSSRNFVSTAMARKTAITTRVVQLVHQVLGKGIHIT 376
Query: 91 QRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
+R++FY + + F Q + + + DV ++ C+R L +VAS +GLV GR+ E +
Sbjct: 377 KRDMFYTDV----KLFKEQSESDNVLDDVACMVGCTRSCLNVVASDKGLVVGRVTFME-D 431
Query: 151 QEVIDCSACGSSGYSISGDLSLLEKL-DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
++IDC+ G G +I ++K+ ++++DA +I++VEK A + R+ ED + + P I
Sbjct: 432 GDLIDCTRMGVGGKAIP---PYIDKITNIRSDADFILLVEKEAAYMRMAEDRFYQKYPCI 488
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
+ITAKG PD+ATR L RL R ++P++ LVD +P GL IL + GS M ++
Sbjct: 489 VITAKGQPDVATRLFLKRLKREL-NIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLT 547
Query: 270 C-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++KWLG+R D+ IPEQ L + D++ + L+ + +++N + EL LM+ +
Sbjct: 548 TPDIKWLGVRPSDLDRYNIPEQCRLDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKS 607
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
++AE+++L G+ YL + Y+ +K+ D++
Sbjct: 608 KKKAEIQSLSAFGFQYLTQNYLPQKLQNGDWV 639
>gi|219111201|ref|XP_002177352.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217411887|gb|EEC51815.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 430
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 177/313 (56%), Gaps = 14/313 (4%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTS 108
I L +RS ++ +VM+ +L + +T+R+LFY + + F
Sbjct: 126 IVLGGKRSSRSFLNVKESRKSAITLRVMQLLHAVLMKRIHITKRDLFYTDV----KLFVD 181
Query: 109 QLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISG 168
Q + + + DV ++ C+R +L +VAS +GLV GR+ +E + + IDC+ G G +I
Sbjct: 182 QAESDGVLDDVATMIGCTRSNLHVVASDKGLVVGRIQFEE-DGDFIDCTKMGVGGKAIPP 240
Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
+ +E ++ +DA +I++VEK A + R+ ED +++ P I+ITAKG PD+ATR L R+
Sbjct: 241 YIDKIE--NIASDAEFILLVEKEAAYMRMAEDRFYHRYPCIIITAKGQPDVATRMFLARI 298
Query: 229 NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--I 285
+P+L LVD +P GL IL + GS M ++ ++KWLGLR D+ +
Sbjct: 299 TSEL-KIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYDL 357
Query: 286 PEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLG- 342
PEQ L + D++ + +M + +Q+N + +EL +MV ++AE++AL G+ Y+
Sbjct: 358 PEQCRLDMTENDIKTGKEMMKEDFIQKNPEWMKELEIMVKTKKKAEIQALSSFGFQYVTE 417
Query: 343 KYIAKKIVQADYI 355
+Y+ +K+ + D+I
Sbjct: 418 QYLPRKLKEGDWI 430
>gi|255076643|ref|XP_002501996.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
gi|226517261|gb|ACO63254.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
Length = 430
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 179/333 (53%), Gaps = 42/333 (12%)
Query: 56 CTRSLTKSNAAKA--FVRVWKVMETCFQILSQEKRVTQRELFYKLL--CDSPEYFTSQLQ 111
T SL N +A + R+W ++ + L + ++VTQR L+Y + + F
Sbjct: 104 TTLSLRDPNKRRAERYARIWTMLASSHAHLRRNEKVTQRGLYYLMSSGAHTSSLFPDPAT 163
Query: 112 VNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE----PNQEVIDCSACGSSGYSIS 167
VN + D ++L+ SR SLG+VA+ RG V G + ++E P + + D S IS
Sbjct: 164 VNSALLDSVSLVAVSRRSLGVVAAPRGEVGGAMSIREGEDAPWRSLWDES------RQIS 217
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPSILITAKGYPDIATRFLLH 226
GD++ + + + + D RY++VVEKH++F RL E+ V ++P +++TAKG+PD+ATR L
Sbjct: 218 GDIAAIARWEFRGDFRYVLVVEKHSVFHRLFAEERVHTRLPCVVVTAKGFPDLATRAFLK 277
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFG--SIGMGMEAYRYACNVKWLGLRGDDVQL 284
RL P +P L LVDWNP+G+ IL T++ G + +E+ RYA +KWLG+R D+
Sbjct: 278 RLQLTHPHVPFLGLVDWNPSGVLILGTYRAGGRTSSAVLESSRYALELKWLGVRSADLAT 337
Query: 285 IPEQSLLPLKPRDLQIARSLM-------------------SSEILQENYKEELSLMVHNG 325
P + +PL D AR+++ S+E LQ EL+ M G
Sbjct: 338 NPAR--IPLTDLDRAKARTMLRADGARLDGDTAGDESTDASTERLQSARARELTAMCATG 395
Query: 326 QRAEVEALYFHGYDYLGK----YIAKKIVQADY 354
+AE+E+L G+ Y+ +KI++ DY
Sbjct: 396 FKAEIESLCPGSCGGEGRSLSDYVVEKILRGDY 428
>gi|159487423|ref|XP_001701722.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158280941|gb|EDP06697.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 414
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 183/329 (55%), Gaps = 15/329 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S ++ +Q + ++ I L + R + + +++ ++L + VT+R+
Sbjct: 94 SRAKGNQMYVPELDRIVLRDAVSKRPFASTATCRKAAVTTRILGLVHELLGKNIHVTKRD 153
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q Q + + D+ +L C+R SL +VAS +G+V GRL +E + +
Sbjct: 154 LFYTDV----KLFEDQSQSDAILDDLACMLGCTRSSLNVVASEKGVVVGRLSFRE-DGDF 208
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC G G +I ++ + D+ +DA +I++VEK A F RL ED +N P I++TA
Sbjct: 209 IDCQRMGVGGKAIPPNIDKVS--DISSDASFILLVEKDAAFMRLAEDRFYNTYPCIILTA 266
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKF-GSIGMGMEAYRYAC-N 271
KG PD+ATR L +L + +P+LALVD +P GL IL F GS+ M ++ +
Sbjct: 267 KGQPDVATRLFLKKLKSSLK-IPVLALVDSDPYGLKILSVFVLSGSMNMSYDSSNLTTPD 325
Query: 272 VKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQR 327
+KWLG+R D+ IP+Q LP+ D++ + L+ + ++ N + EL LM+ + +
Sbjct: 326 IKWLGVRPSDLDRFDIPQQCRLPMTEEDIKTGKRLLEEDWIKSNPEWVRELELMLASKVK 385
Query: 328 AEVEALYFHGYDYLGK-YIAKKIVQADYI 355
AE++AL G+ YL + Y+ K+ + D+I
Sbjct: 386 AEIQALSSFGFQYLSQVYLPLKLQEGDWI 414
>gi|384248976|gb|EIE22459.1| topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 418
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 184/328 (56%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S ++ +Q + ++ I L S R + + V +V+ ++ ++ VT+R+
Sbjct: 99 SRAKGNQLYVPELDRIVLKDSTSQRPFASTATCRKAVFTTRVLGLVHELCMKQIHVTKRD 158
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q + + DV L C+R SL +VAS +G+V GRL +E + ++
Sbjct: 159 LFYTDV----KLFEDQGNSDAILDDVACFLGCTRSSLHVVASEKGVVVGRLTYRE-DGDL 213
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC G G +I ++ + D+++DA +I++VEK A F RL ED +N P I++TA
Sbjct: 214 IDCQRMGVGGKAIPPNVDKV--TDIQSDALFILLVEKDAAFMRLAEDRFYNTYPCIILTA 271
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+A+R L +L +P+LALVD +P GL IL + GS+ M ++ ++
Sbjct: 272 KGQPDVASRLFLRKLRDTL-RIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDI 330
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ IP+Q LP+ D++ + L+ + +Q N + +EL +M+ + +A
Sbjct: 331 KWLGVRPSDLDRFNIPQQCRLPMTDEDIRTGKRLLEEDFIQANAEWVKELEIMIASKVKA 390
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ YL + Y+ K+ + D+I
Sbjct: 391 EIQALSSFGFQYLSQVYLPLKLQEGDWI 418
>gi|255070111|ref|XP_002507137.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
gi|226522412|gb|ACO68395.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
Length = 391
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 180/310 (58%), Gaps = 18/310 (5%)
Query: 53 HSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
H+F T +++ + + +VM+ +L++ VT+R+LFY + F Q
Sbjct: 93 HTFTT--FHNTSSVRKVAILTRVMQLIHGVLTRGIHVTKRDLFYT----DVKLFRDQKDS 146
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ + D+ LL C+R SL +VAS +G+V G+L E E IDC+ G G +I ++
Sbjct: 147 DSVLDDISCLLGCTRNSLHVVASEKGVVVGKLTYTEDGDE-IDCTKMGIGGKAIPSNI-- 203
Query: 173 LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+++D ++ A+++++VEK A F RL ED +N+ P I+ITAKG PD+ATR L +L R
Sbjct: 204 -DEVDCFRSVAKFVLLVEKDAAFMRLAEDRFYNRFPCIIITAKGQPDVATRLFLSKLKRD 262
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQ 288
+P+LALVD +P GL I+ + GS M ++ ++KWLG+R D+ IPEQ
Sbjct: 263 LR-IPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPEQ 321
Query: 289 SLLPLKPRDLQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
L + +D++ +++ + +Q+N K E+ +M+ + +AE++AL +G+ YL + Y+
Sbjct: 322 CRLEMSQKDIETGHHMLNEDFIQQNPKWVREVKMMLASKTKAEIQALSSYGFQYLSEVYL 381
Query: 346 AKKIVQADYI 355
K+ + D+I
Sbjct: 382 PLKLQEGDWI 391
>gi|308810407|ref|XP_003082512.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
gi|116060981|emb|CAL56369.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
Length = 410
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 162/291 (55%), Gaps = 12/291 (4%)
Query: 69 FVRVWKVMETCFQILSQ---EKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
F R W V + + L + E +T REL+Y + S TS+ Q+ TI+ + L
Sbjct: 119 FERFWDVADVLARGLRRSNCESSMTLRELYYVMNARSAPKRTSEKQLQATIRKLSLALSA 178
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
R +LGI+A+S+G+V GR ++ + + DC+A G+ ISGDL L+ + +DA Y+
Sbjct: 179 PRCALGIIATSKGMVCGRCHIETASGQRFDCTA---EGWPISGDLFELDACSIHSDAAYV 235
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF--PDLPILALVDW 243
IVVEK A+F +L + ++ +P +LITAKGYPD+ATR L L LVDW
Sbjct: 236 IVVEKDAVFNKLCAERIYEYLPCVLITAKGYPDVATRKFLWLLETVLEGSGAKFFGLVDW 295
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARS 303
NP G IL T+ GS ++A + + W+GLR +D++ + ++ L RD + R+
Sbjct: 296 NPHGAWILATYSSGSKRSSIDAAEFVVPLTWIGLRSEDLRDVAADAMQDLTTRDAALIRN 355
Query: 304 LMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYD--YLGKYIAKKIV 350
+ + +++EEL +M G++A++EALY D +L Y++KKI
Sbjct: 356 ALEGDDAHPLCSFREELRIMHDVGKKADIEALYAGRSDDFFLTDYVSKKIA 406
>gi|224011048|ref|XP_002294481.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220969976|gb|EED88315.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 182/328 (55%), Gaps = 14/328 (4%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S S +Q + ++ I L TRS ++ +V++ +L + +T+R+
Sbjct: 33 SRSASNQVYVPELDRIVLGDKTGTRSFLNVKESRKSAITTRVLQLLHAVLLKRIHITKRD 92
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + + F Q + + + DV ++ C+R +L +VAS +GLV GR+ E + +
Sbjct: 93 LFYTDV----KLFVDQSESDGVLDDVATMIGCTRSNLHVVASDKGLVVGRISFFE-DGDF 147
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G G +I + +E ++++DA +I++VEK A + R+ ED + + P I+ITA
Sbjct: 148 IDCTKMGVGGKAIPPYIDKIE--NIQSDAEFILLVEKEAAYMRMAEDRFYQRYPCIVITA 205
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ATR L R+ +P+LALVD +P GL IL + GS M ++ ++
Sbjct: 206 KGQPDVATRMFLSRITSEL-QIPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDI 264
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQENYK--EELSLMVHNGQRA 328
KWLGLR D+ +P+Q L + D++ + L+ + +N K +EL +MV Q+A
Sbjct: 265 KWLGLRPSDLNRYDLPDQCRLNMTENDIKTGKELLQEAFIMKNPKWMKELQIMVKTKQKA 324
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++AL G+ Y+ + Y+ +K+ + D+I
Sbjct: 325 EIQALSSFGFQYITEVYLPRKLKEGDWI 352
>gi|402882177|ref|XP_003904627.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Papio
anubis]
Length = 358
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 190/333 (57%), Gaps = 20/333 (6%)
Query: 33 SSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRV 89
S SRV+ V +SH CT KS++ K+ F + K++ ++++
Sbjct: 36 SGGSRVASRFEDSVGLQMVSH--CTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYA 93
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+++Y DS + F +Q V+ I D+ +L SR SL I+++S+GL+AG L E
Sbjct: 94 TKRDIYY---TDS-QLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEE 149
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PS 208
+ ++C+ CG++ ++ ++ + +L TDA+++++VEK A FQRL +D N++ P
Sbjct: 150 DGTKVNCT-CGATAIAVPSNIQGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPC 206
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
I+IT KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 207 IMITGKGVPDLNTRLLVKKLWDTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHL 265
Query: 269 AC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVH 323
++WLGL D++ +P+ SL+PL RD S++ + Q +++E+ +M
Sbjct: 266 TVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRRPYVTRQPFWRKEMEIMAD 325
Query: 324 NGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ +AE++AL F DYL + Y+ K+ +I
Sbjct: 326 SKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|109091518|ref|XP_001088459.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Macaca
mulatta]
Length = 358
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 190/333 (57%), Gaps = 20/333 (6%)
Query: 33 SSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRV 89
S SRV+ V +SH CT KS++ K+ F + K++ ++++
Sbjct: 36 SGGSRVASRFEDSVGLQMVSH--CTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYA 93
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+++Y DS + F +Q V+ I D+ +L SR SL I+++S+GL+AG L E
Sbjct: 94 TKRDIYY---TDS-QLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEE 149
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PS 208
+ ++C+ CG++ ++ ++ + +L TDA+++++VEK A FQRL +D N++ P
Sbjct: 150 DGTKVNCT-CGATAVAVPSNIQGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPC 206
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
I+IT KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 207 IMITGKGVPDLNTRLLVKKLWDTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHL 265
Query: 269 AC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVH 323
++WLGL D++ +P+ SL+PL RD S++ + Q +++E+ +M
Sbjct: 266 TVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRRPYVTCQPFWRKEMEIMAD 325
Query: 324 NGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ +AE++AL F DYL + Y+ K+ +I
Sbjct: 326 SKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|302800231|ref|XP_002981873.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
gi|300150315|gb|EFJ16966.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
Length = 284
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 166/289 (57%), Gaps = 15/289 (5%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
+V++ +L Q K ++R+L+Y P F Q VN+ + D+ L C+R SL +V
Sbjct: 3 RVLQIVQSLLQQGKHASKRDLYYT----DPGLFKDQATVNQALTDISVRLKCTRSSLHVV 58
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
+ +GL+ G L ++ ++ IDCS C S GY I D ++ D+++ A YIIVVEK +
Sbjct: 59 SVGKGLIMGSLRFKDADR-TIDCSVCKSRGYPIPTDAKMVT--DIRSCAEYIIVVEKETV 115
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
FQRL D + I++T +GYPD+ATR L RL A +LP+ LVD +P GL IL T
Sbjct: 116 FQRLANDGFCRKNNCIVLTGRGYPDVATRSFL-RLLAAETNLPVYGLVDADPYGLDILAT 174
Query: 254 FKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL 310
++FGS+ M +A A +++WLG+ D Q +P++ LLPL D + A ++++ + L
Sbjct: 175 YRFGSLTMAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLPLTNDDRRKAEAMLNRDYL 234
Query: 311 QE---NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ ++ ++L LM+ G + E+EAL + L YI KI A Y+
Sbjct: 235 EHLAFSWNQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKAAAYL 283
>gi|114682755|ref|XP_001170101.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
troglodytes]
gi|397469112|ref|XP_003806208.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
paniscus]
Length = 358
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 190/333 (57%), Gaps = 20/333 (6%)
Query: 33 SSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRV 89
S SR++ V +SH CT KS++ K+ F + K++ ++++
Sbjct: 36 SGGSRLASRFEDSVGLQMVSH--CTTRKIKSDSPKSAQKFALILKILSMIYKLVQSNTYA 93
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+++Y DS + F +Q V+ I D+ +L SR SL I+++S+GL+AG L E
Sbjct: 94 TKRDIYY---TDS-QLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEE 149
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PS 208
+ ++C+ CG++ ++ ++ + +L TDA+++++VEK A FQRL +D N++ P
Sbjct: 150 DGTKVNCT-CGATAVAVPSNIQGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPC 206
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
I+IT KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 207 IMITGKGVPDLNTRLLVKKLWDTF-HIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHL 265
Query: 269 AC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVH 323
++WLGL D++ +P+ SL+PL RD S++ + Q +++E+ +M
Sbjct: 266 TVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMAD 325
Query: 324 NGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ +AE++AL F DYL + Y+ K+ +I
Sbjct: 326 SKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|426392234|ref|XP_004062461.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Gorilla
gorilla gorilla]
Length = 358
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 190/333 (57%), Gaps = 20/333 (6%)
Query: 33 SSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRV 89
S SR++ V +SH CT KS++ K+ F + K++ ++++
Sbjct: 36 SGGSRLASRFEDSVGLQMVSH--CTTRKIKSDSPKSAQKFALILKILSMIYKLVQSNTYA 93
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+++Y DS + F +Q V+ I D+ +L SR SL I+++S+GL+AG L E
Sbjct: 94 TKRDIYY---TDS-QLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEE 149
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PS 208
+ ++C+ CG++ ++ ++ + +L TDA+++++VEK A FQRL +D N++ P
Sbjct: 150 DGTKVNCT-CGATAVAVPSNIQGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPC 206
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
I+IT KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 207 IMITGKGVPDLNTRLLVKKLWDTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHL 265
Query: 269 AC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVH 323
++WLGL D++ +P+ SL+PL RD S++ + Q +++E+ +M
Sbjct: 266 TVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMAD 325
Query: 324 NGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ +AE++AL F DYL + Y+ K+ +I
Sbjct: 326 SKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|114682753|ref|XP_514741.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
troglodytes]
gi|397469110|ref|XP_003806207.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
paniscus]
Length = 396
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSAQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 266 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|426392232|ref|XP_004062460.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Gorilla
gorilla gorilla]
Length = 396
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSAQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 266 DTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|38201680|ref|NP_937998.1| meiotic recombination protein SPO11 isoform b [Homo sapiens]
gi|21706947|gb|AAH33591.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Homo sapiens]
gi|119595932|gb|EAW75526.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 358
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 190/333 (57%), Gaps = 20/333 (6%)
Query: 33 SSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRV 89
+ SR++ V +SH CT KS++ K+ F + K++ ++++
Sbjct: 36 TGGSRLASRFEDSVGLQMVSH--CTTRKIKSDSPKSAQKFSLILKILSMIYKLVQSNTYA 93
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+++Y DS + F +Q V+ I D+ +L SR SL I+++S+GL+AG L E
Sbjct: 94 TKRDIYY---TDS-QLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEE 149
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PS 208
+ ++C+ CG++ ++ ++ + +L TDA+++++VEK A FQRL +D N++ P
Sbjct: 150 DGTKVNCT-CGATAVAVPSNIQGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPC 206
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
I+IT KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 207 IMITGKGVPDLNTRLLVKKLWDTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHL 265
Query: 269 AC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVH 323
++WLGL D++ +P+ SL+PL RD S++ + Q +++E+ +M
Sbjct: 266 TVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMAD 325
Query: 324 NGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ +AE++AL F DYL + Y+ K+ +I
Sbjct: 326 SKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|109091516|ref|XP_001088572.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Macaca
mulatta]
Length = 396
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 266 DTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 KDSLIPLTNRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|402882175|ref|XP_003904626.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Papio
anubis]
Length = 396
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAIAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 266 DTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 KDSLIPLTNRDQMKLDSILRRPYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|6912680|ref|NP_036576.1| meiotic recombination protein SPO11 isoform a [Homo sapiens]
gi|7674367|sp|Q9Y5K1.1|SPO11_HUMAN RecName: Full=Meiotic recombination protein SPO11; AltName:
Full=Cancer/testis antigen 35; Short=CT35
gi|5532654|gb|AAD44812.1|AF149310_1 Spo11 homolog [Homo sapiens]
gi|5815131|gb|AAD52562.1|AF169385_1 SPO11 [Homo sapiens]
gi|61354156|gb|AAX44047.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Homo sapiens]
gi|119595933|gb|EAW75527.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 396
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 266 DTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|301759481|ref|XP_002915573.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Ailuropoda melanoleuca]
gi|281348445|gb|EFB24029.1| hypothetical protein PANDA_003591 [Ailuropoda melanoleuca]
Length = 396
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 179/312 (57%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL ++++S+GL+AG L E + + C+ CGS+ ++ ++
Sbjct: 149 VVDNIINDISCMLKVPRMSLHVLSTSKGLIAGNLRYMEEDGTRVHCT-CGSTAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 208 QGIR--NLITDAKFLLIVEKDATFQRLLDDDFCNRMSPCIMVTGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 266 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 RDTLIPLTKRDQMKLDSVLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|301759479|ref|XP_002915572.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Ailuropoda melanoleuca]
Length = 358
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 179/312 (57%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYYT---DS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL ++++S+GL+AG L E + + C+ CGS+ ++ ++
Sbjct: 111 VVDNIINDISCMLKVPRMSLHVLSTSKGLIAGNLRYMEEDGTRVHCT-CGSTAVAVPSNI 169
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 170 QGIR--NLITDAKFLLIVEKDATFQRLLDDDFCNRMSPCIMVTGKGVPDLNTRLLVKKLW 227
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 228 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 286
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 287 RDTLIPLTKRDQMKLDSVLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 346
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 347 YLPNKLKFGGWI 358
>gi|296200791|ref|XP_002747753.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Callithrix jacchus]
Length = 396
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLRVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L +DA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 208 QGI--WNLVSDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 266 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 325 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|296200789|ref|XP_002747752.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Callithrix jacchus]
Length = 358
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 111 VVDNIINDISCMLRVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 169
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L +DA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 170 QGI--WNLVSDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 227
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 228 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 286
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 287 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 346
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 347 YLPNKLKFGGWI 358
>gi|410953484|ref|XP_003983400.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Felis
catus]
Length = 396
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 178/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CTR KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 95 CTRRKIKSDSPKSVKNFALILKILSIIYKLVQSNTHATKRDIYY---TDS-QLFGNQTVV 150
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I ++S+GL+AG L E + + C+ CG++ ++ ++
Sbjct: 151 DNIINDISCMLKVPRMSLHISSTSKGLIAGNLRYIEEDGTKVHCT-CGTTAVAVPSNIQG 209
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ ++ TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 210 IR--NIITDAKFLLIVEKDATFQRLLDDNFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDT 267
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 268 F-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRD 326
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL + Y+
Sbjct: 327 TLIPLTKRDQMKLDSVLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 386
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 387 PNKLKFGGWI 396
>gi|73992352|ref|XP_853487.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Canis
lupus familiaris]
Length = 396
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 178/310 (57%), Gaps = 17/310 (5%)
Query: 55 FCTRSLTKSN--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
F TR + + + K F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 95 FTTRKIKSDSLKSVKKFALILKILSKIYKLVQSNTYATKRDIYY---TDS-QLFGNQTVV 150
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I+++S+GL+AG L E + + C+ CG++ ++ ++
Sbjct: 151 DNIINDISCMLKVPRMSLHILSTSKGLIAGNLRYIEEDGTRVHCT-CGATAVAVPSNIQG 209
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 210 IR--NLITDAKFLLIVEKDATFQRLLDDNFCNRMSPCIMITGKGVPDLNTRLLVKKLWDT 267
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ ALVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 268 F-HIPVFALVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRD 326
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL + Y+
Sbjct: 327 TLIPLTKRDQMKLDSVLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 386
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 387 PNKLKFGGWI 396
>gi|351697823|gb|EHB00742.1| Meiotic recombination protein SPO11 [Heterocephalus glaber]
Length = 396
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 178/312 (57%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQS 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + + C ACG+S ++ ++
Sbjct: 149 VVDNIIDDISCMLKVPRRSLHILSTSKGLIAGSLRFTEEDGTRVSC-ACGASAIAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
L +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 208 QGLR--NLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGIPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ V+WLGL D+ IP
Sbjct: 266 DLF-HIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAVRWLGLLPSDINRLNIP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL RD S++ + Q +++E+ +M + +AE++AL DYL +
Sbjct: 325 KDSLIPLTKRDQMKLDSILKRPYVTCQPFWRKEMEMMADSRMKAEIQALTSLSSDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|410953486|ref|XP_003983401.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Felis
catus]
Length = 358
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 178/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CTR KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 57 CTRRKIKSDSPKSVKNFALILKILSIIYKLVQSNTHATKRDIYY---TDS-QLFGNQTVV 112
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I ++S+GL+AG L E + + C+ CG++ ++ ++
Sbjct: 113 DNIINDISCMLKVPRMSLHISSTSKGLIAGNLRYIEEDGTKVHCT-CGTTAVAVPSNIQG 171
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ ++ TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 172 IR--NIITDAKFLLIVEKDATFQRLLDDNFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDT 229
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 230 F-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRD 288
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL + Y+
Sbjct: 289 TLIPLTKRDQMKLDSVLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 348
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 349 PNKLKFGGWI 358
>gi|345790222|ref|XP_867449.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Canis
lupus familiaris]
Length = 358
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 178/310 (57%), Gaps = 17/310 (5%)
Query: 55 FCTRSLTKSN--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
F TR + + + K F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 57 FTTRKIKSDSLKSVKKFALILKILSKIYKLVQSNTYATKRDIYY---TDS-QLFGNQTVV 112
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I+++S+GL+AG L E + + C+ CG++ ++ ++
Sbjct: 113 DNIINDISCMLKVPRMSLHILSTSKGLIAGNLRYIEEDGTRVHCT-CGATAVAVPSNIQG 171
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 172 IR--NLITDAKFLLIVEKDATFQRLLDDNFCNRMSPCIMITGKGVPDLNTRLLVKKLWDT 229
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ ALVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 230 F-HIPVFALVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRD 288
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL + Y+
Sbjct: 289 TLIPLTKRDQMKLDSVLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 348
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 349 PNKLKFGGWI 358
>gi|354478583|ref|XP_003501494.1| PREDICTED: meiotic recombination protein SPO11 [Cricetulus griseus]
Length = 361
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++ K+ F + K++ ++++ T+R++FY + + F +Q V
Sbjct: 60 CTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYATKRDIFYT----NSQLFGNQASV 115
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 116 DNIIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYVEEDGTRVQCT-CSATATAVPSNIQG 174
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 175 IR--NLITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGIPDLNTRLLVKKLWDT 232
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ ILC +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 233 F-HIPVFTLVDADPHGIEILCVYKYGSMSMSFEAHSLTVPTIRWLGLLPSDIQRLNIPKD 291
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D + S++ + Q +++EL +M + +AE++AL F DYL + Y+
Sbjct: 292 SLIPLTKHDQRKLDSILKRPYITYQPLWRKELEMMADSKMKAEIQALTFLSADYLSRVYL 351
Query: 346 AKKI 349
K+
Sbjct: 352 PNKL 355
>gi|395509925|ref|XP_003759237.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Sarcophilus harrisii]
Length = 393
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 178/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++A++ F + K++ ++++ T+R+++Y + + F +Q V
Sbjct: 92 CTTKKIKSDSAQSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDI----QLFGNQSVV 147
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R +L I+++S+GL+AG L E + ++C+ CGS+ ++ ++
Sbjct: 148 DNIINDISCMLKVPRRNLHILSTSKGLIAGNLSYIEEDGTKVNCT-CGSTVVAVPSNIQG 206
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 207 IR--NLATDAKFLLIVEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDT 264
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F LPI LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 265 F-HLPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRG 323
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL RD S++ + Q +K+E+ +M +AE++AL F DYL + Y+
Sbjct: 324 TLIPLTKRDQMKLDSILKRPYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYL 383
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 384 PNKLQFGGWI 393
>gi|395509923|ref|XP_003759236.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Sarcophilus harrisii]
Length = 355
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 178/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++A++ F + K++ ++++ T+R+++Y + + F +Q V
Sbjct: 54 CTTKKIKSDSAQSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDI----QLFGNQSVV 109
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R +L I+++S+GL+AG L E + ++C+ CGS+ ++ ++
Sbjct: 110 DNIINDISCMLKVPRRNLHILSTSKGLIAGNLSYIEEDGTKVNCT-CGSTVVAVPSNIQG 168
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 169 IR--NLATDAKFLLIVEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDT 226
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F LPI LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 227 F-HLPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRG 285
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL RD S++ + Q +K+E+ +M +AE++AL F DYL + Y+
Sbjct: 286 TLIPLTKRDQMKLDSILKRPYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYL 345
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 346 PNKLQFGGWI 355
>gi|344296531|ref|XP_003419960.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Loxodonta
africana]
Length = 396
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 179/312 (57%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y + + F +Q
Sbjct: 93 SQCTTRKIKSDSPKSVQNFALILKILSMVYKLVQSNTYATKRDIYYTDI----QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ C S+ ++ ++
Sbjct: 149 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGNLSYIEEDGTRVNCTGC-STAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
L +L TDA+++++VEK A FQRL +D ++I P I++T KG PD+ TR L+ +L
Sbjct: 208 QGLR--NLITDAKFLLIVEKDATFQRLLDDNFCSKISPCIMVTGKGVPDLNTRLLVKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 266 DLF-HIPVFTLVDADPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL K
Sbjct: 325 KNTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLPNKLKFGGWI 396
>gi|344296529|ref|XP_003419959.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Loxodonta
africana]
Length = 358
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 179/312 (57%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y + + F +Q
Sbjct: 55 SQCTTRKIKSDSPKSVQNFALILKILSMVYKLVQSNTYATKRDIYYTDI----QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ C S+ ++ ++
Sbjct: 111 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGNLSYIEEDGTRVNCTGC-STAVAVPSNI 169
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
L +L TDA+++++VEK A FQRL +D ++I P I++T KG PD+ TR L+ +L
Sbjct: 170 QGLR--NLITDAKFLLIVEKDATFQRLLDDNFCSKISPCIMVTGKGVPDLNTRLLVKKLW 227
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 228 DLF-HIPVFTLVDADPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 286
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL K
Sbjct: 287 KNTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKV 346
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 347 YLPNKLKFGGWI 358
>gi|126303194|ref|XP_001377945.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Monodelphis domestica]
Length = 393
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 178/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++AK+ F + K++ ++++ T+R+++Y + + F +Q V
Sbjct: 92 CTTKKIKSDSAKSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDI----QLFGNQKIV 147
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R +L I+++S+GL+AG L E + ++C+ CGS+ ++ ++
Sbjct: 148 DNIINDISCMLKVPRRNLHILSTSKGLIAGSLSYIEEDGTKVNCT-CGSTAVAVPSNIQG 206
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ +L T+A+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 207 IR--NLITNAKFLLIVEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDT 264
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F LPI LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 265 F-HLPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRG 323
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL +D S++ + Q +K+E+ +M +AE++AL F DYL + Y+
Sbjct: 324 TLIPLTKQDQMKLDSILKRPYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYL 383
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 384 PNKLQFGGWI 393
>gi|334312518|ref|XP_003339751.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Monodelphis domestica]
Length = 355
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 178/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++AK+ F + K++ ++++ T+R+++Y + + F +Q V
Sbjct: 54 CTTKKIKSDSAKSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDI----QLFGNQKIV 109
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R +L I+++S+GL+AG L E + ++C+ CGS+ ++ ++
Sbjct: 110 DNIINDISCMLKVPRRNLHILSTSKGLIAGSLSYIEEDGTKVNCT-CGSTAVAVPSNIQG 168
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRA 231
+ +L T+A+++++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 169 IR--NLITNAKFLLIVEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDT 226
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F LPI LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 227 F-HLPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRG 285
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
+L+PL +D S++ + Q +K+E+ +M +AE++AL F DYL + Y+
Sbjct: 286 TLIPLTKQDQMKLDSILKRPYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYL 345
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 346 PNKLQFGGWI 355
>gi|148674664|gb|EDL06611.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_a [Mus musculus]
Length = 353
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ K+ F + KV+ ++++ + T+R+++Y DS + F +Q V
Sbjct: 52 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 107
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 108 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 166
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 167 MQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 224
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 225 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 283
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +K+EL +M + +AE++AL DYL + Y+
Sbjct: 284 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 343
Query: 346 AKKI 349
K+
Sbjct: 344 PNKL 347
>gi|6755624|ref|NP_036176.1| meiotic recombination protein SPO11 isoform a [Mus musculus]
gi|30179896|sp|Q9WTK8.2|SPO11_MOUSE RecName: Full=Meiotic recombination protein SPO11
gi|5815133|gb|AAD52563.1|AF169386_1 SPO11 [Mus musculus]
gi|9367101|gb|AAF87096.1|AF173848_1 SPO11 protein [Mus musculus]
gi|162318682|gb|AAI56814.1| Sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) [synthetic construct]
Length = 396
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ K+ F + KV+ ++++ + T+R+++Y DS + F +Q V
Sbjct: 95 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 150
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 151 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 209
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 210 MQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 267
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 268 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 326
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +K+EL +M + +AE++AL DYL + Y+
Sbjct: 327 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 386
Query: 346 AKKI 349
K+
Sbjct: 387 PNKL 390
>gi|403282455|ref|XP_003932664.1| PREDICTED: meiotic recombination protein SPO11 [Saimiri boliviensis
boliviensis]
Length = 358
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 180/312 (57%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 111 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 169
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
+ +L TDA++I++VEK A FQRL +D N++ P I+IT KG PD+ TR L+ +L
Sbjct: 170 QGI--WNLVTDAKFILIVEKDATFQRLLDDNFCNKMSPCIMITGKGVPDLNTRLLVKKLW 227
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+ +K+GS+ M EA+ ++WLGL D++ +P
Sbjct: 228 DTF-HIPVFTLVDADPHGIEIMFIYKYGSMSMAFEAHHLTVPAIRWLGLLPSDLKRLNVP 286
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ SL+PL D S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 287 KDSLIPLTKSDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 346
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 347 YLPNKLKFGGWI 358
>gi|145312248|ref|NP_001077429.1| meiotic recombination protein SPO11 isoform b [Mus musculus]
gi|5453472|gb|AAD43588.1|AF163053_1 meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
gi|5532652|gb|AAD44811.1|AF149309_1 Spo11 homolog [Mus musculus]
gi|9367033|gb|AAF87090.1|AF165313_1 SPO11 [Mus musculus]
gi|5453482|gb|AAD43591.1| meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
Length = 358
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ K+ F + KV+ ++++ + T+R+++Y DS + F +Q V
Sbjct: 57 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 112
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 113 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 171
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 172 MQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 229
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 230 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 288
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +K+EL +M + +AE++AL DYL + Y+
Sbjct: 289 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 348
Query: 346 AKKI 349
K+
Sbjct: 349 PNKL 352
>gi|148674666|gb|EDL06613.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_c [Mus musculus]
Length = 306
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ K+ F + KV+ ++++ + T+R+++Y DS + F +Q V
Sbjct: 5 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 60
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 61 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 119
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 120 MQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 177
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 178 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 236
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +K+EL +M + +AE++AL DYL + Y+
Sbjct: 237 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 296
Query: 346 AKKI 349
K+
Sbjct: 297 PNKL 300
>gi|348555758|ref|XP_003463690.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Cavia porcellus]
Length = 396
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 177/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
C+ +S++ K+ F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 95 CSTRKIRSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQTVV 150
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I+++S+GL+AG L E + + C ACG+S ++ ++
Sbjct: 151 DNIIDDISCMLKLPRRSLHILSTSKGLIAGNLRYVEEDGTRVTC-ACGASAIAVPSNIQG 209
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D F + P I++T KG PD+ TR L+ RL
Sbjct: 210 IR--NLITDAKFLLIVEKDATFQRLLDDNFCYKMSPCIMVTGKGTPDLNTRLLVRRLWEL 267
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+L LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP+
Sbjct: 268 F-HVPVLTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKD 326
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +++E+ LM + +AE++AL DYL + Y+
Sbjct: 327 SLIPLTKWDQMKLDSILKRPYVTGQPFWRKEMELMADSKMKAEIQALNSLSSDYLSRVYL 386
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 387 PNKLKFGGWI 396
>gi|348555760|ref|XP_003463691.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Cavia porcellus]
Length = 358
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 177/310 (57%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
C+ +S++ K+ F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 57 CSTRKIRSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQTVV 112
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I+++S+GL+AG L E + + C ACG+S ++ ++
Sbjct: 113 DNIIDDISCMLKLPRRSLHILSTSKGLIAGNLRYVEEDGTRVTC-ACGASAIAVPSNIQG 171
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D F + P I++T KG PD+ TR L+ RL
Sbjct: 172 IR--NLITDAKFLLIVEKDATFQRLLDDNFCYKMSPCIMVTGKGTPDLNTRLLVRRLWEL 229
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+L LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP+
Sbjct: 230 F-HVPVLTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKD 288
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +++E+ LM + +AE++AL DYL + Y+
Sbjct: 289 SLIPLTKWDQMKLDSILKRPYVTGQPFWRKEMELMADSKMKAEIQALNSLSSDYLSRVYL 348
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 349 PNKLKFGGWI 358
>gi|320168151|gb|EFW45050.1| topoisomerase [Capsaspora owczarzaki ATCC 30864]
Length = 406
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 183/336 (54%), Gaps = 31/336 (9%)
Query: 25 DLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILS 84
D+P +R SSN Q + + I L + R + + + +V+ ++L+
Sbjct: 97 DVP--SRASSN----QLYVPQLERIVLKSAVSNRPFSSTATVRKTAITTRVLSLVHEVLN 150
Query: 85 QEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL 144
+ +T+R+LFY + F Q + + DV ++ C+R SL +VAS +G+V GR+
Sbjct: 151 KRIHITKRDLFYT----DVKLFEKQNDSDAVLDDVACMIGCTRTSLNVVASEKGVVIGRV 206
Query: 145 MLQEPNQEVIDCSACGSSGYSISGDLSLLEKL-DLKTDARYIIVVEKHAIFQRLTEDFVF 203
++ + + IDC+ G G +I SL++++ DL+ DA+++++VEK A F RL+ED +
Sbjct: 207 TFRD-DGDFIDCTKMGVGGKAIP---SLIDRITDLQGDAQFVLLVEKDAAFMRLSEDRFY 262
Query: 204 NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
NQ P I+ITA+G PD++TR L+ + ++PIL LVD +P GL IL + GS M
Sbjct: 263 NQYPCIIITARGQPDVSTRLFLNMVKTRL-NIPILGLVDSDPYGLKILSVYLSGSKNMSY 321
Query: 264 E-AYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSL 320
+ A ++KWLG + L + D++ + L+ + ++ N + EL L
Sbjct: 322 DSASLTTSDIKWLG-----------ECRLDMTESDIKYGQDLLKEDFIKNNPAWMAELEL 370
Query: 321 MVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
M+ ++AE++AL G+ YL + Y+ K+ Q D+I
Sbjct: 371 MLKTKEKAEIQALSNFGFQYLTQTYLPLKLQQGDWI 406
>gi|355563008|gb|EHH19570.1| hypothetical protein EGK_02264 [Macaca mulatta]
gi|355784368|gb|EHH65219.1| hypothetical protein EGM_01949 [Macaca fascicularis]
Length = 407
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 183/323 (56%), Gaps = 29/323 (8%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITA-----------KGYPD 218
+ +L TDA+++++VEK A FQRL +D N++ P I+IT+ KG PD
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITSTPGFQHLKSKGKGVPD 265
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGL 277
+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL
Sbjct: 266 LNTRLLVKKLWDTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGL 324
Query: 278 RGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEAL 333
D++ +P+ SL+PL RD S++ + Q +++E+ +M + +AE++AL
Sbjct: 325 LPSDLKRLNVPKDSLIPLTNRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQAL 384
Query: 334 YFHGYDYLGK-YIAKKIVQADYI 355
F DYL + Y+ K+ +I
Sbjct: 385 TFLSSDYLSRVYLPNKLKFGGWI 407
>gi|300796909|ref|NP_001180019.1| meiotic recombination protein SPO11 [Bos taurus]
gi|296480908|tpg|DAA23023.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
2 [Bos taurus]
Length = 395
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 179/312 (57%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K+ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKNFALILKIFSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ ++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTR--ATAVAVPSNI 206
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
++ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 207 QGIQ--NLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDVNTRLLIKKLW 264
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 265 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 323
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 324 KGTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 383
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 384 YLPNKLKFGGWI 395
>gi|147223337|emb|CAN13251.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 395
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 178/315 (56%), Gaps = 25/315 (7%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS---GYSIS 167
V+ I DV +L R SL I ++S+GL+AG L E + ++C AC ++ +I
Sbjct: 149 VVDNIINDVSCMLKVPRRSLHIFSTSKGLIAGNLRYIEEDGTKVNC-ACATAVAVPSNIQ 207
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLH 226
G +L+ TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+
Sbjct: 208 GIWNLI------TDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVK 261
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL- 284
+L F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++
Sbjct: 262 KLWDTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRL 320
Query: 285 -IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
IP+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL
Sbjct: 321 NIPKGTLIPLTKRDQMKLDSILKRPYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYL 380
Query: 342 GK-YIAKKIVQADYI 355
+ Y+ K+ +I
Sbjct: 381 SRVYLPNKLKFGGWI 395
>gi|426241227|ref|XP_004014493.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Ovis
aries]
Length = 395
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 180/312 (57%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKNFAIILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ ++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTR--ATAVAVPSNI 206
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
++ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 207 QGIQ--NLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLW 264
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 265 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 323
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 324 KGTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 383
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 384 YLPNKLKFGGWI 395
>gi|157427754|ref|NP_001098783.1| meiotic recombination protein SPO11 [Sus scrofa]
gi|147223336|emb|CAN13250.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 357
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 178/312 (57%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I DV +L R SL I ++S+GL+AG L E + ++C AC ++ ++
Sbjct: 111 VVDNIINDVSCMLKVPRRSLHIFSTSKGLIAGNLRYIEEDGTKVNC-ACATA---VAVPS 166
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
++ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 167 NIQGIWNLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLW 226
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 227 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 285
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 286 KGTLIPLTKRDQMKLDSILKRPYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 345
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 346 YLPNKLKFGGWI 357
>gi|296480907|tpg|DAA23022.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
1 [Bos taurus]
Length = 357
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 179/312 (57%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K+ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVKNFALILKIFSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ ++ ++ ++
Sbjct: 111 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTR--ATAVAVPSNI 168
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
++ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 169 QGIQ--NLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDVNTRLLIKKLW 226
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 227 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 285
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 286 KGTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 345
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 346 YLPNKLKFGGWI 357
>gi|426241229|ref|XP_004014494.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Ovis
aries]
Length = 357
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 180/312 (57%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVKNFAIILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ ++ ++ ++
Sbjct: 111 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTR--ATAVAVPSNI 168
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
++ +L TDA+++++VEK A FQRL +D N++ P I++T KG PD+ TR L+ +L
Sbjct: 169 QGIQ--NLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLW 226
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 227 DTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 285
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q +++E+ +M + +AE++AL F DYL +
Sbjct: 286 KGTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 345
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 346 YLPNKLKFGGWI 357
>gi|149030043|gb|EDL85135.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 306
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 172/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++ ++ F + K++ ++++ T+R+++Y + F +Q V
Sbjct: 5 CTTRKIKSDSLRSVRKFALILKILSMIYKLIQSNTYATKRDIYYT----ESQLFRNQAAV 60
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C C ++ ++ ++
Sbjct: 61 DSIIDDISCMLKVPRRSLHVISTSKGLIAGNLRYVEEDGTQVQC-MCSATATAVPSNIQG 119
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ +L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 120 MQ--NLVTDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDT 177
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP+
Sbjct: 178 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKD 236
Query: 289 SLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL RD S++ + + +K+E+ ++ + +AE++AL F DYL + Y+
Sbjct: 237 SLIPLTRRDQMKLDSILRRPYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYL 296
Query: 346 AKKI 349
K+
Sbjct: 297 PNKL 300
>gi|149030042|gb|EDL85134.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 316
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 172/304 (56%), Gaps = 18/304 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT KS++ ++ F + K++ ++++ T+R+++Y + F +Q V
Sbjct: 15 CTTRKIKSDSLRSVRKFALILKILSMIYKLIQSNTYATKRDIYYT----ESQLFRNQAAV 70
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C C ++ ++ ++
Sbjct: 71 DSIIDDISCMLKVPRRSLHVISTSKGLIAGNLRYVEEDGTQVQC-MCSATATAVPSNIQG 129
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ +L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 130 MQ--NLVTDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDT 187
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP+
Sbjct: 188 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKD 246
Query: 289 SLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL RD S++ + + +K+E+ ++ + +AE++AL F DYL + Y+
Sbjct: 247 SLIPLTRRDQMKLDSILRRPYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYL 306
Query: 346 AKKI 349
K+
Sbjct: 307 PNKL 310
>gi|395829244|ref|XP_003787770.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Otolemur
garnettii]
Length = 396
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 175/310 (56%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
C KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 95 CITRKVKSDSPKSIQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQTIV 150
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I+++S+GL+AG L E + ++C+ G++ ++ ++
Sbjct: 151 DNIISDISCMLKVPRRSLHIISTSKGLIAGNLRYIEEDGTKVNCTG-GATAVAVPSNIQG 209
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 210 IR--NLITDAKFLLIVEKDATFQRLLDDNFCKKMSPCIMVTGKGVPDLNTRLLVKKLWDT 267
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP+
Sbjct: 268 F-RTPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDLKRLNIPKD 326
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL + Y+
Sbjct: 327 SLIPLTKRDQMKLDSILQRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 386
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 387 PNKLRFGGWI 396
>gi|395829242|ref|XP_003787769.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Otolemur
garnettii]
Length = 358
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 175/310 (56%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
C KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q V
Sbjct: 57 CITRKVKSDSPKSIQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQTIV 112
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I+++S+GL+AG L E + ++C+ G++ ++ ++
Sbjct: 113 DNIISDISCMLKVPRRSLHIISTSKGLIAGNLRYIEEDGTKVNCTG-GATAVAVPSNIQG 171
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 172 IR--NLITDAKFLLIVEKDATFQRLLDDNFCKKMSPCIMVTGKGVPDLNTRLLVKKLWDT 229
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP+
Sbjct: 230 F-RTPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDLKRLNIPKD 288
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL + Y+
Sbjct: 289 SLIPLTKRDQMKLDSILQRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 348
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 349 PNKLRFGGWI 358
>gi|149734128|ref|XP_001489976.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Equus
caballus]
Length = 395
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 176/312 (56%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYTTKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I DV +L R SL I+++S+GL+AG L E + + CS ++ ++ ++
Sbjct: 149 VVDSIITDVSCMLKVPRRSLHILSTSKGLIAGNLRYIEEDGTKVYCSC--TTAVAVPSNI 206
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D F P +++T KG PD+ TR L+ +L
Sbjct: 207 QGI--WNLITDAKFLLIVEKDATFQRLLDDNFCSRMSPCVIVTGKGVPDLNTRLLVKKLW 264
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +PI LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 265 DVF-HVPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 323
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q ++ E+ +M ++ +AE++AL F DYL +
Sbjct: 324 KDALIPLTKRDQMKLDSILKRPYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRV 383
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 384 YLPNKLKFGGWI 395
>gi|345328313|ref|XP_003431261.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein
SPO11-like [Ornithorhynchus anatinus]
Length = 396
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 174/312 (55%), Gaps = 18/312 (5%)
Query: 54 SFCTRSLTKSNAA---KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S C+ KS++A + F + K++ ++++ T+R+++Y + + F +Q
Sbjct: 93 SHCSTRKVKSDSAITAQKFALILKMLSVVYKLVQSNTYATKRDIYYTNI----QLFGNQS 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L R +L I+++S+GL++G L E + ++C+ C S+ ++S ++
Sbjct: 149 VVDNIISDISCMLKVPRRNLHILSTSKGLISGNLSYTEEDGTKVNCT-CSSTAVAVSPNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+YI++VEK A FQRL +D F P I+IT KG PD+ TR ++ +L
Sbjct: 208 HGIR--NLITDAKYILIVEKDATFQRLLDDNFCHKMSPCIMITGKGVPDLNTRLMIKKLW 265
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 266 DTF-HIPVFTLVDADPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIERLNIP 324
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL D SL + Q +K+E+ +M + +AE++ L DYL +
Sbjct: 325 KDTLIPLTKHDQTKLDSLQKRPYIDHQPFWKKEMEIMAASRMKAEIQVLTSLAPDYLSRV 384
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 385 YLLNKLKFGGWI 396
>gi|149734130|ref|XP_001490003.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Equus
caballus]
Length = 357
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 176/312 (56%), Gaps = 19/312 (6%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 55 SHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYTTKRDIYYT---DS-QLFGNQT 110
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I DV +L R SL I+++S+GL+AG L E + + CS ++ ++ ++
Sbjct: 111 VVDSIITDVSCMLKVPRRSLHILSTSKGLIAGNLRYIEEDGTKVYCSC--TTAVAVPSNI 168
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLN 229
+ +L TDA+++++VEK A FQRL +D F P +++T KG PD+ TR L+ +L
Sbjct: 169 QGI--WNLITDAKFLLIVEKDATFQRLLDDNFCSRMSPCVIVTGKGVPDLNTRLLVKKLW 226
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
F +PI LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D++ IP
Sbjct: 227 DVF-HVPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIP 285
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD S++ + Q ++ E+ +M ++ +AE++AL F DYL +
Sbjct: 286 KDALIPLTKRDQMKLDSILKRPYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRV 345
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 346 YLPNKLKFGGWI 357
>gi|167526605|ref|XP_001747636.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774082|gb|EDQ87716.1| predicted protein [Monosiga brevicollis MX1]
Length = 407
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 187/357 (52%), Gaps = 40/357 (11%)
Query: 34 SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
S + +Q + ++ I L ++ TR+ ++ + + +V + Q++ + VT+R+
Sbjct: 56 SRANNNQKYIPELDRIVLLNAVKTRAFDSLSSVRKTAIMTRVFQLIHQVVRKRIHVTKRD 115
Query: 94 LFY---KLLCDSPE---YFTSQL----------------------QVNRTIQDVIALLHC 125
LFY KL E + +Q Q + + DV ++ C
Sbjct: 116 LFYTDVKLFTKQEEVGCFIAAQRLYVWPAANLLASRVLPWLRLVPQSDAVLDDVACMVGC 175
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL-DLKTDARY 184
+R SL +VAS +G+V G + E + + IDC+ G G +I SL+ K+ D+K A++
Sbjct: 176 TRTSLNVVASDKGVVVGCVTFLE-DGDFIDCTRMGVGGKAIP---SLVNKITDIKGTAQF 231
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
+++VEK A F RL ED + + P +++T KG PD+ TR + + A ++PIL L D +
Sbjct: 232 VLLVEKEAAFMRLAEDRFYQRYPCVIVTGKGQPDVGTRQFVRAVKDAL-NVPILGLFDSD 290
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIA 301
P GL IL + S M ++ C ++KWLGLR D+ IPEQ LP+ D++
Sbjct: 291 PYGLKILSVYMSSSKNMSYDSASLTCPDIKWLGLRPTDLDRYKIPEQCRLPMTAEDIETG 350
Query: 302 RSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
R L+ ++ + +N + +EL LM+ +AE++AL G+ YL + Y+ +K+ + D+I
Sbjct: 351 RRLLQADFITKNEAWVKELRLMLDTKVKAEIQALSNFGFQYLTEVYLPQKLERGDWI 407
>gi|148674665|gb|EDL06612.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_b [Mus musculus]
Length = 310
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 170/304 (55%), Gaps = 22/304 (7%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ K+ F + KV+ ++++ + T+R+++Y DS + F +Q V
Sbjct: 13 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 68
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 69 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 127
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ A+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 128 MQH------AKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 181
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 182 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 240
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +K+EL +M + +AE++AL DYL + Y+
Sbjct: 241 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 300
Query: 346 AKKI 349
K+
Sbjct: 301 PNKL 304
>gi|5453474|gb|AAD43589.1|AF163054_1 meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
gi|5453483|gb|AAD43592.1| meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
Length = 354
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 170/304 (55%), Gaps = 22/304 (7%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ K+ F + KV+ ++++ + T+R+++Y DS + F +Q V
Sbjct: 57 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 112
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++ ++ ++
Sbjct: 113 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 171
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ A+++++VEK A FQRL +D F P I++T KG PD+ TR L+ +L
Sbjct: 172 MQH------AKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 225
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D+Q IP+
Sbjct: 226 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 284
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL D S++ + Q +K+EL +M + +AE++AL DYL + Y+
Sbjct: 285 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 344
Query: 346 AKKI 349
K+
Sbjct: 345 PNKL 348
>gi|332207876|ref|XP_003253022.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein SPO11
[Nomascus leucogenys]
Length = 420
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 162/272 (59%), Gaps = 15/272 (5%)
Query: 91 QRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
R+++Y DS + F +Q V+ I DV +L SR SL I+++S+GL+AG L E +
Sbjct: 157 HRDIYYT---DS-QLFGNQTVVDNIINDVSCMLKVSRRSLHILSTSKGLIAGNLRYIEED 212
Query: 151 QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSI 209
++C+ CG++ ++ ++ + +L TDA+++++VEK A FQRL +D N++ P I
Sbjct: 213 GTKVNCT-CGATAVAVPSNIQGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCI 269
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
+IT KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 270 MITGKGVPDLNTRLLVKKLWDTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLT 328
Query: 270 C-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHN 324
++WLGL D++ +P+ SL+PL RD S++ + Q +++E+ +M +
Sbjct: 329 VPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADS 388
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+AE++AL F DYL + Y+ K+ +I
Sbjct: 389 KMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 420
>gi|291415677|ref|XP_002724077.1| PREDICTED: meiotic recombination protein SPO11 [Oryctolagus
cuniculus]
Length = 395
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 171/310 (55%), Gaps = 18/310 (5%)
Query: 56 CTRSLTKSNA---AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +S++ A F + K++ ++++ T+R+++Y DS + F SQ V
Sbjct: 94 CTTRKVRSDSQRSAHKFALILKILSMIYKLVQSNTYATKRDIYYM---DS-QLFGSQTVV 149
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ I D+ +L R SL I ++S+GL+AG L E + + C+ CG++ ++ ++
Sbjct: 150 DSIIDDISCMLKVPRRSLHISSTSKGLIAGNLSYVEEDGTRVSCT-CGATVVAVPSNIQG 208
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ +L TDA+++++VEK A FQRL +D F P I++T KG PD++TR L+ +L
Sbjct: 209 IR--NLITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLSTRLLVKKLWDT 266
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
F +P LVD +P G+ I+C +K+GS+ M EA+ V+WLGL DV +P+
Sbjct: 267 F-HIPAFTLVDADPHGIEIMCIYKYGSMSMCFEAHHLTVPAVRWLGLLPSDVSRLHVPKD 325
Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
SL+PL RDL S++ + Q ++ E+ M + +A ++AL DYL + Y+
Sbjct: 326 SLIPLTKRDLMKLDSILKRPYIACQPLWRAEMEAMASSKVKAGIQALTVLSADYLSRVYL 385
Query: 346 AKKIVQADYI 355
K+ +I
Sbjct: 386 PNKLKSGGWI 395
>gi|148674668|gb|EDL06615.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_e [Mus musculus]
Length = 327
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 170/313 (54%), Gaps = 23/313 (7%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLC---------DSP 103
CT +S++ K+ F + KV+ ++++ + T+R + +L
Sbjct: 13 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRSNAHSVLTLHLHRDIYYTDS 72
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSG 163
+ F +Q V+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++
Sbjct: 73 QLFGNQAAVDSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATA 131
Query: 164 YSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATR 222
++ ++ ++ L TDA+++++VEK A FQRL +D F P I++T KG PD+ TR
Sbjct: 132 TAVPTNIQGMQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTR 189
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD 281
L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL D
Sbjct: 190 LLVKKLWDTF-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSD 248
Query: 282 VQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHG 337
+Q IP+ SL+PL D S++ + Q +K+EL +M + +AE++AL
Sbjct: 249 IQRLNIPKDSLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLS 308
Query: 338 YDYLGK-YIAKKI 349
DYL + Y+ K+
Sbjct: 309 SDYLSRVYLPNKL 321
>gi|145312272|ref|NP_001077428.1| meiotic recombination protein SPO11 isoform c [Mus musculus]
gi|5733397|gb|AAD49561.1|AF126400_1 SPO11 protein [Mus musculus]
gi|9367040|gb|AAF87094.1|AF167439_1 SPO11b [Mus musculus]
Length = 371
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 172/314 (54%), Gaps = 25/314 (7%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLC----------DS 102
CT +S++ K+ F + KV+ ++++ + T+R + +L DS
Sbjct: 57 CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRSNAHSVLTLHLHRDIYYTDS 116
Query: 103 PEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS 162
+ F +Q V+ I D+ +L R SL ++++S+GL+AG L E + + C+ C ++
Sbjct: 117 -QLFGNQAAVDSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSAT 174
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIAT 221
++ ++ ++ L TDA+++++VEK A FQRL +D F P I++T KG PD+ T
Sbjct: 175 ATAVPTNIQGMQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNT 232
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGD 280
R L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WLGL
Sbjct: 233 RLLVKKLWDTF-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPS 291
Query: 281 DVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFH 336
D+Q IP+ SL+PL D S++ + Q +K+EL +M + +AE++AL
Sbjct: 292 DIQRLNIPKDSLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLL 351
Query: 337 GYDYLGK-YIAKKI 349
DYL + Y+ K+
Sbjct: 352 SSDYLSRVYLPNKL 365
>gi|432865769|ref|XP_004070604.1| PREDICTED: meiotic recombination protein SPO11 [Oryzias latipes]
Length = 399
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 190/355 (53%), Gaps = 21/355 (5%)
Query: 3 ARIEVSVINFLKILNSPDPAISDLPLINRKS-SNSRVSQGLLTDVSWIFLSHSFCTRSLT 61
+RIE ++ ++ L+ + + +LP NR S SN G+ +S HS T
Sbjct: 52 SRIESVILRIVESLSKNEAPVLELP--NRSSWSNVDFDSGVGLQMS---SGHSVTTVKSN 106
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
+ F ++ K++ ++++ T+R+++Y ++ + F SQ V+ + D+
Sbjct: 107 CPASVTKFAQILKILSVIYRLVQSNSYATKRDVYY----NNTQLFGSQRSVDTIVDDISC 162
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
+L SR +L ++A+S+GL+AG L E + IDC + ++ S + ++ +
Sbjct: 163 MLKVSRRALHVMATSKGLIAGDLCYLEEDGTRIDCRSSSAAVSVSSNVSGI---RNIVSS 219
Query: 182 ARYIIVVEKHAIFQR-LTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
A+++++VEK A FQR L +DF P I+IT KG PD+ +R ++ +L +PI AL
Sbjct: 220 AKFVMIVEKDATFQRLLNDDFCRKLSPCIMITGKGVPDVNSRLMVKKLWDTL-QIPIFAL 278
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRD 297
VD +P G I+C +K+GS+ M EA+ +V WLGL D+Q ++P++SLLPL RD
Sbjct: 279 VDADPHGFEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLMVPKRSLLPLTRRD 338
Query: 298 LQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
SL+ Q +++E+ LM + +AE+++L D+L Y+ K+
Sbjct: 339 ENKLNSLLKRPYFASQPQWQKEMELMQQSKVKAEIQSLADIAPDFLTSIYLPNKL 393
>gi|443684396|gb|ELT88325.1| hypothetical protein CAPTEDRAFT_89794 [Capitella teleta]
Length = 364
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 25/365 (6%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNS---RVSQGLLTDVSWIFLSHSFCT 57
V R+E V + + ++ +P I L NR + N+ S+GL+ + S S T
Sbjct: 15 VLRRVEAVVASVIDSVSKNEPPI--LVSHNRTTWNNISFDPSKGLVMN-----YSPSVKT 67
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
L +N+A+ F KV+ Q++ + T+REL+Y+ + + F Q ++ +
Sbjct: 68 IRLNSANSAQKFALTMKVLSKVHQLVRTDTFCTKRELYYQDV----KLFPGQSTLDDIVD 123
Query: 118 DVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD 177
DV +L R++L I+A+S+GLVAG L + E IDCS+ G +G I + + +
Sbjct: 124 DVACMLQVPRWNLHILATSKGLVAGDLFFTSGDGEHIDCSSTG-TGVLIPNHVQGIS--N 180
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRAFPDLP 236
L+T+A +++VVEK A FQ L + + + P ILIT KG+PD+ TR + L + F LP
Sbjct: 181 LQTEAEFVLVVEKDATFQLLLDQKLRQYVGPHILITGKGFPDVNTRLFVRLLWQHF-RLP 239
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ-LIPEQS-LLPL 293
L LVD +P GL I+ T+K+GS EA +++WLG+ +VQ LIP + L+ L
Sbjct: 240 TLCLVDADPHGLEIMSTYKYGSKAQSFEANHLTVPSLRWLGILPSEVQRLIPSTNGLMQL 299
Query: 294 KPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIV 350
RD++ A L++ L Q +K E+ ++ +AE++ L D+L Y+ KI
Sbjct: 300 TERDIKKANELLTRPYLSAQPLWKTEIEYLIKTKMKAEIQCLSQIAIDFLSNIYLPNKIR 359
Query: 351 QADYI 355
+ ++
Sbjct: 360 NSSWL 364
>gi|440912496|gb|ELR62058.1| Meiotic recombination protein SPO11 [Bos grunniens mutus]
Length = 408
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 176/329 (53%), Gaps = 40/329 (12%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K+ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSVKNFALILKIFSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS---------ACGS 161
V+ I D+ +L R SL I+++S+GL+AG L E + ++C+ +C S
Sbjct: 149 VVDNIINDISCMLKVPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTRATVSIIMCSCAS 208
Query: 162 SGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILIT-------- 212
+ Y L L TDA+++++VEK A FQRL +D N++ P I++T
Sbjct: 209 TPYQ--------THLYLITDAKFLLIVEKDATFQRLLDDNFCNKMSPCIMVTVYYLLLPQ 260
Query: 213 AKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-N 271
KG PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+
Sbjct: 261 GKGVPDLNTRLLIKKLWDTF-HIPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPA 319
Query: 272 VKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQR 327
++WLGL D++ IP+ +L+PL RD S++ + Q +++E+ +M + +
Sbjct: 320 IRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKRPYITCQPFWRKEMEIMADSKMK 379
Query: 328 AEVEALYFHGYDYLGK-YIAKKIVQADYI 355
AE++AL F DYL + Y+ K+ +I
Sbjct: 380 AEIQALTFLSSDYLSRVYLPNKLKFGGWI 408
>gi|348502949|ref|XP_003439029.1| PREDICTED: meiotic recombination protein SPO11-like [Oreochromis
niloticus]
Length = 390
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 174/312 (55%), Gaps = 27/312 (8%)
Query: 54 SFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVN 113
S C S+TK F ++ K++ ++++ T+R+++Y ++ + F SQ V+
Sbjct: 96 SDCPSSVTK------FAQILKILSVIYRLVQSNSYATKRDIYY----NNTKLFGSQKAVD 145
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY---SISGDL 170
+ D+ +L R SL ++A+S+GL++G L E + IDC++ ++ +ISG
Sbjct: 146 SIVDDISCMLKVPRRSLHVLATSKGLISGDLCYMEEDGTRIDCNSSSTAVSVSSNISGIK 205
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
+++ + A++++++EK A FQRL +DF P I+IT KG PD+ +R ++ RL
Sbjct: 206 NIV------SSAKFVMIIEKDATFQRLLDDDFCTKLSPCIIITGKGVPDVNSRLMVKRLW 259
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIP 286
+PI ALVD +P G+ I+C +K+GS+ M EA+ +V WLGL D+Q +P
Sbjct: 260 DEL-HIPIFALVDADPHGIEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVP 318
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
+ +L+PL RD SL+ L Q +++E+ LM N +AE+++L D+L +
Sbjct: 319 KDALIPLTKRDESKLCSLLERPYLTSQPEWEKEMKLMQQNKVKAEIQSLTAIAPDFLTQI 378
Query: 344 YIAKKIVQADYI 355
Y+ K+ +I
Sbjct: 379 YLPNKLRYGGWI 390
>gi|428170368|gb|EKX39294.1| Spo11-3/Rhl2/Bin5/Top6A3 vegetative topoisomerase VIA [Guillardia
theta CCMP2712]
Length = 385
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 170/328 (51%), Gaps = 26/328 (7%)
Query: 40 QGLLTDVSWI------FLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
+G T+V ++ +L + R S+ K + ++M+ ++ + T+R+
Sbjct: 72 RGSATNVQFVPELDRNYLEYKAMKRQFADSSQVKRTTMMTRLMQLVHELAKKNIHSTKRD 131
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + F Q + ++++ + C+R SL + AS +GLV GRL + + +
Sbjct: 132 LFYA----DVKLFEKQQNSDAVLEELSLMFGCTRHSLQVTASEKGLVVGRLQFND-DDDF 186
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
IDC+ G SG +I S L++ A +I++VEK A FQRL ED +N P ++IT
Sbjct: 187 IDCTKMGRSGKNIP---SFLDR-----PAEFILLVEKDAAFQRLAEDRFYNTYPCVIITG 238
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG D+ATR L R+ A +PIL L D + GL IL + GS M ++ A ++
Sbjct: 239 KGEADLATRMFLRRVKDALK-IPILGLFDSDAHGLKILSVYMQGSEAMSHDSANLATPDI 297
Query: 273 KWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRA 328
KWLG+R D+ +P + L L D+ A SL +Q+ + +EL ++ ++A
Sbjct: 298 KWLGVRPSDLDKYNVPRECRLELTTHDVSFAESLKEKPYIQKRSAWVKELETLLSRKEKA 357
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E++A G+ YL + Y+ +K+ + D++
Sbjct: 358 EIQAFTSKGFQYLTQEYLPRKLREGDWV 385
>gi|149030041|gb|EDL85133.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 321
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 172/319 (53%), Gaps = 33/319 (10%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQ---------------RELFYK 97
CT KS++ ++ F + K++ ++++ T+ R+++Y
Sbjct: 5 CTTRKIKSDSLRSVRKFALILKILSMIYKLIQSNTYATKSPGARAHSVLTLHLHRDIYYT 64
Query: 98 LLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ F +Q V+ I D+ +L R SL ++++S+GL+AG L E + + C
Sbjct: 65 ----ESQLFRNQAAVDSIIDDISCMLKVPRRSLHVISTSKGLIAGNLRYVEEDGTQVQC- 119
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGY 216
C ++ ++ ++ ++ +L TDA+++++VEK A FQRL +D F P I++T KG
Sbjct: 120 MCSATATAVPSNIQGMQ--NLVTDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGT 177
Query: 217 PDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWL 275
PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WL
Sbjct: 178 PDLNTRLLVKKLWDTF-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWL 236
Query: 276 GLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVE 331
GL D++ IP+ SL+PL RD S++ + + +K+E+ ++ + +AE++
Sbjct: 237 GLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRRPYITYHPFWKKEMEMLADSKTKAEIQ 296
Query: 332 ALYFHGYDYLGK-YIAKKI 349
AL F DYL + Y+ K+
Sbjct: 297 ALSFLSSDYLSRVYLPNKL 315
>gi|157818345|ref|NP_001102434.1| meiotic recombination protein SPO11 [Rattus norvegicus]
gi|149030040|gb|EDL85132.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 331
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 172/319 (53%), Gaps = 33/319 (10%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQ---------------RELFYK 97
CT KS++ ++ F + K++ ++++ T+ R+++Y
Sbjct: 15 CTTRKIKSDSLRSVRKFALILKILSMIYKLIQSNTYATKSPGARAHSVLTLHLHRDIYYT 74
Query: 98 LLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ F +Q V+ I D+ +L R SL ++++S+GL+AG L E + + C
Sbjct: 75 ----ESQLFRNQAAVDSIIDDISCMLKVPRRSLHVISTSKGLIAGNLRYVEEDGTQVQC- 129
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGY 216
C ++ ++ ++ ++ +L TDA+++++VEK A FQRL +D F P I++T KG
Sbjct: 130 MCSATATAVPSNIQGMQ--NLVTDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGT 187
Query: 217 PDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWL 275
PD+ TR L+ +L F +P+ LVD +P G+ I+C +K+GS+ M EA+ ++WL
Sbjct: 188 PDLNTRLLVKKLWDTF-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWL 246
Query: 276 GLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVE 331
GL D++ IP+ SL+PL RD S++ + + +K+E+ ++ + +AE++
Sbjct: 247 GLLPSDIKRLNIPKDSLIPLTRRDQMKLDSILRRPYITYHPFWKKEMEMLADSKTKAEIQ 306
Query: 332 ALYFHGYDYLGK-YIAKKI 349
AL F DYL + Y+ K+
Sbjct: 307 ALSFLSSDYLSRVYLPNKL 325
>gi|390348826|ref|XP_780029.3| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Strongylocentrotus purpuratus]
Length = 402
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 161/276 (58%), Gaps = 14/276 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
+ F + KV+ C++++ + T+R+L+Y + F SQ V+ I ++ LL
Sbjct: 112 TSTNRFTLMLKVLALCYRLVQTDTYSTKRDLYYS----DVQSFGSQSIVDDIIDNLCCLL 167
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
R L ++A+S+GLV G L + + IDCS +G ++ + + ++ + A+
Sbjct: 168 QVPRRCLHVLATSKGLVYGDLCFTDASGSYIDCSN-NRTGTQVTNHVGGIS--NIHSHAK 224
Query: 184 YIIVVEKHAIFQRLTEDFVFNQIPS-ILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
+++++EK A FQ++ +D + +++ + I+IT KG+PDI TR ++ +L +P+ ALVD
Sbjct: 225 FVLIIEKDATFQKIIDDGLMDRMRNCIIITGKGFPDINTRMMVRKLWDTL-HIPVFALVD 283
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQ 299
+P GLAIL +KFGS + E++ +++WLG+ DV+ IPE++L+PL P DL+
Sbjct: 284 ADPHGLAILFVYKFGSRSLSYESHSLTVPSIRWLGVLPSDVKGLRIPEKALVPLSPSDLK 343
Query: 300 IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEAL 333
A LM +E + EL M+H+G +AE+++L
Sbjct: 344 KASHLMRRPFYKELPQWMSELQEMLHSGYKAEIQSL 379
>gi|156392691|ref|XP_001636181.1| predicted protein [Nematostella vectensis]
gi|156223282|gb|EDO44118.1| predicted protein [Nematostella vectensis]
Length = 405
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 165/299 (55%), Gaps = 15/299 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N+ F +++ C +L +++ T+R+++Y +F +Q V+ + ++ +L
Sbjct: 115 NSIGKFATTIRILSICQNLLQEDRFATKRDVYYT----DTVFFGNQNVVDDIVDNLSCML 170
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
R SL I+ASS+GL++G + +E + +DC+ C + G ++S + + DL +DA+
Sbjct: 171 EVPRHSLRILASSKGLISGHVRYREYDGTYVDCT-CLTRGVAVSSHVDGI--YDLYSDAK 227
Query: 184 YIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
++VVEK A + RL +D + ++ P I+IT KGYPD+ TR ++HRL +P++ALVD
Sbjct: 228 VVLVVEKEATYHRLLDDGLLEKLNPCIMITGKGYPDVNTRQMVHRLWCTL-HVPVMALVD 286
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQ 299
+P G+ IL +K+GS + + ++WLG+ +V IPE +PL RD
Sbjct: 287 ADPHGIEILSVYKYGSKALSFNVHDLTVPTIRWLGVWPSEVDRLSIPEHVRIPLTERDRS 346
Query: 300 IARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+L+ + + +++E+ M+ G +AE++AL +L YIA KI +I
Sbjct: 347 KCHALLKRPFMDSHPAWRQEIEHMLTKGYKAEMQALSTIATSFLSDTYIALKIRNGRWI 405
>gi|224061220|ref|XP_002300376.1| predicted protein [Populus trichocarpa]
gi|222847634|gb|EEE85181.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 162/320 (50%), Gaps = 24/320 (7%)
Query: 52 SHSFCTRSLTKSNAAKAFVR---------VWKVMETCFQILSQEKRVTQRELFYKLLCDS 102
S+ C+ L K R + +V+ ++L + + ++R+++Y
Sbjct: 47 SNCLCSSDLPKGQQVLTLTRQCHACRIDVLLRVLVIVQKLLQENRHGSKRDIYYM----H 102
Query: 103 PEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS 162
P F+ Q V+R I D+ LL CSR +L +V+ GLV G L E ++ DC + ++
Sbjct: 103 PSVFSEQSVVDRAINDICILLQCSRHNLNVVSVGNGLVMGWLQFLEAGRK-FDCISSPTT 161
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
Y+I + + E D+ + A YI++VEK ++FQRL D N I+IT +GYPDI TR
Sbjct: 162 AYTIP--VHVEEVKDIVSVANYILIVEKESVFQRLANDKFCNANRCIVITGRGYPDIPTR 219
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDD 281
L L LP+ LVD +P G IL T++FGS+ M +A V+WLG D
Sbjct: 220 RFLRLLVEKLC-LPVYCLVDCDPYGFDILTTYRFGSMQMAYDAKILRVPEVQWLGAFPSD 278
Query: 282 VQL--IPEQSLLPLKPRDLQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFH 336
+ +P+Q LLPL D + +++ LQ+ E EL LM+ G + E+EA H
Sbjct: 279 FEKYDLPQQCLLPLTAEDKRRTETMLLRCYLQKEVPEWRLELELMLQKGVKFEIEAFSVH 338
Query: 337 GYDYLG-KYIAKKIVQADYI 355
+L +YI KI + + +
Sbjct: 339 TLSFLSEQYIPSKIPKVEVL 358
>gi|47229338|emb|CAG04090.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 193/361 (53%), Gaps = 30/361 (8%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVS----QGL-LTDVSWIFLSHSF 55
V RIE ++ + L+ + + LP +SS + VS GL +T + + S
Sbjct: 2 VLERIESIILGIVTSLSKDEAPVLVLP---NRSSWANVSFDGSVGLQMTSENSVISIRSN 58
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
C+ S+TK F + K++ ++++ T+R+++Y ++ + F SQ V+
Sbjct: 59 CSSSVTK------FAQTVKILSVIYRLVQSNSFATKRDIYY----NNTQLFGSQKSVDSI 108
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEK 175
+ D+ LL R +L ++A+S+GL++G L E + I+C++ S ++S ++ +
Sbjct: 109 VDDISCLLKVPRRALHVLATSKGLISGDLCYMEEDGTRIECNS--SQAVAVSSNIGGIR- 165
Query: 176 LDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD 234
++ + A+++++VEK A FQRL +D F P I+IT KG PD+ +R ++ +L
Sbjct: 166 -NIVSSAKFVLIVEKDATFQRLLDDGFCTKLSPCIIITGKGVPDVNSRLMVRKLWDTL-H 223
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLL 291
+PI ALVD +P G+ I+C +K+GS+ M EA+ +V WLGL D+Q +P+ LL
Sbjct: 224 IPIFALVDADPHGIEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPQDVLL 283
Query: 292 PLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKK 348
PL RD SL+ L Q ++ E+ L+ +AE+++L D+L Y+ K
Sbjct: 284 PLTRRDECKLASLLKRPYLTRQPEWRREMELIQQTKVKAEIQSLSAIAPDFLTNIYLPNK 343
Query: 349 I 349
+
Sbjct: 344 L 344
>gi|258549085|ref|XP_002585415.1| topoisomerase, putative [Plasmodium falciparum 3D7]
gi|254922468|gb|ACT83903.1| topoisomerase, putative [Plasmodium falciparum 3D7]
Length = 336
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 192/343 (55%), Gaps = 30/343 (8%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAF------------VRVWKVM 76
+N+KS + +L SW FL + + K+NA K + R V+
Sbjct: 7 VNKKSILEAIEDFVLHIFSW-FLDINV---DIFKNNADKKYSIKLFDKKLINLCRTVSVV 62
Query: 77 ETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASS 136
E +I+ ++K TQRE++YK F Q Q N+ I+DV +L R SL I AS
Sbjct: 63 ELVNEIIMKDKNCTQREIYYKFY----NIFREQNQANKHIKDVCNILGYERSSLNIHASE 118
Query: 137 RGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQR 196
+G +AG L+L++ E+++ S +G I+ L ++K++ + A YIIVVEK++++Q+
Sbjct: 119 KGCIAGLLILKKG-YEILNLSE-HENGIMINEFLLNVDKIE--SMANYIIVVEKYSVYQK 174
Query: 197 LTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKF 256
L E+ ++N +PSILIT KG+PD++TR ++ L F L + + D++P G+ I +K
Sbjct: 175 LCENKIWNILPSILITGKGFPDLSTRKIICELMHTFQ-LECVYVGDFDPHGIKIYLNYKE 233
Query: 257 GSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSE--ILQEN 313
G I + YAC N+KW+G+ +D+ P++SL+ L ++ I ++L +++ +
Sbjct: 234 G-IKSNDKNNLYACKNMKWIGMCSNDIVFFPKESLISLTKKEKNILQNLKNNKKFLSTSQ 292
Query: 314 YKEELSLMVHNGQRAEVEALYFHGYD-YLGKYIAKKIVQADYI 355
K E+ M + E+EA+ + G D ++ KY+ KKI++ +++
Sbjct: 293 LKNEIIQMDRINYKFEIEAVQYLGMDFFIKKYLIKKILRKEWL 335
>gi|357620490|gb|EHJ72655.1| meiotic recombination protein spo11 [Danaus plexippus]
Length = 423
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 164/288 (56%), Gaps = 16/288 (5%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
V+ ++L++ VT+RELFY+ + F SQ++++ ++D LL + +SLG+VA
Sbjct: 144 VLTKIHELLTKNITVTRRELFYQ----NVSRFVSQIKLDTAVRDACCLLETTPWSLGVVA 199
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
+++GL+AG + + + V+DC+ G G I D+ + K + T A+YI++VEK AIF
Sbjct: 200 TAKGLIAGPIKMYNRDSSVLDCNVAG--GTLIPQDIVGITKFE--TTAKYILLVEKDAIF 255
Query: 195 QRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
Q+L ++ ++ P IL+T KGYPD+ TR LL+RL L LALVD +P G I T
Sbjct: 256 QKLLDEGALIRLGPVILLTGKGYPDVCTRQLLYRLVSEL-RLRALALVDADPHGYEIYLT 314
Query: 254 FKFGSIGMGMEAYRYAC-NVKWLGLRGDD-VQLIPEQSLLPLKPRDLQIARSLMSSEILQ 311
+K+GS+ + AC ++ LG R D + L+P + L L D + +L++ L
Sbjct: 315 YKYGSLAQSHLSDSLACTSLLLLGARYQDLMTLVPTAARLALTALDRRKLAALINRPYLN 374
Query: 312 ----ENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+ KE+L M+ G +AE+EA+ + YI KI+ AD++
Sbjct: 375 TPTGDPIKEDLKRMLERGLKAELEAVVPYSVAMSDSYIPSKIIAADFL 422
>gi|449486470|ref|XP_002195778.2| PREDICTED: meiotic recombination protein SPO11 [Taeniopygia
guttata]
Length = 407
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 166/292 (56%), Gaps = 15/292 (5%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
+A+ F + K++ ++++ T+R+++Y F SQ V++ I D+ +L
Sbjct: 118 SARRFALMLKILSMIYKMVQSNTYATKRDIYY----SDTLLFGSQSVVDQIINDISCMLK 173
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
R SL ++++++G VAG L E + ++C+ C ++ ++ ++ ++ +L + A++
Sbjct: 174 IPRGSLHVLSTTKGFVAGNLSYTEEDGTKVNCT-CSATAVTVPSNVQGIK--NLTSHAKF 230
Query: 185 IIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
I++VEK A FQRL +D FN++ P I+IT +G PD+ TR L+ +L +F +P+ L+D
Sbjct: 231 ILIVEKDATFQRLLDDNFFNKVSPCIMITGRGVPDLNTRLLVRKLWDSF-QIPVFTLMDA 289
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQI 300
+P G+ I+C +K+GS M EA+ +VKWLGL D++ I + +L+P +D
Sbjct: 290 DPHGVEIMCVYKYGSASMSFEAHHLTVPSVKWLGLLPSDLERLNIRKDALIPFTKQDENK 349
Query: 301 ARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
S+ + Q +K+EL +M + +AE++ L DYL + Y+ K+
Sbjct: 350 LASIQKRPYIACQPLWKKELEIMAASKLKAEIQVLTSVSSDYLSRVYLPNKL 401
>gi|302808746|ref|XP_002986067.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
gi|300146215|gb|EFJ12886.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
Length = 278
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 162/289 (56%), Gaps = 21/289 (7%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
+V++ +L Q K ++R+L+Y P+ Q VN+ + D+ L C+R SL +V
Sbjct: 3 RVLQIVQSLLQQGKHASKRDLYYT----DPD----QATVNQALIDISVRLKCTRSSLHVV 54
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
+ +GL+ G L ++ ++ IDCS C + ++I L L D+ + A YIIVVEK +
Sbjct: 55 SVGKGLIMGSLRFKDADR-TIDCSVC-NPFFNI---LFLDHHKDISSCAEYIIVVEKETV 109
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
FQRL D + I++T +GYPD+ATR L RL A +LP+ LVD +P GL IL T
Sbjct: 110 FQRLANDGFCRKNNCIVLTGRGYPDVATRSFL-RLLAAETNLPVYGLVDADPYGLDILAT 168
Query: 254 FKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL 310
++FGS M +A A +++WLG+ D Q +P++ LL L D + A ++++ + L
Sbjct: 169 YRFGSPTMAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLSLTNDDRRKAEAMLNRDYL 228
Query: 311 QE---NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ ++ ++L LM+ G + E+EAL + L YI KI A Y+
Sbjct: 229 KHLAFSWNQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKAAAYL 277
>gi|326932162|ref|XP_003212189.1| PREDICTED: meiotic recombination protein SPO11-like [Meleagris
gallopavo]
Length = 382
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 160/292 (54%), Gaps = 15/292 (5%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
A F + K++ ++++ T+R+++Y F SQ V+ I ++ +L
Sbjct: 93 TAPKFAMMLKILSMIYKMVQSNSYATKRDIYYS----DTLLFGSQRVVDDLINEISCMLQ 148
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
R SL I+++++G VAG L E + ++C++ G++ ++ ++ ++ +L + A++
Sbjct: 149 IPRRSLHILSTTKGFVAGNLSYTEEDGTKVNCTS-GATAVTVPSNVQGIK--NLYSHAKF 205
Query: 185 IIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
I++VEK A FQRL +D F P I+IT +G PD+ TR L+ +L F +PI LVD
Sbjct: 206 ILIVEKDATFQRLLDDEFCIKLAPCIMITGRGIPDLNTRLLVRKLWDTF-QIPIFTLVDA 264
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQL--IPEQSLLPLKPRDLQI 300
+P G+ I+C +K+GS+ M EA++ +KWLGL D++ I E L+P +D
Sbjct: 265 DPHGVEIMCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDIKRLNIREDILIPFTKQDQNK 324
Query: 301 ARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
SL + Q +KEEL +M + +AE++ L DYL + Y+ K+
Sbjct: 325 LTSLQKRPYIACQPAWKEELEIMAASKMKAEIQVLTSLSSDYLSRVYLPNKL 376
>gi|198425262|ref|XP_002129892.1| PREDICTED: similar to Spo11 [Ciona intestinalis]
Length = 385
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 193/364 (53%), Gaps = 23/364 (6%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSH-SFCTRS 59
+ +RIE V++ + +++ D P + ++ +S + L +V + + T S
Sbjct: 36 ILSRIEDEVVDLVHQISN-----GDSPWLQFRNRSSWKNAMYLPNVGLKLIEDPNLTTIS 90
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
+ F K++ ++++ + T+R+L+Y + P F+SQ V+ + D+
Sbjct: 91 FGNEGSVNKFGLTVKLLSMIYKLIQSGQVATKRDLYY----EEPNLFSSQSIVDHIVDDI 146
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL-DL 178
++ R L +VA+S+GLVAG L +P+ + +DCS SG + L++ + ++
Sbjct: 147 SCMICVPRRWLNVVATSKGLVAGDLQFVDPDGQTVDCS-LNQSGLVVP---VLVDNVSNI 202
Query: 179 KTD-ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
KT A++++V+EK A FQRL + +P IL+T KG PD+ TR L+ ++ ++P+
Sbjct: 203 KTQHAKFVLVIEKDATFQRLLDQGFTTNMPCILVTGKGVPDVNTRILIRKIWNEL-EIPV 261
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQ--LIPEQSLLPLK 294
L+D +P G+ I+C ++FGS+ + + A +KW+G+ D+ +P+ LPL
Sbjct: 262 FGLMDADPHGIEIMCVYRFGSLSQSHDVHSLALPFMKWIGVFPSDITRLRLPDDVTLPLS 321
Query: 295 PRDLQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQ 351
+D R + + ++ + + EEL M+ ++AE++AL +YL + +I KI
Sbjct: 322 DKDKSKCRDIFARPYIEYHARLAEELHNMLRCDRKAEIQALMRFSPNYLAQVFIPSKIKN 381
Query: 352 ADYI 355
A++I
Sbjct: 382 ANWI 385
>gi|302808592|ref|XP_002985990.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
gi|300146138|gb|EFJ12809.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
Length = 278
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 161/289 (55%), Gaps = 21/289 (7%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
+V++ +L Q K ++R+L+Y P+ Q VN+ + D+ L C+R SL +V
Sbjct: 3 RVLQIVQSLLQQGKHASKRDLYYT----DPD----QATVNQALIDISVRLKCTRSSLHVV 54
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
+ +GL+ G L ++ ++ IDCS C + ++I L L D+ + A YIIVVEK +
Sbjct: 55 SVGKGLIMGSLRFKDADR-TIDCSVC-NPFFNI---LFLDHHKDISSCAEYIIVVEKETV 109
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
FQRL D + I++T +GYPD+ATR L RL A LP+ LVD +P GL IL T
Sbjct: 110 FQRLANDGFCRKNNCIVLTGRGYPDVATRSFL-RLLAAETKLPVYGLVDADPYGLDILAT 168
Query: 254 FKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL 310
++FGS M +A A +++WLG+ D Q +P++ LL L D + A ++++ + L
Sbjct: 169 YRFGSPTMAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLSLTNDDRRKAEAMLNRDYL 228
Query: 311 QE---NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ ++ ++L LM+ G + E+EAL + L YI KI A Y+
Sbjct: 229 KHLAFSWNQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKAAAYL 277
>gi|345292731|gb|AEN82857.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292733|gb|AEN82858.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292735|gb|AEN82859.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292737|gb|AEN82860.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292739|gb|AEN82861.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292741|gb|AEN82862.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292743|gb|AEN82863.1| AT5G02820-like protein, partial [Capsella rubella]
Length = 202
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 130/206 (63%), Gaps = 9/206 (4%)
Query: 132 IVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
++A+ +G+V GRL+ + N ++IDC+ G G +I ++ + D+++DA +I++VEK
Sbjct: 1 VIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQSDAMFILLVEKD 57
Query: 192 AIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
A + RL ED +N+ P I++TAKG PD+ATR L ++ LP+LALVD +P GL IL
Sbjct: 58 AAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKIL 116
Query: 252 CTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSE 308
+ GS M ++ ++KWLG+R D+ IPEQ LP+ +D++ + ++ +
Sbjct: 117 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEED 176
Query: 309 ILQEN--YKEELSLMVHNGQRAEVEA 332
+++N + EEL+LMV Q+AE++A
Sbjct: 177 FVKKNPGWVEELNLMVKTKQKAEIQA 202
>gi|297834134|ref|XP_002884949.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330789|gb|EFH61208.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 151/277 (54%), Gaps = 17/277 (6%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L + + ++R+++Y P F +Q V+R I D+ L CSR++L +V+ GLV
Sbjct: 88 QLLQENRHASKRDIYYM----HPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVGNGLV 143
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G L +E ++ DC ++ Y + + +E D+ + A YI+VVEK +FQRL D
Sbjct: 144 MGWLKFREAGRK-FDCLNSLNTAYPVPVLVEEVE--DIVSLAEYILVVEKETVFQRLAND 200
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
I+IT +GYPD++TR L L LP+ LVD +P G IL T++FGS+
Sbjct: 201 MFCKTNRCIVITGRGYPDVSTRRFLRLLMEKL-HLPVHCLVDCDPYGFEILATYRFGSMQ 259
Query: 261 MG--MEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--- 313
M +E+ R A ++KWLG D ++ +P+Q LLPL D + +L+ L+
Sbjct: 260 MAYDIESLR-APDMKWLGAFPSDSEIYSVPKQCLLPLTEEDKKRTEALLLRCYLKREMPR 318
Query: 314 YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
++ EL M+ G + E+EAL H +L + YI KI
Sbjct: 319 WRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKI 355
>gi|225461890|ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
vinifera]
Length = 361
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 153/280 (54%), Gaps = 15/280 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L + + ++R+++Y P F+ Q V+R I D+ LL CSR +L +V+ +GLV
Sbjct: 88 QLLQENRHGSKRDIYYM----HPSVFSDQSVVDRAINDICILLQCSRHNLNVVSVGKGLV 143
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G L E ++ DC ++ Y + + + E D+ + A+YI+VVEK ++FQRL D
Sbjct: 144 MGWLRFLEAGKK-FDCINGPNTAYPVP--VHVEEVKDIVSVAQYILVVEKESVFQRLAND 200
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
N+ I+IT +GYPDI TR L L L + LVD +P G IL T++FGS+
Sbjct: 201 KFCNKNRCIVITGRGYPDIPTRRFLRLLVEKL-HLHVYCLVDCDPYGFDILTTYRFGSMQ 259
Query: 261 MGMEA-YRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQE---NY 314
M +A + ++WLG D + +PE LLPL D + +++ LQ+ ++
Sbjct: 260 MAYDAKFLRVPEIEWLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRCYLQQELLHW 319
Query: 315 KEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQAD 353
+ EL LM+ G + E+EAL H +L + YI KI A+
Sbjct: 320 RLELELMLQRGVKFEIEALSVHSLSFLSENYIPSKIQVAE 359
>gi|328860088|gb|EGG09195.1| hypothetical protein MELLADRAFT_104525 [Melampsora larici-populina
98AG31]
Length = 434
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 165/312 (52%), Gaps = 35/312 (11%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
+ AK + +++E +S+ VT+RE++Y+ + F +Q QV+R + D+ A L
Sbjct: 131 SGAKELAMLLRIVEITHDAISRNVTVTKREIYYRDV----NLFKTQTQVDRLVDDLAATL 186
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
SR L ASS+GL++G + L+ + ++I S ++ ++ ++ L+ D R
Sbjct: 187 EISRAELHTFASSKGLLSGNIQLKTTDDQIISASKIP----ALIPAAEVISEIILEEDVR 242
Query: 184 YIIVVEKHAIFQRL-----TEDFVFNQIPSILITAKGYPDIATRFLLHRLN--RAFPDLP 236
+++VVEK A+F L +D F + S LIT KGYPD+ATR LLHRL+ +P
Sbjct: 243 FVLVVEKEAVFTSLLSVGFPDDRRFGK--SALITGKGYPDLATRQLLHRLSTEEKSNHIP 300
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLK 294
I LVD +P G+ IL +KFGS M + ++W+GL+ + + + SLLPL
Sbjct: 301 IYILVDCDPHGIDILSVYKFGSHKMSFQTGLSVEKIEWIGLKCSEWKELDLDSHSLLPLT 360
Query: 295 PRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALY----------------FHGY 338
DL A L+S + L +++ ELS M+ G +AE++AL F
Sbjct: 361 KSDLSKAEQLISRKGLPQSWLNELSSMLEMGFKAEIQALLSFKQKVEDPNHRIHQPFQKD 420
Query: 339 DYLGKYIAKKIV 350
D L +Y+ KK++
Sbjct: 421 DGLVEYLLKKLI 432
>gi|363741696|ref|XP_001232076.2| PREDICTED: meiotic recombination protein SPO11 [Gallus gallus]
Length = 382
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 162/294 (55%), Gaps = 19/294 (6%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIAL 122
A F + K++ ++++ T+R+++Y KLL F SQ V+ I ++ +
Sbjct: 93 TAPKFAMMLKILSMIYKMVQSNSYATKRDIYYSDKLL------FGSQRVVDNLINEISCM 146
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
L R SL I++++RG VAG L E + ++C+ CG++ ++ ++ ++ +L + A
Sbjct: 147 LQIPRRSLHILSTTRGFVAGNLSYTEEDGTKVNCT-CGATAVTVPSNVQGIK--NLYSHA 203
Query: 183 RYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
++I++VEK A FQRL +D F P I+IT +G PD+ TR L+ +L +PI L+
Sbjct: 204 KFILIVEKDATFQRLLDDEFCIKLAPCIMITGRGIPDLNTRLLVRKLWDTL-QIPIFTLM 262
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQL--IPEQSLLPLKPRDL 298
D +P G+ I+C +K+GS+ M EA++ +KWLGL D++ I + L+P +D
Sbjct: 263 DADPHGVEIMCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDIKRLNIRKDVLIPFTKQDQ 322
Query: 299 QIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
SL + Q +K+EL +M + +AE++ L DYL + Y+ K+
Sbjct: 323 NKLASLQKRPYIACQPVWKKELEIMAASKMKAEIQVLTSLSSDYLSRVYLPNKL 376
>gi|410899931|ref|XP_003963450.1| PREDICTED: meiotic recombination protein SPO11-like [Takifugu
rubripes]
Length = 364
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 32/368 (8%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNS---RVSQGL-LTDVSWIFLSHSFC 56
V RIE ++ + L+ + + LP NR S + S GL +T S + C
Sbjct: 16 VLERIESVILGIVTSLSKDEAPVLLLP--NRSSWTNVSFDSSVGLQMTSESSVTSVRCDC 73
Query: 57 TRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
S+TK F ++ K++ ++++ + T+R++FY ++ F SQ V+ +
Sbjct: 74 ASSVTK------FAQLLKILSVIYKLVQSDSFATKRDIFY----NNTRLFGSQTSVDTIV 123
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDC--SACGSSGYSISGDLSLLE 174
D+ LL SR +L ++A+S+G ++G L E + I C S + +ISG +++
Sbjct: 124 DDISCLLKVSRRALHVLATSKGFISGDLCYMESDGTRISCSSSQAVAVSSNISGIRNIV- 182
Query: 175 KLDLKTDARYIIVVEKHAIFQR-LTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ AR++++VEK A FQR L +DF P I+IT KG PD+ +R ++ +L
Sbjct: 183 -----SSARFVLIVEKDATFQRLLDDDFCAKLSPCIMITGKGVPDLNSRLMVRKLWDTL- 236
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSL 290
+PI ALVD +P G+ I+ +K+GS+ M EA+ +V WLGL D+Q +P+ L
Sbjct: 237 HIPIFALVDADPHGIEIMSIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPQDVL 296
Query: 291 LPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAK 347
LPL RD SL+ L Q +K E+ LM +AE+++L D+L Y+
Sbjct: 297 LPLTKRDECKLASLLKRPYLSSQPQWKREMELMQQTQVKAEIQSLSAIAPDFLTNIYLPN 356
Query: 348 KIVQADYI 355
K+ +I
Sbjct: 357 KLRYKGWI 364
>gi|15231162|ref|NP_187923.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
gi|75335900|sp|Q9M4A2.1|SPO11_ARATH RecName: Full=Meiotic recombination protein SPO11-1;
Short=AtSPO11-1
gi|7270975|emb|CAB81544.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|114050705|gb|ABI49502.1| At3g13170 [Arabidopsis thaliana]
gi|332641783|gb|AEE75304.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 152/279 (54%), Gaps = 21/279 (7%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L + + ++R+++Y P F +Q V+R I D+ L CSR++L +V+ GLV
Sbjct: 88 QLLQENRHASKRDIYYM----HPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVGNGLV 143
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G L +E ++ DC ++ Y + + +E D+ + A YI+VVEK +FQRL D
Sbjct: 144 MGWLKFREAGRK-FDCLNSLNTAYPVPVLVEEVE--DIVSLAEYILVVEKETVFQRLAND 200
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
I+IT +GYPD++TR L L LP+ LVD +P G IL T++FGS+
Sbjct: 201 MFCKTNRCIVITGRGYPDVSTRRFLRLLMEKL-HLPVHCLVDCDPYGFEILATYRFGSMQ 259
Query: 261 MG--MEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQ-----IARSLMSSEILQ 311
M +E+ R A ++KWLG D ++ +P+Q LLPL D + + R + E+ Q
Sbjct: 260 MAYDIESLR-APDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQ 318
Query: 312 ENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
++ EL M+ G + E+EAL H +L + YI KI
Sbjct: 319 --WRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKI 355
>gi|298713147|emb|CBJ26903.1| Sporulation-specific protein 11 homologue [Ectocarpus siliculosus]
Length = 330
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 27/263 (10%)
Query: 76 METCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVAS 135
M ++L K TQRE++Y + ++F +Q + N I D +LL R LGIVAS
Sbjct: 1 MSFSMRLLETRKTATQREIYYTFV----KHFANQTKCNDAILDCCSLLGEPRHCLGIVAS 56
Query: 136 SRGLVAGRLMLQ-EPNQEVIDC-SACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
SRG +AGR+ ++ E ++ D S GSSG +I+ D L L+LK+DAR ++VVEK +
Sbjct: 57 SRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDW-LTRPLELKSDARIVLVVEKDGV 115
Query: 194 FQRLTEDFVFN-----------QIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
F R+ ED ++ +IPS+L+T +G+P +A R ++RL A DLP+L LVD
Sbjct: 116 FNRMVEDGFYDRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEAL-DLPVLGLVD 174
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRG---DDVQLIPEQSLLPLKPRDL 298
NP GL++ +K GS G + ++ +KW+GLR DD+ L P++ L +DL
Sbjct: 175 CNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDL-PDEVHQTLSQQDL 233
Query: 299 QIARSLMSSEILQEN---YKEEL 318
A+S+ +S ++ +N Y EE+
Sbjct: 234 SRAQSVANSTLVTDNPDTYGEEV 256
>gi|13383478|gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 152/279 (54%), Gaps = 21/279 (7%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L + + ++R+++Y P F +Q V+R I D+ L CSR++L +V+ GLV
Sbjct: 88 QLLQENRHASKRDIYYM----HPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVGNGLV 143
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G L +E ++ DC ++ Y + + +E D+ + A YI+VVEK +FQRL D
Sbjct: 144 MGWLKFREAGRK-FDCLNSLNTAYPVPVLVEEVE--DIVSLAEYILVVEKETVFQRLAND 200
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
I+IT +GYPD++TR L L LP+ LVD +P G IL T++FGS+
Sbjct: 201 MFCKTNRCIVITGRGYPDVSTRRFLRLLMEKL-HLPVHCLVDCDPYGFEILATYRFGSMQ 259
Query: 261 MG--MEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQ-----IARSLMSSEILQ 311
M +E+ R A ++KWLG D ++ +P+Q LLPL D + + R + E+ Q
Sbjct: 260 MAYDIESLR-APDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQ 318
Query: 312 ENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
++ EL M+ G + E+EAL H +L + YI KI
Sbjct: 319 --WRLELETMLKRGVKFEIEALSVHSLSFLSEIYIPSKI 355
>gi|449274257|gb|EMC83540.1| Meiotic recombination protein SPO11, partial [Columba livia]
Length = 353
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 165/299 (55%), Gaps = 15/299 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
++A F + K++ ++++ T+R+++Y F SQ V+ I D+ +L
Sbjct: 63 SSAPRFALMLKILSMIYKMVQSNTYATKRDIYYS----DTLLFGSQSIVDNIINDISCML 118
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
R SL I+++++G VAG L E + ++C+ C ++ +++ ++ ++ +L + A+
Sbjct: 119 QIPRRSLHILSTTKGFVAGNLSYTEEDGTKVNCT-CSATVFTVPSNVQGIK--NLISHAK 175
Query: 184 YIIVVEKHAIFQRL-TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
+I++VEK A FQRL +DF P I+IT +G PD+ TR L+ +L AF +P+ L+D
Sbjct: 176 FILIVEKDATFQRLLDDDFCTKLSPCIMITGRGVPDLNTRLLVRKLWDAF-QIPVFTLMD 234
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQ 299
+P G+ I+C +K+GS+ M EA+ ++KWLGL D++ I + +L+P +D
Sbjct: 235 ADPHGVEIMCIYKYGSVSMSFEAHHLTVPSIKWLGLLPSDLERLNIHKDALIPFTKQDQN 294
Query: 300 IARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
S+ L Q +K EL +M + +AE++ L DYL + Y+ K+ +I
Sbjct: 295 KLASIQKRPYLACQPLWKRELDIMAASKLKAEIQVLTSLSSDYLSRVYLPNKLKFGGWI 353
>gi|327278047|ref|XP_003223774.1| PREDICTED: meiotic recombination protein SPO11-like [Anolis
carolinensis]
Length = 391
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 161/298 (54%), Gaps = 16/298 (5%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
+A F K+ ++++ T+R++FY F +Q V+ I D+ +L
Sbjct: 103 SATNFALFLKIFSIVYKMVQTNIYATKRDIFYT----DTVLFGNQKVVDDIITDISCMLK 158
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
R +L I+++S+GL+AG L E + ++C+ S+ ++ ++ + +L TDA++
Sbjct: 159 IPRRNLHILSTSKGLIAGNLSYIEEDGTKVNCTC--STTAAVPSNVEGMR--NLITDAKF 214
Query: 185 IIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
I++VEK A FQRL +D N++ P I++T KG PD+ TR LL +L +PI AL+D
Sbjct: 215 ILIVEKDATFQRLLDDNFCNKMDPCIIVTGKGVPDVNTRLLLKKLWDTC-HVPIFALMDA 273
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQI 300
+P G+ I+C +K+GS+ M EA V+WLG+ D + IP+ +L+PL +D
Sbjct: 274 DPHGIEIMCIYKYGSMSMSFEAPNLTVPAVRWLGILPSDFERLNIPKTALIPLSKKDQSK 333
Query: 301 ARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
SL + Q +K EL +M +AE++AL DYL + Y+ K+ +I
Sbjct: 334 LASLQMRPFIAYQSTWKNELDIMETCQMKAEIQALNSFSSDYLSRVYLPNKLQFGGWI 391
>gi|221483092|gb|EEE21416.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
GT1]
Length = 342
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 15/297 (5%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
++ K V +++ +L + TQRELFY L+ F +Q QVN +Q +++
Sbjct: 58 RTFGIKKLTWVLSLLDQIHGLLMTNRAATQRELFYGLV----NVFDTQAQVNAQLQQIVS 113
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
L R SL + AS +GLVAG L + + +DC G+ G IS L +++L+ +
Sbjct: 114 WLEIPRDSLNVFASQKGLVAGMLTFVKGSL-TLDCRRTGT-GVLISETLVEVDRLE--SH 169
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
A YIIVVEK AIFQ L E ++N IP ILIT KG+PD TR LL RL + L I
Sbjct: 170 ASYIIVVEKDAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRRLQMS---LNIKVGR 226
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
++P G++I +++ GS R A + W+GL +D++ +P LPL RD +
Sbjct: 227 YFDPHGISIFLSYQHGSRAFEGPLVRCAV-LHWIGLCFEDLEQLPVDVRLPLLSRDRALL 285
Query: 302 RSLMSSEILQ--ENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+SL+ ++ E + + S M+ + + E+EA+ G++YL + YI KI++ +I
Sbjct: 286 KSLLVHPKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARYYIPSKILKRTWI 342
>gi|237840215|ref|XP_002369405.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
gi|211967069|gb|EEB02265.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
Length = 342
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 15/297 (5%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
++ K V +++ +L + TQRELFY L+ F +Q QVN +Q +++
Sbjct: 58 RTFGIKKLTWVLSLLDQIHGLLMTNRAATQRELFYGLV----NVFDTQAQVNAQLQQIVS 113
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
L R SL + AS +GLVAG L + + +DC G+ G IS L +++L+ +
Sbjct: 114 WLEIPRDSLNVFASQKGLVAGMLTFVKGSL-TLDCRRTGT-GVLISETLVEVDRLE--SH 169
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
A YIIVVEK AIFQ L E ++N IP ILIT KG+PD TR LL RL + L I
Sbjct: 170 ASYIIVVEKDAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRRLQMS---LNIEVGR 226
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
++P G++I +++ GS R A + W+GL +D++ +P LPL RD +
Sbjct: 227 YFDPHGISIFLSYQHGSRAFEGPLVRCAV-LHWIGLCFEDLEQLPVDVRLPLLSRDRALL 285
Query: 302 RSLMSSEILQ--ENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+SL+ ++ E + + S M+ + + E+EA+ G++YL + YI KI++ +I
Sbjct: 286 KSLLVHRKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARYYIPSKILKRTWI 342
>gi|412986592|emb|CCO15018.1| DNA topoisomerase VI subunit A [Bathycoccus prasinos]
Length = 457
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 151/297 (50%), Gaps = 14/297 (4%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
F RV ++ + Q K VTQRE++Y P F+ + V I+D+ LL R
Sbjct: 153 TFARVIAMLNLIHTNVRQGKTVTQREMYYCASAKEPLLFSKVVHVLNAIKDIAGLLRIDR 212
Query: 128 FSLGIVASSRGLVAGRLMLQ-EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD-ARYI 185
+L I ++S+GLV G + L+ + Q +DCS SG++I GDL +E L + +I
Sbjct: 213 GALNITSASKGLVVGLVSLRNDVTQTFVDCSNLDGSGFTIPGDLKTIESLSIDASMCAFI 272
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD--LPILALVDW 243
+VVEK A+F +L ++ ++ + P ++TAKG+PD+ TR L+RL I LVDW
Sbjct: 273 LVVEKDAVFNKLVQERIWERYPCAVVTAKGFPDLPTRAFLNRLASTGVQRTCKIYVLVDW 332
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLP--LKPRDLQI 300
NP+GL I T+ G E+ +YA N +LG+ +D+ L + L K I
Sbjct: 333 NPSGLWIYSTYVTGGASNVNESTKYALRNAVFLGVSHEDI-LAAGKVLTSKHTKKESRDI 391
Query: 301 ARSLMSSE-ILQENYKEELSLMVHNGQRAEVEALYFHGYD-----YLGKYIAKKIVQ 351
A +L L +K EL M G++ E+E LY + L +Y+ KI Q
Sbjct: 392 ANALRRKRGPLYSTFKSELEQMHALGRKCEIEGLYASNINDDNCSVLSEYVLTKIAQ 448
>gi|428170369|gb|EKX39295.1| topoisomerase 6 subunit A [Guillardia theta CCMP2712]
Length = 436
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 178/355 (50%), Gaps = 45/355 (12%)
Query: 40 QGLLTDVSWI------FLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
+G T+V ++ +L + R S+ K + ++M+ ++ + T+R+
Sbjct: 88 RGSATNVQFVPELDRNYLEYKAMKRQFADSSQVKRTTMMTRLMQLVHELAKKNIHSTKRD 147
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY + F Q + ++++ + C+R SL + AS +GLV GRL + + +
Sbjct: 148 LFYA----DVKLFEKQQNSDAVLEELSLMFGCTRHSLQVTASEKGLVVGRLQFND-DDDF 202
Query: 154 IDCSACGSSGYSI------SGDLSLLEKL-DLKTD----ARYIIVVEKHAIFQRLTEDFV 202
IDC+ G SG +I S + + L+++ ++K+D A +I++VEK A FQRL ED
Sbjct: 203 IDCTKMGRSGKNIPSFLDRSVNHARLDRVSNIKSDYDRPAEFILLVEKDAAFQRLAEDRF 262
Query: 203 FNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG 262
+N P ++IT KG D+ATR L R+ A +PIL L D + GL IL + GS M
Sbjct: 263 YNTYPCVIITGKGEADLATRMFLRRVKDALK-IPILGLFDSDAHGLKILSVYMQGSEAMS 321
Query: 263 MEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEE 317
++ A ++KWLG+R D+ +P + L L D+ A SL +Q+ + +E
Sbjct: 322 HDSANLATPDIKWLGVRPSDLDKYNVPRECRLELTTHDVSFAESLKEKPYIQKRSAWVKE 381
Query: 318 LSLMVHNGQRAEV----------------EALYFHGYDYLGK-YIAKKIVQADYI 355
L ++ ++AE+ EA G+ YL + Y+ +K+ + D++
Sbjct: 382 LETLLSRKEKAEIRMIFLLCFGGIYLVCAEAFTSKGFQYLTQEYLPRKLREGDWV 436
>gi|350404734|ref|XP_003487202.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
impatiens]
Length = 401
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 155/290 (53%), Gaps = 11/290 (3%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP-EYFTSQLQVNRTIQDVIALLHCSR 127
F VM ++L +T+R L+Y L D Q +++ + V LL+CS
Sbjct: 120 FALTMTVMAAAHRLLIINSTITRRSLYYDLKNDKTLNLVPEQWYLDQAVNHVANLLNCSP 179
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIV 187
+ L ++ +S+GLVAG L N +IDC+ G G I ++S E + ++T A+ +++
Sbjct: 180 WELNLLPTSKGLVAGELTFTLTNNRIIDCTVPG--GVLIPHNIS--EVISVRTRAKMVLI 235
Query: 188 VEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
VEK A+FQ+L +D + + IL+T KGYPD+ TR L+ L+ +LP+ +VD +P G
Sbjct: 236 VEKDAVFQKLLKDDCTSSLSCILVTGKGYPDVTTRMLVKLLSEKL-ELPVYIIVDADPFG 294
Query: 248 LAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMS 306
+ I+C ++FGS + E AC+ V+WLG+ ++ L + +PL D +L
Sbjct: 295 VDIMCVYRFGSAALSRERKCLACSKVRWLGIHPSEL-LALGVNTVPLTEFDFSRLMALEG 353
Query: 307 SEILQENYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQADYI 355
+ + +++EL +M +AE+E +Y +L Y+ KI DYI
Sbjct: 354 RPYMTDAFRKELEIM--RTGKAEIENVYSSSGRFLAATYLPCKIKGNDYI 401
>gi|356499439|ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
Length = 367
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 19/300 (6%)
Query: 59 SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQD 118
+L + + A + +VM ++L + K ++R+++Y P F Q V++ I D
Sbjct: 72 TLRRKSHAHRLAVMLRVMLIVQKLLQENKHSSKRDIYYTY----PSVFLDQSVVDQAIND 127
Query: 119 VIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
+ L+ CSR +L +V++ GL+ G + E + + DC + ++ + + + + E D+
Sbjct: 128 ICILMQCSRHNLNVVSAGNGLIMGWIRFSE-GERIFDCISSPNTAHPVP--VHVEEVQDI 184
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+ A+YI+VVEK ++FQRL D N I+IT +GYPDI TR L L LP
Sbjct: 185 ISLAQYILVVEKESVFQRLANDQFCNANHCIVITGRGYPDIPTRRFLRLLVENLC-LPAY 243
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQ--LIPEQSLLPLKP 295
LVD +P G IL T++FGS+ M + + ++WLG D + +P Q LLPL
Sbjct: 244 CLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTA 303
Query: 296 RDLQ-----IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
D + + R + E+ Q ++ EL L++ G + E+EAL H +L + YI KI
Sbjct: 304 EDKRKVEAMLLRCYLEREVPQ--WRLELQLILQRGVKFEIEALSVHALSFLSESYIPSKI 361
>gi|301122147|ref|XP_002908800.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099562|gb|EEY57614.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 349
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 182/367 (49%), Gaps = 56/367 (15%)
Query: 4 RIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKS 63
RIE FL+ L++ + +L + R SS ++ D +H TR L K
Sbjct: 24 RIEALAAEFLETLSTGK--VLELEALKRHSS------AMIYDHENQRQTHGNETR-LVKL 74
Query: 64 N--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
N + + +W +++T +L++ K TQR+++Y +F Q + + I D +
Sbjct: 75 NRQGGRRYTGIWLILQTAHALLAENKTATQRDVYYL-----HPFFKGQNEADEAILDAGS 129
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
+L R S+ IVA+++G C +GD+S+L ++ +
Sbjct: 130 ILGIPRGSMNIVAATKG--------------------C------FTGDISILVRIHRNGN 163
Query: 182 ARYIIVVEKHAIFQRL-------TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD 234
R E+ +I L ED F +PSILIT +G+PD+ATR ++ L+ A
Sbjct: 164 WRQFGSGEEVSITHELLQIKPHDIEDKFFETVPSILITGRGFPDLATRAFVNLLSNAL-G 222
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL--IPEQSLLP 292
+P+L L D NP GL+I+ T+K GS M +++ RYA ++KW+G+R V +P S
Sbjct: 223 IPVLGLCDCNPFGLSIMLTYKLGSARMPLDSLRYAVDIKWVGVRPSQVSHLGLPTSSFKA 282
Query: 293 LKPRDLQIARSLMSSEILQEN--YKEELSLMVHNG--QRAEVEALYFHGYDYLGKYIAKK 348
L +DL +A SLM + +Q N +K+E+ + + + + E+EALY G+ +L ++
Sbjct: 283 LTRKDLAVADSLMRASFIQANAFFKDEVQMWLGDALPWKIELEALYSSGFTFLTSFLQDC 342
Query: 349 IVQADYI 355
I +Y+
Sbjct: 343 IENGNYL 349
>gi|340721663|ref|XP_003399236.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
terrestris]
Length = 398
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 155/290 (53%), Gaps = 11/290 (3%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP-EYFTSQLQVNRTIQDVIALLHCSR 127
F + VM ++L +T+R L+Y L D Q +++ + V LL+CS
Sbjct: 117 FALMMTVMAAAHRLLIINSTITRRSLYYDLKNDKTLNLVPEQWYLDQAVNHVANLLNCSP 176
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIV 187
+ L ++ +S+GLVAG L + +IDC+ G G I +S E + ++T A+ +++
Sbjct: 177 WELNLLPTSKGLVAGELTFTLTDNRIIDCTVPG--GVLIPHSVS--EVISVRTRAKMVLI 232
Query: 188 VEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
VEK A+FQ+L ED + + IL+T KGYPD+ TR L+ L+ +LP+ +VD +P G
Sbjct: 233 VEKDAVFQKLLEDDCISSLSCILVTGKGYPDVTTRMLVKLLSEKL-ELPVYIIVDADPFG 291
Query: 248 LAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMS 306
+ I+C ++FGS + E AC+ V+WLG+ ++ L + +PL D +L
Sbjct: 292 VDIMCVYRFGSAALSRERKCLACSKVRWLGIHPSEL-LALGVNTVPLTEFDFSRLMALEG 350
Query: 307 SEILQENYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQADYI 355
+ + +++EL +M +AE+E +Y +L Y+ KI DYI
Sbjct: 351 RPYMTDAFRKELEIM--RTGKAEIENVYSSSGRFLAATYLPCKIKGNDYI 398
>gi|45387775|ref|NP_991245.1| meiotic recombination protein SPO11 [Danio rerio]
gi|41107578|gb|AAH65463.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Danio rerio]
gi|182892100|gb|AAI65825.1| Spo11 protein [Danio rerio]
Length = 383
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 181/342 (52%), Gaps = 27/342 (7%)
Query: 26 LPLINRKSSNS---RVSQGLL--TDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF 80
L LINR N+ + S GL+ DVS +L K A F + K++ +
Sbjct: 57 LRLINRSCWNNVRFQESVGLVLKDDVSPKYLH-------CGKPTTATKFALILKILSIIY 109
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
+++ + T+R+++Y + P+ F SQ ++ + D+ +L R SL I+A+S+G +
Sbjct: 110 KLVQSDSYATKRDIYY----NDPQLFGSQRMLDSIVDDISCMLKVPRRSLHILATSKGFI 165
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TE 199
+G L E + +DC++ ++ S + ++ + A++I++VEK A FQRL +
Sbjct: 166 SGDLCYLEEDGTKVDCNSSSTAVSVSSNVNGIR---NIVSSAKFILIVEKDATFQRLLDD 222
Query: 200 DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI 259
DF P I+IT KG PD+ +R ++ +L A +P+ ALVD +P G+ I+C +K+GS+
Sbjct: 223 DFCARLSPCIIITGKGVPDVNSRLMVRKLWDAL-HVPVFALVDADPHGIEIMCIYKYGSV 281
Query: 260 GMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEIL--QENY 314
M EA+ +V WLGL D+Q +PE++L+P D + SL S + Q +
Sbjct: 282 SMAFEAHSLTVPSVLWLGLLPSDIQRYRVPEEALIPFAKADERKISSLRSRSYITCQPTW 341
Query: 315 KEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ E+ M + ++AE++ L +L + Y+ K+ +I
Sbjct: 342 EREVETMQNLKRKAEIQCLASIAPHFLTRVYLPNKLRYGGWI 383
>gi|409044860|gb|EKM54341.1| hypothetical protein PHACADRAFT_96783, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 390
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 183/341 (53%), Gaps = 25/341 (7%)
Query: 9 VINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL-----TKS 63
V++FL+ ++ P + D +R S S+V+ L + S TR L K
Sbjct: 2 VLDFLRQVSKAMPTLDDSG--SRLQSQSKVALKLADRRKPMKEDGSPATRLLLFPHNAKH 59
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQR--ELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
++++A +V + +E + L T+R +++YK D P F SQ+ V++ + D+ A
Sbjct: 60 SSSRAIAQVLRTVELMHEALVTGVPTTKRLVDMYYK---DVP-LFGSQVVVDKLVDDIAA 115
Query: 122 LLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
L R L + ASS+GLV+GR L + ++ I S S+ +S + +E+ +++
Sbjct: 116 TLSVGRADLNVRASSKGLVSGRGLTMHLYEEDSITVSTSESTLIPVSEE---IERFEVED 172
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQI----PSILITAKGYPDIATRFLLHRLNRAFP-DL 235
D +++VVEK A+FQ L + P +LIT KGYPD+ATR L+ L+ P +
Sbjct: 173 DLSWVLVVEKEAVFQTLCRLNLAEHSRLPGPGLLITGKGYPDVATRQLVRTLSDNLPAAV 232
Query: 236 PILALVDWNPAGLAILCTFKFGSIGMGMEAYR-YACNVKWLGLRGDDVQLIP--EQSLLP 292
PI++LVD +P G+ IL +K+GS M E A + W G+RG+D+ L+ + ++LP
Sbjct: 233 PIISLVDCDPWGIDILSVYKYGSASMVHEHKSLVASRIVWGGVRGEDISLLGLNKDAMLP 292
Query: 293 LKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
+ D + A +++ L +K EL M+H+ ++AE+E L
Sbjct: 293 ITKHDQKKAMAILRRTDLPGEWKTELQHMLHSRRKAEIEVL 333
>gi|224006946|ref|XP_002292433.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
gi|220972075|gb|EED90408.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
Length = 272
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 154/286 (53%), Gaps = 24/286 (8%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
+ F + KVM Q+L + T RE++Y + +F +Q + + TI DV +L+
Sbjct: 4 RTFTSITKVMAFIHQLLLSNRTTTTREVYYVFVT----HFRNQKECDGTILDVAKILNVP 59
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R +LG+ AS +G + GR + E +C +G++ G +E DA+ I+
Sbjct: 60 RRALGLSASPKGELEGRSVYME--------ISCLVNGFADDG----VEIKVTSKDAKVIV 107
Query: 187 VVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
V+EK ++ +L+E+ +F+ P IL+T KG+PD+ATR L++ L++ D+P++ + D NP
Sbjct: 108 VIEKEGVYNKLSEERIFDDFPCILVTGKGFPDLATRALVNTLHKEL-DIPVVGICDSNPF 166
Query: 247 GLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQL----IPEQSLLPLKPRDLQIA 301
G+++L + MG++ +Y + W+GLR V+ +P+ L D +
Sbjct: 167 GISVLALYYCAGERMGVDGRMKYTVPMMWIGLRPSTVESLEDDLPKDVFQSLTDLDYKRI 226
Query: 302 RSLMSSE--ILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYI 345
SL+ + L E EE+ M +G++ E+EALY+ G DY+ ++
Sbjct: 227 DSLLDEDNLFLNEERYEEIVKMKESGKKVELEALYWLGSDYMSNWV 272
>gi|242018089|ref|XP_002429514.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
gi|212514456|gb|EEB16776.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
Length = 380
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 172/300 (57%), Gaps = 19/300 (6%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
K N F + ++ ++L+ + T+REL+YK L + F SQ V+ I+D+
Sbjct: 92 KGNCRSKFATIMYLLSKIHKLLTTGQVSTRRELYYKNL----KNFKSQRDVDIAIKDISY 147
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
+L+ + LG++A+S+G+V+G L+L N +V++C+ G S+ ++S +E +L +
Sbjct: 148 ILNAPPWELGVLATSKGMVSGPLLLHLKNGQVLNCNI--KEGVSVPINVSDVE--NLTST 203
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPS-ILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
A++++++EK A FQ L + ++ S ILIT KG+PD+ TR L+ ++ + +PILAL
Sbjct: 204 AKWMLIIEKDASFQTLLDSSAVEKLDSCILITGKGFPDVNTRMLVCKVWQKL-QIPILAL 262
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRD 297
D +P G I+C ++FGS+ M A AC +++WLG+ +D++ L+ Q+ L D
Sbjct: 263 CDADPYGFEIMCVYRFGSVSMSNLADSLACPSIRWLGIHPNDIKPLLLNSQT---LSAND 319
Query: 298 LQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQADY 354
++ ++ M+ +Q+N+ +L + ++AE+E + ++L Y+ KI +Y
Sbjct: 320 IKKIKNAMNRSYVQKNFNLINQLQTFLKENRKAEIEEISNISPNFLIDVYLKNKIQCKEY 379
>gi|295830615|gb|ADG38976.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830617|gb|ADG38977.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830621|gb|ADG38979.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830623|gb|ADG38980.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830625|gb|ADG38981.1| AT5G02820-like protein [Neslia paniculata]
Length = 199
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 130 LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVE 189
L ++A+ +G+V GRL+ + N ++IDC+ G G +I ++ + D+++DA +I++VE
Sbjct: 1 LNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQSDAMFILLVE 57
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
K A + RL ED +N+ P I++TAKG PD+ATR L ++ LP+LALVD +P GL
Sbjct: 58 KDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLK 116
Query: 250 ILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMS 306
IL + GS M ++ ++KWLG+R D+ IPEQ LP+ +D++ + ++
Sbjct: 117 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLE 176
Query: 307 SEILQEN--YKEELSLMVHNGQR 327
+ +++N + EEL+LMV Q+
Sbjct: 177 EDFVKKNPGWVEELNLMVKTKQK 199
>gi|383864596|ref|XP_003707764.1| PREDICTED: meiotic recombination protein SPO11-like [Megachile
rotundata]
Length = 388
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 13/297 (4%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT-SQLQVNRTIQDVIA 121
S F + VM T ++L T+R L+Y L + Q V+R + V
Sbjct: 101 SRGKDKFALMMTVMATAHRLLITNTTATRRSLYYDLKNEETSNLVLGQGYVDRAVNCVAN 160
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS-ISGDLSLLEKLDLKT 180
LL+C+ + L I+A+S+GL AG L L + IDCS G + I+ +++ ++T
Sbjct: 161 LLNCAPWELNILATSKGLAAGDLTLTLIDNRSIDCSVPGGALIPCINSNVT-----SVRT 215
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
A+ +++VEK A+FQ+L ED + + IL+T KGYPD+ATR L+ L LP+ +
Sbjct: 216 TAKMVLIVEKDAVFQKLLEDDCMSSLNCILVTGKGYPDVATRMLVKLLAEKL-GLPVYVV 274
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
VD +P G+ I+C ++FGS + E C NV+WLG+ ++Q + + +PL DL
Sbjct: 275 VDADPFGVDIMCVYRFGSSTLSKENESLVCPNVRWLGIHPSELQPLGVNT-IPLTEFDLS 333
Query: 300 IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
++ S + + +EL +M +AE+E + +L Y+ KI DYI
Sbjct: 334 KLTAIESRPYMTPRFFKELEIMRKG--KAEIENVSSFSRKFLTSMYLPCKIKGQDYI 388
>gi|320170822|gb|EFW47721.1| meiotic recombination protein SPO11 [Capsaspora owczarzaki ATCC
30864]
Length = 673
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 179/342 (52%), Gaps = 28/342 (8%)
Query: 35 NSRV-SQGLLTD--VSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQ 91
+SRV QG++ D V + L H+ T+ + N+ + F +WKV+E F++L ++ T+
Sbjct: 338 HSRVRQQGIVFDPQVGFRVLLHNKLTK-VDMFNSPRRFAVMWKVLECIFELLRRKLNTTK 396
Query: 92 RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQ-EPN 150
R+LFY D P F SQ V+ I D+ LL SR L +AS +GL+ G L + EP
Sbjct: 397 RDLFY---LDVP-LFGSQKSVDCAIDDIACLLQVSRAQLHCIASFKGLICGNLEVSFEPL 452
Query: 151 QEVIDCSACGSSGYSISGDLS---LLEKLD----LKTDARYIIVVEKHAIFQRLTEDFVF 203
E+ D G +S L L +D ++T A ++++VEK A+F RL D VF
Sbjct: 453 DELED-QEDGEQRAFLSTQLESKLLPRDIDDITVMQTTAEFVLIVEKEAVFHRLLNDRVF 511
Query: 204 NQIPS-ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG 262
+ I I+IT GYPDI TR +HRL LP+ ALVD +P G ILC +K+GS +
Sbjct: 512 DHIGDCIVITGIGYPDIQTRSFVHRLAEMC-GLPMYALVDCDPHGFDILCNYKYGSRALA 570
Query: 263 MEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQ----ENYK 315
++ +++WLGL D+ I E + L D SL+++ L ++
Sbjct: 571 FDSENLTVPSLRWLGLLPSDIDKFNIQEANWLAFNQYDTGKLTSLLNAPFLTLPDLHLWR 630
Query: 316 EELSLMVHNGQRAEVEALYFHG-YDYL-GKYIAKKIVQADYI 355
EEL LM G + E++AL G +L G+++ K+ ++
Sbjct: 631 EELELMQARGIKCELQALNVDGDLTFLTGRFLPHKLQSGHFL 672
>gi|221504024|gb|EEE29701.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
VEG]
Length = 342
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 161/297 (54%), Gaps = 15/297 (5%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
++ K V +++ +L + TQRELFY L+ F +Q QVN +Q +++
Sbjct: 58 RTFGIKKLTWVLSLLDQIHGLLMTNRAATQRELFYGLV----NVFDTQAQVNAQLQQIVS 113
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
L R SL + AS +GLVAG L + + +DC G+ G IS L +++L+ +
Sbjct: 114 WLEIPRDSLNVFASQKGLVAGMLTFVKGSL-TLDCRRTGT-GVLISETLVEVDRLE--SH 169
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
A YIIVVEK AIFQ L E ++N IP ILIT KG+PD TR LL L + L I
Sbjct: 170 ASYIIVVEKDAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRCLQMS---LNIEVGR 226
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
++P G++I +++ GS R A + W+GL +D++ +P LPL RD +
Sbjct: 227 YFDPHGISIFLSYQHGSRAFEGPLVRCAV-LHWIGLCFEDLEQLPVDVRLPLLSRDRALL 285
Query: 302 RSLMSSEILQ--ENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+SL+ ++ E + + S M+ + + E+EA+ G++YL + YI KI++ +I
Sbjct: 286 KSLLVHPKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARYYIPSKILKRTWI 342
>gi|397583607|gb|EJK52708.1| hypothetical protein THAOC_27988 [Thalassiosira oceanica]
Length = 679
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 163/320 (50%), Gaps = 39/320 (12%)
Query: 57 TRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
+RS +++F + VM Q+L + T RE++Y + +F SQ + + I
Sbjct: 352 SRSFGNIAQSRSFTSICLVMSFVHQLLLSNRTTTTREVYYVFVT----HFRSQRECDGAI 407
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQE----PNQEVIDCSACGSSGYSISG---D 169
DV +L SR SLG+ AS +G G L + P + + G++ S+ G
Sbjct: 408 LDVAKMLGVSRVSLGLSASPKGWFCGSLEITRRGTLPCGKDVSGKIDGTALPSVQGLPIT 467
Query: 170 LSLLEKLD------------LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
E+ D DAR I+V+EK ++ RL+E+ +F++ P IL+T KG+P
Sbjct: 468 KEWTERDDEGRTEDGVEILLSSKDARLIVVIEKEGVYNRLSEERIFDRFPCILVTGKGFP 527
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLG 276
D+ATR L+H L+ +LP++ + D NP G+++L + + MG++ RY+ ++W+G
Sbjct: 528 DLATRALVHALHHEL-ELPVVGICDCNPFGVSVLALYCYAGERMGIDGRMRYSVPIEWIG 586
Query: 277 LRGDDVQLIPEQSLLP------LKPRDLQIARSLMSSE------ILQENYKEELSLMVHN 324
LR DV + +S LP L D + SL+ +E L E EE+ LM
Sbjct: 587 LRPSDVDGL--KSELPGTVFQRLTDLDRKRITSLLGTENNSNNPFLTEEDGEEIQLMKER 644
Query: 325 GQRAEVEALYFHGYDYLGKY 344
G + E+EALY+ G D++ K+
Sbjct: 645 GYKLELEALYWLGCDFMAKW 664
>gi|295830619|gb|ADG38978.1| AT5G02820-like protein [Capsella grandiflora]
Length = 199
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 130 LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVE 189
L ++A+ +G+V GRL+ + N ++IDC+ G G +I ++ + D+++DA I++VE
Sbjct: 1 LNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQSDAMVILLVE 57
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
K A + RL ED +N+ P I++TAKG PD+ATR L ++ LP+LALVD +P GL
Sbjct: 58 KDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLK 116
Query: 250 ILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMS 306
IL + GS M ++ ++KWLG+R D+ IPEQ LP+ +D++ + ++
Sbjct: 117 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLE 176
Query: 307 SEILQEN--YKEELSLMVHNGQR 327
+ +++N + EEL+LMV Q+
Sbjct: 177 EDFVKKNPGWVEELNLMVKTKQK 199
>gi|347832663|emb|CCD48360.1| hypothetical protein [Botryotinia fuckeliana]
Length = 496
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 157/277 (56%), Gaps = 18/277 (6%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A FV + +++E + L +T+R+++Y+ PE FT Q V+R + D+ L
Sbjct: 209 AWKFVALLRILELSHEALVTGNIITKRDMYYR----DPELFTKQAIVDRFVDDIACTLGL 264
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
R +L ++A+++GLV G +++ NQ +D S+ S + + +E ++L + ++I
Sbjct: 265 KRDALNVMATAKGLVTGWFVMKRRNQSAMDYSSAADS--QLVPWVREIEDMNL-SHVKWI 321
Query: 186 IVVEKHAIFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
+V+EK A F+ L E + + IL+TAKGYPDI +R LH L + +P +PI ALVD
Sbjct: 322 LVIEKEATFRTLAEKRYWEYSTAGRGILLTAKGYPDIQSRQFLHYLAKHYPMVPIYALVD 381
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQLIPEQS--LLPLKPRDLQ 299
++P G+ I+ T+K GS+ + E + + WLGLR D+ +++ LL L RD +
Sbjct: 382 FDPDGIGIMSTYKHGSVALAHENEGLSVPFMHWLGLRSKDMMQGGKENEGLLKLTERDRR 441
Query: 300 IARSLMSSEILQE-----NYKEELSLMVHNGQRAEVE 331
+A ++ ++ QE ++ E+ +M+ ++AE++
Sbjct: 442 LAVKMLQRDLCQEYGDEHEWRREIQVMLMLNKKAEIQ 478
>gi|413933051|gb|AFW67602.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 426
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 148/282 (52%), Gaps = 15/282 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V +GLV
Sbjct: 153 QLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLV 208
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D
Sbjct: 209 MGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLAND 265
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
+ I+IT +GYPDI TR L L LP LVD +P G IL T+KFGS+
Sbjct: 266 KFCERNRCIVITGRGYPDIPTRRFLRYLVELL-HLPAYCLVDSDPYGFDILATYKFGSLQ 324
Query: 261 MGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NY 314
+ +A +++WLG+ D + +P+ LL L P D + A +++ L +
Sbjct: 325 LAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREAPEW 384
Query: 315 KEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ EL M+ G + E+EAL + +L +YI +KI Q ++
Sbjct: 385 RSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMHL 426
>gi|413921268|gb|AFW61200.1| hypothetical protein ZEAMMB73_857840 [Zea mays]
Length = 100
Score = 141 bits (355), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/92 (67%), Positives = 80/92 (86%)
Query: 261 MGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSL 320
MG+E+YRYACNVKWLG+RG D+ LIPE + LKPRDLQIA+SLMSS+ LQE+++ EL+L
Sbjct: 1 MGLESYRYACNVKWLGVRGGDLHLIPEDAFQELKPRDLQIAKSLMSSKFLQESHRAELAL 60
Query: 321 MVHNGQRAEVEALYFHGYDYLGKYIAKKIVQA 352
MV G+RA++EALY HG+D+LGKYIA+KI +A
Sbjct: 61 MVERGKRADIEALYSHGFDFLGKYIARKIRRA 92
>gi|413933054|gb|AFW67605.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 148/282 (52%), Gaps = 15/282 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V +GLV
Sbjct: 110 QLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLV 165
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D
Sbjct: 166 MGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLAND 222
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
+ I+IT +GYPDI TR L L LP LVD +P G IL T+KFGS+
Sbjct: 223 KFCERNRCIVITGRGYPDIPTRRFLRYLVELL-HLPAYCLVDSDPYGFDILATYKFGSLQ 281
Query: 261 MGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NY 314
+ +A +++WLG+ D + +P+ LL L P D + A +++ L +
Sbjct: 282 LAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREAPEW 341
Query: 315 KEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ EL M+ G + E+EAL + +L +YI +KI Q ++
Sbjct: 342 RSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMHL 383
>gi|332024438|gb|EGI64636.1| Meiotic recombination protein SPO11 [Acromyrmex echinatior]
Length = 423
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 161/293 (54%), Gaps = 13/293 (4%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTS-QLQVNRTIQDVIALLHC 125
K FV + +M +L T+R +Y L ++ +Y Q V+R + D+ LL C
Sbjct: 140 KKFVLMIMIMAEVHHLLLTNTTKTRRAFYYDLKKETTKYLVPIQRYVDRALNDIANLLEC 199
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
+ + L ++A+++GL+AG + + + ++IDC+ G G I +S + + ++ A+++
Sbjct: 200 APWDLRLLATAKGLMAGNMTITLVDNQIIDCTIPG--GAQIPQIISNI--ISIRAKAKFV 255
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
+V+EK A+FQ+L E+ + IL+T KGYPD+ATR + L+ +LPI +VD +P
Sbjct: 256 LVIEKDAVFQKLLEENCSCSLKCILVTGKGYPDVATRMFVKILSEKM-ELPIYIVVDADP 314
Query: 246 AGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP-EQSLLPLKPRDLQIARS 303
G+ I+ ++FGS + E AC N +WLG+ +LIP +PL DL RS
Sbjct: 315 FGIDIMLIYRFGSSTLCKENESLACPNARWLGIHPS--ELIPIGAKTIPLTEADLIKLRS 372
Query: 304 LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ + + E ++LS++ +AE+EA+ ++ + Y++ KI DYI
Sbjct: 373 IEARSYVNEAISKQLSILRKG--KAEMEAVSSFSKNFFTETYLSYKIDGQDYI 423
>gi|392569898|gb|EIW63071.1| DNA topoisomerase IV alpha subunit [Trametes versicolor FP-101664
SS1]
Length = 389
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 184/345 (53%), Gaps = 26/345 (7%)
Query: 5 IEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL---- 60
+E ++FL+ L P+ ++++S ++ GL D + + + R+L
Sbjct: 4 LEDLTLSFLRQLADALPSPHRPLDTSKRASGKKIFMGL-ADRRKEYTAGNAPMRTLAMPQ 62
Query: 61 -TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
++ +A+ F +++K ++ + L + T+R+++YK + E F SQ V+R + D+
Sbjct: 63 RSRGVSARPFAQLFKTVDLMHEALLDQVPTTKRDMYYKDV----ELFGSQSTVDRLVDDL 118
Query: 120 IALLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
A L SR L + AS++GLV G L + + E ++ S +S D+ E+ D+
Sbjct: 119 AATLQLSRSDLSVRASAKGLVCGSGLRIHLHSGETVELSDSEPVLIPLSEDI---EQFDV 175
Query: 179 KTDARYIIVVEKHAIFQRL------TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
+++VVEK A+FQ L T + + ++IT KGYPD+ATR LL+ L+
Sbjct: 176 DEGLAWVLVVEKEAVFQTLCRLRLGTHPLLPGK--GLVITGKGYPDVATRQLLNALSANL 233
Query: 233 P-DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
P +PIL LVD + G+ IL +KFGS M E + A ++WLGL ++ IP+
Sbjct: 234 PPHIPILCLVDGDAYGIDILSVYKFGSTSMQHEKDQLAAARIQWLGLWSSELAALGIPKD 293
Query: 289 SLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
+L+P+ D + ARSL+ E + ++++EL M+ ++AE+E L
Sbjct: 294 ALIPITKHDEKKARSLLKREGIPSDWRKELQRMLFTRRKAEIEVL 338
>gi|89511867|dbj|BAE86870.1| Spo11 [Anguilla japonica]
Length = 385
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 170/328 (51%), Gaps = 21/328 (6%)
Query: 35 NSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQREL 94
NS V + D S + S C+ S+ + F KVM ++++ T+R++
Sbjct: 72 NSAVGLHMGPDSSTVTTIRSDCSSSVNR------FALTLKVMSAVYKLVQSNTFATKRDI 125
Query: 95 FYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVI 154
+Y + + F +Q V+ + D+ +L R SL ++A+S+G ++G L E + +
Sbjct: 126 YY----NDTQLFRTQRAVDSIVDDISCMLKVPRRSLHVLATSKGFLSGNLSYMEEDGTKV 181
Query: 155 DCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITA 213
+CS+ ++ S + ++ + A+++++VEK A FQRL +D F P I+IT
Sbjct: 182 NCSSASTAVSVSSNVCGIK---NISSHAKFVLIVEKDATFQRLLDDGFCSKLAPCIIITG 238
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ +R ++ +L +PI ALVD +P G+ I+C +K+GS+ M EA +V
Sbjct: 239 KGVPDVNSRLMVRKLWDTL-HVPIFALVDADPHGIEIMCIYKYGSVSMSFEAQNLTVPSV 297
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSE--ILQENYKEELSLMVHNGQRA 328
WLGL D++ +P+ L+P +D SL+ + Q +++E+ M+ Q+A
Sbjct: 298 MWLGLLPSDIERLRLPKDVLIPFSKKDESKLTSLLRRPYVVCQPAWEKEMEKMLKQRQKA 357
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E+++L D+L Y+ K+ +I
Sbjct: 358 EIQSLTSLAPDFLTSVYLPNKLRYGGWI 385
>gi|195644000|gb|ACG41468.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 147/282 (52%), Gaps = 15/282 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
+L Q K ++R+++Y P F V+R I D+ L CSR +L +V +GLV
Sbjct: 110 HLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLV 165
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D
Sbjct: 166 MGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLAND 222
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
+ I+IT +GYPDI TR L L LP LVD +P G IL T+KFGS+
Sbjct: 223 KFCERNRCIVITGRGYPDIPTRRFLRYLVELL-HLPAYCLVDSDPYGFDILATYKFGSLQ 281
Query: 261 MGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NY 314
+ +A +++WLG+ D + +P+ LL L P D + A +++ L +
Sbjct: 282 LAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREAPEW 341
Query: 315 KEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ EL M+ G + E+EAL + +L +YI +KI Q ++
Sbjct: 342 RSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMHL 383
>gi|110760973|ref|XP_001122679.1| PREDICTED: meiotic recombination protein SPO11 [Apis mellifera]
Length = 400
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 161/305 (52%), Gaps = 13/305 (4%)
Query: 57 TRSLTKSNAAK----AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQ- 111
TR +T+ A+K F + VM T ++L +T+R L+Y L ++ + +
Sbjct: 103 TRRVTQDFASKRGKDKFALMMTVMATAHRLLITNTTLTRRSLYYDLKNENTSNLVPEQRC 162
Query: 112 VNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLS 171
+++ + V LL+C+ + L ++ +S+GLVAG L L + VIDC+ G G I S
Sbjct: 163 LDQAVHHVANLLNCAPWDLNLLPTSKGLVAGELTLTLADNRVIDCTVPG--GALIPHLAS 220
Query: 172 LLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
+ + ++ AR +++VEK ++FQ+L ED + + IL+T KGYPD+ATR L+ L+
Sbjct: 221 NV--ISARSRARLVLIVEKDSVFQKLLEDDCTSSLNCILVTGKGYPDVATRMLVKLLSEK 278
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSL 290
+LP+ +VD +P G+ I+C ++FGS + E AC NV+WLG+ ++ + +
Sbjct: 279 L-ELPVYIIVDADPFGIDIMCVYRFGSAALSRERESLACSNVRWLGVHPSELLALGVNT- 336
Query: 291 LPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIV 350
PL DL +L + EL +M G +AE+E + + Y+ KI
Sbjct: 337 APLTEFDLSKLTALEGRPYTTAAFLGELGVMRKLG-KAEIENVSSSRKFLVSTYLPCKIK 395
Query: 351 QADYI 355
DY+
Sbjct: 396 GNDYV 400
>gi|352681956|ref|YP_004892480.1| type II DNA topoisomerase VI subunit A [Thermoproteus tenax Kra 1]
gi|350274755|emb|CCC81401.1| type II DNA topoisomerase VI, subunit A [Thermoproteus tenax Kra 1]
Length = 366
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 140/254 (55%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +G+ A +G V G ++++ E +D S G + S
Sbjct: 116 WDEQAESNGVIEDIEVAANILREEMGVSADVKGKVVGPIVVRSQGYE-LDASKFGETALS 174
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++V+EK AIFQRL + ++Q +ILITAKG PD ATR +
Sbjct: 175 LPVNVDALEIV--KVEASYVLVIEKDAIFQRLVREKFWSQENAILITAKGMPDRATRRFV 232
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G+ I +K GSI + E+ R A K+LG+ D++
Sbjct: 233 RRLNEEYK-LPVYVLTDGDPYGIYIYSVYKSGSIKLSYESERLATPRAKFLGVAPLDIER 291
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
IP+Q ++ RD++ A+ L+ Q E +K+EL + ++ E+EAL HG YL
Sbjct: 292 YKIPDQFVIRATERDIKRAQELLKYPWFQNEIWKKELDYFLKTKKKVEIEALSAHGLKYL 351
Query: 342 GKYIAKKIVQADYI 355
YI KI +I
Sbjct: 352 HDYIKDKIRNNKFI 365
>gi|388556219|dbj|BAM16279.1| Spo11 [Anguilla japonica]
Length = 385
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 170/328 (51%), Gaps = 21/328 (6%)
Query: 35 NSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQREL 94
NS V + D S + S C+ S+ + F KV+ ++++ T+R++
Sbjct: 72 NSAVGLHMGPDSSTVTTIRSDCSSSVNR------FALTLKVLSAVYKLVQSNTFATKRDI 125
Query: 95 FYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVI 154
+Y + + F +Q V+ + D+ +L R SL ++A+S+G ++G L E + +
Sbjct: 126 YY----NDTQLFRTQRAVDSIVDDISCMLKVPRRSLHVLATSKGFLSGNLSYMEEDGTKV 181
Query: 155 DCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITA 213
+CS+ ++ S + ++ + A+++++VEK A FQRL +D F P I+IT
Sbjct: 182 NCSSASTAVSVSSNVCGIK---NISSHAKFVLIVEKDATFQRLLDDGFCSKLAPCIIITG 238
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
KG PD+ +R ++ +L +PI ALVD +P G+ I+C +K+GS+ M EA +V
Sbjct: 239 KGVPDVNSRLMVRKLWDTL-HVPIFALVDADPHGIEIMCIYKYGSVSMSFEAQNLTVPSV 297
Query: 273 KWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSE--ILQENYKEELSLMVHNGQRA 328
WLGL D++ +P+ L+P +D SL+ + Q +++E+ M+ Q+A
Sbjct: 298 MWLGLLPSDIERLRLPKDVLIPFSKKDESKLTSLLRRPYVVCQPAWEKEMEKMLKQRQKA 357
Query: 329 EVEALYFHGYDYLGK-YIAKKIVQADYI 355
E+++L D+L Y+ K+ +I
Sbjct: 358 EIQSLTSLAPDFLTSVYLPNKLRYGGWI 385
>gi|123407440|ref|XP_001303010.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
gi|121884352|gb|EAX90080.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
Length = 384
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 178/333 (53%), Gaps = 20/333 (6%)
Query: 26 LPLINRKSS-NSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILS 84
+P+ +R ++ NS+V L T V + + R T F+RV V+ + L
Sbjct: 69 IPITHRSTAANSQVDPILGTMVQY-EQDQKYLLRFTTNPKYFAVFLRVLAVI---YHSLQ 124
Query: 85 QEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL 144
+ +++R ++Y+ P F SQ VN+ I+ + L +R SLG+++ + VAG L
Sbjct: 125 NGEVISKRSIYYR----EPSLFGSQESVNQAIESICRSLEVNRTSLGVISCPKSFVAGPL 180
Query: 145 MLQEPNQEVIDCSACGSSGYSISGDLSLLEKL-DLKTDARYIIVVEKHAIFQRLTEDFVF 203
++ + +ID S I+ +L++++ + T+A ++V+EK +IF RL + +
Sbjct: 181 KWEDASGNIIDVST------HIAPIPALVDQIIKVSTNAIAVMVIEKESIFMRLVQSKIV 234
Query: 204 NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
++ ILIT +G PD TR+ + L+ + +PI+ L D + G+ I+ FK+GS+
Sbjct: 235 TEV--ILITPRGVPDYNTRYFVRLLDDSL-SIPIVGLFDGDAYGIFIMHLFKYGSMSAAQ 291
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ + AC ++ WLG+R D+ + +L + ++ +I R++++ + L E +K+E+ L++
Sbjct: 292 DGHAMACPHMMWLGIRPSDLNFLSSNEMLTITDKEEKILRNILTFDHLSEEWKKEIKLIL 351
Query: 323 HNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
++AE+EAL + Y+ +K D+I
Sbjct: 352 ETKRKAEIEALCNSTNYLIDLYLPQKFANHDWI 384
>gi|221054093|ref|XP_002261794.1| topoisomerase [Plasmodium knowlesi strain H]
gi|193808254|emb|CAQ38957.1| topoisomerase, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 165/291 (56%), Gaps = 15/291 (5%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
R V++ ++ Q+K TQR ++YKL F+ Q Q NR I V +L R
Sbjct: 53 GLCRTVSVVQLVNDMVIQDKSCTQRGIYYKLY----NLFSEQCQANRHILHVCHILGFPR 108
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIV 187
SL + AS +G + G L+L++ N+ + +G I+ SLL +++ A YI+V
Sbjct: 109 ASLNVYASEKGCIGGLLVLRKNNERLKLNEL--ENGLMIND--SLLNVDHVESQANYILV 164
Query: 188 VEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
VEK++++Q+L E ++N +P ILIT KG PD +TR ++ L F L + + D++P G
Sbjct: 165 VEKYSLYQKLCEKEIWNILPCILITGKGVPDFSTRKIICELVELF-QLECVYVGDYDPYG 223
Query: 248 LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMS 306
I ++K G E +AC N++W+G+ D++LIP+++LLPL RD + R++++
Sbjct: 224 FRIYLSYKEGC--KTNEDDIFACTNMRWIGMNSQDIELIPKEALLPLSMRDKNVLRNMLN 281
Query: 307 SEILQENYK--EELSLMVHNGQRAEVEALYFHGYD-YLGKYIAKKIVQADY 354
L+ + K E++ M ++ E+EA+ G D ++ +Y+ +++++ ++
Sbjct: 282 GHNLKCSAKVRTEITQMEKLSKKFEIEAMESLGTDFFIREYLIRRVMRREW 332
>gi|297722559|ref|NP_001173643.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|31712057|gb|AAP68363.1| putative topoisomerase 6 [Oryza sativa Japonica Group]
gi|40539002|gb|AAR87259.1| putative DNA topoisomerase (with alternative splicing) [Oryza
sativa Japonica Group]
gi|53127614|emb|CAD71263.1| putative topoisomerase VI subunit A [Oryza sativa Indica Group]
gi|108711121|gb|ABF98916.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|150371041|dbj|BAF65344.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|218193764|gb|EEC76191.1| hypothetical protein OsI_13532 [Oryza sativa Indica Group]
gi|222625809|gb|EEE59941.1| hypothetical protein OsJ_12593 [Oryza sativa Japonica Group]
gi|255674904|dbj|BAH92371.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|269859219|gb|ACZ52153.1| topoisomerase 6 subunit A-like protein [Oryza sativa Japonica
Group]
Length = 381
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 15/276 (5%)
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML 146
K ++R+++Y P F Q V+R I D+ L CSR +L +V ++GLV G +
Sbjct: 114 KHCSKRDIYYMY----PSIFQEQAVVDRAINDICVLFKCSRHNLNVVPVAKGLVMGWIRF 169
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI 206
E +EV C ++ +SI + ++ D+ + A YI++VEK +FQRL D +
Sbjct: 170 LEGEKEVY-CVTNVNAAFSIPVSIEAIK--DVVSVADYILIVEKETVFQRLANDKFCERN 226
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA- 265
I+IT +GYPDI TR L L LP+ LVD +P G IL T+KFGS+ + +A
Sbjct: 227 RCIVITGRGYPDIPTRRFLRYLVEQL-HLPVYCLVDADPYGFDILATYKFGSLQLAYDAN 285
Query: 266 YRYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NYKEELSL 320
+ +++WLG+ D + +P+ LL L D + A ++S L ++ EL
Sbjct: 286 FLRVPDIRWLGVFTSDFEDYRLPDCCLLHLSSEDRRKAEGILSRCYLHREAPQWRLELEA 345
Query: 321 MVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
M+ G + E+EAL +L +YI KKI Q +I
Sbjct: 346 MLQKGVKFEIEALSACSISFLSEEYIPKKIKQGRHI 381
>gi|156082001|ref|XP_001608493.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801064|gb|EDL42469.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 334
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 166/290 (57%), Gaps = 13/290 (4%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
R V+E ++ Q+K TQRE++YKL F+ Q Q NR I V +L R
Sbjct: 53 GLCRTVSVVELVNDMVIQDKSCTQREIYYKLY----HLFSEQCQTNRHILHVCHILGFPR 108
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIV 187
SL + AS +G + G L+L++ N E ++ + +G I+ SLL+ +++ A YI+V
Sbjct: 109 ASLNVYASEKGCIGGLLVLRK-NNERLNLNEV-ENGLMIND--SLLKVDRVESQANYILV 164
Query: 188 VEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
VEK++++Q+L E ++N +P ILIT KG PD +TR ++ L F L + + D++P G
Sbjct: 165 VEKYSLYQKLCEKEIWNILPCILITGKGVPDFSTRKIICELVELF-QLECVYVGDYDPYG 223
Query: 248 LAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSS 307
I ++K G +A +++W+G+ D+ LIP+++LL L RD + R+++S
Sbjct: 224 FRIYLSYKEGC-KTNEDAIFPCADMRWVGMNSQDMSLIPKEALLALSQRDKNVLRNMLSG 282
Query: 308 EILQENYK--EELSLMVHNGQRAEVEALYFHGYD-YLGKYIAKKIVQADY 354
+ L+ + K E++ M ++ E+EA+ G D ++ +Y+ +++++ ++
Sbjct: 283 DSLKCSAKVRREITQMEKLSRKFEIEAMESLGMDFFIREYLIRRVMRREW 332
>gi|380015951|ref|XP_003691957.1| PREDICTED: meiotic recombination protein SPO11-like [Apis florea]
Length = 404
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 26/288 (9%)
Query: 57 TRSLTKSNAAK----AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCD-SPEYFTSQLQ 111
TR +T+ A+K F + VM T ++L +T+R L+Y L + + Q
Sbjct: 96 TRRVTQDFASKRGKDKFALMMTVMATAHRLLITNTTLTRRSLYYDLKNERTSNLVPEQRC 155
Query: 112 VNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACG-------SSGY 164
+++ + V LL+C+ + L ++ +S+GLVAG L L + +IDC+ G +S Y
Sbjct: 156 LDQAVHHVANLLNCAPWELNLLPTSKGLVAGELTLALADDRIIDCTVPGGALIPHLASNY 215
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
IS ++ A+ +++VEK A+FQ+L ED + + ILIT KGYPD+ATR L
Sbjct: 216 VISA----------RSRAKLVLIVEKDAVFQKLLEDDCTSSLNCILITGKGYPDVATRML 265
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+ L+ +LP+ +VD +P G+ I+C ++FGS + E AC NV+WLG+ ++
Sbjct: 266 VKLLSEKL-ELPVYIIVDADPFGVDIMCVYRFGSAALSRERETLACSNVRWLGIHPSELL 324
Query: 284 LIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVE 331
+ + PL DL +L L + E+ +M G +AE+E
Sbjct: 325 ALGVNT-APLTEFDLSKLTALEGRPYLTGAFLREVGVMRRLG-KAEIE 370
>gi|157137100|ref|XP_001663887.1| meiotic recombination protein spo11 [Aedes aegypti]
gi|108869811|gb|EAT34036.1| AAEL013701-PA [Aedes aegypti]
Length = 707
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 162/288 (56%), Gaps = 17/288 (5%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
FV + ++ F++L+ T+REL+Y+ +P+ +Q V+ ++DV LL +
Sbjct: 429 FVLIVFLLSEIFRMLASGSSCTKRELYYR----NPQITINQRCVDECLRDVCFLLKADLW 484
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
L + SS+GL+AG + Q +E IDC S G I D++ L L ++ DA +++V
Sbjct: 485 ELNVFCSSKGLIAGPVKFQSKLEETIDC--FNSFGTQIPTDVNGL--LSIELDADLVLIV 540
Query: 189 EKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
EK +F+RL +D + ++ I++T+KGYPD+ATR LL ++ +P+ ALVD +P
Sbjct: 541 EKDTVFRRLLDDGILTRLSKKIIVVTSKGYPDVATRLLLKKIWDKHR-IPMYALVDADPF 599
Query: 247 GLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLM 305
G+ I C +KFGS+ + ++ A +++WLGLR ++ + LLPL PRD R L+
Sbjct: 600 GIEIYCVYKFGSLALSHQSSHLAVPSIQWLGLRPSHT-VLLDLKLLPLTPRDESRIRELL 658
Query: 306 SSEILQE---NYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKI 349
+ + + EL ++ N +AE+E+L DYL +Y+ ++
Sbjct: 659 RRPYIGQPGCELERELKMLRENNGKAEIESLADISVDYLISEYLPNQL 706
>gi|170033806|ref|XP_001844767.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
gi|167874844|gb|EDS38227.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
Length = 411
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 156/284 (54%), Gaps = 16/284 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N F+ + +M F++L+ ++REL+Y+ P+ SQ V++ +QDV LL
Sbjct: 113 NGRHQFLLIIFLMSEIFKLLTLRTSCSKRELYYR----DPQLTHSQRTVDKGLQDVCFLL 168
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
+ + L + +SS+GLVAG L + +QE++DC S G I D +L +++ DA
Sbjct: 169 EANLWELNVFSSSKGLVAGPLKFRSKHQEMVDCH--NSLGTLIPAD--VLGLMEISVDAE 224
Query: 184 YIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
+++VEK +F+RL ED + +++ +L+T+KGYPD+ TR LL ++ + +P+ ALV
Sbjct: 225 MVLIVEKDTVFRRLLEDRILDRMSRKLLLVTSKGYPDVGTRLLLQKIWTTY-RIPMFALV 283
Query: 242 DWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
D +P G+ I C +KFGS+ + ++ Y ++W+G+R + L+ LPL RD
Sbjct: 284 DADPFGIEIYCVYKFGSLALSHQSQYLAVPAIRWIGVRPSHIPLL-GLKPLPLNGRDRAR 342
Query: 301 ARSLMSSEILQE---NYKEELSLMVHNGQRAEVEALYFHGYDYL 341
L+ + + EL LM +AE+E+L DYL
Sbjct: 343 IDELLKRPYIGKAGCELARELRLMSELDVKAEIESLVDISTDYL 386
>gi|84784010|gb|ABC61970.1| SPO11-like protein [Trichomonas vaginalis]
Length = 384
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 178/333 (53%), Gaps = 20/333 (6%)
Query: 26 LPLINRKSS-NSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILS 84
+P+ +R ++ NS+V L T V + + R T F+RV V+ + L
Sbjct: 69 IPITHRSTAANSQVDPILGTMVQY-EQDQKYLLRFTTNPKYFAVFLRVLAVI---YHSLQ 124
Query: 85 QEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL 144
+ +++R ++Y+ P F SQ VN+ I+ + L +R +LG+++ + VAG L
Sbjct: 125 NGEVISKRSIYYR----EPSLFGSQESVNQAIESICRSLEVNRTALGVISCPKSFVAGPL 180
Query: 145 MLQEPNQEVIDCSACGSSGYSISGDLSLLEKL-DLKTDARYIIVVEKHAIFQRLTEDFVF 203
++ + +ID S I+ +L++++ + T+A ++V+EK +IF RL + +
Sbjct: 181 KWEDASGNIIDVST------HIAPIPALVDQIIKVSTNAIAVMVIEKESIFMRLVQSKIV 234
Query: 204 NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
++ ILIT +G PD TR+ + L+ + +PI+ L D + G+ I+ FK+GS+
Sbjct: 235 TEV--ILITPRGVPDYNTRYFVRLLDDSL-SIPIVGLFDGDAYGIFIMHLFKYGSMSAAQ 291
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ + AC ++ WLG+R D+ + +L + ++ +I R++++ + L E +K+E+ L++
Sbjct: 292 DGHAMACPHMMWLGIRPSDLNFLSSNEMLTITDKEEKILRNILTFDHLSEEWKKEIKLIL 351
Query: 323 HNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
++AE+EAL + Y+ +K D+I
Sbjct: 352 ETKRKAEIEALCNSTNYLIDLYLPQKFANHDWI 384
>gi|323456369|gb|EGB12236.1| hypothetical protein AURANDRAFT_61362 [Aureococcus anophagefferens]
Length = 1086
Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 6/184 (3%)
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
++++DAR ++VVEK IF+RL ED F + P +L+T G PDIATR L+H+L R D+P
Sbjct: 13 EVESDARCVVVVEKDGIFRRLVEDRFFERYPCVLVTGMGVPDIATRALVHKL-RGSLDVP 71
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLK 294
+ LVDWN G+ +L +K GS +G+EA RY +VKW+GLR V +P PL
Sbjct: 72 VYGLVDWNSWGVGVLLCYKVGSARLGLEAVRYTVDVKWIGLRSSQVDRLELPASCRQPLT 131
Query: 295 PRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHG-YDYLGKYIAKKIVQ 351
RD + A L++ + + ++ EL + G + E+EAL+ G D +G +I I
Sbjct: 132 DRDRRRAEGLLAHPWVATKPAWQRELRRQLDLGSKCELEALFAGGDLDAVGAFIETAITT 191
Query: 352 ADYI 355
DY+
Sbjct: 192 QDYL 195
>gi|327310402|ref|YP_004337299.1| DNA topoisomerase [Thermoproteus uzoniensis 768-20]
gi|326946881|gb|AEA11987.1| DNA topoisomerase (ATP-hydrolyzing) [Thermoproteus uzoniensis
768-20]
Length = 357
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 140/254 (55%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +GI A +G V G ++++ E +D S G + S
Sbjct: 107 WDEQAESNGVIEDIEVATNILREEMGISADVKGKVVGPIVVRSQGYE-LDASKFGETALS 165
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++V+EK AIFQRL + ++Q ++LITAKG PD ATR +
Sbjct: 166 LPVNVDALEIV--KVEASYVLVIEKDAIFQRLVREKFWSQENAVLITAKGMPDRATRRFV 223
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G+ I +K GSI + E+ R A K+LG+ D++
Sbjct: 224 KRLNEEY-RLPVYVLTDGDPYGIYIYSVYKSGSIKLSYESERLATPKAKFLGVAPLDIER 282
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYL 341
IP+Q ++ RD++ A+ L+ Q + +K+EL + ++ E+EAL HG YL
Sbjct: 283 YKIPDQFVIRATDRDIKRAQELLKYPWFQNDVWKKELEYFLKTKKKVEIEALSAHGLKYL 342
Query: 342 GKYIAKKIVQADYI 355
YI KI +I
Sbjct: 343 HDYIKDKIRGNKFI 356
>gi|401398583|ref|XP_003880351.1| unnamed protein product [Neospora caninum Liverpool]
gi|325114761|emb|CBZ50317.1| unnamed protein product [Neospora caninum Liverpool]
Length = 340
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 148/267 (55%), Gaps = 14/267 (5%)
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEV 153
LFY+L+ F +Q QVN +Q +++ L R L + AS +GLVAG L + +
Sbjct: 83 LFYRLV----NVFDTQAQVNVQLQQIVSWLEIPRDCLNVFASQKGLVAGMLTFLKGSL-T 137
Query: 154 IDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITA 213
+DC G+ G IS +LLE +++ A YIIVVEK A+FQ L E ++N IP ILIT
Sbjct: 138 LDCRRTGT-GVLISE--TLLEVDKIESHASYIIVVEKDAVFQTLCEQQIWNIIPCILITG 194
Query: 214 KGYPDIATRFLLHRLNRAF--PDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN 271
KG+PD ATR LL L + + D++P G++I ++++GS R A
Sbjct: 195 KGFPDFATRKLLRHLQMSLNIESFQCGYVGDFDPHGISIFLSYQYGSKAFEGPLVRCAV- 253
Query: 272 VKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ--ENYKEELSLMVHNGQRAE 329
+ W+GL +D++ +P L L RD + +SL+ ++ E KE+ M+ + + E
Sbjct: 254 LHWIGLCSEDLKQLPLDVRLCLLNRDRALLKSLLVHPKIRNCERLKEQCLFMMEHDTKFE 313
Query: 330 VEALYFHGYDYLGK-YIAKKIVQADYI 355
+EA+ G+DYL + YI KI++ +I
Sbjct: 314 IEAITSLGFDYLARYYIPSKILKRTWI 340
>gi|389582748|dbj|GAB65485.1| topoisomerase [Plasmodium cynomolgi strain B]
Length = 334
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 168/291 (57%), Gaps = 15/291 (5%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
R V++ ++ Q+K TQRE++YKL F+ Q Q NR I V +L R
Sbjct: 53 GLCRTVSVVQLVNDMVIQDKSCTQREIYYKLY----NLFSEQCQTNRHILHVCHILGFPR 108
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIV 187
SL + AS +G + G L+L++ N E ++ + +G I+ SLL+ +++ A YI+V
Sbjct: 109 ASLNVYASEKGCIGGLLVLRKKN-ERLNLNEL-ENGLMIND--SLLKVDRVESQANYILV 164
Query: 188 VEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
VEK++++Q+L E ++N +P ILIT KG PD +TR ++ L F L + + D++P G
Sbjct: 165 VEKYSLYQKLCEKEIWNILPCILITGKGVPDFSTRKIICELVELFQ-LECVYVGDYDPYG 223
Query: 248 LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMS 306
I ++K G E +AC +++W+G+ D+ LIP+++LL L RD + R++++
Sbjct: 224 FRIYLSYKEGC--KTNEDAIFACTDMRWVGMNSQDMDLIPKEALLELSKRDKNVLRNMLN 281
Query: 307 SEILQ--ENYKEELSLMVHNGQRAEVEALYFHGYD-YLGKYIAKKIVQADY 354
+ L+ ++E++ M ++ E+EA+ G D ++ +Y+ +++++ ++
Sbjct: 282 GDRLRCSAKVRKEITQMEKLSRKFEIEAMESLGMDFFIRQYLIRRVMRREW 332
>gi|10172604|dbj|BAB01408.1| DNA topoisomerase VI, subunit A [Arabidopsis thaliana]
Length = 357
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 150/283 (53%), Gaps = 25/283 (8%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG----IVASS 136
Q+L + + ++R+++Y P F +Q V+R I D+ L CSR++L I+
Sbjct: 79 QLLQENRHASKRDIYYM----HPSAFKAQSIVDRAIGDICILFQCSRYNLNVIHLIILLC 134
Query: 137 RGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQR 196
LV G L +E ++ DC ++ Y + + +E D+ + A YI+VVEK +FQR
Sbjct: 135 CRLVMGWLKFREAGRK-FDCLNSLNTAYPVPVLVEEVE--DIVSLAEYILVVEKETVFQR 191
Query: 197 LTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKF 256
L D I+IT +GYPD++TR L L LP+ LVD +P G IL T++F
Sbjct: 192 LANDMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKL-HLPVHCLVDCDPYGFEILATYRF 250
Query: 257 GSIGMG--MEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQ-----IARSLMSS 307
GS+ M +E+ R A ++KWLG D ++ +P+Q LLPL D + + R +
Sbjct: 251 GSMQMAYDIESLR-APDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKR 309
Query: 308 EILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
E+ Q ++ EL M+ G + E+EAL H +L + YI KI
Sbjct: 310 EMPQ--WRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKI 350
>gi|255563518|ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223537999|gb|EEF39612.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 373
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 27/310 (8%)
Query: 59 SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQD 118
+L K A+ + +V+ Q+L + K ++R+++Y P F+ Q V++ I D
Sbjct: 66 TLKKECNARRIDVMLRVLVIVQQLLQENKHGSKRDIYYM----HPSVFSDQSVVDQAIND 121
Query: 119 VIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
+ +L CSR +L +V+ GLV G L E ++ DC ++ + I + + E D+
Sbjct: 122 ICIILQCSRHNLNVVSVGTGLVMGWLRFLEAGRK-FDCINSPNNVHPIP--IHVEEVKDI 178
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+ A+YI+VVEK ++FQRL D+ N I+IT +GYPDI TR L L LP+
Sbjct: 179 VSVAKYILVVEKESVFQRLANDWFCNAHRCIVITGRGYPDIPTRRFLRLLLEKL-GLPVY 237
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQL--IPEQSLLPLKP 295
LVD +P G IL T++FGS+ M +A + ++WLG D++ +P+ LLPL
Sbjct: 238 CLVDCDPYGFDILTTYRFGSMLMAYDAKFLRVPEIRWLGAFPSDLEKYGLPQHCLLPLTD 297
Query: 296 RDLQIARSLMSSEILQENYKE---------------ELSLMVHNGQRAEVEALYFHGYDY 340
D + +++ LQ E EL M+ G + E+EAL H +
Sbjct: 298 EDRRRTETMLLRCYLQREAPEWSYIMKWYYLFHERLELESMLQRGVKFEIEALSVHSLSF 357
Query: 341 LGK-YIAKKI 349
L + YI KI
Sbjct: 358 LSELYIPSKI 367
>gi|242038091|ref|XP_002466440.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
gi|241920294|gb|EER93438.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
Length = 383
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 143/273 (52%), Gaps = 15/273 (5%)
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML 146
K ++R+++Y P F V+R I D+ LL CSR +L +V +GLV G +
Sbjct: 116 KHCSKRDIYYMY----PSIFVEVAVVDRAINDICILLKCSRHNLNVVPVVKGLVMGWIRF 171
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI 206
E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D +
Sbjct: 172 VEGEKKVY-CITNVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLANDKFCERN 228
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY 266
I+IT +GYPDI TR L L LP LVD +P G IL T+KFGS+ + +A
Sbjct: 229 RCIVITGRGYPDIPTRRFLRYLVEQL-HLPAYCLVDSDPYGFDILATYKFGSLQLAHDAN 287
Query: 267 RYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NYKEELSL 320
+++WLG+ D + +P+ LL L P D + A +++ L ++ EL
Sbjct: 288 LLRVPDIRWLGVFTSDFEEYCLPDCCLLHLSPEDRRKAERILARCYLHREVPEWRSELEA 347
Query: 321 MVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQA 352
M+ G + E+EAL + +L +YI +KI Q
Sbjct: 348 MLQKGVKFEIEALSANSISFLSDEYIPQKIKQG 380
>gi|119872373|ref|YP_930380.1| DNA topoisomerase VI subunit A [Pyrobaculum islandicum DSM 4184]
gi|119673781|gb|ABL88037.1| Spo11/DNA topoisomerase VI, subunit A, N-terminal domain protein
[Pyrobaculum islandicum DSM 4184]
Length = 367
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 138/254 (54%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +GI A +G + G ++++ E +D S G + S
Sbjct: 117 WDEQTESNTVIEDIEVATNVLREEMGISADVKGKIVGPIVVRSQGYE-LDASKFGETALS 175
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++VVEK AIFQRL + ++Q +IL+TAKG PD ATR +
Sbjct: 176 LPVNVDALEII--KVEAAYVLVVEKDAIFQRLVREKFWSQENAILVTAKGMPDRATRRFI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A N K+LGL D+
Sbjct: 234 RRLNEEYK-LPVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPNAKFLGLTATDIDA 292
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYL 341
I + ++ RD++ A+ L+ Q+ + +E++L + ++ E+EAL HG +L
Sbjct: 293 YKISDNYVIAANDRDIKRAQELLRYPWFQKPEWTKEINLFLKKKKKVEIEALSTHGLKFL 352
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 353 HDYLRDKIRNQKFI 366
>gi|303273422|ref|XP_003056072.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462156|gb|EEH59448.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 334
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Query: 53 HSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
H+F S + +++ + + +V++ +LS+ VT+R+LFY + F Q
Sbjct: 127 HTFT--SFSNTSSVRKVAILTRVLQLVHGVLSRGIHVTKRDLFYT----DVKLFKDQKDS 180
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ + D+ LL C+R SL +VAS +G+V GRL+ E E IDC+ G G +I ++
Sbjct: 181 DGVLDDISCLLGCTRNSLHVVASEKGVVVGRLIYTEDGDE-IDCTKMGIGGKAIPSNIDK 239
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
+ + ++DA+++++VEK A F RL ED +N+ P ++ITAKG PD+ATR L +L R
Sbjct: 240 VT--NFRSDAKFVLLVEKDAAFMRLAEDRFYNRFPCVIITAKGQPDVATRLFLSKLKRDL 297
Query: 233 PDLPILALVDWNPAGLAILCTF 254
+P+LALVD +P GL I+ +
Sbjct: 298 R-IPVLALVDADPYGLKIISVY 318
>gi|357115345|ref|XP_003559449.1| PREDICTED: meiotic recombination protein SPO11-1-like [Brachypodium
distachyon]
Length = 383
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 15/282 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L Q K ++R+++Y P F Q V+R I D+ L CSR +L +V ++GLV
Sbjct: 110 QLLQQNKHCSKRDIYYMY----PSIFIEQAVVDRAINDICILFKCSRHNLNVVPVAKGLV 165
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI + ++ D+ + A YI+VVEK +FQRL D
Sbjct: 166 MGWIRFVEGEKKVY-CITNVNAAFSIPVSIETIK--DIVSVAHYILVVEKETVFQRLAND 222
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
+ I+IT +GYPD+ TR L L LP LVD +P G IL T+KFGS+
Sbjct: 223 KFCERNRCIVITGRGYPDVPTRRFLRHLVEQL-HLPAYCLVDSDPYGFDILATYKFGSMQ 281
Query: 261 MGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NY 314
+ +A ++WLG+ D + +P+ LL L D + +++ L +
Sbjct: 282 LAYDANLLRVPGIRWLGVFTSDFEEYCLPDYCLLDLSSEDRKKLEGILTRCYLHREAPEW 341
Query: 315 KEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+ EL M+ G + E+EAL +L + YI +KI +I
Sbjct: 342 RAELEAMLEKGVKFEIEALSASSISFLSQEYIPQKIKLGRHI 383
>gi|348676336|gb|EGZ16154.1| hypothetical protein PHYSODRAFT_506531 [Phytophthora sojae]
Length = 376
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 177/369 (47%), Gaps = 57/369 (15%)
Query: 4 RIEVSVINFLKILNSPDPAISDLPLINRKSS-------NSRVSQGLLTDVSWIFLSHSFC 56
RIE +FL+ L+ D + +L + R SS N R G
Sbjct: 48 RIEALAADFLERLS--DGKLLELEALKRNSSALVYDHQNQRQIHG--------------N 91
Query: 57 TRSLTKSN--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNR 114
R K N + + +W +++T +L++ K TQR+++Y +F Q + +
Sbjct: 92 ERRFVKLNRQGGRRYTGIWLILQTAHALLTENKTATQRDVYYL-----HPFFKGQSEADE 146
Query: 115 TIQDVIALLHCSRFSLGIVASSRGLVAG--RLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
I D ++L R + IV +++G G ++++ C SG +S L
Sbjct: 147 AILDAGSILGVPRGCMNIVGATKGCFTGDISILVRGAPAHRDGCWRHFGSGEEVSITQEL 206
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
L+ LK ED + +PSILIT +G+PD+ATR + L+ A
Sbjct: 207 LQ---LKPSD---------------VEDKFYKMVPSILITGRGFPDLATRVFVSLLSHAL 248
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL--IPEQSL 290
+P+L L D NP GL+I+ T+K GS M +E+ YA ++KW+G+R + +P+ S
Sbjct: 249 -KIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAVDIKWVGVRPSQIAALGLPQSSF 307
Query: 291 LPLKPRDLQIARSLMSSEILQ--ENYKEELSLMVHNG--QRAEVEALYFHGYDYLGKYIA 346
L +D+ +A SL+ + +Q E+Y++E+ + + + + E+EAL+F G+ +L ++
Sbjct: 308 KALTRKDIAVANSLLQASFVQANEHYRDEVQMWLEDSLPWKIELEALHFLGFTFLTSFLQ 367
Query: 347 KKIVQADYI 355
I + +++
Sbjct: 368 DCIQEGNFL 376
>gi|158287917|ref|XP_309793.4| AGAP010898-PA [Anopheles gambiae str. PEST]
gi|157019418|gb|EAA05541.4| AGAP010898-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 155/273 (56%), Gaps = 17/273 (6%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLL--CDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG 131
+++ T +Q+L+ T+REL+Y L +P Y + T++DV ALL + L
Sbjct: 4 QLLATIYQLLTTGSSCTKRELYYLHLELAQTPAYTYA------TLEDVCALLDADPWELH 57
Query: 132 IVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
+ +S+GL+AG ++L + + IDC+ G G ++ D+ + ++ L A+ ++VVEK
Sbjct: 58 VYNTSKGLIAGPIVLTLSDGQRIDCN--GRWGTAVPLDVGSVTEIRLA--AKLVLVVEKD 113
Query: 192 AIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
+F+RL ED + + P +LITAKGYPD++TR LL +++ + +PI L+D +P G+
Sbjct: 114 TVFKRLLEDGILSTFPDTLVLITAKGYPDVSTRLLLKKISD-WTHVPIYGLMDADPHGIE 172
Query: 250 ILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSE 308
I C +KFGS+ M + A ++W+GL D++L+ Q +PL+ +L+ +
Sbjct: 173 IFCVYKFGSLAMVHQQRSLAVPTMRWIGLFPSDIELLGLQG-VPLREGELKRIEQMTKRP 231
Query: 309 ILQENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
+ + + EL L+ + E+E+LY D++
Sbjct: 232 YTEGHIQRELLLLRQLATKVEIESLYNIASDFI 264
>gi|358056024|dbj|GAA98369.1| hypothetical protein E5Q_05055 [Mixia osmundae IAM 14324]
Length = 425
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 146/269 (54%), Gaps = 11/269 (4%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ +A+ + +++E + + VT+REL+Y P+ F Q V+R + +
Sbjct: 124 ARSARDLTSLLRLIELSMTAMDDRRIVTKRELYYA----DPQLFQRQKTVDRLVDPLAHT 179
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
+ +RF + IVA+++GL AG L+L ++D GS+ + L+ +D+ +A
Sbjct: 180 IDRTRFDINIVAAAKGLFAGALVLTSSEGTMLD--GRGSTTGCLIPPAELVSSIDI-LNA 236
Query: 183 RYIIVVEKHAIFQRLTEDFVF---NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
R++IV+EK A+F+ L + P I+IT +GY D+ATR L+ R++R L I A
Sbjct: 237 RWVIVLEKEAVFRSLAHLLPMLEADHGPGIIITGRGYADLATRSLIARISREDRLLTIAA 296
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDL 298
LVD +P G+ IL ++ G++ +A C + WLGLR +D+ LPL RD
Sbjct: 297 LVDGDPHGIDILACYRHGTLRHSGKAADLVCPRMIWLGLRQNDLDECSLVRWLPLTERDR 356
Query: 299 QIARSLMSSEILQENYKEELSLMVHNGQR 327
++A S+++ L + K+ELS M+ N ++
Sbjct: 357 RLATSMLARPTLDDEVKQELSRMLWNHRK 385
>gi|18313188|ref|NP_559855.1| DNA topoisomerase VI subunit A [Pyrobaculum aerophilum str. IM2]
gi|18160702|gb|AAL64037.1| DNA topoisomerase VI (type II ) subunit a [Pyrobaculum aerophilum
str. IM2]
Length = 367
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 137/254 (53%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +G+ A +G + G ++++ E +D S G + S
Sbjct: 117 WDEQSESNAVIEDIEVATNVLREEMGVSADVKGKIVGPIVVRSQGYE-LDASKFGETALS 175
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++VVEK AIFQRL + ++Q +IL+TAKG PD ATR +
Sbjct: 176 LPVNVDALEIV--KVEASYVLVVEKDAIFQRLVREKFWSQEGAILVTAKGMPDRATRRFI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A + K+LGL D+
Sbjct: 234 RRLNEEYK-LPVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDT 292
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYL 341
I + ++ RD++ A+ L+ Q+ + E++L + ++ E+EAL HG +L
Sbjct: 293 YKISDNYVIAANDRDIKRAQELLRYPWFQKPEWTREINLFLKKKKKVEIEALSTHGLKFL 352
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 353 HDYLRDKIRSKKFI 366
>gi|407396212|gb|EKF27401.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi
marinkellei]
Length = 455
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 63/304 (20%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L P+ Q +NR IQ ++ ++ R LG+V +RG V G +
Sbjct: 129 TQRDVYYRLARLVPD----QGYINRAIQQLVQIIGIPRQWLGVVPGTRGCVGGSISFHG- 183
Query: 150 NQEVIDCSACGSSGY---SISGDLSLLEK-----------------LDLKTDARYIIVVE 189
+D GS G + +L ++++ ++ RYIIVVE
Sbjct: 184 ----VDLRCYGSEGLPLPTTQEELRVVQENVDRTAGFNKDDVPFIGFEIHGKTRYIIVVE 239
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
KHA+F RL E+ +F ++P +L+T+ G+P +A R LL L+RA +P++ALVD+NP+GL+
Sbjct: 240 KHAVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQHVPLVALVDYNPSGLS 299
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLR------GDDVQLIPEQS----------LLPL 293
IL +K+G+ GM Y + WLGLR G D + + LLP
Sbjct: 300 ILQQYKYGAGGMRESQYAAVHALHWLGLRTHHITEGRDPNFVDSHTNLDSEPFSLRLLPR 359
Query: 294 KP------RDLQIARSLMS------------SEILQENYKEELSLMVHNGQRAEVEALYF 335
P RD+ + +L+S + + + EE M H + E+E LY
Sbjct: 360 LPFQRFSQRDVVMMANLLSRWHGIREGCEWKNNDADKAWYEEALKMQHLRVKVELEVLYQ 419
Query: 336 HGYD 339
HG D
Sbjct: 420 HGTD 423
>gi|194697080|gb|ACF82624.1| unknown [Zea mays]
gi|414866233|tpg|DAA44790.1| TPA: hypothetical protein ZEAMMB73_994877 [Zea mays]
Length = 200
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 114/184 (61%), Gaps = 7/184 (3%)
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+++DA +I++VEK A F RL ED +N+ P I++TAKG PD+ATR L RL LP+
Sbjct: 18 IESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVEL-KLPV 76
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLK 294
LALVD +P GL IL + GS M ++ ++KWLG+R D+ +PEQ LP+
Sbjct: 77 LALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMT 136
Query: 295 PRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQ 351
D+++ + L+ + +++N + +EL M+ Q+AE++AL G+ YL + Y+ K+ +
Sbjct: 137 DHDIKVGKELLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQE 196
Query: 352 ADYI 355
D+I
Sbjct: 197 QDWI 200
>gi|405969559|gb|EKC34523.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 614
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 155/277 (55%), Gaps = 18/277 (6%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
+ K F + K++ ++++ T+R+L+Y+ F +Q ++ +++V ++
Sbjct: 326 SIKKFTLMMKLLSMIYRLIQTGSFCTKRDLYYQ----DTTLFGNQTALDEALENVSCMIQ 381
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
R+ L ++A+S+G +AG L + + +DCS +G + + LE + +TDA +
Sbjct: 382 VPRWRLHVLATSKGCIAGNLCFHDVDGNYVDCSQT-KAGIQVPSHIEGLEHI--QTDADF 438
Query: 185 IIVVEKHAIFQRL-TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF-PDLPILALVD 242
++VVEK AIFQRL +E F P I+IT KG+PD+ TR LL+RL R F P I LVD
Sbjct: 439 VLVVEKDAIFQRLLSEGFCERMRPCIVITGKGFPDMNTRMLLNRLWREFSPKFYI--LVD 496
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQ 299
+P G+ I+ +K+GS + EA ++WLG+ D+Q + + S + LK D
Sbjct: 497 ADPYGIEIMTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKDDSFIDLKLSDRN 556
Query: 300 IARSLMSSEILQEN---YKEELSLMVHNGQRAEVEAL 333
+++ + ++ YK EL++++ G++AE+E+L
Sbjct: 557 KITDILARPYISKSQLLYK-ELNVLLDLGKKAEIESL 592
>gi|170092549|ref|XP_001877496.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
gi|164647355|gb|EDR11599.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
Length = 315
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 155/290 (53%), Gaps = 19/290 (6%)
Query: 56 CTRSLTKSN--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVN 113
C R KS +A+ ++ ++++ + + T+R++FYK + F +Q V+
Sbjct: 29 CIRYPKKSTTGSARPLAQLMRLLDLTHEAILDGLPATKRDIFYKDVA----LFKTQKVVD 84
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ D+ A R L I AS++GL++G L +Q + EVI S D+
Sbjct: 85 NLVDDLAATFQIERSDLNIRASTKGLISGAGLTIQLLSGEVIQLIDTEGSIIPAGEDI-- 142
Query: 173 LEKLDLKTDARYIIVVEKHAIFQ---RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
E + D ++++VEK A+FQ RL V + + S L KGYPD+ATR L+ L
Sbjct: 143 -ESFSVDEDVAWVLIVEKEAVFQTLCRLGITDVDSIVYSRLFQGKGYPDVATRHLVKSLA 201
Query: 230 RAFP-DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQL--I 285
A P +PI+ALVD +P GL IL +K+GS+ M E+ + A +KWLG+ +++ I
Sbjct: 202 DALPRTIPIMALVDGDPYGLDILSVYKYGSLSMQHESGKLATKRIKWLGIWASELETLGI 261
Query: 286 PEQSLLPLKPRDLQIARSLM--SSEILQENYKEELSLMVHNGQRAEVEAL 333
+LLP+ D + A S++ + L E +K+EL M+H+ ++AE+E L
Sbjct: 262 DRDNLLPISKHDEKKALSMLLRPTSQLPEKWKKELVHMLHSRRKAEIEIL 311
>gi|145592124|ref|YP_001154126.1| DNA topoisomerase VI subunit A [Pyrobaculum arsenaticum DSM 13514]
gi|379003158|ref|YP_005258830.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
gi|145283892|gb|ABP51474.1| Spo11/DNA topoisomerase VI, subunit A [Pyrobaculum arsenaticum DSM
13514]
gi|375158611|gb|AFA38223.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
Length = 367
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 138/254 (54%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +G+ A +G + G ++++ E +D S G + S
Sbjct: 117 WDEQDESNAVIEDIEVATNVLREEMGVSADVKGKIVGPIVVRSQGYE-LDASKFGETALS 175
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++VVEK AIFQRL + ++Q +IL+TAKG PD ATR +
Sbjct: 176 LPVNVDALEIV--KVEAAYVLVVEKDAIFQRLVREKFWSQENAILVTAKGMPDRATRRFI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A K+LGL D+
Sbjct: 234 RRLNEEYK-LPVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPEAKFLGLTATDIDA 292
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYL 341
I + ++ RD++ A+ L+ Q++ + +E++L + ++ E+EAL HG +L
Sbjct: 293 YKISDNYVIAATDRDVKRAQELLRYPWFQKSEWTKEINLFLKKKKKVEIEALSTHGLKFL 352
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 353 HDYLRDKIRNKKFI 366
>gi|428167303|gb|EKX36265.1| meiosis-specific transesterase [Guillardia theta CCMP2712]
Length = 410
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 152/298 (51%), Gaps = 32/298 (10%)
Query: 70 VRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFS 129
R ++V + +L K T+R++FY + F Q+ ++ I+ + + + RF
Sbjct: 124 ARFFRVAQLVCSLLKANKTSTKRDIFYA----DGKVFGKQINSDKAIELLARICNVPRFQ 179
Query: 130 LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVE 189
L IV+ S+GLV G L++++ +I C SG +L +L A + VVE
Sbjct: 180 LNIVSYSKGLVYGALVMKDLQGNLIHCH---------SGPTTLPSEL-FVDQAHALFVVE 229
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
K IF+RL + +IL+T GYPD+ TR LL RL+++ P+LPI + DW+P G+
Sbjct: 230 KECIFRRLCDG------RAILLTGCGYPDVQTRILLSRLSKSHPNLPIYGIADWDPDGVE 283
Query: 250 ILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMS 306
I+ T+ FGS E C ++WLGL +D+++ +P+ L L RD +
Sbjct: 284 IILTYAFGSHSREHEREFLRCPTMRWLGLHSNDMKVFGVPKALRLELSSRDRARISRMCE 343
Query: 307 SEILQEN--YKEELSLMVHNGQRAEVE---ALYFHGYDYLGK----YIAKKIVQADYI 355
++++EN ++ EL M+ + E+E A+ G + L YI KI + DY+
Sbjct: 344 RKVIKENPRWRNELEEMLIQDSKYEIECLNAISQGGSNSLSNLSNHYIHDKICRFDYL 401
>gi|171185844|ref|YP_001794763.1| DNA topoisomerase VI subunit A [Pyrobaculum neutrophilum V24Sta]
gi|170935056|gb|ACB40317.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum neutrophilum
V24Sta]
Length = 367
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 139/254 (54%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +G+ A +G + G ++++ E +D S G + S
Sbjct: 117 WDEQAESNAVIEDIEVAANVLREEMGVSADVKGKIVGPIVVRSQGYE-LDASKFGETALS 175
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++VVEK AIFQRL + ++Q ++L+TAKG PD ATR +
Sbjct: 176 LPVNVDGLEIV--KVEASYVLVVEKDAIFQRLVREKFWSQESAVLVTAKGMPDRATRRFI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A + K+LGL D+
Sbjct: 234 RRLNEEYK-LPVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDA 292
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYL 341
I + ++ RD++ A+ L+ Q++ + +E++L + ++ E+EAL HG +L
Sbjct: 293 YKISDNYVIAANDRDIKRAQELLRYPWFQKSEWTKEINLFLKKKKKVEIEALSTHGLKFL 352
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 353 HDYLRDKIRGRKFI 366
>gi|307211946|gb|EFN87858.1| Meiotic recombination protein SPO11 [Harpegnathos saltator]
Length = 409
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 155/291 (53%), Gaps = 13/291 (4%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT-SQLQVNRTIQDVIALLHCSR 127
FV + +M ++L T+R +Y L E +Q V+R + DV LL C+
Sbjct: 128 FVLMTMLMAEVHRLLLTNATRTRRSFYYDLKSQMTESLAPNQRYVDRALNDVANLLECAP 187
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY-SISGDLSLLEKLDLKTDARYII 186
+ L ++A+++GL AG + + + VIDC+ G + I+ +++ ++ A++++
Sbjct: 188 WDLRLLATAKGLAAGNMSITLTDGHVIDCTIPGGALIPQIASNVA-----SIRAKAKFVL 242
Query: 187 VVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
VVEK A FQ+L E+ + IL+T KGYPD ATR LL L+ DLP+ + D +P
Sbjct: 243 VVEKDATFQKLLEENCPRALNCILLTGKGYPDTATRMLLKLLSDKM-DLPVYIVADADPF 301
Query: 247 GLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLM 305
G+ I+ ++FGS+ + E C N +WLG+ ++ + ++ +PL DL RS+
Sbjct: 302 GVDIVLIYRFGSMALCRENENLTCPNARWLGIFPTELIALGAKT-VPLSEADLAKLRSIE 360
Query: 306 SSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQADYI 355
+ + E ++LS++ +AE+EA+ ++L Y+ KI DYI
Sbjct: 361 ARAYVNEAISKQLSVLRKG--KAEIEAVSTLSTNFLTATYLPYKIDGLDYI 409
>gi|374325958|ref|YP_005084158.1| DNA topoisomerase [Pyrobaculum sp. 1860]
gi|356641227|gb|AET31906.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum sp. 1860]
Length = 367
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 137/254 (53%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +G+ A +G + G ++++ E +D S G + S
Sbjct: 117 WDEQAESNAVIEDIEVAANVLREEMGVSADVKGKIVGPIVVRSQGYE-LDASKFGETALS 175
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++VVEK AIFQRL + ++Q +IL+TAKG PD ATR +
Sbjct: 176 LPVNVDALEIV--KVEATYVLVVEKDAIFQRLVREKFWSQENAILVTAKGMPDRATRRFI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A + K+LGL D+
Sbjct: 234 RRLNEEYK-LPVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDA 292
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYL 341
I + ++ RD++ A+ L+ Q+ + E++L + ++ E+EAL HG +L
Sbjct: 293 YKISDNYVIAANDRDIKRAQELLRYPWFQKPEWTREVNLFLRKKKKVEIEALSTHGLKFL 352
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 353 HDYLRDKIRGRKFI 366
>gi|71416166|ref|XP_810124.1| meiotic recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70874610|gb|EAN88273.1| meiotic recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 437
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 154/336 (45%), Gaps = 79/336 (23%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L P+ Q +NR IQ ++ + R LG+V +RG V G +
Sbjct: 111 TQRDVYYRLARLIPD----QGCINRAIQQLVQTIGIPRQWLGVVPGTRGCVGGSISFHG- 165
Query: 150 NQEVIDCSACGSSGYS----------ISGDLSLLEK----------LDLKTDARYIIVVE 189
+D GS G + GD+ ++ RYI+VVE
Sbjct: 166 ----VDLRCYGSEGLPLPTTQEELRVVQGDVDRTAASNKDNVPFIGFEIHGKTRYIVVVE 221
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
KHA+F RL E+ +F ++P +L+T+ G+P +A R LL L+RA +P++ALVD+NP+GL+
Sbjct: 222 KHAVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSVPLVALVDYNPSGLS 281
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLR-------------GDDVQLIPEQ---SLLPL 293
IL +K+G+ GM Y + WLGLR G D ++ E LLP
Sbjct: 282 ILQQYKYGAGGMRESQYVAVHALHWLGLRTHHIAEGREPNFVGSDNRVASEPFPLRLLPR 341
Query: 294 KP------RDLQIARSLMS------------SEILQENYKEELSLMVHNGQRAEVEALYF 335
P RD+ + +L+S + + EE M H + E+E LY
Sbjct: 342 LPFQRFSQRDVVMMANLLSRWHGIREGCEWKDNDADKAWYEEALKMQHLRVKVELEVLYQ 401
Query: 336 HGYDYLGK----------------YIAKKIVQADYI 355
HG D L + ++ + I++ DYI
Sbjct: 402 HGTDELKQPASSSLELSDGNGFAAWVCRAILRHDYI 437
>gi|452824698|gb|EME31699.1| DNA topoisomerase [Galdieria sulphuraria]
Length = 364
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 153/311 (49%), Gaps = 43/311 (13%)
Query: 71 RVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY----------------FTSQLQVNR 114
RV+ +M+ +L Q QR LFY++ EY F SQ+QV+
Sbjct: 42 RVFILMDKIHALLVQGSYANQRALFYEMRHLKMEYSVTNKSYSLTKHSSYLFPSQIQVDT 101
Query: 115 TIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQ--EVIDCSACGSSGYSISGDLSL 172
TI+ + LL SR L I +S+G ++G + L N IDC G+ I G
Sbjct: 102 TIRKISGLLGSSRNELHIFPNSKGFLSGAIALVHHNSSSNAIDCLREFPDGWCIPGSTEY 161
Query: 173 LEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
L + + A+YI+V+EKH IF+RL ED + +PSILI GYP IAT+FL R+ R
Sbjct: 162 LNQFKFENLGAQYIVVIEKHGIFKRLLEDRFVHHLPSILICGLGYPSIATKFLFQRIARE 221
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIG---------MGMEAYRYAC--NVKWLGLRGD 280
LP L LVD+NP GLA+L T++ S+ + ++R + ++ WLGL
Sbjct: 222 L-RLPCLGLVDYNPHGLALLQTYR-SSLAKEASDLDNQLSCSSWRESTPLHIYWLGLHFS 279
Query: 281 DVQLIP--EQSLLPLKPRDLQIARSLMSSEILQENYKEELSLM------VHNGQRAEVEA 332
+ + ++ PL RD + L + LQ L+++ + NG + E++A
Sbjct: 280 QLSQLNLWDKFRKPLTRRDRVLLTKLRNQ--LQTKAGRNLAVLEQELNAMQNG-KVELQA 336
Query: 333 LYFHGYDYLGK 343
+Y G+ YL +
Sbjct: 337 IYSLGHSYLSR 347
>gi|407832805|gb|EKF98601.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi]
Length = 437
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 154/336 (45%), Gaps = 79/336 (23%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L P+ Q +NR IQ ++ ++ R LG+V +RG V G +
Sbjct: 111 TQRDVYYRLARLVPD----QGCINRAIQQLVQIIGIPRQWLGVVPGTRGCVGGSISFHG- 165
Query: 150 NQEVIDCSACGSSGYS----------ISGDLSLLEK----------LDLKTDARYIIVVE 189
+D GS G + GD+ ++ RYIIVVE
Sbjct: 166 ----VDLRCYGSEGLPLPTTQEELRVVQGDVDRTAASNKDNVPFIGFEIHGKTRYIIVVE 221
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
KHA+F RL E+ +F ++P +L+T+ G+P +A R LL L+RA +P++ALVD+NP+GL+
Sbjct: 222 KHAVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSVPLVALVDYNPSGLS 281
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLR------GDDVQLIPEQS----------LLPL 293
IL +K+G+ GM + + WLGLR G D + + LLP
Sbjct: 282 ILQQYKYGAGGMRESQFVAVHALHWLGLRTHHIAEGRDPNFVDSDNRVASEPFPLRLLPR 341
Query: 294 KP------RDLQIARSLMS------------SEILQENYKEELSLMVHNGQRAEVEALYF 335
P RD+ + +L+S + + EE M H + E+E LY
Sbjct: 342 LPFQRFSQRDVVMMANLLSRWHGIREGCEWKDNDADKAWYEEALKMQHLRVKVELEVLYQ 401
Query: 336 HGYDYLGK----------------YIAKKIVQADYI 355
HG D L + ++ + I++ DYI
Sbjct: 402 HGTDELKQPASSSLELSDGNGFAAWVCRAILRHDYI 437
>gi|449690981|ref|XP_002162299.2| PREDICTED: meiotic recombination protein SPO11-like [Hydra
magnipapillata]
Length = 348
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 144/263 (54%), Gaps = 20/263 (7%)
Query: 79 CFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG 138
C++++ K T+R+++Y + F Q V+ + ++ +L R SL +++S++G
Sbjct: 75 CYKLILMGKHSTKRDIYYS----NVNLFVCQGYVDDCLANISCMLGVPRNSLNVLSSAKG 130
Query: 139 LVAGRLMLQEPNQEVIDCSACGSSGYSISGDL--SLLEKLDLKTDARYIIVVEKHAIFQR 196
L+ G L N ++C Y + + ++ ARYI+V+EK AIFQR
Sbjct: 131 LIYGCLKYTNQNNLTVNC-------YDQVTQIPSEIESIQIIQITARYILVIEKEAIFQR 183
Query: 197 LTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
+ E ++ S++IT KG+PD+ TR LL+++ + +P+ ALVD +P G+ I+ +K
Sbjct: 184 IAEHGFQEKLGHSLIITGKGFPDVNTRMLLNKICKHV-SIPVFALVDADPHGIEIMFVYK 242
Query: 256 FGSIGMGMEAYRYAC-NVKWLGLRGDDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQE 312
FGS M EA C ++KWLG+ D+ IP + L+PL D + LM+ + +
Sbjct: 243 FGSKSMSYEAEHLTCPSMKWLGILPKDIIGMRIPNRVLIPLSQNDNKKLLDLMNRPYVLQ 302
Query: 313 N--YKEELSLMVHNGQRAEVEAL 333
N YKE+++ + +G +AE+E L
Sbjct: 303 NKDYKEQINFLHESGLKAEIECL 325
>gi|71403068|ref|XP_804374.1| meiotic recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70867310|gb|EAN82523.1| meiotic recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 437
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 63/318 (19%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L P+ Q +NR IQ ++ ++ R LG+V +RG V G +
Sbjct: 111 TQRDVYYRLARLVPD----QGCINRVIQQLVQIIGIPRQWLGVVPGTRGCVGGSISFHG- 165
Query: 150 NQEVIDCSACGSSGYS----------ISGDLSLLEK----------LDLKTDARYIIVVE 189
+D GS G + GD+ ++ RYI+VVE
Sbjct: 166 ----VDLRCYGSEGLPLPTTQEELRVVQGDVDRTAASNKDNVPFIGFEIHGKTRYIVVVE 221
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
KHA+F RL E+ +F ++P +L+T+ G+P +A R LL L+RA P++ALVD+NP+GL+
Sbjct: 222 KHAVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSAPLVALVDYNPSGLS 281
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV----------------------QLIPE 287
IL +K+G+ GM Y + WLGLR + +L+P
Sbjct: 282 ILQQYKYGAGGMRESQYAAVHALHWLGLRTHHIAEGREPNFLDSDNSVASEPFQLRLLPR 341
Query: 288 QSLLPLKPRDLQIARSLMSS-EILQEN-----------YKEELSLMVHNGQRAEVEALYF 335
RD+ + +L+S ++E + EE M H + E+E LY
Sbjct: 342 LPFQRFSQRDVVMMANLLSRWHGIREGCEWKDNDADNAWYEEALKMQHLRVKVELEVLYQ 401
Query: 336 HGYDYLGKYIAKKIVQAD 353
HG D L + + + +D
Sbjct: 402 HGTDELKQSASSSLEPSD 419
>gi|219120278|ref|XP_002180881.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407597|gb|EEC47533.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 432
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 153/308 (49%), Gaps = 31/308 (10%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
+ ++F + V++ C +L + T RE++Y + ++ SQ + + IQD LL
Sbjct: 108 HQCRSFTSILLVLDFCHSLLRARRTTTTREVYYYHVT----HYRSQKECDSAIQDTAILL 163
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGS-SGYSISGD-LSLLEKLDLKT- 180
R SLG+ AS +G G + L Q V+D S G ISG+ L+ + +
Sbjct: 164 QVPRSSLGLKASPKGWFCGDVQLVSNGQVVLDGRHLQSIHGAPISGEWLAPTRDFTIHSC 223
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
A I+V+EK ++ RL ED F++ P IL+T KG+PD++TR L+H L+ LP+ L
Sbjct: 224 AATCILVIEKEGVYNRLVEDRFFDRFPCILVTGKGFPDLSTRALVHVLHHTLGLLPVRGL 283
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL-------------IPE 287
D NP G+ +L T++ + +R+ + W+GLR VQ +P+
Sbjct: 284 CDCNPYGVMVLHTYQHTARKGVDGGHRFGVPISWIGLRPSQVQQLQRQPNTKHGQSKLPD 343
Query: 288 ---QSLLPLKPRDLQIARSLMSSEI------LQENYKEELSLMVHNGQRAEVEALYFHGY 338
QSL L R L+ L+S + E EEL M+ NG + E+EAL + G
Sbjct: 344 QVFQSLTALDKRRLE--HHLLSEQHGWTTFGPDERRVEELEEMLKNGYKMELEALNWLGM 401
Query: 339 DYLGKYIA 346
D++ K++
Sbjct: 402 DFITKWLG 409
>gi|126459556|ref|YP_001055834.1| DNA topoisomerase VI subunit A [Pyrobaculum calidifontis JCM 11548]
gi|126249277|gb|ABO08368.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Pyrobaculum
calidifontis JCM 11548]
Length = 367
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 136/254 (53%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ + R +G+ A +G + G ++++ E +D S G + S
Sbjct: 117 WDEQDESNAVIEDIEVATNVLREEMGVSADVKGKIVGPIIVRSQGYE-LDASKFGETALS 175
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ ++ LE + K +A Y++VVEK AIFQRL + ++Q IL+TAKG PD ATR +
Sbjct: 176 LPVNVDALEIV--KVEAAYVLVVEKDAIFQRLVREKFWSQENCILVTAKGMPDRATRRFI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A K+LGL D+
Sbjct: 234 RRLNEEYK-LPVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPEAKFLGLTATDIDA 292
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYL 341
I + ++ RD++ A+ L+ Q+ + +E++L + ++ E+EAL HG +L
Sbjct: 293 YKISDNYVIAANDRDVKRAQELLRYPWFQKPEWTKEINLFLKKKKKVEIEALSTHGLKFL 352
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 353 HDYLRDKIRGGKFI 366
>gi|395332754|gb|EJF65132.1| topoisomerase acting in meiosis [Dichomitus squalens LYAD-421 SS1]
Length = 342
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 156/283 (55%), Gaps = 16/283 (5%)
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
++K+ +A+ F ++++V++ + L VT+R+++YK + + F SQ V+R + D+
Sbjct: 9 VSKTPSARPFAQLFRVIDLIHEALVDGVPVTKRDIYYKDV----QLFRSQATVDRLVDDL 64
Query: 120 IALLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
A L +R L + ASS+GL+ G + + + E ++ +S S D+ ++ +
Sbjct: 65 AATLQLTRADLDVRASSKGLMCGSGVTMHMQSGETLELCDGDASLIPPSEDI---KRFAV 121
Query: 179 KTDARYIIVVEKHAIFQRLTED--FVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFP- 233
+++VVEK A+FQ L +P +++T KGYPD+ATR L+ L P
Sbjct: 122 AQTLAWVLVVEKEAVFQTLCRLRLATHETLPGSGLIVTGKGYPDVATRQLVKTLADNLPA 181
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQL--IPEQSL 290
+PILALVD + G+ IL +K GS M E A + V+WLGL ++ I + +L
Sbjct: 182 RVPILALVDGDAYGIDILSVYKHGSTRMRHENSHLAADRVQWLGLWASELASLGIDKDAL 241
Query: 291 LPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
LP+ D + ARSL+ E L +++EL M+ + ++AE+E L
Sbjct: 242 LPITKHDEKKARSLLKRENLPARWRKELQYMLFSRRKAEIEVL 284
>gi|336384581|gb|EGO25729.1| hypothetical protein SERLADRAFT_437454 [Serpula lacrymans var.
lacrymans S7.9]
Length = 498
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 40/323 (12%)
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+K +AK +++V++ + L + VT+R+++YK + F SQ V+R + DV
Sbjct: 178 SKGASAKPLAHIFRVLDFMHEALLYDIPVTKRDMYYKDVS----LFKSQATVDRLVDDVA 233
Query: 121 ALLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
A +R L + AS++GL+ G L++ E I + + + D+ ++ +++
Sbjct: 234 ATFELNRSDLHVRASTKGLICGSGLLIHLTGGETIHINESEGALIPVGEDI---DRFEIE 290
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPS-----ILITAKGYPDIATRFLLHRLNRAFPD 234
D ++++VEK A+FQ L F PS I+IT KGYPD+ATR L+ + P
Sbjct: 291 GDMAWVLIVEKDAVFQTLCR-LQFASHPSLPGPGIIITGKGYPDVATRQLVKTFSDNLPS 349
Query: 235 -LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGL------RGDDVQL-- 284
+PILALVD + G+ IL +K+GS + E + A V+WLG+ D L
Sbjct: 350 HIPILALVDGDAYGIDILSVYKYGSWSLRHENGKLAAERVEWLGIWTSELAEYDHTNLLL 409
Query: 285 -IPEQSLLPLKPRDLQIARSLMS--SEILQENYKEELSLMVHNGQRAEVEALYFH----- 336
I S++P+ D + A ++ E + +++EL M+H ++AE+E L H
Sbjct: 410 GIDIDSMIPITKHDEKKAILMLQRPPETMPAPWRKELMRMLHTRRKAEIEILSAHYSNNV 469
Query: 337 --------GYDYLGKYIAKKIVQ 351
GY +L Y++ KI+
Sbjct: 470 KHTSTNIPGYPFLLHYLSGKIID 492
>gi|302681745|ref|XP_003030554.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
gi|300104245|gb|EFI95651.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
Length = 277
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 149/275 (54%), Gaps = 11/275 (4%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S +A+ F ++++VM+ + + + T+R+++YK D P F +Q V+ + D+ A
Sbjct: 7 SGSARPFAQLFRVMDIAHEAVIDDISSTKRDMYYK---DVP-LFGTQRVVDNLVDDLAAT 62
Query: 123 LHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
R L + A+S+GLV G L + + EV+ + + + D+ + L
Sbjct: 63 FEVERSDLNVRATSKGLVCGSSLSIHLRSGEVLQPNDSDGTLIPVGEDI---QSFSLVRA 119
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
++++VEK A+FQ L + P IL KGYPD+ATR L+ L+ D+PILALV
Sbjct: 120 ISWVLIVEKDAVFQTLYLRSPRSSSPLILSQGKGYPDLATRHLVKTLSDCLQDVPILALV 179
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRY-ACNVKWLGLRGDDVQL--IPEQSLLPLKPRDL 298
D + GL IL +K+GS + E + A ++W+G++G ++ + LLP +D
Sbjct: 180 DADAYGLDILSVYKYGSRSLRHEVGKLAAARMEWMGVKGSELNELGVHADHLLPFTKQDE 239
Query: 299 QIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
++A +++ L + +++ELS M+ ++AE+E L
Sbjct: 240 KMALTMLRRPDLPQEWRKELSRMLFTRRKAEIEVL 274
>gi|119719577|ref|YP_920072.1| DNA topoisomerase VI subunit A [Thermofilum pendens Hrk 5]
gi|119524697|gb|ABL78069.1| Spo11/DNA topoisomerase [Thermofilum pendens Hrk 5]
Length = 379
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 138/260 (53%), Gaps = 11/260 (4%)
Query: 102 SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGS 161
S E + Q + N IQD+ R +G+ ++G + G ++++ E ID S GS
Sbjct: 124 SEETWDDQRESNAVIQDIEVATGLLREHMGVTHDAKGRIVGNMIIRSKGDE-IDLSKMGS 182
Query: 162 SGYSISGDLSLLEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
+ I S ++K++ L+ +A Y++VVEK A+F++L E+ + + IL+T KG PD +
Sbjct: 183 GAWGIP---SFVDKIEILRVEADYVLVVEKGAVFEKLNEEEFWKKNNCILVTGKGQPDRS 239
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRG 279
TR ++ RL F LP+ L D + G I ++ GSI + E+ R A ++LG+
Sbjct: 240 TRRMVRRLWEEF-GLPVYILTDGDSYGFYIYSVYRSGSISLSYESERLATPEARFLGVSP 298
Query: 280 DDVQLIPEQSL-LPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFH 336
D++ Q + RDL+ A+ LM+ +E+ + EEL L + ++ E+EA H
Sbjct: 299 SDIERYELQGFTIKATERDLKRAKELMNYPWFKESKRWMEELELFLEKKEKVEIEAFAKH 358
Query: 337 GYDYL-GKYIAKKIVQADYI 355
G YL +YI KKI +I
Sbjct: 359 GLKYLSSEYIPKKIKNKQWI 378
>gi|384252434|gb|EIE25910.1| DNA topoisomerase IV, alpha subunit [Coccomyxa subellipsoidea
C-169]
Length = 252
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 40/262 (15%)
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML-QEPNQEVIDCSACGSS 162
+ F + QVN+ IQDV +++ LG +SRG V G L++ +E E +DCS
Sbjct: 13 DIFKTPEQVNQAIQDVASMVQVPSMLLGFSCASRGAVYGPLLVREEAAGEWMDCS----- 67
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
+++VVEK AIFQRL +D I IL+TAKG PD+ATR
Sbjct: 68 --------------------MFVVVVEKDAIFQRLVDDGFAEHIGGILVTAKGMPDMATR 107
Query: 223 FLLHRLNRAFPDLPILA----------LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNV 272
LH L +A P L +A +VDWNPAG+ I C +K+GS Y + +
Sbjct: 108 AFLHALTQALPHLTPIAGKSLHNGTTLMVDWNPAGVNIYCVYKYGSTRRHSAQYGLS-GL 166
Query: 273 KWLGLRGDDVQLIPEQSLL-PLKPRDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEV 330
WL R + +P L PL RD + SL + + E EL M+ +AE+
Sbjct: 167 TWLAARAALLHGVPNHVLQGPLTTRDKALTVSLKAGPLSAEPAVLAELDAMLEMDAKAEI 226
Query: 331 EALYFH-GYDYLGKYIAKKIVQ 351
EALY G D +A+ ++Q
Sbjct: 227 EALYEKVGIDNFTASLAQSLLQ 248
>gi|159042113|ref|YP_001541365.1| DNA topoisomerase VI subunit A [Caldivirga maquilingensis IC-167]
gi|157920948|gb|ABW02375.1| DNA topoisomerase (ATP-hydrolyzing) [Caldivirga maquilingensis
IC-167]
Length = 369
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 166/342 (48%), Gaps = 28/342 (8%)
Query: 37 RVSQGLLTDVSW------IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVT 90
R+ LT++ W + L R N AK F++ +++ Q + + T
Sbjct: 32 RIPARTLTNIIWDEKRKILVLGPKAIERRFLDLNEAKRFMQTTLMLKLIIQSIKENVYPT 91
Query: 91 QRELFYK----LLCDSPEY--------FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG 138
R+L+Y + + P+ + Q + N I+D+ R +G+ A +G
Sbjct: 92 IRDLYYNGKHTMELNEPKLSKSFRENTWDEQSESNAVIEDIEVATGVLREEMGVSADVKG 151
Query: 139 LVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL-KTDARYIIVVEKHAIFQRL 197
V G ++++ E ID + G + S+ + ++LD+ + DA+Y++VVEK AIFQRL
Sbjct: 152 KVVGPIVVRSKGFE-IDATKMGDTALSLPPNP---DELDIVRMDAKYVLVVEKDAIFQRL 207
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
+ +N +L+TAKG PD ATR + RL+ + LP+ D +P G I ++ G
Sbjct: 208 NREGYWNSEKCLLVTAKGMPDRATRRFVRRLSEDY-GLPVYVFTDGDPYGWYIYSVYRSG 266
Query: 258 SIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN- 313
SI + E R A + K++G+ D+ I + ++ RD++ A+ L Q +
Sbjct: 267 SIKLSYENERLATPDAKFIGVTASDISKYKISDNYVIKATDRDIKRAQELKKYPWFQSHE 326
Query: 314 YKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+K EL L + ++ E+EAL HG +L +Y+ KI +I
Sbjct: 327 WKRELDLFLRTRKKVEIEALSTHGLKFLHEYLLDKIHNNKWI 368
>gi|325967951|ref|YP_004244143.1| DNA topoisomerase [Vulcanisaeta moutnovskia 768-28]
gi|323707154|gb|ADY00641.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta moutnovskia
768-28]
Length = 369
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 137/254 (53%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ R +G+ A +G V G ++++ E ID + G + S
Sbjct: 119 WDEQSESNAVIEDIEVATGMLREEMGLSADVKGKVVGPIIVRSKGFE-IDATKLGDTALS 177
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ + L+ + K +A Y++V+EK AIFQRL + +N+ +LITAKG PD ATR +
Sbjct: 178 LPPNPDDLDIV--KVEANYVLVIEKDAIFQRLNREGFWNKESCLLITAKGMPDRATRRFV 235
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LPI L D +P G I +K GSI + E+ R A K++G+ D++
Sbjct: 236 RRLNEEY-GLPIYILTDGDPYGWYIYSVYKSGSIKLSYESDRLATPEAKFVGVTATDIRT 294
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
I ++ ++ RDL+ A+ L+ Q +++K+E+ L + ++ E+EAL HG +L
Sbjct: 295 YKISDEYVIKATDRDLKRAQELIRYPWFQSDHWKKEIELFLRTKKKVEIEALSTHGLRFL 354
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 355 HDYLTDKIHGGKFI 368
>gi|307596127|ref|YP_003902444.1| DNA topoisomerase [Vulcanisaeta distributa DSM 14429]
gi|307551328|gb|ADN51393.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta distributa DSM
14429]
Length = 369
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 137/254 (53%), Gaps = 8/254 (3%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
+ Q + N I+D+ R +G+ A +G V G ++++ E ID + G + S
Sbjct: 119 WDEQSESNAVIEDIEVATGILREEMGLSADVKGKVVGPIIVRSKGFE-IDATKLGDTALS 177
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ + L+ + K +A Y++V+EK AIFQRL + +N+ +LITAKG PD ATR +
Sbjct: 178 LPPNPDDLDIV--KVEANYVLVIEKDAIFQRLNREGFWNKESCLLITAKGMPDRATRRFV 235
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RLN + LP+ L D +P G I +K GSI + E+ R A K++G+ D++
Sbjct: 236 RRLNEEY-GLPVYVLTDGDPYGWYIYSVYKSGSIKLSYESDRLATPEAKFVGVTATDIRT 294
Query: 285 --IPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
I ++ ++ RDL+ A+ L+ Q +++K+E+ L + ++ E+EAL HG +L
Sbjct: 295 YKISDEYVIKATDRDLKRAQELLRYPWFQSDHWKKEIELFLRTKKKVEIEALSTHGLRFL 354
Query: 342 GKYIAKKIVQADYI 355
Y+ KI +I
Sbjct: 355 HDYLIDKIHGNKFI 368
>gi|145967210|gb|ABP98997.1| meiotic transesterase, partial [Trypanosoma cruzi]
Length = 314
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 29/209 (13%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L P+ Q +NR IQ ++ ++ R LG+V +RG V G +
Sbjct: 76 TQRDVYYRLARLVPD----QGCINRVIQQLVQIIGIPRQWLGVVPGTRGCVGGSISFHG- 130
Query: 150 NQEVIDCSACGSSGYS----------ISGDLSLLEK----------LDLKTDARYIIVVE 189
+D GS G + GD+ ++ RYI+VVE
Sbjct: 131 ----VDLRCYGSEGLPLPTTQEELRVVQGDVDRTAASNKDNVPFIGFEIHGKTRYIVVVE 186
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
KHA+F RL E+ +F ++P +L+T+ G+P +A R LL L+RA +P++ALVD+NP+GL+
Sbjct: 187 KHAVFFRLMEERIFERLPCVLLTSHGFPTVAARTLLSNLHRAAQSVPLVALVDYNPSGLS 246
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLR 278
IL +K+G+ GM Y + WLGLR
Sbjct: 247 ILQQYKYGAGGMRESQYVAVHALHWLGLR 275
>gi|449546513|gb|EMD37482.1| hypothetical protein CERSUDRAFT_49779 [Ceriporiopsis subvermispora
B]
Length = 349
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 147/279 (52%), Gaps = 17/279 (6%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
+AK ++ KV++ + L + T+R+++YK + F SQ V+R + D+ A
Sbjct: 20 SAKPLAQLLKVIDLMHEALVDDVPTTKRDMYYKDVS----LFKSQSVVDRLVDDIAATFE 75
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQ-EVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
R L + AS +GL++G + N+ EV+ +A + IS D+S E D
Sbjct: 76 MGRSDLHVRASCKGLISGVGLTMHLNEGEVLHVNATEPTLIPISEDISHFEVDD---SLA 132
Query: 184 YIIVVEKHAIFQRLTEDFVFNQI----PSILITAKGYPDIATRFLLHRLNRAF-PDLPIL 238
+++VVEK A+FQ L + P +LIT KGYPD+ATR L+ L+ P +PIL
Sbjct: 133 WVLVVEKEAVFQTLCRLNITAHPLLPGPGLLITGKGYPDVATRQLVKTLSDNLPPSIPIL 192
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQ--LIPEQSLLPLKP 295
LVD + G+ IL +K GS M E + A V+WLGL ++ I +L+P+
Sbjct: 193 CLVDGDAYGIDILSVYKRGSTSMLHERDKLAAGRVRWLGLWTSELAGLGIDRDALIPMTK 252
Query: 296 RD-LQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
D + A +++ L +++EL M+HN ++AE+E L
Sbjct: 253 HDEKKKAMTMLRRPDLPRKWRKELQYMLHNRRKAEIEIL 291
>gi|395752486|ref|XP_002830510.2| PREDICTED: meiotic recombination protein SPO11 [Pongo abelii]
Length = 384
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 160/314 (50%), Gaps = 34/314 (10%)
Query: 54 SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
S CT KS++ K+ F + K++ ++++ T+R+++Y DS + F +Q
Sbjct: 93 SHCTTRKIKSDSPKSAQKFALILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
V+ I D+ +L SR SL I+++S+GL+AG L E + ++C+ CG++ ++ ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILIT---AKGYPDIATRFLLHR 227
+ +L TDA+++++VEK A F RL D + P I+IT P R
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFPRLLYDTLHKLSPCIMITLSVPATCPVAINADTAMR 265
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL-- 284
R + I+C +K+GS+ M EA+ ++WLGL D++
Sbjct: 266 STR---------------QSIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLN 310
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLG 342
+P+ SL+PL RD S++ + Q +++E+ +M + +AE++AL F DYL
Sbjct: 311 VPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLS 370
Query: 343 K-YIAKKIVQADYI 355
+ Y+ K+ +I
Sbjct: 371 RVYLPNKLKFGGWI 384
>gi|229582220|ref|YP_002840619.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.N.15.51]
gi|228012936|gb|ACP48697.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.N.15.51]
Length = 389
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 37/373 (9%)
Query: 10 INFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAF 69
+N ++ L +P + ++P+ R SN+ + + R+ N AK F
Sbjct: 26 LNLVEQLKKGEPLVMEIPM--RTLSNAIYDEKRKLLLL----GEKKLKRNFLDLNEAKRF 79
Query: 70 VRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE---------YFTSQLQVNRTI 116
++ + + L ++ T R+L+Y+ LL S E + Q + + I
Sbjct: 80 MQTVLMASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVI 139
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL 176
D+ R + I++ +G V G L ++ N +VID S G Y+I L++ +
Sbjct: 140 VDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DVIDLSKTGHGAYAIEPTPDLIDFI 198
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
D+ DA +++VVEK A+FQ+L + Q SILIT+ G PD ATR + RLN LP
Sbjct: 199 DV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELK-LP 255
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV-----------QL 284
+ L D +P G I F+ GSI + E+ R A + K+LG+ D+ +
Sbjct: 256 VYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEA 315
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYLG- 342
+ ++ K D++ A + + E + + ++EE++ + + E+EA+ G +LG
Sbjct: 316 ERKNYIIKAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLGF 375
Query: 343 KYIAKKIVQADYI 355
+YI +KI DYI
Sbjct: 376 QYIPEKITNKDYI 388
>gi|19114391|ref|NP_593479.1| endonuclease Rec12 [Schizosaccharomyces pombe 972h-]
gi|3123261|sp|P40384.2|REC12_SCHPO RecName: Full=Meiotic recombination protein rec12
gi|6224926|gb|AAF06017.1|AF195027_1 meiotic recombination protein Rec12 [Schizosaccharomyces pombe]
gi|2370483|emb|CAB11511.1| endonuclease Rec12 [Schizosaccharomyces pombe]
Length = 345
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 171/336 (50%), Gaps = 26/336 (7%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
VR+ IE V +F++ L+ P ++ L RK ++ S + SF
Sbjct: 10 VRSWIEQFVHDFVEQLSKPTKDSVNVALKRRKHNSWNGSLDSKANERQKVKVFSFPRNET 69
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
T ++++V++ + + + +T+R+++Y+ + + F Q V+ + D+
Sbjct: 70 T-------IAQLFRVLDCVHEAVISDTVITKRDIYYRDV----DLFKRQTVVDELLGDIS 118
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA-CGSSGYSISGDLSLLEKLDLK 179
+ CSR L + AS++GLV G + + N VI + S + IS +
Sbjct: 119 NTIGCSRSDLNVEASAKGLVFGSIHIALENGTVITATKPLLISHHRISS---------IT 169
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+ A++++V+EK A+FQ LTE+ + + +I++TAKG+PD+ TR L +L +A PD
Sbjct: 170 STAKWVLVIEKEAVFQTLTEEALAD---TIIVTAKGFPDLMTRKFLVKLAKALPDAKFFG 226
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
+ DW+P GL I FK+GS E + N++ LG +D+ ++ L L RD++
Sbjct: 227 IFDWDPHGLCIYSCFKYGSNAYSHEPHSQLRNLQLLGPLYEDIFNKNQEFSLKLNKRDIK 286
Query: 300 IARSLMSSEILQEN--YKEELSLMVHNGQRAEVEAL 333
+ +L+ E Q+ +E+L M+ ++AE++A+
Sbjct: 287 MITTLLQFEGFQKEPVVREQLQRMLFIQKKAEIQAI 322
>gi|15897848|ref|NP_342453.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus P2]
gi|284175657|ref|ZP_06389626.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus 98/2]
gi|384434402|ref|YP_005643760.1| DNA topoisomerase [Sulfolobus solfataricus 98/2]
gi|13814151|gb|AAK41243.1| DNA topoisomerase VI subunit A (top6A) [Sulfolobus solfataricus P2]
gi|261602556|gb|ACX92159.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus solfataricus 98/2]
Length = 389
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 157/325 (48%), Gaps = 31/325 (9%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDS---------PE 104
R+ N AK F++ + + L ++ T R+L+Y+ LL S
Sbjct: 68 RNFLDMNEAKRFMQTVLMASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIDGNKIVSEEN 127
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
+ Q + + I D+ R + I++ +G V G L ++ N + ID S G Y
Sbjct: 128 TWDEQKESDSVIVDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DTIDLSKTGHGAY 186
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
+I L++ +D+ DA +++VVEK A+FQ+L + Q SILIT+ G PD ATR
Sbjct: 187 AIEPTPDLIDFIDV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRF 244
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV- 282
+ RLN LP+ L D +P G I F+ GSI + E+ R A + K+LG+ D+
Sbjct: 245 VRRLNEELK-LPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMSDIF 303
Query: 283 ----------QLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVE 331
+ + ++ K D++ A + + E + + ++EE++ +H + E+E
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKEADIKRAEEIKNYEWFKTKAWEEEINTFLHRKAKLEIE 363
Query: 332 ALYFHGYDYLG-KYIAKKIVQADYI 355
A+ G +L +YI +KI DYI
Sbjct: 364 AMASKGLKFLAFQYIPEKITNKDYI 388
>gi|70607073|ref|YP_255943.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449067312|ref|YP_007434394.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449069582|ref|YP_007436663.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
gi|68567721|gb|AAY80650.1| DNA topoisomerase VI, subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449035820|gb|AGE71246.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449038090|gb|AGE73515.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
Length = 386
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 182/375 (48%), Gaps = 39/375 (10%)
Query: 8 SVINFLKILNSPDPAISDLPLINRKSSNSRVSQ--GLLTDVSWIFLSHSFCTRSLTKSNA 65
+ + ++++N+ +P I ++P R SN+ + GLL L R+ N
Sbjct: 23 TFLKLVEMVNNNEPPIMEIP--KRTLSNTVYDEKRGLL------ILGKEKLKRNFLDLNE 74
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE-------YFTSQLQVNR 114
AK F++ + + L ++ T R+L+Y+ ++ P + Q + +
Sbjct: 75 AKRFMQTTLMASIIYDALVNDEYPTIRDLYYRGKHSIILKDPNGRAYEENTWDEQKESDS 134
Query: 115 TIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE 174
I D+ R + I++ +G V G + ++ N +VID S G YSI L++
Sbjct: 135 VIVDIEVFTSLLREDMLILSKEKGKVVGDMRIRSGN-DVIDLSKMGHGAYSIEPTPDLID 193
Query: 175 KLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD 234
+D+ +A +++VVEK A+FQ+L + Q +IL+T+ G PD ATR + RLN
Sbjct: 194 FMDI--NAEFVLVVEKDAVFQQLHRAGFWKQYKAILVTSAGQPDRATRRFVRRLNEELK- 250
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV-------QLIP 286
LP+ L D +P G I FK GSI + E+ R A N ++LG+ D+ +
Sbjct: 251 LPVYILTDADPYGWYIYSVFKIGSISLSYESERLATPNARFLGVSMTDIFGDKGKKPYLS 310
Query: 287 EQS----LLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
+Q ++ K D++ A + + E + + ++ E+S+ + + E+EA+ G +L
Sbjct: 311 DQERRNYIIKAKDADVKRAMEIKNYEWFKTKGWQHEISVFLDKKSKLEIEAMASKGLRFL 370
Query: 342 G-KYIAKKIVQADYI 355
+YI +KI +D+I
Sbjct: 371 AFQYIPEKIKNSDFI 385
>gi|440633702|gb|ELR03621.1| hypothetical protein GMDG_06271 [Geomyces destructans 20631-21]
Length = 429
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 32/305 (10%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F + +++E + L T+R+++Y+ P+ F Q V+R I D+ L+
Sbjct: 130 AWKFAALLRILELSHEALVTGIVTTKRDIYYR----DPDLFIKQAIVDRYIDDLAFTLNI 185
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI--SGDLSLLEKLDLKTDAR 183
R +L IVA+++GL++G L + + + +++DCS+ + G + + D+S L
Sbjct: 186 PRDALNIVATAKGLLSGSLHIHKHDGQIVDCSS-ENEGILVPNTKDISHLSF----PSCN 240
Query: 184 YIIVVEKHAIFQRLTEDF---VFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
+I+V+EK A F+ L+ P +L+TAKGYPDIATR LLH L+ PI L
Sbjct: 241 WILVIEKEATFRTLSTTHHARTSRAGPGLLVTAKGYPDIATRALLHLLSSTRGCPPIYVL 300
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG----------LRGDDVQLIPEQS 289
D++P G++IL T+ GS + + A ++WLG +R D+ +
Sbjct: 301 TDYDPHGISILSTYAHGSASLAHQNDGLAVPGLRWLGVKLESAVGTQIRQDEDRGGEVPG 360
Query: 290 LLPLKPRDLQIARSLM-----SSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKY 344
+L L RD ++ RS++ E+ +E ++ E+ M+ +AE++ L G + LG++
Sbjct: 361 ILTLTKRDRRLGRSMLMRHPAMGEVGEEEWRREVQCMLFLNLKAEIQVL--GGGERLGRW 418
Query: 345 IAKKI 349
+ I
Sbjct: 419 VEGGI 423
>gi|209880219|ref|XP_002141549.1| DNA topoisomerase [Cryptosporidium muris RN66]
gi|209557155|gb|EEA07200.1| DNA topoisomerase, putative [Cryptosporidium muris RN66]
Length = 331
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 167/328 (50%), Gaps = 18/328 (5%)
Query: 39 SQGLLTDVSWIFLSHSFCTRSLTKSN----AAKAFVRVWKVMETCFQILSQEKRVTQREL 94
S G LTD++ H+ + SN + +V V T ++ Q +R++ REL
Sbjct: 11 SIGQLTDININPWLHNISRNNEIISNKNSITLRYIAKVICVANTLHNVIQQGRRMSLREL 70
Query: 95 FYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVI 154
+Y + F +Q Q ++ + +L R +LG+ S +G++ GR+ + + EV+
Sbjct: 71 YYH----NTWLFDNQNQATVIVRKISIMLRIPRRTLGLFPSPKGMIGGRITFRYKDIEVL 126
Query: 155 DCSACGSSGYSISG---DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILI 211
+ G +G I D+ +++++DA+YII++EK +IFQ L E + ++ ILI
Sbjct: 127 NIYNMGITGAIIGDNFEDIGEQSNIEVESDAQYIIIIEKASIFQYLMERKISDRFSCILI 186
Query: 212 TAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC- 270
T KG+PDIATR L+ L + L L D++P G+ I T+ GS E+ AC
Sbjct: 187 TGKGFPDIATRKLISYLVYKL-KITTLYLGDYDPPGINIYLTYVRGS--DNYESLIVACP 243
Query: 271 NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYK--EELSLMVHNGQRA 328
++ ++G+ +D +P + +PL D + +L+S I++ K + +M +G +
Sbjct: 244 HIYFMGIHYEDTFDLPCTTQIPLTKNDKTVLSNLLSDPIVKACNKLHGQCKMMFKSGYKC 303
Query: 329 EVEALYFHGYDYL-GKYIAKKIVQADYI 355
E+EA D+L Y+ K+++ +I
Sbjct: 304 ELEAFQAISSDFLVNSYLPNKLLKRSWI 331
>gi|227830214|ref|YP_002831994.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus L.S.2.15]
gi|227456662|gb|ACP35349.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
L.S.2.15]
Length = 389
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 158/325 (48%), Gaps = 31/325 (9%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE--------- 104
R+ N AK F++ + F L ++ T R+L+Y+ LL S E
Sbjct: 68 RNFLDLNEAKRFMQTVLMASIIFDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEEN 127
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
+ Q + + I D+ R + I++ +G V G L ++ N +VID S G Y
Sbjct: 128 TWDEQKESDSVIVDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DVIDLSKTGHGAY 186
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
+I L++ +D+ DA +++VVEK A+FQ+L + Q SILIT+ G PD ATR
Sbjct: 187 AIEPTPDLIDFIDV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRF 244
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV- 282
+ RLN LP+ L D +P G I F+ GSI + E+ R A + K+LG+ D+
Sbjct: 245 VRRLNEELK-LPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 283 ----------QLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVE 331
+ + ++ K D++ A + + E + + ++EE++ + + E+E
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIE 363
Query: 332 ALYFHGYDYLG-KYIAKKIVQADYI 355
A+ G +L +YI +KI DYI
Sbjct: 364 AMASKGLKFLAFQYIPEKITNKDYI 388
>gi|146304518|ref|YP_001191834.1| DNA topoisomerase VI subunit A [Metallosphaera sedula DSM 5348]
gi|145702768|gb|ABP95910.1| DNA topoisomerase (ATP-hydrolyzing) [Metallosphaera sedula DSM
5348]
Length = 386
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 38/373 (10%)
Query: 11 NFLKIL---NSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAK 67
NFL +L N +P + ++P R SN+ + + L RS N A+
Sbjct: 23 NFLTLLDQLNRGEPLVMEIP--KRTLSNTVYDEKR----KLLLLGEEKMKRSFLDMNEAR 76
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPEYFT-------SQLQVNRTI 116
F++ + + L ++ T R+L+Y+ ++ P+ T Q + + I
Sbjct: 77 RFMQTVLMGSIIYDALVNDEYPTIRDLYYRGKHSIILRDPKGKTHEENTWDEQKESDSVI 136
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL 176
D+ R + I++ +G V G + L+ N ++ID S G YSI L++ +
Sbjct: 137 IDIEVFTSLLREEMLILSKEKGKVVGDMRLRSGN-DIIDLSKMGHGAYSIEPTPDLIDFV 195
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
++ D Y++VVEK A+FQ+L + + ILIT+ G PD ATR L RLN LP
Sbjct: 196 EVNAD--YVLVVEKDAVFQQLHRAGFWRKYKCILITSAGQPDRATRRFLRRLNEELK-LP 252
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP--------- 286
+ L D +P G I F+ GSI + E+ R A + K+LG+ D+ P
Sbjct: 253 VYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDIFGTPKKKAYLSER 312
Query: 287 EQSLLPLKPRDLQIARSLM---SSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLG- 342
E+S +K ++ I R+L S ++++EE+++ + + E+EA+ G +L
Sbjct: 313 ERSSFIIKAKETDIKRALEIKNYSWFKTKSWEEEINMFLQKKAKLEIEAMASKGLKFLAF 372
Query: 343 KYIAKKIVQADYI 355
+YI +KI D+I
Sbjct: 373 QYIPEKIQTQDFI 385
>gi|3024738|sp|O05208.1|TOP6A_SULSH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|167745000|pdb|2ZBK|A Chain A, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745002|pdb|2ZBK|C Chain C, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745004|pdb|2ZBK|E Chain E, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745006|pdb|2ZBK|G Chain G, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|1926404|emb|CAA71605.1| type II DNA topoisomerase subunit A [Sulfolobus shibatae B12]
Length = 389
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 37/373 (9%)
Query: 10 INFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAF 69
+N ++ L +P + ++P+ R SN+ + + R+ N AK F
Sbjct: 26 LNLVEQLKKGEPLVMEIPM--RTLSNAIYDEKRKLLLL----GEKKLRRNFLDLNEAKRF 79
Query: 70 VRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE---------YFTSQLQVNRTI 116
++ + + L ++ T R+L+Y+ LL S E + Q + + I
Sbjct: 80 MQTVLMASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVI 139
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL 176
D+ R + I++ +G V G L ++ N +VID S G Y+I L++ +
Sbjct: 140 VDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DVIDLSKTGHGAYAIEPTPDLIDFI 198
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
D+ DA +++VVEK A+FQ+L + Q SILIT+ G PD ATR + RLN LP
Sbjct: 199 DV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELK-LP 255
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV-----------QL 284
+ L D +P G I F+ GSI + E+ R A + K+LG+ D+ +
Sbjct: 256 VYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMGDIFGNSRKKPYLSEA 315
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYLG- 342
+ ++ K D++ A + + E + + ++EE++ + + E+EA+ G +L
Sbjct: 316 ERKNYIIKAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAF 375
Query: 343 KYIAKKIVQADYI 355
+YI +KI DYI
Sbjct: 376 QYIPEKITNKDYI 388
>gi|197210319|gb|ACH48180.1| Spo11 [Acyrthosiphon pisum]
Length = 317
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 138/251 (54%), Gaps = 14/251 (5%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F + ++ ++ L +K T REL+Y D+ + S + V + + D+ LL +
Sbjct: 69 FTIIIYLLSKIYKNLMTKKSCTTRELYYG---DTILFKHSNI-VRKALIDICCLLGAKSW 124
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
LGI +S GLVAG L + N +++DCS + G I D +LE + ++ A+YI++V
Sbjct: 125 ELGITLTSSGLVAGNLKIYMSNGKILDCSD-TNEGIQIPQD--ILEIDNFESKAKYILIV 181
Query: 189 EKHAIFQRLTEDFVF--NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
EK+A FQ++ + + N+ ++IT KG+PDI TR + +L+ ++PIL LVD NP
Sbjct: 182 EKNASFQKIINEGLLKKNKCTFVMITGKGFPDINTRLFVKQLSCKL-NIPILVLVDANPF 240
Query: 247 GLAILCTFKFGSIGMGMEAYRYAC--NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSL 304
G+ I+C ++FGS M + C ++KWLG+ D++ + S + L D +SL
Sbjct: 241 GIEIMCVYRFGSNSM-VHQNEMLCVPSIKWLGVYPTDIESLNLPS-IALTNLDQDRLKSL 298
Query: 305 MSSEILQENYK 315
+ + N+K
Sbjct: 299 LKRSYINSNHK 309
>gi|328719464|ref|XP_003246771.1| PREDICTED: meiotic recombination protein SPO11 [Acyrthosiphon
pisum]
Length = 325
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 138/251 (54%), Gaps = 14/251 (5%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F + ++ ++ L +K T REL+Y D+ + S + V + + D+ LL +
Sbjct: 77 FTIIIYLLSKIYKNLMTKKSCTTRELYYG---DTILFKHSNI-VRKALIDICCLLGAKSW 132
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
LGI +S GLVAG L + N +++DCS + G I D +LE + ++ A+YI++V
Sbjct: 133 ELGITLTSSGLVAGNLKIYMSNGKILDCSD-TNEGIQIPQD--ILEIDNFESKAKYILIV 189
Query: 189 EKHAIFQRLTEDFVF--NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
EK+A FQ++ + + N+ ++IT KG+PDI TR + +L+ ++PIL LVD NP
Sbjct: 190 EKNASFQKIINEGLLKKNKCTFVMITGKGFPDINTRLFVKQLSCKL-NIPILVLVDANPF 248
Query: 247 GLAILCTFKFGSIGMGMEAYRYAC--NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSL 304
G+ I+C ++FGS M + C ++KWLG+ D++ + S + L D +SL
Sbjct: 249 GIEIMCVYRFGSNSM-VHQNEMLCVPSIKWLGVYPTDIESLNLPS-IALTNLDQDRLKSL 306
Query: 305 MSSEILQENYK 315
+ + N+K
Sbjct: 307 LKRSYINSNHK 317
>gi|385773196|ref|YP_005645762.1| DNA topoisomerase [Sulfolobus islandicus HVE10/4]
gi|385775830|ref|YP_005648398.1| DNA topoisomerase [Sulfolobus islandicus REY15A]
gi|323474578|gb|ADX85184.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus REY15A]
gi|323477310|gb|ADX82548.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus HVE10/4]
Length = 389
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 158/325 (48%), Gaps = 31/325 (9%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE--------- 104
R+ N AK F++ + + L ++ T R+L+Y+ LL S E
Sbjct: 68 RNFLDLNEAKRFMQTVLMASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEEN 127
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
+ Q + + I D+ R + I++ +G V G L ++ N +VID S G Y
Sbjct: 128 TWDEQKESDSVIVDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DVIDLSKTGHGAY 186
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
+I L++ +D+ DA +++VVEK A+FQ+L + Q SILIT+ G PD ATR
Sbjct: 187 AIEPTPDLIDFIDV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRF 244
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV- 282
+ RLN LP+ L D +P G I F+ GSI + E+ R A + K+LG+ D+
Sbjct: 245 VRRLNEELK-LPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 283 ----------QLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVE 331
+ + ++ K D++ A + + E + + ++EE++ + + E+E
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIE 363
Query: 332 ALYFHGYDYLG-KYIAKKIVQADYI 355
A+ G +L +YI +KI DYI
Sbjct: 364 AMASKGLKFLAFQYIPEKITNKDYI 388
>gi|227827527|ref|YP_002829307.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.14.25]
gi|229579029|ref|YP_002837427.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.G.57.14]
gi|229584730|ref|YP_002843232.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.27]
gi|238619684|ref|YP_002914510.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.4]
gi|284997637|ref|YP_003419404.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
gi|227459323|gb|ACP38009.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.14.25]
gi|228009743|gb|ACP45505.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.G.57.14]
gi|228019780|gb|ACP55187.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.27]
gi|238380754|gb|ACR41842.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.4]
gi|284445532|gb|ADB87034.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
Length = 389
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 158/325 (48%), Gaps = 31/325 (9%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE--------- 104
R+ N AK F++ + + L ++ T R+L+Y+ LL S E
Sbjct: 68 RNFLDLNEAKRFMQTVLMASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEEN 127
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
+ Q + + I D+ R + I++ +G V G L ++ N +VID S G Y
Sbjct: 128 TWDEQKESDSVIVDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DVIDLSKTGHGAY 186
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
+I L++ +D+ DA +++VVEK A+FQ+L + Q SILIT+ G PD ATR
Sbjct: 187 AIEPTPDLIDFIDV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRF 244
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV- 282
+ RLN LP+ L D +P G I F+ GSI + E+ R A + K+LG+ D+
Sbjct: 245 VRRLNEELK-LPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 283 ----------QLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVE 331
+ + ++ K D++ A + + E + + ++EE++ + + E+E
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIE 363
Query: 332 ALYFHGYDYLG-KYIAKKIVQADYI 355
A+ G +L +YI +KI DYI
Sbjct: 364 AMASKGLKFLAFQYIPEKITNKDYI 388
>gi|332797101|ref|YP_004458601.1| DNA topoisomerase VI subunit A [Acidianus hospitalis W1]
gi|332694836|gb|AEE94303.1| DNA topoisomerase VI, subunit A [Acidianus hospitalis W1]
Length = 386
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 161/323 (49%), Gaps = 29/323 (8%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPEYFT------ 107
RS N A+ F++ + + L + T R+L+Y+ ++ +P T
Sbjct: 67 RSFLDLNEARRFMQTTLMASIIYDALVNNEYPTIRDLYYRGKHSIVLKAPNGKTYEENTW 126
Query: 108 -SQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
Q + + I D+ R + I++ +G V G + ++ N +VID S G YSI
Sbjct: 127 DEQKESDSVIVDIEVFTSLLREDMLILSKEKGKVVGDMRIRSGN-DVIDLSKMGHGAYSI 185
Query: 167 SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
L++ +D+K D +++VVEK A+FQ+L + + + +IL+T+ G PD ATR +
Sbjct: 186 EPTPDLIDFVDVKAD--FVLVVEKDAVFQQLHREGFWKKYNAILVTSAGQPDRATRRFVR 243
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLI 285
RLN LP+ + D +P G I F+ GSI + E+ R A N ++LG+ D+
Sbjct: 244 RLNEELK-LPVYIMTDADPYGWYIYSVFRIGSINLSYESERLATPNARFLGVSMGDIFGT 302
Query: 286 P---------EQSLLPLKPRDLQIARSL--MSSEILQ-ENYKEELSLMVHNGQRAEVEAL 333
P E++ +K +D I R+L + E + + ++EE+++ + + E+EA+
Sbjct: 303 PKKKAYLTERERNAFIIKAKDYDIKRALEIKNYEWFKTKAWQEEINMFLQKKAKLEIEAM 362
Query: 334 YFHGYDYLG-KYIAKKIVQADYI 355
G +L +YI +KI D+I
Sbjct: 363 ASKGLKFLAFQYIPEKIQTNDFI 385
>gi|336371828|gb|EGO00168.1| hypothetical protein SERLA73DRAFT_107163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 296
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 33/288 (11%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGR-LMLQ 147
VT+R+++YK + F SQ V+R + DV A +R L + AS++GL+ G L++
Sbjct: 11 VTKRDMYYKDVS----LFKSQATVDRLVDDVAATFELNRSDLHVRASTKGLICGSGLLIH 66
Query: 148 EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP 207
E I + + + D+ ++ +++ D ++++VEK A+FQ L F P
Sbjct: 67 LTGGETIHINESEGALIPVGEDI---DRFEIEGDMAWVLIVEKDAVFQTLCR-LQFASHP 122
Query: 208 S-----ILITAKGYPDIATRFLLHRLNRAFPD-LPILALVDWNPAGLAILCTFKFGSIGM 261
S I+IT KGYPD+ATR L+ + P +PILALVD + G+ IL +K+GS +
Sbjct: 123 SLPGPGIIITGKGYPDVATRQLVKTFSDNLPSHIPILALVDGDAYGIDILSVYKYGSWSL 182
Query: 262 GMEAYRYACN-VKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMS--SEILQENYKE 316
E + A V+WLG+ ++ I S++P+ D + A ++ E + +++
Sbjct: 183 RHENGKLAAERVEWLGIWTSELADLGIDIDSMIPITKHDEKKAILMLQRPPETMPAPWRK 242
Query: 317 ELSLMVHNGQRAEVEALYFH-------------GYDYLGKYIAKKIVQ 351
EL M+H ++AE+E L H GY +L Y++ KI+
Sbjct: 243 ELMRMLHTRRKAEIEILSAHYSNNVKHTSTNIPGYPFLLHYLSGKIID 290
>gi|389739919|gb|EIM81111.1| DNA topoisomerase IV alpha subunit [Stereum hirsutum FP-91666 SS1]
Length = 406
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 158/284 (55%), Gaps = 20/284 (7%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
K +++ F ++++V++ + L + +T+R++ Y+ + F SQ V++ I D+ A
Sbjct: 80 KHASSRVFAQLFRVIDVAHEALVNDVPITKRDIHYQDVA----LFKSQRVVDQLIDDISA 135
Query: 122 LLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
+ R L + ASS+GL+ G L+L ++ + + S ++ D++ + DLKT
Sbjct: 136 TIGVGRGDLNVRASSKGLICGSSLVLHLVDEGELAVTDSEGSLIPVAEDIA---RFDLKT 192
Query: 181 DARYIIVVEKHAIFQ-----RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD- 234
+ ++++VEK A+FQ RLT P +++T KGYPD+ATR L+ L+ P+
Sbjct: 193 EIHWVLIVEKDAVFQTLCRLRLTYHPSLPG-PGLIVTGKGYPDLATRQLVKTLSDNLPET 251
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQL--IPEQSLL 291
+PILALVD + G+ I+ +KFGS + E+ R A V+ +GL ++ I SLL
Sbjct: 252 VPILALVDGDAYGIDIVSVYKFGSQALKHESERLAAERVQCIGLWSSELGELGIDNSSLL 311
Query: 292 PLKPRDLQIARSLM--SSEILQENYKEELSLMVHNGQRAEVEAL 333
+ D + AR+L+ + +L +K+EL M+ ++AE+E L
Sbjct: 312 QISAADEKKARNLLLRADPLLPMRWKKELQSMLFTRRKAEIEIL 355
>gi|430814299|emb|CCJ28443.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 367
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 147/274 (53%), Gaps = 23/274 (8%)
Query: 92 RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQ 151
R +FY+ + F Q V+ I+D+ R +L ++A++RGLV G + ++ N
Sbjct: 103 RNIFYRDV----NLFKEQKIVDNIIEDIAFTFKIRRSALNVLATARGLVCGYIKIKRKNL 158
Query: 152 EVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI---PS 208
+ I+C S I + +E ++++ D +I+VVEK + F+ LT +++
Sbjct: 159 DEINC--LQDSEVLIPSETE-IEGVEIEAD--WILVVEKESTFKTLTICKLYDHPVAGKG 213
Query: 209 ILITAKGYPDIATRFLLHRLNRAFP--------DLPILALVDWNPAGLAILCTFKFGSIG 260
++ITAKG+PDI+TR L+ ++++ PIL LVD +P G+ IL T+K+GS
Sbjct: 214 VIITAKGFPDISTREFLYMISKSISSSQNPYKRSTPILCLVDHDPYGIGILATYKYGSYA 273
Query: 261 MGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEE 317
++ A ++KW+G+ +D E +P+ D++ A L+ E +Q++ ++ E
Sbjct: 274 TAHNSHLMAIPSIKWVGVHSNDFDKTQENGYIPMSKHDVKKAFELLQKEWIQDHISWRNE 333
Query: 318 LSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQ 351
L M+ G +AE++ + + L +Y+A KI +
Sbjct: 334 LCRMLFTGMKAEIQLICENDGRCLTEYLADKIAK 367
>gi|153005629|ref|YP_001379954.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. Fw109-5]
gi|152029202|gb|ABS26970.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. Fw109-5]
Length = 367
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 161/302 (53%), Gaps = 17/302 (5%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFY---KLLCDSPE-YFTSQLQVNRTIQDVIA 121
AK F++ + V E C +++ K + R+L+Y L ++ + F Q + + I+D+
Sbjct: 70 AKKFMQTFLVSEACKELIDSGKTTSIRDLYYMTKHTLGETKQNTFEEQEESDPIIEDLEV 129
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL--- 178
+ R L + A+ RG + G + +++ + ID GS G+S+ S++E+ +
Sbjct: 130 AIDSLREELHLFATGRGSMVGPMTIRDSG-DTIDLRRMGSGGWSVP---SIVEEHVVQFT 185
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
KT+A+Y++++EK A+++R ED + + +++T +G P R L+ RL+ LP+
Sbjct: 186 KTEAKYVLLIEKDAVWRRFNEDKFWQREKCVIVTGQGQPPRGVRRLVQRLHTEL-KLPVY 244
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD--VQLIPEQSLLPLKP 295
LVD +P G I K GSI + E+ R A + +++GL D +P+ + +
Sbjct: 245 VLVDNDPWGFYIYSVMKQGSINLAYESMRMAVPDARFIGLSSFDKATYKLPDNVAIKMND 304
Query: 296 RDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQAD 353
+D A+ +++ Q ++ E+ MVH+GQ+ E+EAL G ++ +Y+ +K+ D
Sbjct: 305 QDNARAKQMLAYPWFQRPKWQREIEEMVHSGQKYELEALSRRGISFITEEYLPRKLRDRD 364
Query: 354 YI 355
++
Sbjct: 365 WL 366
>gi|392865657|gb|EAS31463.2| meiotic recombination protein spo11 [Coccidioides immitis RS]
Length = 383
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 182/367 (49%), Gaps = 53/367 (14%)
Query: 1 VRARIEVSVINFLKILNSPD--PAISDLPLINRKSSNSRVSQ---GLLTDVSWIFLSHSF 55
V+ IE ++ + L L+ PD P+++ L +++++N +++ L D + S ++
Sbjct: 21 VKQFIESTLASVLDELSKPDGRPSVT-LKRRSKRANNCSLNEETGALQVDTNGREWSVTY 79
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
T ++A K F + +++ + + + ++R+++Y P YF SQ V+
Sbjct: 80 SWPGKTVTDAWK-FGVIMRILGHISEAIEGKFISSKRDIYYL----DPAYFGSQRLVDGY 134
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS----------GYS 165
I D+ + R +L + A+++GL GR + N V+ G G+
Sbjct: 135 IDDIAYTVGVDRAALHVSAAAKGLTVGRYKINLQNGSVLKVGEHGEGILIPRAHEIVGFD 194
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATR 222
+SG R+I+++EK A+F RL T ++ ILIT KGYPD++TR
Sbjct: 195 LSG-------------VRWILIIEKEAVFHRLATSNYHATSAAGGGILITGKGYPDLSTR 241
Query: 223 FLLHRLN--RAFPD--LPILALVDWNPAGLAILCTFKFGSIGMGME-AYRYACNVKWLGL 277
L ++ R P +PI LVD +P G+AI+ T+K+GSI E A V+WLGL
Sbjct: 242 AFLRSISEWRNSPARFIPIYVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGL 301
Query: 278 RGDDVQLIP-----EQSLLPLKPRDLQIARSLMSSEIL-----QENYKEELSLMVHNGQR 327
R D IP ++ L+P+ RD A++++S ++ ++ ++ EL M+ +
Sbjct: 302 RASDTA-IPGNADVDRPLIPMTLRDRTRAQAMLSHSVIFSDEREQEWRLELQRMLMVNAK 360
Query: 328 AEVEALY 334
AE+E LY
Sbjct: 361 AEIEVLY 367
>gi|168003862|ref|XP_001754631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694252|gb|EDQ80601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 292
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 12/292 (4%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
KV++ +L Q + T+R+++Y +++++I D+ HCSR SL +
Sbjct: 3 KVLQIVEVLLQQNRHATKRDVYYNDTALLKGQMVIYSRLDQSINDICCFFHCSRPSLNLA 62
Query: 134 A-SSRG--LVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEK 190
+ RG LV G+L E + +I+CS S+ + + + + L + A YI++VEK
Sbjct: 63 TYAMRGSSLVTGQLSYYEEGR-LINCSKRSSTSNGLPVPVHINKVSHLSSSAEYILLVEK 121
Query: 191 HAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAI 250
+FQRL D + IL+T KGYPD+ATR L RL LP+ L+D +P GL I
Sbjct: 122 ETVFQRLANDKFCAKNCCILLTGKGYPDVATRSFLRRLVDQL-HLPVYGLMDGDPYGLDI 180
Query: 251 LCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSS 307
L ++FGS+ M +A A ++ WLG+ D+ + E LLP+ RD + A ++++
Sbjct: 181 LSIYRFGSLTMAYDAKVLAVPSILWLGIFLSDLGHFGLTENCLLPMSKRDEKKADAILNK 240
Query: 308 EILQE---NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+Q+ + +L+ + EVEA+ + L YI KI YI
Sbjct: 241 SYIQQLAPAWWSKLAEFRTRRVKLEVEAISTVSFTSLADHYIPSKIRGQCYI 292
>gi|296808905|ref|XP_002844791.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
gi|238844274|gb|EEQ33936.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
Length = 387
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 162/316 (51%), Gaps = 46/316 (14%)
Query: 57 TRSLTKSNAAKAFVRVWKVMETC----FQILSQ----EKRVTQRELFYKLLCDSPEYFTS 108
T +L S+ A+ W T F ++S+ ++R++FY+ P YF S
Sbjct: 62 TGALESSDEVHAYTYSWPGKTTQEGWRFGLISEAIDGNFTSSKRDIFYQ----DPVYFGS 117
Query: 109 QLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISG 168
Q V+R + D+ R +L + A+++G + G ++ N I AC + G +I
Sbjct: 118 QKLVDRYVDDIAFTFGVDRAALHVTAAAKGAIGGHFRIELKNGSSIQVEAC-AEGITIP- 175
Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATRFLL 225
+ +EK+D+ + +I+V+EK A++ RL T + + + IL+T KGYPD+++R L
Sbjct: 176 RIDEIEKIDV-SGISWILVIEKEAVYHRLVTSGYHKSSVAGNGILLTGKGYPDVSSREFL 234
Query: 226 HRL---------------NRAFPDLPILALVDWNPAGLAILCTFKFGSIG-MGMEAYRYA 269
L N AF LP+ LVD +P G+AI+ T+K+GS+ + AY
Sbjct: 235 RLLSQSSNQESSFNLLAANPAFASLPVYILVDSDPDGMAIMSTYKYGSMAQVHQNAYLNV 294
Query: 270 CNVKWLGLRGDD----VQLIPEQSLLPLKPRDLQIARSLM------SSEILQENYKEEL- 318
+++W+GL + V + SL+P+ RD + A +++ + + + ++++EL
Sbjct: 295 PSIQWIGLYASEMIPTVDFLNGSSLIPMSRRDRKKAEAMLNRNPCFAEDGPEPSWRKELQ 354
Query: 319 SLMVHNGQRAEVEALY 334
SL+V N +AE+E LY
Sbjct: 355 SLLVMN-MKAEIEILY 369
>gi|33304618|gb|AAQ02689.1| meiosis-specific topoisomerase Spo11 [Sordaria macrospora]
Length = 481
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 123/219 (56%), Gaps = 9/219 (4%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
+ F +++++E + L +T+R ++Y+ + E F SQ V+ + ++ L
Sbjct: 142 RRFEALFRIIELSHEALLSGTLITKRNIYYQNM----ELFRSQSMVDEMVDNLAFTLGVG 197
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R L IVA+++GL+AG++ L I+C+ SG + +S +EK+D ++ ++++
Sbjct: 198 RGDLNIVATAKGLIAGQVQLMMRGGTSINCAESSDSGVLLPS-ISAVEKIDFQS-VKWLL 255
Query: 187 VVEKHAIFQRLTED---FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
V+EK A F+ L+ V IL+T KGYPD+ATR L L+ P LP+ ALVD+
Sbjct: 256 VIEKEATFRTLSASRYHAVSRAGSGILVTGKGYPDLATRKFLATLHFVQPRLPMFALVDF 315
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
+ G++IL T+++GS + E ++WLG+R DV
Sbjct: 316 DTHGISILRTYQYGSQRLDHEERTKVPRLRWLGIRSSDV 354
>gi|374633765|ref|ZP_09706130.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
gi|373523553|gb|EHP68473.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
Length = 386
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 35/365 (9%)
Query: 16 LNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKV 75
L +P + ++P R SN+ + + L RS N A+ F++ +
Sbjct: 31 LEKGEPMVMEIP--KRTLSNTVYDE----QRKLLLLGSEKMKRSFLDMNEARRFMQTVLM 84
Query: 76 METCFQILSQEKRVTQRELFYK----LLCDSPEYFT-------SQLQVNRTIQDVIALLH 124
+ L ++ T R+L+Y+ ++ P+ T Q + + I D+
Sbjct: 85 GSIIYDALINDEYPTIRDLYYRGKHSIVIRDPKGKTHEENTWDEQKESDSVIIDIEVFTS 144
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
R + I++ +G V G + L+ N ++ID S G YSI L++ +++ D Y
Sbjct: 145 LLREEMLILSKEKGKVVGDMRLRSGN-DIIDLSKMGHGAYSIEPTPDLIDFVEVNAD--Y 201
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
++VVEK A+FQ+L + + +ILIT+ G PD ATR L RLN LP+ L D +
Sbjct: 202 VLVVEKDAVFQQLHRAGFWRKYRAILITSAGQPDRATRRFLRRLNEELK-LPVYILTDAD 260
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP---------EQSLLPLK 294
P G I F+ GSI + E+ R A + K+LG+ D+ P E+S +K
Sbjct: 261 PYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDIFGTPRKKPYLSERERSSFIIK 320
Query: 295 PRDLQIARSLMSSE---ILQENYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIV 350
++ I R+L ++++EE++ + + E+EA+ G +L +YI +KI
Sbjct: 321 AKETDIKRALEIKNYEWFKTKSWEEEINAFLQRKAKLEIEAMASKGLKFLAFQYIPEKIQ 380
Query: 351 QADYI 355
DYI
Sbjct: 381 TKDYI 385
>gi|393217646|gb|EJD03135.1| topoisomerase acting in meiosis [Fomitiporia mediterranea MF3/22]
Length = 339
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 17/289 (5%)
Query: 55 FCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNR 114
F ++ + A+ ++ KV+ + L + +T+R+LFY+ D P F +Q V+
Sbjct: 14 FYSKVESAGTNARHIAQLLKVVNEAHEALVNQSPMTKRDLFYR---DVP-LFNTQATVDA 69
Query: 115 TIQDVIALLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
+ D+ A R L I ASS+GL G L + + I ++ + D++
Sbjct: 70 LVDDLAATFSKKRSELNIRASSKGLFCGSALTIHLHDGSTITGHNSEAALIPEAQDIA-- 127
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI----PSILITAKGYPDIATRFLLHRLN 229
+ + D +I+VVEK A+FQ L+ + N P ILIT KGYPD+ATR L+ L+
Sbjct: 128 -EFCMNEDITWILVVEKDAVFQTLSRAGLTNHPSLPGPGILITGKGYPDLATRQLVKTLS 186
Query: 230 RAFP-DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLR-GDDVQL-I 285
P + ILALVD + GL I+ +K+GS+ M E A V+W+G+ G+ + L +
Sbjct: 187 DNMPEETRILALVDADAYGLDIVSVYKYGSMSMQHENESLAAERVEWIGVSAGEALSLGV 246
Query: 286 PEQSLLPLKPRDLQIARSLMSSEI-LQENYKEELSLMVHNGQRAEVEAL 333
+ LP+ D + A SL+ S I + ++ EL M+H ++AE E L
Sbjct: 247 DRDAFLPITVHDQRKAISLLQSRIQMPSAWRRELMQMLHTRRKAETEVL 295
>gi|296089901|emb|CBI39720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 69/336 (20%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSL---------- 130
Q+L + + ++R+++Y P F+ Q V+R I D+ LL CSR +L
Sbjct: 88 QLLQENRHGSKRDIYYM----HPSVFSDQSVVDRAINDICILLQCSRHNLNVVSVGKGKN 143
Query: 131 ------------------------GIVASSRG--------------------LVAGRLML 146
+V + G LV G L
Sbjct: 144 SKRRSNKSHTAEEDRIKSKSKPKQALVRTKEGKIFPIKNTKIILLRPLSKGLLVMGWLRF 203
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI 206
E ++ DC ++ Y + + + E D+ + A+YI+VVEK ++FQRL D N+
Sbjct: 204 LEAGKK-FDCINGPNTAYPVP--VHVEEVKDIVSVAQYILVVEKESVFQRLANDKFCNKN 260
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA- 265
I+IT +GYPDI TR L L L + LVD +P G IL T++FGS+ M +A
Sbjct: 261 RCIVITGRGYPDIPTRRFLRLLVEKL-HLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAK 319
Query: 266 YRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQE---NYKEELSL 320
+ ++WLG D + +PE LLPL D + +++ LQ+ +++ EL L
Sbjct: 320 FLRVPEIEWLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRCYLQQELLHWRLELEL 379
Query: 321 MVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
M+ G + E+EAL H +L + YI KI A+ +
Sbjct: 380 MLQRGVKFEIEALSVHSLSFLSENYIPSKIQVAEGV 415
>gi|194755593|ref|XP_001960068.1| GF11715 [Drosophila ananassae]
gi|190621366|gb|EDV36890.1| GF11715 [Drosophila ananassae]
Length = 330
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 13/264 (4%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y PE F SQ ++ R DV +L S LG++A+S+GLVAG +
Sbjct: 74 TVRGLYY----GDPELFLSQNRMARARLDVCRMLSTSPMHLGVLAASKGLVAGDVQFLMT 129
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N +V+DCS G + ++ + +E+++ T A ++VVEK ++F+ L +F
Sbjct: 130 NGDVLDCSVYGGA-VTLPWNPENVERME--TQAELVLVVEKESVFESLLSRNIFATFGRR 186
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
ILIT KGYPD TR +LHRL LP LVD +P G+ I+ ++ GS M +
Sbjct: 187 FILITGKGYPDCCTRRILHRLTEE-NHLPAYILVDADPFGIEIMLVYRHGSQAMSFSSRG 245
Query: 268 YAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
Y +++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 246 YTTPSLRWIGLHPSEIAALGGGA-VALGTGDNKKINDLLARSGLEAGVRQELRMLREVQL 304
Query: 327 RAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I +K+
Sbjct: 305 KAEIESVICFLSEDYIPNKIKRKL 328
>gi|346975573|gb|EGY19025.1| meiotic recombination protein rec12 [Verticillium dahliae VdLs.17]
Length = 425
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 165/348 (47%), Gaps = 57/348 (16%)
Query: 26 LPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQ 85
+P R+ SR S GLL F + A F RV K++ L
Sbjct: 74 IPYKARRPGTSRASAGLL----------RFPG---STPREASKFARVMKILSLSHGALVG 120
Query: 86 EKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLM 145
+T+R +FY+ + E F SQ V++ + D+ L+ R L IVA+ +GL +G +
Sbjct: 121 GTILTKRNIFYQDV----ELFGSQANVDQLVDDLAFTLNLGRDVLNIVAAGKGLASGPVT 176
Query: 146 LQEPNQEVIDCSACGSSGYSI----------SGDL--SLLEKLDLK-TDARYIIVVEKHA 192
+ N +D S+ + +++ G L S+ + + + ++++V+EK A
Sbjct: 177 IHLQNGTQVDMSSGSTVWHTLLRRFIVVLTWQGILIPSVRDVVGMNFASTKWVLVIEKEA 236
Query: 193 IFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
F+ L + + + +++T KGYPD+ TR LH + PD+PI+ LVD++P GL
Sbjct: 237 AFRPLAVQQYWRKSSAGHGVIVTGKGYPDLVTRSFLHAIQAMKPDMPIVCLVDFDPDGLR 296
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV------------QLIPEQ------SLL 291
I+ +K GS + E + ++WLG+R D+ + +P + +++
Sbjct: 297 IMQCYKHGSQSLRHEIHVVLPRLQWLGIRSADLMPDGQRGADGDREGVPRELPADPATVM 356
Query: 292 PLKPRDLQIARSLMSS------EILQENYKEELSLMVHNGQRAEVEAL 333
PL RD AR L++S ++ Y+ EL +M+ G + E++A+
Sbjct: 357 PLSLRDRSCARKLLASFDEDGADVDDSEYRRELQIMLVLGVKGEIQAV 404
>gi|145967212|gb|ABP98998.1| meiotic transesterase, partial [Trypanosoma brucei]
Length = 463
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 139/306 (45%), Gaps = 70/306 (22%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L+ +F Q VNR IQ ++ L R LG+V +RG V G L
Sbjct: 159 TQRDVYYRLV----RFFPDQGCVNRVIQQLVQQLGLPRQLLGVVPGTRGCVGGSLSFHG- 213
Query: 150 NQEVIDCSACGSSGYSIS---GDLSL------------------LEKLDLKTDARYIIVV 188
ID S G + +LS+ +E +L D RYIIVV
Sbjct: 214 ----IDLRRYSSEGLPLPVLREELSVVWRPKHECESIPVHSPEDIEGFELHNDIRYIIVV 269
Query: 189 EKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD--LPILALVDWNPA 246
EKHA+F RL E+ +F+++ +L+T+ G+P A LL L+R D +P++ALVD+NP+
Sbjct: 270 EKHAVFFRLMEEKIFDRVSCVLLTSHGFPTAAALTLLSNLHRTATDVGVPVVALVDYNPS 329
Query: 247 GLAILCTFKFGSIGMGMEAYRYACNVKWLGLR------------------------GDDV 282
GL+IL +K + + Y +++WLGLR GD V
Sbjct: 330 GLSILQQYKHDTGRIQENRYASVHSLRWLGLRGCHVLHDGSTEVTDSQCLSSGIHAGDAV 389
Query: 283 QLIPEQSLLPLKP--------------RDLQIARSLMSSEILQENYKEELSLMVHNGQRA 328
IP + LP +P R I + E Q + E +M + +
Sbjct: 390 GHIPRVARLPFQPFTQRDDVMISNIIARWAAIWKGCDDGEDAQRVWFREAQIMQTSRVKV 449
Query: 329 EVEALY 334
E+EA+Y
Sbjct: 450 ELEAIY 455
>gi|72389502|ref|XP_845046.1| meiotic recombination protein SPO11 [Trypanosoma brucei TREU927]
gi|62176729|gb|AAX70829.1| meiotic recombination protein SPO11, putative [Trypanosoma brucei]
gi|70801580|gb|AAZ11487.1| meiotic recombination protein SPO11, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 431
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 139/306 (45%), Gaps = 70/306 (22%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L+ +F Q VNR IQ ++ L R LG+V +RG V G L
Sbjct: 96 TQRDVYYRLV----RFFPDQGCVNRVIQQLVQQLGLPRQLLGVVPGTRGCVGGSLSFHG- 150
Query: 150 NQEVIDCSACGSSGYSIS---GDLSL------------------LEKLDLKTDARYIIVV 188
ID S G + +LS+ +E +L D RYIIVV
Sbjct: 151 ----IDLRRYSSEGLPLPVLREELSVVWRPKHECESIPVHSPDDIEGFELHNDIRYIIVV 206
Query: 189 EKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD--LPILALVDWNPA 246
EKHA+F RL E+ +F+++ +L+T+ G+P A LL L+R D +P++ALVD+NP+
Sbjct: 207 EKHAVFFRLMEEKIFDRVSCVLLTSHGFPTAAALTLLSNLHRTATDVGVPVVALVDYNPS 266
Query: 247 GLAILCTFKFGSIGMGMEAYRYACNVKWLGLR------------------------GDDV 282
GL+IL +K + + Y +++WLGLR GD V
Sbjct: 267 GLSILQQYKHDTGRIQENRYASVHSLRWLGLRGCHVLHDGSTEVADSQCLSSGIHAGDAV 326
Query: 283 QLIPEQSLLPLKP--------------RDLQIARSLMSSEILQENYKEELSLMVHNGQRA 328
IP + LP +P R I + E Q + E +M + +
Sbjct: 327 GHIPRVARLPFQPFTQRDDVMISNIIARWAAIWKGCDDGEDAQRVWFREAQIMQTSRVKV 386
Query: 329 EVEALY 334
E+EA+Y
Sbjct: 387 ELEAIY 392
>gi|321478172|gb|EFX89130.1| meiotic recombination protein Spo11 [Daphnia pulex]
Length = 295
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 144/266 (54%), Gaps = 15/266 (5%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+++Y + + SQ ++ + + LL+ R L I A+S+GLVAG L +
Sbjct: 33 TKRDIYY----EDVSLWGSQPVLDSMVTQMTKLLNIPRCCLNIGATSKGLVAGSLNFLDG 88
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
+ ++IDC +G I D+ L + ++ A ++VVEK + FQ+L +D + I
Sbjct: 89 DGKLIDCQT--PTGILIPNDVEKLSQ--FRSKAHLVLVVEKDSTFQKLIDDKIERFIGDC 144
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
ILIT KGYPD+ TR L RL LP LALVD +P G++IL ++FGS + +
Sbjct: 145 ILITGKGYPDVNTRRFLRRLWDEL-QLPPLALVDADPHGISILAVYRFGSQNLEDIEHLS 203
Query: 269 ACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHN 324
++++GL+ D++ IP+++ LPL RD + +L S + +N ++++ L+
Sbjct: 204 TPQLRYIGLQPSDIEALQIPDEAKLPLTQRDRSLVDTLASRPFITQNQLLRDQVKLLRRL 263
Query: 325 GQRAEVEALYFHGYDYLGK-YIAKKI 349
+ E++ L +L + Y+ KI
Sbjct: 264 DCKVEIQGLTKIHPQFLSRTYLPAKI 289
>gi|290979667|ref|XP_002672555.1| predicted protein [Naegleria gruberi]
gi|284086132|gb|EFC39811.1| predicted protein [Naegleria gruberi]
Length = 374
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 27/260 (10%)
Query: 52 SHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQ 111
S +F +SL K+N K VW +M+ +L+ K++TQRELFY + F Q+Q
Sbjct: 107 SGTFEKKSL-KNNHLKKNHLVWLLMKDVHLLLNCRKKITQRELFYM----NVTTFRDQIQ 161
Query: 112 VNRTIQDVIALLHCSRFSLGIVASSRGLV---AGR---LMLQEPNQEVIDCSACGSSGYS 165
NR + V +L R L I+ S+G + GR L+ N++ +S S
Sbjct: 162 CNRCLSTVGDVLKVDRSLLNIICMSKGFIYSNDGRGNSLLSLNGNKQ--------ASVES 213
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS-ILITAKGYPDIATRFL 224
I GD +D + ++++EK AIF+RL ED +F + + +LIT GYP I TR++
Sbjct: 214 IPGDFP---SIDYFGNVDTVLIIEKDAIFRRLVEDKIFKLVRNCLLITGCGYPSIVTRYV 270
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVK----WLGLRGD 280
+ ++ FP+ + AL D+N G I+ T+K+GS+ M + +K WLG+ +
Sbjct: 271 VKHVSTRFPNARLYALCDFNIFGYQIMSTYKYGSVEMSRHKVQQESALKDRLQWLGMNYE 330
Query: 281 DVQLIPEQSLLPLKPRDLQI 300
DV+ IP P+ R++ +
Sbjct: 331 DVKDIPHYYNQPISQREINL 350
>gi|283778748|ref|YP_003369503.1| DNA topoisomerase [Pirellula staleyi DSM 6068]
gi|283437201|gb|ADB15643.1| DNA topoisomerase (ATP-hydrolyzing) [Pirellula staleyi DSM 6068]
Length = 384
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 21/329 (6%)
Query: 25 DLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILS 84
++ +++R SN + +Q + + S +R L + AKAF++ V C +++
Sbjct: 49 EMSILSRSLSNVKFNQSQKI----LEMGSSKTSRELFNLSQAKAFMQTVLVGSGCKRLIE 104
Query: 85 QEKRVTQRELFYKLL----CDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q K + R L+Y L S E F Q + + I+DV LL R L + A RG +
Sbjct: 105 QGKTTSLRGLYYMLKHTIDGTSEETFEEQSESDTMIEDVEVLLSSLREELHLYAQKRGEM 164
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE--KLDLKT-DARYIIVVEKHAIFQRL 197
G++ + + E IDC+ GS GY I S++E ++ K A++I+ VEK ++QR
Sbjct: 165 VGQITVVDSGDE-IDCTRMGSGGYGIP---SIVEPDRITFKNVKAKFILHVEKDTVWQRF 220
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
ED + + IL G P R +L+RL+ LP+ L+D +P G I K G
Sbjct: 221 NEDKFWLKHNCILTHGAGQPPRGVRRMLYRLHNELK-LPVYCLLDNDPWGYYIYSVIKQG 279
Query: 258 SIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSE----ILQE 312
SI + E+ R A ++LGLR D S + +K D I R+ + I ++
Sbjct: 280 SINLAYESERMAIPGARYLGLRSLDYDRCGLSSSVKIKLNDQDIKRAKQIASYPWFIKKK 339
Query: 313 NYKEELSLMVHNGQRAEVEALYFHGYDYL 341
+++E+ +M+ NG + EVE+L Y+
Sbjct: 340 AWQKEIEMMLKNGFKLEVESLISKDISYV 368
>gi|302348021|ref|YP_003815659.1| type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
gi|302328433|gb|ADL18628.1| Type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
Length = 387
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 180/378 (47%), Gaps = 38/378 (10%)
Query: 6 EVSVINFLKILNSPDP-AISDLPLINRKSSNS--RVSQGLLTDVSWIFLSHSFCTRSLTK 62
E+ FL +L+S + A L + R +N+ V +G+L L S R
Sbjct: 19 EIIYKTFLNLLSSLEKGADPKLVIPKRTLANTVFDVEKGILK------LGVSKLERKFLD 72
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK-----LLCD------SPEYFTSQLQ 111
N ++ F++ + ++ L + + T R+L+Y+ + D + Q +
Sbjct: 73 MNESRRFMQTLVMAANIYRALIENEYPTIRDLYYRGKHTIVFHDLDGRHREENTWDEQAE 132
Query: 112 VNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLS 171
+ ++D+ +L R L I++ +G V G + ++ N ++ID S G Y+I
Sbjct: 133 SDAALRDLEVMLGLLREDLMILSKEKGKVVGNMRIRSGN-DIIDLSKLGHGAYAIESTPD 191
Query: 172 LLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
L+E LD+ DA +++VVEK A+FQ+L + + SIL+T G PD ATR + RLN
Sbjct: 192 LIEFLDV--DAEFVLVVEKDAVFQQLHRVGFWQKYKSILVTGAGQPDRATRRFVRRLNEE 249
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV-------- 282
LP+ L D +P G I FK GSI + E+ R A K+LG+ D+
Sbjct: 250 L-GLPVYVLTDSDPYGWYIYSVFKVGSIQLSYESERLATPKAKFLGVSMSDIFGYGRKKP 308
Query: 283 QLIPEQS---LLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGY 338
L E+ ++ K D++ A+ LM+ + +K E+ + + + E+EA+ G
Sbjct: 309 YLTEEERRNYIIKAKDLDIRRAKELMNYSWFRTPLWKREIDMFLDKKAKLEIEAMASKGL 368
Query: 339 DYLG-KYIAKKIVQADYI 355
+L +Y+ +KI D+I
Sbjct: 369 KFLAFQYLPEKIQTHDWI 386
>gi|240277734|gb|EER41242.1| meiosis-specific topoisomerase Spo11 [Ajellomyces capsulatus H143]
Length = 380
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 58/334 (17%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA--FVRVWKVMETCFQILSQE 86
+ R+S++S S T + CT S A +A F + +++ + + +
Sbjct: 59 LKRRSNHSHFSLHPETGALQRDTTEPSCTYSWPGKTAQEAWRFAVLLRILGHISEAIRGD 118
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML 146
++R+++Y P YF SQ V+R I D+ + R +L + A+++G+V G L+
Sbjct: 119 FISSKRDIYYL----DPVYFGSQSVVDRCIDDIACTIGVDRTALHVAAAAKGVV-GMLV- 172
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQ 205
P E + +K+D T R+I+V+EK A F RL T +F
Sbjct: 173 --PRVETV-------------------KKIDTST-IRWILVIEKEATFHRLATVNFHTTS 210
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDL---------PILALVDWNPAGLAILCTF 254
ILIT KGYPDI+TR LH L+R P PI LVD +P G+AI+ T+
Sbjct: 211 AAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIFMLVDGDPDGMAIMSTY 270
Query: 255 KFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP-------EQSLLPLKPRDLQIARSLMS 306
K+GS + A NV+WLGL+ +L+P + +L+PL RD + A+ ++
Sbjct: 271 KYGSRAQAHDNTNLAVHNVQWLGLQAS--ELVPSSLEIQGDDALIPLTSRDRKKAQDMLG 328
Query: 307 -SEILQEN-----YKEELSLMVHNGQRAEVEALY 334
S + E+ ++ EL M+ +AE+E LY
Sbjct: 329 RSPVFAEDGPEPAWRRELQHMLMTNVKAEIEMLY 362
>gi|330834337|ref|YP_004409065.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
gi|329566476|gb|AEB94581.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
Length = 386
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 29/332 (8%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE 104
+ L RS N A+ F++ + + L ++ T R+L+Y+ ++ P+
Sbjct: 58 LLLGEDKMKRSFLDMNEARRFMQTVLMGSIIYDALVNDEYPTIRDLYYRGKHSIVIRDPK 117
Query: 105 YFT-------SQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
T Q + + I D+ R + I++ +G V G + L+ N +VID S
Sbjct: 118 GKTHEENTWDEQKESDSVIIDIEVFTSLLREEMLILSKEKGKVVGDMRLRSGN-DVIDLS 176
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G YSI L++ +++ D +++VVEK A+FQ+L + + +LIT+ G P
Sbjct: 177 KMGHGAYSIEPTPDLIDFVEVNAD--FVLVVEKDAVFQQLHRAGFWRKYKCVLITSAGQP 234
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
D ATR L RLN LP+ L D +P G I F+ GSI + E+ R A + K+LG
Sbjct: 235 DRATRRFLRRLNEELK-LPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLG 293
Query: 277 LRGDDVQLIP---------EQSLLPLKPRDLQIARSLMSSE---ILQENYKEELSLMVHN 324
+ D+ P E+S +K ++ I R+L + ++EE+++ +
Sbjct: 294 VSMGDIFGTPRKKPYLSERERSSFIIKAKETDIKRALEIKNYDWFKTKGWEEEINIFLQR 353
Query: 325 GQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ E+EA+ G +L +YI +KI D+I
Sbjct: 354 KSKLEIEAMASKGLKFLAFQYIPEKIQTKDFI 385
>gi|308491496|ref|XP_003107939.1| CRE-SPO-11 protein [Caenorhabditis remanei]
gi|308249886|gb|EFO93838.1| CRE-SPO-11 protein [Caenorhabditis remanei]
Length = 448
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 29/295 (9%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S+ K R + + +L +K+ T+RELFY + + +Q ++ +I+ + L
Sbjct: 100 SHRKKKLDRDLHCLHQVYDLLENDKKSTKRELFY----EHKAIYEAQRNLDSSIRSICEL 155
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL---DLK 179
L+ SR +L ++A RG++ G + + VID D+ + + L D
Sbjct: 156 LNESRANLNVLACGRGILRGAITFLVEDVGVIDARV---------QDVLITDSLLFSDQV 206
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
++A +++VVEK FQ+L ++ P IL+T+KGYPDI+TR +L L+ LPI
Sbjct: 207 SEAEFVLVVEKDTTFQKLIDEKFQIMFPRGILVTSKGYPDISTRNVLKMLSEKRK-LPIY 265
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAY-RYACNVKWLGLRGDDVQ--LIPEQSLLPLKP 295
L D +P G+ I T+K+G+ E + +++W+GL D + I LPL
Sbjct: 266 GLFDADPHGIEIYLTYKYGAAKETAEGRGAFVSSIQWIGLFPTDFKRFFIDPSQCLPLLR 325
Query: 296 RDL-----QIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYI 345
D I RS+ E L EL M+ N + E+E++ G +Y+GKY+
Sbjct: 326 SDFVKIENMIPRSIQLGECL---VTRELDWMIQNAFKLELESINMCGPEYMGKYL 377
>gi|15921561|ref|NP_377230.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
gi|22654151|sp|Q971T1.1|TOP6A_SULTO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|15622347|dbj|BAB66339.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
Length = 387
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 29/323 (8%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPEYFT------ 107
RS N +K F++ + + L ++ T R+L+Y+ ++ P T
Sbjct: 68 RSFFDLNESKRFMQTVLMASIIYDALINDEYPTIRDLYYRGKHSIILKDPRGKTYEENTW 127
Query: 108 -SQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
Q + + I D+ R + I++ +G V G + ++ N ++ID S G YSI
Sbjct: 128 DEQKESDSVIMDIEVFTSLLREDMLILSKEKGKVVGDMRIRSGN-DIIDLSKMGHGAYSI 186
Query: 167 SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
L++ +D+ +A +++VVEK A+FQ+L + Q +IL+T+ G PD ATR +
Sbjct: 187 EPTPDLIDFVDI--NAEFVLVVEKDAVFQQLHRAGFWKQYKAILVTSAGQPDRATRRFVR 244
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--- 282
RLN LP+ L D +P G I F+ GSI + E+ R A N K+LG+ D+
Sbjct: 245 RLNEELK-LPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPNAKFLGVSMTDIFGD 303
Query: 283 ----QLIPEQS----LLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEAL 333
+ EQ ++ K D++ A + + + + + ++ E+ + ++ + E+EA+
Sbjct: 304 SNKKPYLSEQERRNYIIKAKDADIKRATEIKNYQWFKTKAWQHEIEIFLNKKSKLEIEAM 363
Query: 334 YFHGYDYLG-KYIAKKIVQADYI 355
G +L +YI +KI DYI
Sbjct: 364 ASKGLKFLAFQYIPEKIKSKDYI 386
>gi|429217560|ref|YP_007175550.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
gi|429134089|gb|AFZ71101.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
Length = 385
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 29/323 (8%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK-----LLCD------SPEYF 106
R+ N +K F++ + +Q L + + T R+L+Y+ L D +
Sbjct: 66 RNFLNMNESKKFMQTLLMASIIYQALVENEYPTIRDLYYRGKHTILYKDLNGKLKEENTW 125
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
Q + + +I+DV +L R + I++ +G V G + ++ N +VID S G Y+I
Sbjct: 126 EEQSESDASIRDVEVMLGLLREDMLILSKEKGKVVGNMRIRSGN-DVIDLSKLGHGAYAI 184
Query: 167 SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
L+E LD DA ++VVEK A+FQ+L + + ++L+T G PD ATR +
Sbjct: 185 ESTPDLIEFLDY--DAEMVLVVEKDAVFQQLHRAGFWQKYKALLVTGAGQPDRATRRFVR 242
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--- 282
RL+ LP+ L D +P G I FK GSI + E+ R A K+LG+ D+
Sbjct: 243 RLHDELK-LPVYILTDSDPYGWYIYSVFKVGSIQLSYESERLATPKAKFLGVSMSDIFGY 301
Query: 283 ----QLIPEQS----LLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEAL 333
+ E+ ++ K D++ A+ LM +K E+ + + + E+EA+
Sbjct: 302 GTKKAYLSEEERRNFIIKAKDVDIKRAKELMRYSWFHSKLWKREIDMFMDKKAKLEIEAM 361
Query: 334 YFHGYDYLG-KYIAKKIVQADYI 355
G +L +YI +KI D+I
Sbjct: 362 ASKGLKFLAFQYIPEKIQTNDWI 384
>gi|449298114|gb|EMC94131.1| hypothetical protein BAUCODRAFT_74427 [Baudoinia compniacensis UAMH
10762]
Length = 395
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 49/334 (14%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
R++S+S G DV F F R + A F V +++E + LS K +
Sbjct: 47 TRQASSSSHENGNARDVK--FRRLCFPGRGVED---AWRFTVVLRMLELVHEALSTGKTL 101
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
++R+++Y+ P F SQ V+R I D+ R +L + A ++GL+ G +
Sbjct: 102 SKRDIYYR----DPALFGSQTHVDRYIDDIAFTFDVPRSALNVTAVAKGLILGAVTF--- 154
Query: 150 NQEVIDCSACGSSGYS-------ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFV 202
C GS+ + + LS L + +K ++++V+EK A F+ L
Sbjct: 155 ------CRRDGSNANAAVDREGVLVPPLSELLSVSMKA-VKWVLVIEKEASFRSLASSNF 207
Query: 203 FNQIPS--ILITAKGYPDIATRFLLHRLNR-----AFPDLPILALVDWNPAGLAILCTFK 255
++++ + +L+T KGYPDIATR LL L+ F P+ LVD++P GLAIL T+K
Sbjct: 208 WDRLSTEGVLLTGKGYPDIATRALLRFLSEPSPQNGFASPPVYGLVDFDPDGLAILATYK 267
Query: 256 FGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPE-----QSLLPLKPRDLQIARSLMSS-- 307
GS + E +KWLGLR + + + + Q L+ L PRD AR ++
Sbjct: 268 HGSFALAHENSSLQVPQLKWLGLRSEHILMESDDPHASQGLMMLTPRDRGKARKMLERSV 327
Query: 308 --------EILQENYKEELSLMVHNGQRAEVEAL 333
E E ++ L +M+ +AE++ L
Sbjct: 328 PGSISGALEADSEEWRGALQVMLMLNVKAELQLL 361
>gi|380495490|emb|CCF32355.1| type IIB DNA topoisomerase [Colletotrichum higginsianum]
Length = 344
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 33/295 (11%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
+ A F R+ ++++ L+ + +T+R ++Y+ F Q V+ + D+ L
Sbjct: 37 HEATKFTRLMRILQMSLGALTAGRTITKRSIYYQ----DEHLFKQQSIVDNLVDDLAYTL 92
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
R LGIVA+S+GLVAG ++++ Q +D S S + ++D R
Sbjct: 93 GLGREDLGIVATSKGLVAGPILIRTKPQSDLDPIRGTPSELDASSTREI-SQIDFGP-VR 150
Query: 184 YIIVVEKHAIFQRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
+++V+EK A F+ L ++ ILIT KGYPD+ T+ LH ++ P+LPILAL
Sbjct: 151 WVLVIEKDATFRTLAARRYYDTSTCGSGILITGKGYPDLVTKQFLHLIHDVKPELPILAL 210
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQ------SLLPLK 294
VD++ G+AI+ + GS G E ++ WLG++ D L P Q S PL
Sbjct: 211 VDYDYDGIAIMRCYSHGSRGHAHERNTVVPSMAWLGIKSGD--LAPRQEEGSDGSQRPLG 268
Query: 295 P-----------RDLQIARSLMSS-EILQENY----KEELSLMVHNGQRAEVEAL 333
P +D + A L+S + +Y + EL +M+ G +AE++A+
Sbjct: 269 PNLFEHSSSITRKDRKSAARLISGIDEDGTDYDIDCRRELQVMLFLGAKAEIQAV 323
>gi|195431580|ref|XP_002063814.1| GK15872 [Drosophila willistoni]
gi|194159899|gb|EDW74800.1| GK15872 [Drosophila willistoni]
Length = 346
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 148/273 (54%), Gaps = 16/273 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
++L++ T R L+Y+ + + +Q + DV +L+ + F LGI+++S+GL+
Sbjct: 80 RLLAEGGSCTVRGLYYR----NTQLIRAQSFIVAAKLDVCRILNTAPFHLGILSASKGLL 135
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
AG + + N +++DC+A G + S+ D ++ +D T A +++VEK ++F+ L
Sbjct: 136 AGDIRMTMSNGDILDCNAYGGA-ISLPIDFENVDHID--TRAELVLIVEKESVFESLLSR 192
Query: 201 FVFNQ--IPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGS 258
+FN I IL+T KGYPD +TR L+HRL F +LP LVD +P G+ I+ ++ GS
Sbjct: 193 NIFNSFGIRLILVTGKGYPDCSTRRLVHRLTMEF-NLPAYILVDADPFGIEIMLVYRHGS 251
Query: 259 IGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEE 317
+ + A +++W+GL ++ + PL D + +++ + + ++E
Sbjct: 252 QSLDFTSNLLATPSLRWVGLHPSEICSLAIGGTAPLSQEDNKKINDMLNRKNMDLGVRQE 311
Query: 318 LSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKI 349
L + +AE+E++ D+L G YI K+
Sbjct: 312 LYKLQQMQLKAEIESV----LDFLCGDYIPNKV 340
>gi|327354903|gb|EGE83760.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis ATCC
18188]
Length = 403
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 32/270 (11%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
++R+++Y P YF SQ V+R I D+ + R +L + A+++GL+ G +
Sbjct: 119 SKRDIYYL----DPVYFGSQSVVDRCIDDIACTIGVDRTALHVAAAAKGLLVGSFNITLN 174
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQI-- 206
+ V+D S G + + D+ R+I+V+EK A F RL T ++
Sbjct: 175 DDSVVD-PGVHSEGMLVP-RAETVRNFDISA-VRWILVIEKEATFHRLATANYHKTSAAG 231
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDL---------PILALVDWNPAGLAILCTFKFG 257
P ILITAKGYPDI TR LH L+R + PI LVD +P G+AI+ T+K+G
Sbjct: 232 PGILITAKGYPDICTRAFLHLLSRTPGSVSGALRSNQPPIFMLVDSDPDGIAIMSTYKYG 291
Query: 258 SIGMGMEAYRYACN-VKWLGLRGDDVQLIPE------QSLLPLKPRDLQIARSLMS-SEI 309
S + N ++WLGL+ +V E L+PL RD + A+ ++S S +
Sbjct: 292 SRAQAHDNPNLTVNKMQWLGLQSSEVASRIEVYQQDDDVLIPLTSRDRKKAQDMLSRSPV 351
Query: 310 LQEN-----YKEELSLMVHNGQRAEVEALY 334
E+ ++ EL M+ + +AE+E LY
Sbjct: 352 FAEDGPEPAWRGELQHMLMSNVKAEIEILY 381
>gi|405945979|gb|EKC17530.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 236
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 127/220 (57%), Gaps = 14/220 (6%)
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
++ R+ L ++A+S+G +AG L + + +DCS +G + + LE + +TD
Sbjct: 1 MIQVPRWRLHVLATSKGCIAGNLCFHDVDGNYVDCSQT-KAGIQVPSHIEGLEHI--QTD 57
Query: 182 ARYIIVVEKHAIFQRL-TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF-PDLPILA 239
A ++VVEK AIFQRL +E F P I+IT KG+PD+ TR LL+RL R F P I
Sbjct: 58 ADLVLVVEKDAIFQRLLSEGFCERMRPCIVITGKGFPDMNTRMLLNRLWREFSPKFYI-- 115
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPR 296
LVD +P G+ I+ +K+GS + EA ++WLG+ D+Q + E SL+ LK
Sbjct: 116 LVDADPYGIEIMTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKEDSLIDLKLS 175
Query: 297 DLQIARSLMSSEILQEN---YKEELSLMVHNGQRAEVEAL 333
D +++ + ++ YK EL++++ G++AE+E+L
Sbjct: 176 DRNKISDILARPYISKSQLLYK-ELNVLLDLGKKAEIESL 214
>gi|322786130|gb|EFZ12738.1| hypothetical protein SINV_13918 [Solenopsis invicta]
Length = 219
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 130/227 (57%), Gaps = 10/227 (4%)
Query: 130 LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVE 189
LG++A+++GLVAG + + + +VIDC+ G G I +S + ++ A +++V+E
Sbjct: 1 LGLLATAKGLVAGNMTITLVDNQVIDCTIPG--GVQIPQIISNVT--SIRAKAEFVLVIE 56
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
K IFQ+L E+ + IL+T KGYPD+ATR L+ L+ +LP+ +VD +P G+
Sbjct: 57 KDTIFQKLLEENCCRILRCILVTGKGYPDVATRMLVKMLSEKL-NLPVYIVVDADPFGIE 115
Query: 250 ILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSE 308
I+ ++FGS + AC N +WLG+ ++ I ++ +PL DL RS+ +
Sbjct: 116 IMLIYRFGSSTLRKVNESLACPNARWLGIHPSELIAIGAKT-IPLTEADLVKLRSIEARG 174
Query: 309 ILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADY 354
+ E ++LS++ +AE+EA+ ++L + Y++ KI DY
Sbjct: 175 YVNEAISKQLSILRKG--KAEIEAVSSFSKNFLTETYLSYKIDGQDY 219
>gi|347523834|ref|YP_004781404.1| DNA topoisomerase [Pyrolobus fumarii 1A]
gi|343460716|gb|AEM39152.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrolobus fumarii 1A]
Length = 388
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 159/332 (47%), Gaps = 29/332 (8%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK-----LLCD-- 101
+ L RSL + AK F++ + + ++ L ++ T R+L+Y+ + D
Sbjct: 60 LLLGPEKLRRSLFNLHEAKKFMQTMLMAKIIYEALVNDEYPTIRDLYYRGKHTIVFVDDR 119
Query: 102 ----SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ Q + + I+D+ R + I++ +G V G + ++ N +VID S
Sbjct: 120 GRRIEENTWDEQKESDAVIRDIEVFTGMLREEMLILSKEKGKVVGNMRIRSGN-DVIDLS 178
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G ++I L+E LD+ DA +++V+EK A+FQ+L + + +IL+T+ G P
Sbjct: 179 KMGHGAWAIEPTPDLIEFLDV--DAEFVLVIEKDAVFQQLHRIGFWRKYRAILVTSAGQP 236
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
D ATR + RLN LP+ L D +P G I FK GSI + E+ R A ++LG
Sbjct: 237 DRATRRFVRRLNEEL-GLPVYILTDADPYGWYIYSVFKIGSITLSYESERLATPKARFLG 295
Query: 277 LRGDDV-----------QLIPEQSLLPLKPRDLQIARSLMSSEILQE-NYKEELSLMVHN 324
+ D+ + ++ K D++ A L + + Q +++E+ + +
Sbjct: 296 VSMTDIFGDERKKPYLTETERRNFIIKAKDADIKRAEELRNYKWFQTPQWRKEIDIFLRK 355
Query: 325 GQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ E+EAL G +L KYI +KI D+I
Sbjct: 356 KAKLEIEALAGKGLRFLAFKYIPEKIETGDFI 387
>gi|320034211|gb|EFW16156.1| meiosis-specific topoisomerase Spo11 [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 185/358 (51%), Gaps = 35/358 (9%)
Query: 1 VRARIEVSVINFLKILNSPD--PAISDLPLINRKSSNSRVSQ---GLLTDVSWIFLSHSF 55
V+ IE ++ + L L+ PD P+++ L +++++N +++ L D + S ++
Sbjct: 21 VKQFIESTLASVLDELSKPDGRPSVT-LKRRSKRANNCSLNEETGALQVDTNGREWSVTY 79
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
T ++A K F + +++ + + + ++R+++Y P YF SQ V+
Sbjct: 80 SWPGKTVTDAWK-FGVIMRILGHISEAIEGKFISSKRDIYYL----DPPYFGSQRLVDGY 134
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA-CGSSGYSISGDLSLLE 174
I D+ + R +L + A+++GL GR + + V++ C G I ++
Sbjct: 135 IDDIAYTVGVDRAALHVSAAAKGLTVGRYKINLQSGSVLNVGEHC--EGILIPRTHEIV- 191
Query: 175 KLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATRFLLHRLN-- 229
DL + R+I+++EK A+F RL T ++ ILIT KGYPD++TR L ++
Sbjct: 192 GFDL-SGVRWILIIEKEAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEW 250
Query: 230 RAFPD--LPILALVDWNPAGLAILCTFKFGSIGMGME-AYRYACNVKWLGLRGDDVQLIP 286
R P +PI LVD +P G+AI+ T+K+GSI E A V+WLGLR D IP
Sbjct: 251 RNSPARFIPIYVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTA-IP 309
Query: 287 -----EQSLLPLKPRDLQIARSLMSSEIL-----QENYKEELSLMVHNGQRAEVEALY 334
++ L+P+ RD A++++S ++ ++ ++ EL M+ +AE+E LY
Sbjct: 310 GNADVDRPLIPMTLRDRARAQAMLSHSVIFSDEREQEWRLELQRMLMVNAKAEIEVLY 367
>gi|426192133|gb|EKV42071.1| hypothetical protein AGABI2DRAFT_212660 [Agaricus bisporus var.
bisporus H97]
Length = 389
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 147/281 (52%), Gaps = 24/281 (8%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ +A+ ++++VM+ + + ++ +T+R+++Y + + F SQ V+ + D+ A
Sbjct: 40 AGSARPLAQLFRVMDLAHEAIVEDIPMTKRDIYY----NDVQLFKSQKTVDTLVDDLAAT 95
Query: 123 LHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
R SL I ASS+GL+ G L + + E + + ++ D+ L D
Sbjct: 96 FDLDRSSLNIRASSKGLICGSGLTIYLTSGETVRPTDTKATLIPAGEDIF---SFGLSED 152
Query: 182 ARYIIVVEKHAIFQRLTEDFVFN--QIPS--ILITAKGYPDIATRFLLHRLNRAFP-DLP 236
R+++++EK A+FQ L + N P +LIT KGYPDIATR L+ L P +P
Sbjct: 153 VRWVLIIEKEAVFQTLCNLEITNSHDFPGRGLLITGKGYPDIATRHLVKTLADCLPPSIP 212
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN--VKWLGLRGDDVQL--IPEQSLLP 292
I+ALVD +P GL IL +K+GS + E R A V W+G+ + I + LLP
Sbjct: 213 IMALVDGDPYGLDILSVYKYGSRALKHENERLAAGDRVVWIGIWASEFSSLGIDKDKLLP 272
Query: 293 LKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
+ D + A SL+ LQ ++EL ++ ++AE+E L
Sbjct: 273 ISKGDEKKANSLL----LQ---RKELMRLLFVRRKAEIEIL 306
>gi|452840859|gb|EME42796.1| hypothetical protein DOTSEDRAFT_131971 [Dothistroma septosporum
NZE10]
Length = 342
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%), Gaps = 37/288 (12%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F V +++E + L + +++R+++Y+ P F +Q V+R + D+ SR
Sbjct: 50 FAVVLRILELMHEALRNDVVMSKRDIYYR----DPALFGNQTYVDRYVDDIALTFGLSRA 105
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL-------EKLDLKTD 181
SL + A ++GLVAG + + GSS + + LL + +D+K
Sbjct: 106 SLNVCAVAKGLVAGAFTIYRKD---------GSSTIANNDREGLLVPSLRDIQAIDVKM- 155
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPD----- 234
+I+V+EK A F+ +T ++ I + I++T KGYPD++TR LLH L+ A P+
Sbjct: 156 VNWILVIEKEATFRSITAGPFWDTIATQGIVLTGKGYPDLSTRALLHFLSTASPENGFAS 215
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRG-----DDVQLIPEQ 288
P+ L D++P GL+IL T++ GS + E+ + ++WLGLR D Q
Sbjct: 216 PPVYGLADFDPDGLSILSTYRRGSKSLAHESEAHCIPQLQWLGLRSENLYMDQANTHASQ 275
Query: 289 SLLPLKPRDLQIARSLMSSEI---LQENYKEELSLMVHNGQRAEVEAL 333
LL L RD + A +++ + E +K EL M+ +AE++ L
Sbjct: 276 GLLKLTTRDRKKAVNMLVRNDDWEVPEEWKAELRTMLMLNTKAELQLL 323
>gi|407925927|gb|EKG18901.1| Spo11/DNA topoisomerase VI subunit A [Macrophomina phaseolina MS6]
Length = 458
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 69/307 (22%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F + +++E + L ++ +++RE++Y+ P FT+Q+ V+R I D+ R
Sbjct: 162 FTVLIRILEIVHEALITDRVISKREIYYR----HPALFTTQVIVDRYIDDIAYTFGTYRS 217
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD----------- 177
L + A+++GLV+G + +Q+ GD + +KLD
Sbjct: 218 LLNVCAAAKGLVSGPVSIQK-------------------GDNTAFQKLDDHAGHLIPNND 258
Query: 178 ----LKTDARYIIVVEKHAIFQRLTEDFVFNQI--PSILITAKGYPDIATRFLLHRLNRA 231
++T A++I+VVEK A+F+ ++ + + +++T KGYPD++TR L +L A
Sbjct: 259 GEGIIQTTAKWILVVEKEALFRSISASSSWEVLRHQGVMVTGKGYPDLSTRAFLRQLCAA 318
Query: 232 ----FPDLPILALVDWNPAGLAILCTFKFGSIGMGME--AYRYACNVKWLGLRGDDVQLI 285
P +PI ALVD++P GL+I+CT+K+GS + E A R +++WLG++ Q
Sbjct: 319 SVTGHPHIPIYALVDFDPDGLSIMCTYKYGSSALAHEGDAARLP-SMQWLGVKS--TQAF 375
Query: 286 P-------------EQSLLPLKPRDLQIARSLM------SSEILQENYKEELSLMVHNGQ 326
P Q LL L RD + A S++ ++I E EL +M+
Sbjct: 376 PPKSSGLTASSVHQNQGLLHLTHRDRKKAVSILCKACCCETDISHE-IARELQIMLMLNL 434
Query: 327 RAEVEAL 333
+AE E L
Sbjct: 435 KAETELL 441
>gi|270006719|gb|EFA03167.1| hypothetical protein TcasGA2_TC013087 [Tribolium castaneum]
Length = 936
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 156/294 (53%), Gaps = 17/294 (5%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
+ F R+ ++ + +L +++T+RE++Y++ T+Q QVNR + D+ L+
Sbjct: 655 RRFCRLVYMLGKVYNLLENNQKLTKREIYYQI----KHLVTNQEQVNRVVGDISQLVGVG 710
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
+ L I++ S GLV G L L + E+ +C+ + I DL E +++ + A +I+
Sbjct: 711 PWDLNIISHS-GLVYGNLRLFWASGEMTNCNTPATL---IPYDLD--EIIEIHSTANFIL 764
Query: 187 VVEKHAIFQRLTEDFVFNQI--PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
VVEK +IF +L E+ + N++ P I+IT KG PDI TR L +L+ LP+ LVD +
Sbjct: 765 VVEKESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRLFLKKLSTML-KLPVFVLVDPD 823
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARS 303
G+ I+ ++FG+I + + A N +WLG+ ++ Q + R+++
Sbjct: 824 LYGIRIMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIAKFGIQ-FQNITQREVKAINE 882
Query: 304 LMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+ ++ + K +EL+ ++H+G++ +E L + Y+ K+ D+I
Sbjct: 883 TLKYPYMEAHPKIADELNYLLHSGKKGSIEGLVKNNTFLSEAYLPVKLFNQDFI 936
>gi|308452846|ref|XP_003089203.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
gi|308241650|gb|EFO85602.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
Length = 458
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 147/301 (48%), Gaps = 31/301 (10%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S+ K R + + +L +K+ T+RELFY + + +Q ++ +I+ + L
Sbjct: 100 SHRKKKLDRDLHCLHQVYDLLENDKKSTKRELFY----EHKAIYEAQRNLDSSIRSICEL 155
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL------ 176
L+ SR +L ++A RG++ G + + VID I+G ++
Sbjct: 156 LNESRSNLNVLACGRGILRGAITFLVEDVGVIDARV---QDVLITGKINANNMFPDSLLF 212
Query: 177 -DLKTDARYIIVVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLN--RAF 232
D ++A +++VVEK FQ+L ++ P IL+T+KGYPDI+TR +L L+ R F
Sbjct: 213 SDQVSEAEFVLVVEKDTTFQKLIDEKFQIMFPRGILVTSKGYPDISTRNVLKMLSEKRKF 272
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY-RYACNVKWLGLRGDDVQ--LIPEQS 289
PI L D +P G+ I T+K+G+ E + +++W+GL D + I
Sbjct: 273 ---PIYGLFDADPHGIEIYLTYKYGAAKETAEGRGAFVSSIQWIGLFPTDFKRFFIDPSQ 329
Query: 290 LLPLKPRDL-----QIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKY 344
LPL D I RS+ E L EL M+ N + E+E++ G +Y+GKY
Sbjct: 330 CLPLLRSDFVKIENMIPRSIQLGECL---VTRELDWMIQNAFKLELESINMCGPEYMGKY 386
Query: 345 I 345
+
Sbjct: 387 L 387
>gi|367024897|ref|XP_003661733.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
gi|347009001|gb|AEO56488.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
Length = 443
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 9/219 (4%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K F +++++E + L K +T+R ++Y+ +PE F SQ V+ + ++ L
Sbjct: 108 KKFEALFRIIEMSHEALLSGKLITKRNIYYQ----NPELFKSQSAVDDMVDNLAFTLGVG 163
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R L IVA+++GL++G + L + + C + +G + ++L+ K++ R+++
Sbjct: 164 REDLNIVATAKGLISGPIDLILRDGSIHSCDSASDTGILLPS-VNLITKINFGL-IRWVL 221
Query: 187 VVEKHAIFQRLTE---DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
V+EK A F+ L IL+TAKGYPD+ATR L L+ P+L + ALVD+
Sbjct: 222 VIEKEATFRTLAAAKYSRTSRAGQGILLTAKGYPDLATRRFLFLLHSVRPELSLFALVDF 281
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
+P G+AI+ T+K GS + E ++WLGL DV
Sbjct: 282 DPHGIAIMRTYKHGSQRLEHEQNAAVPCLQWLGLHSGDV 320
>gi|303319823|ref|XP_003069911.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109597|gb|EER27766.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 370
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 38/353 (10%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQ-GLLTDVSWIFLSHSFCTRS 59
V+ IE ++ + L L+ PD P + K + R + L + + + + S
Sbjct: 21 VKQFIESTLASVLDELSKPD----GRPSVTLKRRSKRANNCSLNEETGALQVDTNGREWS 76
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
+T S K WK I + K ++ + Y L P YF SQ V+ I D+
Sbjct: 77 VTYSWPGKTVTDAWKFGHISEAI--EGKFISSKRDIYYL---DPPYFGSQRLVDGYIDDI 131
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
+ R +L + A+++GL GR + + V++ + + DLS +
Sbjct: 132 AYTVGVDRAALHVSAAAKGLTVGRYKINLQSGSVLNGILIPRTHEIVGFDLSGV------ 185
Query: 180 TDARYIIVVEKHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATRFLLHRLN--RAFPD 234
R+I+++EK A+F L T ++ ILIT KGYPD++TR L ++ R P
Sbjct: 186 ---RWILIIEKEAVFHCLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEWRNSPA 242
Query: 235 --LPILALVDWNPAGLAILCTFKFGSIGMGME-AYRYACNVKWLGLRGDDVQLIP----- 286
+PI LVD +P G+AI+ T+K+GSI E A V+WLGLR D IP
Sbjct: 243 RFIPIYVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTA-IPGNADV 301
Query: 287 EQSLLPLKPRDLQIARSLMSSEIL-----QENYKEELSLMVHNGQRAEVEALY 334
++ L+P+ RD A++++S ++ ++ ++ EL M+ +AE+E LY
Sbjct: 302 DRPLIPMTLRDRARAQAMLSHSVIFSDEREQEWRLELQRMLMVNAKAEIEVLY 354
>gi|269986172|gb|EEZ92484.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 367
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 159/322 (49%), Gaps = 15/322 (4%)
Query: 44 TDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP 103
T+ I L R + F++ + +++ +K + R FY++ P
Sbjct: 50 TESRMITLGSGLSRRYFLNVGHVRKFIQTMAMAAVSRELIKNDKHTSLRSAFYQVRRTIP 109
Query: 104 ----EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSAC 159
+ Q++ N+ I+D+ + +R L I A+ G VAG + + E ++ID S
Sbjct: 110 GTKIDVVDDQIETNKAIEDLELITDLTREQLNINANKNGAVAGEVTV-EDRGDIIDWSKM 168
Query: 160 GSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDI 219
GS G+++ ++ + + K DA+++I +EK I+ RL ED + ++ ++I ++G
Sbjct: 169 GSGGWAVPSNVEDI--IFKKVDAKFVIYMEKATIWDRLNEDKAWKKLHCVIIASQGQATR 226
Query: 220 ATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLR 278
R LL RL+R +LP+ L D + G+ I KFGSI + + + + K++GL
Sbjct: 227 GIRRLLQRLSREH-NLPVYVLTDGDIWGVYIYSAIKFGSIALAHVSDKLSLPEAKFMGLT 285
Query: 279 GDDVQLIPEQSLLPLKPRDLQIAR--SLMSSEILQENYK--EELSLMVHNGQRAEVEALY 334
+D+ + L +K +D+ IAR + + E + N K EELS M G + E++A
Sbjct: 286 MEDIDKYELRRHL-IKFKDVDIARIKQIKNYEWFKNNKKWMEELSKMEKLGAKVELDAFT 344
Query: 335 FHGYDYLGK-YIAKKIVQADYI 355
G ++ + Y+ +K+ D++
Sbjct: 345 AKGLSFMTETYLPEKLKDKDFL 366
>gi|41615325|ref|NP_963823.1| DNA topoisomerase VI subunit A [Nanoarchaeum equitans Kin4-M]
gi|40069049|gb|AAR39384.1| NEQ542 [Nanoarchaeum equitans Kin4-M]
Length = 359
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 167/351 (47%), Gaps = 18/351 (5%)
Query: 14 KILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVW 73
+ L + DP I L N K+ + ++ L R + F +
Sbjct: 17 EFLKNGDPRIEFLTRGNIKTVEYDEEKDIIK------LKEKQSVRRFFDVGETRRFTQTL 70
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSP----EYFTSQLQVNRTIQDVIALLHCSRFS 129
V +++ K + RE++Y+L P F Q + + I+D+ L R
Sbjct: 71 LVAALAKELVESNKHASLREVYYQLKHTIPYINENTFDEQSESDSVIEDLERALRAIREQ 130
Query: 130 LGIVASSRGLVAGRLMLQEPNQ-EVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
GIVA +G + G + L++ N+ + +CS G G+ I + ++ +D+ D Y++VV
Sbjct: 131 FGIVADRKGYLYGDITLKDRNRGDEWNCSKLGLGGWGIPSTIEEIDIVDVNAD--YVLVV 188
Query: 189 EKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGL 248
EK A+F+RL E+ + ++LI KG P TR L+ +L R LP+ D +P G
Sbjct: 189 EKDAMFERLIEERFPEKNRALLIATKGQPSRGTRRLIRKL-RYEVGLPVYVFTDGDPWGF 247
Query: 249 AILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV-QLIPEQSLLPLKPRDLQIARSLMS 306
I K GS+ + M + + A + K++GL DDV + + + LKP D++ + LM
Sbjct: 248 YIYSVIKRGSMNLAMFSEQLATPDAKFIGLTIDDVIKYDLKDVAIQLKPIDVKRVKELME 307
Query: 307 SEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ + ++ + + M+ +AE +AL H +++ KY+ +KI + +++
Sbjct: 308 YPWFKNKEWQRQFNKMLKLNIKAEQDALAKHSLEFVANKYLPEKIEKGEFL 358
>gi|378728531|gb|EHY54990.1| meiotic recombination protein SPO11 [Exophiala dermatitidis
NIH/UT8656]
Length = 386
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 121/250 (48%), Gaps = 30/250 (12%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
+T+R+++Y+ P F Q V+R + D+ +R L + AS +GLVAG
Sbjct: 120 ITKRDIYYR----DPMLFKQQETVDRYVDDIAHTCQVTRRDLNVCASPKGLVAG------ 169
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-- 206
GS G + + +I+V+EK A F L E F+Q
Sbjct: 170 --------LGDGSGGQVPTHIPDHRNMFSEASHIAWILVIEKEATFNTLVEK-AFHQHPV 220
Query: 207 --PSILITAKGYPDIATRFLLHRL-NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
P +L+TAKGYPD+ATR L L + A + I L DW+P G+ IL + +GS +
Sbjct: 221 LGPGLLVTAKGYPDLATRHFLRNLADHARTPIQIFGLFDWDPDGIQILKCYLYGSKRLAQ 280
Query: 264 EAYRYACNVKWLGLRGDDVQLI--PEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLM 321
E +KW+G+R D+ + Q LPL RD +ARS+++S E +++EL +
Sbjct: 281 EHCCILPEMKWIGIRAHDIHRLDGATQESLPLSMRDRALARSMLAS----EEWRDELGEI 336
Query: 322 VHNGQRAEVE 331
+ Q A VE
Sbjct: 337 LPGLQEATVE 346
>gi|124027834|ref|YP_001013154.1| DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM 5456]
gi|166229996|sp|A2BLE8.1|TOP6A_HYPBU RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|123978528|gb|ABM80809.1| Type II DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM
5456]
Length = 387
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 160/332 (48%), Gaps = 29/332 (8%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSP- 103
+ L RS + +K F++ + ++ L + + T R+L+Y+ ++ P
Sbjct: 59 LLLGPEKLKRSFFDLHESKKFMQTLLMARIIYEALERNEYPTIRDLYYRGKHTIVYREPG 118
Query: 104 ------EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ Q + + I+D+ R + I++ +G V G + ++ ++ID S
Sbjct: 119 GRRHEENTWDEQRESDAVIRDIEVFTGLLREEMLILSKEKGKVVGNMRIR-SGGDIIDLS 177
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G Y+I L+E +D+ DA Y++VVEK A+FQ+L + + +ILIT+ G P
Sbjct: 178 KMGHGAYAIEPTPDLIEFIDV--DAEYVLVVEKDAVFQQLHRIGFWKKHRAILITSAGQP 235
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
D ATR + RLN LP+ L D +P G I FK GSI + E+ R A N +++G
Sbjct: 236 DRATRRFVRRLNEEL-GLPVYILTDADPYGWYIYSVFKIGSITLSYESERLATPNARFIG 294
Query: 277 LRGDDV-------QLIPEQS----LLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHN 324
+ D+ + EQ ++ K D++ A L + + Q + ++ E+ + +
Sbjct: 295 VSMTDIFGYKSKKPYLTEQERRNFIIKAKEADIKRAYELKNYKWFQTKKWQIEIDIFLEK 354
Query: 325 GQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
+ E+EA+ G +L KY+ +KI D+I
Sbjct: 355 KAKLEIEAMTSKGLRFLADKYLPEKIETGDWI 386
>gi|453083573|gb|EMF11618.1| DNA topoisomerase IV, alpha subunit [Mycosphaerella populorum
SO2202]
Length = 341
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 25/289 (8%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
++ A F V +++E + L + +++R+++Y+ P F SQ V+R + D+
Sbjct: 42 ADEAWRFSVVLRLLELIHEALRNDVVISKRDIYYR----DPALFGSQTTVDRYVDDIAYT 97
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
L +R L + A+++GL+AG + + D S G + +L + DLK
Sbjct: 98 LGVTRSMLNVCAAAKGLIAGAITFLRNDGSTTDAS-IDPEGILVP-NLKEVLSADLKA-V 154
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQI--PSILITAKGYPDIATRFLLH-----RLNRAFPDL 235
++++V+EK A F+ + ++ I ++IT KGYPD+ATR LL F
Sbjct: 155 KWVLVIEKEATFRSIAGSAFWDTIIREGVIITGKGYPDLATRALLRYCSHPSAQNGFASP 214
Query: 236 PILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLR-----GDDVQLIPEQS 289
P+ L D++P G+AIL T+K GS + E+ + +KWLGLR D+ Q
Sbjct: 215 PVYGLADFDPDGIAILSTYKRGSKKLAHESKEHVVPQLKWLGLRSEHLHADEFDTHAAQG 274
Query: 290 LLPLKPRDLQIARSLMSSEILQEN-----YKEELSLMVHNGQRAEVEAL 333
L L RD A ++ EI ++ + EL M+ +AE++ L
Sbjct: 275 RLTLSKRDRSKATMMIDREIDIDDGDALMERRELQTMLMLNTKAELQLL 323
>gi|325093817|gb|EGC47127.1| meiotic recombination protein spo11 [Ajellomyces capsulatus H88]
Length = 376
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 167/334 (50%), Gaps = 37/334 (11%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA--FVRVWKVMETCFQILSQE 86
+ R+S++S S T + CT S A +A F + +++ + + +
Sbjct: 34 LKRRSNHSHFSLNPETGALQRDTTEPSCTYSWPGKTAQEAWRFAVLLRILGHISEAIRGD 93
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML 146
++R+++Y P YF SQ V+R I D+ + R +L + A+++G+V G +
Sbjct: 94 FISSKRDIYYL----DPVYFGSQSVVDRCIDDIACTIGVDRTALHVAAAAKGVVVGTFNV 149
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQ 205
+ +ID A + G + + ++K+D T R+I+V+EK A F RL T ++
Sbjct: 150 TLNDDSMIDV-AVHAEGMLVP-RVETVKKIDTST-IRWILVIEKEATFHRLATVNYHTTS 206
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDL---------PILALVDWNPAGLAILCTF 254
ILIT KGYPDI+TR LH L+R P PI LVD +P G+AI+ T+
Sbjct: 207 AAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIFMLVDGDPDGMAIMSTY 266
Query: 255 KFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP-------EQSLLPLKPRDLQIARSLMS 306
K+GS + A NV+WLGL+ +L+P + +L+PL RD + A+ ++
Sbjct: 267 KYGSRAQAHDNTNLAVHNVQWLGLQAS--ELVPSSLEIQGDDALIPLTSRDRKKAQDMLG 324
Query: 307 -SEILQEN-----YKEELSLMVHNGQRAEVEALY 334
S + E+ ++ EL M+ +AE+E LY
Sbjct: 325 RSPVFAEDGPEPAWRRELQHMLMTNVKAEIEMLY 358
>gi|409075163|gb|EKM75546.1| hypothetical protein AGABI1DRAFT_79675 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 153/317 (48%), Gaps = 46/317 (14%)
Query: 56 CTRSLTK-----SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
CT++LT + +A+ ++++VM+ + + ++ T+R+++Y + + F SQ
Sbjct: 12 CTKTLTYPKKCLAGSARPLAQLFRVMDLAHEAIIEDIPATKRDIYY----NDVQLFKSQK 67
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGD 169
V+ + D+ A R SL I ASS+GL+ G L + + E + + ++ D
Sbjct: 68 TVDTLVDDLAATFDLDRSSLNIRASSKGLICGSGLTIYLTSGETVRPTDTKATLIPAGED 127
Query: 170 LSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFN--QIPS--ILITAKGYPDIATRFLL 225
+S L D +++++EK A+FQ L+ + N P +LIT KGYPDIATR L+
Sbjct: 128 IS---SFGLSEDVCWVLIIEKEAVFQTLSNLEITNSHDFPGRGLLITGKGYPDIATRHLV 184
Query: 226 HRLNRAFPD-LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN--VKWLGLRGDDV 282
L P +PI+ALVD +P GL IL +++GS + E R A V W+G+ +
Sbjct: 185 KTLADCLPPRIPIMALVDGDPYGLDILSVYRYGSRALKHENERLAAGDRVVWIGIWASEF 244
Query: 283 QL--IPEQSLLPLKPRDLQIARSLMSS------------------------EILQENYKE 316
I + LLP+ D + A + E+L +K+
Sbjct: 245 SSLGIDKDKLLPISKGDEKKASCFATDLLARVTEAVTWRPLKAFAMLNRPKEMLPTKWKK 304
Query: 317 ELSLMVHNGQRAEVEAL 333
EL ++ ++AE+E L
Sbjct: 305 ELMRLLFIRRKAEIEIL 321
>gi|328769561|gb|EGF79605.1| hypothetical protein BATDEDRAFT_26068 [Batrachochytrium
dendrobatidis JAM81]
Length = 423
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 41/303 (13%)
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
+ F + +++ +L + R T+R+++Y+ + F +Q QV+ ++D+
Sbjct: 114 SISTFDAIVSILKCIHSLLFTQSRCTKRDIYYRNI----HQFRTQKQVDEIVEDLACSFG 169
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
SR L IVA+S+G+V GRL + +++DC + +SG I +++ +
Sbjct: 170 ISRDQLMIVAASKGVVYGRLWIHTSKGDILDCCSNTTSGTLIPNADTII-GFTVGDGVTT 228
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPS-ILITAKGYPDIATRFLL-----HRLNRAFP----- 233
++VVEK A+F + + ++ P ILIT +G+PD+ATR L+ R+ R P
Sbjct: 229 VLVVEKDAVFFSMLQYGFWHTHPHIILITGRGFPDMATRRLVCMLSQSRMYRINPRTMSD 288
Query: 234 ----------------------DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN 271
DL +L LVD +P+G I CT+KFGS M +
Sbjct: 289 FEVEFGRSTEIELGQVLTTTESDLMVLVLVDGDPSGFEIYCTYKFGSKSMAYNTLLACPS 348
Query: 272 VKWLGLRGDDVQL-IPEQSLLPLKPRD-LQIARSLMSSEILQ-ENYKEELSLMVHNGQRA 328
W+G+ L I SL+PL P D ++ R L + I + Y+ +LS MV +
Sbjct: 349 SIWVGIHPTSWMLTIDADSLIPLTPHDRCKVYRLLDRNHIRSCKEYQRQLSRMVFMNCKC 408
Query: 329 EVE 331
E++
Sbjct: 409 EIQ 411
>gi|357494925|ref|XP_003617751.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
gi|355519086|gb|AET00710.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
Length = 439
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 142/323 (43%), Gaps = 60/323 (18%)
Query: 80 FQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL 139
F++ + K ++R+++Y P F Q V+ I D+ + CSR +L +V++ GL
Sbjct: 118 FKLGFENKHSSKRDIYYM----HPSVFLDQSVVDHAINDICVRMQCSRHNLNVVSAGNGL 173
Query: 140 VAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTE 199
V G + E +++ DC ++ + + + E D+ + A YI+VVEK ++F+ L
Sbjct: 174 VMGWIRFVE-GKKIFDCINSPNTAHPTP--VYVEEIKDIVSMAHYILVVEKESVFRILAN 230
Query: 200 DFVFNQ------------------------IPSILITAKGYPDIATR------------- 222
D N I SI +GYPDI TR
Sbjct: 231 DHFCNANHCIVISVSNFMKTLASFDSILLCINSIFSKGRGYPDIPTRRCEKSRPLSLDIM 290
Query: 223 ------FLLHRLNRAFPD---LPILALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNV 272
+R R D +P LVD +P G IL T++FGS+ M + + +
Sbjct: 291 LPILCILYFNRFLRLLVDNLYIPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEI 350
Query: 273 KWLGL--RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKE---ELSLMVHNGQR 327
WLG D +P+Q LLPL D + ++++ LQ E EL +M+ G +
Sbjct: 351 HWLGAFPSDSDRYFVPKQCLLPLTVEDKRKIKAMLLRCYLQREVPEWRLELRMMLQKGVK 410
Query: 328 AEVEALYFHGYDYLGK-YIAKKI 349
E+EAL H +L + YI KI
Sbjct: 411 FEIEALSVHTLSFLTESYIPSKI 433
>gi|86159261|ref|YP_466046.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775772|gb|ABC82609.1| DNA topoisomerase, type IIB [Anaeromyxobacter dehalogenans 2CP-C]
Length = 367
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 17/302 (5%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFY----KLLCDSPEYFTSQLQVNRTIQDVIA 121
AK F++ + V E C +++ K + R+L+Y L F Q + + I+D+
Sbjct: 70 AKKFMQTFLVSEACKELIDAGKTTSIRDLYYMTKHALGETRQNTFEEQEESDPIIEDLEV 129
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL--- 178
+ R L + AS RG + G L +++ + ID GS G+S+ S++E+ +
Sbjct: 130 AIDALREELHLFASGRGSMVGPLSIRDAG-DAIDLRRMGSGGWSVP---SIVEEHVVQFG 185
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
K++ARY++++EK A+++R ED + + I++T G P R ++ RL+ LP+
Sbjct: 186 KSEARYVLLIEKDAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSEL-GLPVY 244
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKP 295
LVD +P G I K GSI + E+ R A +++GL D +P + +
Sbjct: 245 VLVDNDPWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMND 304
Query: 296 RDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQAD 353
+D A+ +++ ++ ++ E+ MV +G++ E+EAL G ++ +Y+ KK+ D
Sbjct: 305 QDDARAKQMLAYPWFKDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPKKLRDRD 364
Query: 354 YI 355
++
Sbjct: 365 WL 366
>gi|443920159|gb|ELU40140.1| topoisomerase acting in meiosis [Rhizoctonia solani AG-1 IA]
Length = 472
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
KV E L + T+R++FY + E F Q V+ + D+ A L +R LGI
Sbjct: 143 KVAELSHLALKDDVPTTKRDIFYSDV----ELFGKQ-SVSDLVDDLAATLGLTRGDLGIR 197
Query: 134 ASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
A+ +GL G L L EVI + + D+ +++ D ++++VEK A
Sbjct: 198 AALKGLFCGSALTLTTSKGEVIRGMDFEETLIPVGEDIV---NVNIDEDLAWVLIVEKEA 254
Query: 193 IFQRLTEDFVFNQIPSI----LITAKGYPDIATRFLLHRLNRAFPD-----LPILALVDW 243
IFQ L + SI +IT KGYPD+ATR L+ + P+ +PIL LVD
Sbjct: 255 IFQTLCALGFASAHKSIGRGVIITGKGYPDLATRQLVSVFSSELPEWSDYSIPILCLVDA 314
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL------IPEQSLLPLKPRD 297
+P G+ IL +KFGS + E A V+W+G++ V IP +L D
Sbjct: 315 DPHGMDILSVYKFGSKTLVHEDVA-AERVQWIGVKRLTVLTWRNRLGIPSLEMLKTTSAD 373
Query: 298 LQIARSLMSSEILQENY----KEELSLMVHNGQRAEVEALYFHGYDYLG--KYIAKKIVQ 351
++ A +++ S+ L + +EEL M+ G +AE+E + G L KY+ KI++
Sbjct: 374 IRKAENMLRSQTLPSEWVYVPREELEQMLQTGTKAEIEVISGRGEGALALVKYVCGKILE 433
Query: 352 A 352
A
Sbjct: 434 A 434
>gi|87306802|ref|ZP_01088948.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
gi|87290175|gb|EAQ82063.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
Length = 389
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 19/304 (6%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY----KLLCDSPEYF 106
+ + R L N AK++++ C +++ K + R L+Y + E F
Sbjct: 76 MGKNTTARQLFNLNQAKSYMQTMLAAAGCKRLVESGKTTSIRGLYYLMKHTIAGTKEETF 135
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
+ Q + + I+D+ LL R L + A RG + G ++L + + IDCS GS GY I
Sbjct: 136 SDQAESDPIIEDLEVLLESLREELHLYAQQRGSMVGNIILNDKG-DTIDCSRMGSGGYGI 194
Query: 167 SGDLSLLEKLDLK---TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRF 223
S++E ++ A +++ VEK ++QR ED + + IL G P R
Sbjct: 195 P---SIVEADVIQFRECGADFVLHVEKDTVWQRFNEDKFWKKHNCILTHGSGQPPRGVRR 251
Query: 224 LLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV 282
LLHRL+ LPI + D +P G I K GSI + E+ R A K+LGLR D
Sbjct: 252 LLHRLHNELK-LPIYCVFDNDPWGYYIYSVIKQGSINLAYESKRMAVPEAKFLGLRAIDY 310
Query: 283 Q---LIPEQSLLPLKPRDLQIARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHG 337
+ L P + L D + A+ + ++ +++E+ ++ NG + EVEAL G
Sbjct: 311 ERCNLNPSVQ-IALNDTDRKRAKQIAKYPWFEQKKTWQKEIQKLLDNGFKLEVEALISQG 369
Query: 338 YDYL 341
Y+
Sbjct: 370 LSYV 373
>gi|261202302|ref|XP_002628365.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239590462|gb|EEQ73043.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239612183|gb|EEQ89170.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
ER-3]
Length = 395
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 44/272 (16%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG--RLMLQ 147
++R+++Y P YF SQ V+R I D+ + R +L + A+++GL+ G + L
Sbjct: 119 SKRDIYYL----DPVYFGSQSVVDRCIDDIACTIGVDRTALHVAAAAKGLLVGSFNITLN 174
Query: 148 EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQI 206
+ + ++ A + IS R+I+V+EK A F RL T ++
Sbjct: 175 DDSVGMLVPRAETVRNFDISA-------------VRWILVIEKEATFHRLATANYHKTSA 221
Query: 207 --PSILITAKGYPDIATRFLLHRLNRAFPDL---------PILALVDWNPAGLAILCTFK 255
P ILITAKGYPDI TR LH L+R + PI LVD +P G+AI+ T+K
Sbjct: 222 AGPGILITAKGYPDICTRAFLHLLSRTPGSVSGALRSNQPPIFMLVDSDPDGIAIMSTYK 281
Query: 256 FGSIGMGMEAYRYACN-VKWLGLRGDDVQLIPE------QSLLPLKPRDLQIARSLMS-S 307
+GS + N ++WLGL+ +V E L+PL RD + A+ ++S S
Sbjct: 282 YGSRAQAHDNPNLTVNKMQWLGLQSSEVASRIEVYQQDDDVLIPLTSRDRKKAQDMLSRS 341
Query: 308 EILQEN-----YKEELSLMVHNGQRAEVEALY 334
+ E+ ++ EL M+ + +AE+E LY
Sbjct: 342 PVFAEDGPEPAWRGELQHMLMSNVKAEIEILY 373
>gi|17542064|ref|NP_502081.1| Protein SPO-11 [Caenorhabditis elegans]
gi|3025217|sp|Q22236.1|SPO11_CAEEL RecName: Full=Meiotic recombination protein spo-11
gi|3879464|emb|CAA92974.1| Protein SPO-11 [Caenorhabditis elegans]
Length = 425
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 33/328 (10%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKR 88
I R+ N S L S SH FC R K R + + +L +KR
Sbjct: 58 IKRQMDNKEKSLTLRISTSK---SH-FCLRYTAKRKGK--LDRDLHCLHQVYDLLENDKR 111
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
T+REL+Y + + +Q ++ +I+ + LL+ SR +L I++ RG++ G +
Sbjct: 112 STKRELYY----EHKAVYGNQKYLDSSIKSICELLNESRANLNILSCGRGIIRGAITFLV 167
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP- 207
N VID + D L ++ ++A +I+VVEK FQ+L ++ P
Sbjct: 168 ENVGVIDARV----QEVLITDALLFS--NIISEADFILVVEKDTTFQKLMDENFQAMFPR 221
Query: 208 SILITAKGYPDIATRFLLHRLN--RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA 265
IL T+KGYPDIATR +L L+ R F PI L D +P G+ I T+K+G E
Sbjct: 222 GILATSKGYPDIATRNVLKMLSEKRKF---PIYGLFDADPHGIEIYLTYKYGPTKEFAEG 278
Query: 266 Y-RYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRDL-----QIARSLMSSEILQENYKEE 317
+ ++W+GL D I + LPL D I RS+ EI+ E
Sbjct: 279 RGAFVPTIEWIGLFPTDFHRFTIDQSQCLPLVRTDFVKIEKMIPRSIQLGEIV---VTRE 335
Query: 318 LSLMVHNGQRAEVEALYFHGYDYLGKYI 345
L M+ N + E+E++ G +Y+ +++
Sbjct: 336 LDWMIQNKFKMELESINMCGQEYMARFL 363
>gi|261402948|ref|YP_003247172.1| DNA topoisomerase VI subunit A [Methanocaldococcus vulcanius M7]
gi|261369941|gb|ACX72690.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus vulcanius
M7]
Length = 369
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 153/302 (50%), Gaps = 16/302 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K+ME Q+L + T RE +Y F Q N I+
Sbjct: 66 RTLT-VNQAKIFAQTTKMMEFAKQLLETDDFSTLREAYYVSKNWGEARFDEQQASNNVIE 124
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLL 173
D+ A L R LG + G V G L + E E V+DCS G+ Y+I D++
Sbjct: 125 DLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCSKLGTGAYNIPNDIT-- 182
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
KL+L+T+A +I+ +E +F RL + +++ IL++ KG P ATR + RL+ +
Sbjct: 183 -KLNLETNADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEY- 240
Query: 234 DLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLL 291
D+P+L D +P G L I T K GS A + + + + +G+ D+ + +
Sbjct: 241 DIPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPSARLIGVTPQDI-VDYDLPTH 299
Query: 292 PLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAK 347
PLK +D++ I L + + ++ +++ L M+ G RAE ++L +G Y + Y+ +
Sbjct: 300 PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPE 359
Query: 348 KI 349
KI
Sbjct: 360 KI 361
>gi|341880355|gb|EGT36290.1| hypothetical protein CAEBREN_32646 [Caenorhabditis brenneri]
Length = 426
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 35/294 (11%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K R + + +L +K+ T+RELFY + + Q ++ +I+ + LL S
Sbjct: 77 KKLDRDLHCLHQVYDLLENDKKSTKRELFY----EHKSIYEVQRNLDSSIKSICELLDES 132
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R +L I++ RG++ G + + VID + +LL +L ++A +I+
Sbjct: 133 RSNLNILSCGRGILRGAITFLVKDVGVIDARV-----QEVLITDALLHS-ELISEANFIL 186
Query: 187 VVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
VVEK FQ+L ++ P IL+T+KGYPDIATR ++ L+ PI L D +P
Sbjct: 187 VVEKDTTFQKLIDENFQQMFPRGILVTSKGYPDIATRNVIKMLSDK-KKFPIYGLFDADP 245
Query: 246 AGLAILCTFKFGSIGMGMEAY-RYACNVKWLGLRGDDVQ--LIPEQSLLPLK-------- 294
G+ I T+K+G+I E + +++W+GL D +I L LK
Sbjct: 246 HGIEIYLTYKYGAIKESAEGRGAFVPSIQWIGLFPTDYNRFIIDRTQCLKLKRTDIVKVE 305
Query: 295 ---PRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYI 345
PR +Q+ S+++ EL MV + + E+EA+ G +Y+ +Y+
Sbjct: 306 NLVPRSIQLGESIVT---------RELDWMVQHSFKMELEAINMCGPEYMSRYL 350
>gi|156552691|ref|XP_001599577.1| PREDICTED: meiotic recombination protein SPO11 [Nasonia
vitripennis]
Length = 381
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 25/275 (9%)
Query: 90 TQRELFYKLLCDSPEYFTS-QLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
T+R FY L + + F + QV I V +L C + +G +S+GLVAG L L
Sbjct: 121 TRRSFFYTLKNEDIKRFVKREQQVEWAINQVTMMLECGPWEIGFYTTSKGLVAGDLSLHL 180
Query: 149 P-----NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVF 203
N E +C +++ ++T A +++VVEK ++FQ+L D +
Sbjct: 181 NDGRCVNYEQRNCLPVPDVVANVTR---------IRTSADFVLVVEKDSVFQKLLHDELP 231
Query: 204 NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI-GMG 262
IL+T KGYPD+ TR L++ L+ LP+ ALVD NP G I+C ++FG++ G
Sbjct: 232 ASSSCILVTGKGYPDVPTRMLVNLLSEKVR-LPVYALVDANPYGFEIMCVYRFGTLNNSG 290
Query: 263 MEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSL 320
++WLG+ +D++L IP + L D + LM + ++ + L
Sbjct: 291 FRKQLLCSEMRWLGVHQEDLRLYNIPR---VRLTKGDYKKIGELMDRSYVDSDFSKHLME 347
Query: 321 MVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADY 354
M +AE+E++ +L YI +KI +Y
Sbjct: 348 MKQG--KAEIESVQQPKKRFLADFYIPEKIRLKNY 380
>gi|321264504|ref|XP_003196969.1| endodeoxyribonuclease [Cryptococcus gattii WM276]
gi|317463447|gb|ADV25182.1| Endodeoxyribonuclease, putative [Cryptococcus gattii WM276]
Length = 567
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 149/286 (52%), Gaps = 28/286 (9%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
+ N+ + +V T ++ + +T R+++Y+ + + F Q V++ + D++A
Sbjct: 250 RQNSIMRMACIMRVASTLYEAILDRNVITLRDVYYR----NKQLFERQPVVDKIVDDLVA 305
Query: 122 LLHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
R + AS++GL+A L++ + I SA ++ + + ++E
Sbjct: 306 TAELKRRDFYVCASAKGLIASSSLVIHYRTGDEIVLSATRANLVDPAEKIDVIEA---PN 362
Query: 181 DARYIIVVEKHAIFQRLTEDFV--FNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPI 237
++++VEK AIFQ L + + +I +LIT KG+PD+ATR +L + FP + I
Sbjct: 363 GLDWVLIVEKDAIFQSLCGAGLLQYERIGHGVLITGKGFPDLATRQILRLIVDTFPCVKI 422
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN---------VKWLGLRGDDVQL--IP 286
ALVD +P GL IL T+ +GS +A Y+ + V+WLGLR D I
Sbjct: 423 YALVDADPHGLKILSTYMYGS-----KANAYSSDYEDLPLRDRVQWLGLRASDWSDLGIN 477
Query: 287 EQSLLPLKPRDLQIARSLM-SSEILQENYKEELSLMVHNGQRAEVE 331
L+PL+ D+Q+A S++ + L + +K ELS M+H ++AE+E
Sbjct: 478 YDDLIPLEQSDIQLAMSMLRDHQTLPDEWKRELSHMLHLRRKAEIE 523
>gi|341880361|gb|EGT36296.1| hypothetical protein CAEBREN_28993 [Caenorhabditis brenneri]
Length = 429
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 35/294 (11%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K R + + +L +K+ T+RELFY + + Q ++ +I+ + LL +
Sbjct: 77 KKLDRDLHCLHQVYDLLENDKKSTKRELFY----EHKSIYEVQRNLDSSIKSICELLDEN 132
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R +L I++ RG++ G + + VID + +LL +L ++A +I+
Sbjct: 133 RSNLNILSCGRGILRGAITFLVKDVGVIDARV-----QEVLITDALLHS-ELISEANFIL 186
Query: 187 VVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
VVEK FQ+L ++ P IL+T+KGYPDIATR ++ L+ PI L D +P
Sbjct: 187 VVEKDTTFQKLIDENFQQMFPRGILVTSKGYPDIATRNVIKMLSDK-KKFPIYGLFDADP 245
Query: 246 AGLAILCTFKFGSIGMGMEAY-RYACNVKWLGLRGDDVQ--LIPEQSLLPLK-------- 294
G+ I T+K+G+I E + +++W+GL D +I + L LK
Sbjct: 246 HGIEIYLTYKYGAIKESAEGRGAFVPSIQWIGLFPTDYNRFIIDQTQCLKLKRTDIVKVE 305
Query: 295 ---PRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYI 345
PR +Q+ S+++ EL MV + + E+EA+ G +Y+ +Y+
Sbjct: 306 NLVPRSIQLGESIVT---------RELDWMVQHSFKMELEAINMCGPEYMSRYL 350
>gi|241679558|ref|XP_002412658.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
gi|215506460|gb|EEC15954.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
Length = 264
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 128/240 (53%), Gaps = 11/240 (4%)
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
AL+ R L ++A+S+GL +G + + + +D S + + G + ++++
Sbjct: 31 ALVLVPRRCLNVLATSKGLFSGDVRFTDGSGNFVDGSFKPTLVPTDVGGMR-----NIQS 85
Query: 181 DARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
A +I+V+EK A FQ+L D F+ + P ILIT KGYPD+ TR LL RL+ D+P+ A
Sbjct: 86 SATFILVIEKDATFQKLLNDGFLKSAGPCILITGKGYPDVNTRELLRRLHVEV-DIPVYA 144
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDL 298
LVD +P G+ ILC + +GS+ M E A ++WLG+ DV + PL D
Sbjct: 145 LVDADPYGIEILCVYAYGSLAMANETDSMAVPRIRWLGVHPSDVVTFELKDCPPLSYGDK 204
Query: 299 QIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
R+L++ + +KE++ L+ ++AE++ L +L YI KI + +I
Sbjct: 205 SKLRNLLARPYVDSKPAWKEQMVLLDGLQRKAEIQGLCSVDPTFLSDVYIPSKIKFSGWI 264
>gi|295666744|ref|XP_002793922.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226277575|gb|EEH33141.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 398
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 39/275 (14%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
++R+++Y P YF SQ V+R I D+ + R +L + A+++GL GR +
Sbjct: 115 SKRDIYYL----DPVYFGSQSVVDRCIDDIACTIGVDRSALHVAAAAKGLAVGRFNVTLN 170
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQI-- 206
+ ID G + + ++ +DL ++I+V+EK A F+RL T ++
Sbjct: 171 DNSTIDADLHAEVGMLVP-RVETVKNVDLSA-VQWILVIEKEATFRRLATANYHKTSAAG 228
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDLP------------ILALVDWNPAGLAILCTF 254
P I+IT KGYPD+ TR L L+ P LP I VD +P G+AI+ T+
Sbjct: 229 PGIMITGKGYPDLCTRAFLRLLSHTLP-LPSALGPSPSSPPPIYMFVDSDPDGMAIMSTY 287
Query: 255 KFGSIGMGMEAYRYA-CNVKWLGLRGDDVQLIPEQS--------LLPLKPRDLQIARSLM 305
K+GS E +++W GL+ +V +P++ L+PL RD + A+ ++
Sbjct: 288 KYGSKAQAHENNNLTVSDIQWFGLQSSEV--VPKRDAHTQDDDVLIPLTLRDRKKAQDML 345
Query: 306 S-SEILQEN-----YKEELSLMVHNGQRAEVEALY 334
+ + + E+ ++ EL M+ + +AE+E LY
Sbjct: 346 ARNPVFAEDGPEPAWRAELQHMLMSNVKAEIEVLY 380
>gi|424819557|ref|ZP_18244639.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|290559010|gb|EFD92390.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422588|gb|EGD71982.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 367
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 156/317 (49%), Gaps = 15/317 (4%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I L R + F + + +++ EK + R FY++ P +
Sbjct: 55 ITLGDEMSKRYFLNVGHVRKFTQTLAMAAVSRELIKSEKHTSLRSAFYQVRRTIPGTKID 114
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
Q + N+ I+D+ + +R L I A+ G VAG +++ E ++ID S GS G+
Sbjct: 115 IVDDQTETNKAIEDLELITDLTREQLNINANKNGAVAGEVVV-EDRGDIIDWSKMGSGGW 173
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ ++ L + K DA+++I +EK I+ RL ED + ++ ++I ++G R L
Sbjct: 174 AVPSNVEEL--IFKKVDAKFVIYMEKATIWDRLNEDKAWKKLHCVIIASQGQATRGIRRL 231
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
L RL+R +LP+ L D + G+ I KFGSI + + + + K++GL +D+
Sbjct: 232 LQRLSREH-NLPVYVLTDGDIWGIYIYSAIKFGSIALAHVSDKLSLPEAKFMGLTMEDID 290
Query: 284 LIPEQSLLPLKPRDLQIAR--SLMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYD 339
+ L +K +D+ IAR + + + + N K EEL+ M G + E++A G
Sbjct: 291 KYGLRRHL-IKFKDVDIARIKQIKNYDWFKNNKKWMEELNTMEKLGAKVELDAFTAKGLS 349
Query: 340 YLGK-YIAKKIVQADYI 355
++ + Y+ +K+ +++
Sbjct: 350 FMTETYLPEKLKDKNFL 366
>gi|289192630|ref|YP_003458571.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
gi|288939080|gb|ADC69835.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
Length = 369
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 16/302 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K++E Q+L + T RE +Y F Q N I+
Sbjct: 66 RTLT-VNQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFDDQQASNNVIE 124
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLL 173
D+ A L R LG + G V G L + E E V+DCS G+ Y+I D++
Sbjct: 125 DLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCSKLGTGAYNIPNDVT-- 182
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
KL+L+TDA +I+ +E +F RL + +++ IL++ KG P ATR + RL+
Sbjct: 183 -KLNLETDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEH- 240
Query: 234 DLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLL 291
DLP+L D +P G L I T K GS A + + + +G+ D+ + +
Sbjct: 241 DLPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDI-IDYDLPTH 299
Query: 292 PLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAK 347
PLK +D++ I L + + ++ +++ L M+ G RAE ++L +G Y + Y+ +
Sbjct: 300 PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPE 359
Query: 348 KI 349
KI
Sbjct: 360 KI 361
>gi|147921703|ref|YP_684477.1| DNA topoisomerase VI subunit A [Methanocella arvoryzae MRE50]
gi|110619873|emb|CAJ35151.1| type II DNA topoisomerase VI, subunit A [Methanocella arvoryzae
MRE50]
Length = 366
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 154/304 (50%), Gaps = 19/304 (6%)
Query: 66 AKAFVRVWKVMETCFQILSQEK-RVTQRELFYKLLCDSP----EYFTSQLQVNRTIQDVI 120
AK F++ + + +L Q+K ++ R+LFY L D P F Q + + I+DV
Sbjct: 67 AKKFLQTLLIAKQIKILLEQDKPALSIRQLFYTLKHDIPGAGENTFDVQDESDPLIEDVE 126
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI----SGDLSLLEKL 176
++ R L ++A+ G++AG +++++ +V+D + GS+G ++ D ++++
Sbjct: 127 LMVDALREELNLIATPNGVLAGPMIVEDKTGDVLDFTKMGSAGGAVPPIVEDDFFHIKEM 186
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
+ A YI+VVEK+A++ L ++ + + IL+T KG P A R LL R + D+P
Sbjct: 187 N----ADYILVVEKYAVWNLLNQEKFWKKNNCILLTGKGQPARAERRLLARFGEEY-DIP 241
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPL 293
+ D +P G I +K+GSI + + + AC K+LGL DV +P S + L
Sbjct: 242 VYVFTDMDPWGYYIYSVYKYGSINLAFFSEKAACPRAKYLGLSVKDVMNFDMPRSSWIKL 301
Query: 294 KPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQ 351
D + + +++Y ++EL+ + G + E +AL ++ Y+ KI
Sbjct: 302 NDEDHKRIAEISEYPWFKKDYWQKELTDLKKFGYKIEQDALVSKSIEFTANNYLPTKIEN 361
Query: 352 ADYI 355
D+
Sbjct: 362 KDFF 365
>gi|398393738|ref|XP_003850328.1| hypothetical protein MYCGRDRAFT_45713, partial [Zymoseptoria
tritici IPO323]
gi|339470206|gb|EGP85304.1| hypothetical protein MYCGRDRAFT_45713 [Zymoseptoria tritici IPO323]
Length = 272
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 30/262 (11%)
Query: 91 QRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
R++FY+ P F SQ V+R + D+ + +R +L + A ++G+VAG +
Sbjct: 3 HRDIFYQ----DPALFGSQPIVDRYVDDIAHTFNITRTALNVTAVAKGIVAGAATFCRRD 58
Query: 151 QEVIDCSACGSSGYSISGDLSLLEKLDLK-TDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
+IDC+A G I +L E L + ++I+V+EK A F+ + + S
Sbjct: 59 GSMIDCAA-DREGLLIP---NLKEILSINMASVKWILVIEKEATFRSIAASMFWETTASE 114
Query: 209 -ILITAKGYPDIATRFLLHRLNR-----AFPDLPILALVDWNPAGLAILCTFKFGSIGMG 262
I++TAKGYPD+A+R LL ++ F P+ L D++P G+AIL T+K GS +
Sbjct: 115 GIILTAKGYPDLASRALLRFVSHPSTKNGFASPPVFGLADFDPDGVAILSTYKHGSKALA 174
Query: 263 MEAYRYAC-NVKWLGLRGDDVQLIPE-----QSLLPLKPRDLQIARSLMSSEI-----LQ 311
E+ ++ ++WLGL+ +P Q +L L RD + AR+++ + L
Sbjct: 175 HESDGHSVPQLQWLGLKSSH---LPHDERNPQGVLKLTSRDRRKARAMLEQQHTPDVRLD 231
Query: 312 ENYKEELSLMVHNGQRAEVEAL 333
E ++ EL M+ +AE++ L
Sbjct: 232 EEWQSELRQMLMLNVKAELQIL 253
>gi|119498739|ref|XP_001266127.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
gi|119414291|gb|EAW24230.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
Length = 391
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 182/373 (48%), Gaps = 42/373 (11%)
Query: 5 IEVSVINFLKILNSPD--PAISDLPLINRKSSNSRVS-----QGLLTDVSWIFLSHSFCT 57
I+ ++I L L +PD P ++ + R+S S L T+ I S+S+
Sbjct: 31 IDNTLIEILDELRTPDGRPTLT----LKRRSRGVPFSINPENLALETEEKEILSSYSWPG 86
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+ ++ A +R V+ Q V++R+++Y P F SQ V+ I
Sbjct: 87 RNAYEAWKFTAIIRGISVIAEAIQ---AGLVVSKRDIYYS----DPACFGSQQIVDTIID 139
Query: 118 DVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD 177
D+ + R +L + A ++GLVAG L EV+D S+ + + +E +D
Sbjct: 140 DIAHTIGVDRAALNVEAVAKGLVAGYYRLMTKAGEVVDARL--STKDVLIPKMEDIEAID 197
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRLNRAFPD 234
++ ++++++EK A+++RL+ + + +L+T KGYPD++TR + RL
Sbjct: 198 -ASEVKWVLILEKEAVYRRLSRSSYHTRAAAGKGVLVTGKGYPDLSTRAFVRRLLDETRH 256
Query: 235 LP------ILALVDWNPAGLAILCTFKFGSIGMGMEAYRY-ACNVKWLGLRGDDV----Q 283
LP ALVD +P G+AI+ T+K+GS+ + + ++WLGLR DV
Sbjct: 257 LPAEESPRFYALVDSDPDGMAIMSTYKYGSMAHARDNEKLNVSKLRWLGLRTSDVIGGAD 316
Query: 284 LIPEQSLLPLKPRDLQIARSLMSSEIL------QENYKEELSLMVHNGQRAEVEALYFHG 337
+++ + L RD + A +++S+ + ++ ++ EL M+ +AE+E LY
Sbjct: 317 SFGDEAFIRLSLRDRKKAVAMLSNNPVWAEDGPEQEWRAELQQMLMLNLKAEIEILYDR- 375
Query: 338 YDYLGKYIAKKIV 350
+ L +I KK+
Sbjct: 376 QEGLEGWIDKKMT 388
>gi|305662509|ref|YP_003858797.1| DNA topoisomerase [Ignisphaera aggregans DSM 17230]
gi|304377078|gb|ADM26917.1| DNA topoisomerase (ATP-hydrolyzing) [Ignisphaera aggregans DSM
17230]
Length = 392
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 31/334 (9%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCD------- 101
+ L RS A+ F++ + ++ L + T R+L+Y+
Sbjct: 62 LLLGSGTFERSFLDVKEARKFMQTILMARIIYEALVNNEYPTIRDLYYRGKHSIRYRDHR 121
Query: 102 ----SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ Q + + ++D+ ++ R + I++ +G V G + ++ ++ID S
Sbjct: 122 NNIVEENTWDEQKESDAVLRDIEVYVNLLREEMLILSKEKGKVVGDMRIK-SGDDIIDLS 180
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G Y+I L+E +D+ +A +++VVEK A+FQ+L + + +IL+T+ G P
Sbjct: 181 KMGHGAYAIESTPDLIEFIDV--NAEFVLVVEKDAVFQQLHRAGFWKRYKAILVTSAGQP 238
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
D ATR + RLN LP+ L D +P G I F+ GSI + E+ R A + K+LG
Sbjct: 239 DRATRRFVRRLNEELK-LPVYILTDADPYGWYIYSVFRIGSITLSYESERLATPSAKFLG 297
Query: 277 LRGDDV-------------QLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMV 322
+ D+ + + ++ K D++ A+ L++ E + E + E+++ +
Sbjct: 298 VSMSDIFGDKTTGKKPYLTESERKNFIIKAKKTDIKRAQELLNYEWFKTEKWTREINMFL 357
Query: 323 HNGQRAEVEALYFHG-YDYLGKYIAKKIVQADYI 355
+ E+EAL G Y + YI KI D+I
Sbjct: 358 EKQSKLEIEALTGKGLYFLMDNYIPTKIETKDFI 391
>gi|195335887|ref|XP_002034594.1| GM21963 [Drosophila sechellia]
gi|195359309|ref|XP_002045345.1| GM13291 [Drosophila sechellia]
gi|194126564|gb|EDW48607.1| GM21963 [Drosophila sechellia]
gi|194129425|gb|EDW51468.1| GM13291 [Drosophila sechellia]
Length = 331
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 21/268 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLSTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETQAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FKRRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSQSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + ++ L D + L++ L+ ++EL ++
Sbjct: 243 SSQELTTPALRWIGLHPSEIPAL-GTGVVALVAGDNKKINDLLARHNLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I + +
Sbjct: 302 DVQLKAEIESVIDFLTDDYIPNKINRNL 329
>gi|330936289|ref|XP_003305327.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
gi|311317731|gb|EFQ86610.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
Length = 418
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 38/300 (12%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ A F + +++E L + +T+R+++Y+ P+ F Q V+R + D+
Sbjct: 124 AQEAWNFTVLLRILELIHGGLVDDTMMTKRDIYYR----HPDLFVKQSVVDRYVDDLACT 179
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY--SISGDLSLLEKLDLKT 180
+R L + A+++GLVAG L N I G I G+ + LDL +
Sbjct: 180 FGITRSQLNVTAAAKGLVAGNFRLDRENGHRIH-GMTEKEGMLVPIVGEN---DTLDL-S 234
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+ +++V+EK A F+ L + + S +++TAKGYPD+A+R L ++ P +P
Sbjct: 235 EVHWVLVIEKEATFRSLMASPQWGSLGSYGVILTAKGYPDVASRNFLRQMMDCAPHIPTY 294
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYA-------CNVKWLGLRG----------DD 281
A VD +P G+AIL T+K+GS + EA N++WLG++ DD
Sbjct: 295 AFVDLDPDGIAILSTYKYGSYRLAHEAVTPTDTPATSLPNIRWLGVKSHHMSRTPVGEDD 354
Query: 282 VQ--LIPE-QSLLPLKPRDLQIARSLM-----SSEILQENYKEELSLMVHNGQRAEVEAL 333
+ +P+ Q L+ L RD A ++ + + ++++++EL M+ +AE++ L
Sbjct: 355 TEPSTMPQLQGLMKLTARDRTKAAKMLEWNLCTEDGPEQDWRQELQKMLMFNIKAEMQIL 414
>gi|15668545|ref|NP_247343.1| DNA topoisomerase VI subunit A [Methanocaldococcus jannaschii DSM
2661]
gi|2495937|sp|Q57815.1|TOP6A_METJA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|1591076|gb|AAB98358.1| DNA topoisomerase VI, subunit A (top6A) [Methanocaldococcus
jannaschii DSM 2661]
Length = 369
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 151/302 (50%), Gaps = 16/302 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K++E Q+L + T RE +Y F Q N I+
Sbjct: 66 RTLT-VNQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFDDQQASNNVIE 124
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLL 173
D+ A L R LG + G V G L + E E V+DC+ G+ Y+I D++
Sbjct: 125 DLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGAYNIPNDVT-- 182
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
KL+L+TDA +I+ +E +F RL + +++ IL++ KG P ATR + RL+
Sbjct: 183 -KLNLETDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEH- 240
Query: 234 DLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLL 291
DLP+L D +P G L I T K GS A + + + +G+ D+ + +
Sbjct: 241 DLPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDI-IDYDLPTH 299
Query: 292 PLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAK 347
PLK +D++ I L + + ++ +++ L M+ G RAE ++L +G Y + Y+ +
Sbjct: 300 PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPE 359
Query: 348 KI 349
KI
Sbjct: 360 KI 361
>gi|302839577|ref|XP_002951345.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
gi|300263320|gb|EFJ47521.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
Length = 2553
Score = 107 bits (268), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 184 YIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF--PDLPILALV 241
Y++VVEK A+FQRL ED +++ +P +L+TA+G PD+ATR RL +F P L + LV
Sbjct: 132 YLLVVEKDAVFQRLAEDRIWDHLPCVLLTARGMPDLATRAFAARLAASFPAPRLQPVGLV 191
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
D+NPAG+ IL T+K+GS +G E + ++WLGLR + + L PL RD +
Sbjct: 192 DYNPAGVVILATYKYGSDRLGPEGRAHLLPGLRWLGLRSRQLADVEHHHLQPLSERDRVM 251
Query: 301 ARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQ 351
R L +E L M G E++ + GY GK A+ ++
Sbjct: 252 VRGL----------RERLGDM-EPGWAGELDVMEASGYKGGGKRDAQAKIK 291
>gi|126644799|ref|XP_001388116.1| topoisomerase VIA [Cryptosporidium parvum Iowa II]
gi|126117344|gb|EAZ51444.1| putative topoisomerase VIA [Cryptosporidium parvum Iowa II]
Length = 235
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 13/243 (5%)
Query: 118 DVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE-KL 176
D +L R S G+ S +G++ GR+ L D G SG +I+ + K
Sbjct: 1 DFSEILQIPRISFGLFPSPKGMIGGRIKLIYK-----DVEELGVSGATITDIFDPNDSKY 55
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
+KT+ +Y++V+EK +IFQ L E ++N+IP ++IT KG+PDI+TR L+ + +
Sbjct: 56 IIKTNVKYLLVIEKASIFQYLMEREIYNRIPCLVITGKGFPDISTRKLVSDI-ICKSGIT 114
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKP 295
L L D++P G+ I T+ GS E+ AC ++ +LG+ +D +LIP + + L
Sbjct: 115 ALYLGDFDPHGINIYLTYVRGS--SNFESQLAACPSIYYLGIHFEDTELIPSDTRVILSE 172
Query: 296 RDLQIARSLMSSEILQ--ENYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQA 352
+D +SL+ ++ N K + LM + + E+EA DYL Y+ KI++
Sbjct: 173 KDRSTLKSLIEDPAIKVSTNIKYKCKLMYEHNYKCELEAFQSISSDYLVNTYLPSKILRR 232
Query: 353 DYI 355
+I
Sbjct: 233 TWI 235
>gi|6716731|gb|AAF26720.1|AF214638_1 Spo11 [Coprinopsis cinerea]
Length = 369
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 15/279 (5%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ ++++ ++++V++ + L T+R+++YK + F Q V+ + D+ A
Sbjct: 61 TGSSRSMAQLFRVLDIMHEGLVTGTPTTKRDIYYKDVA----LFGRQSVVDTLVDDLAAT 116
Query: 123 LHCSRFSLGIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
R L + A+S+GLV G + + + EV+ + S D+ E + D
Sbjct: 117 WGTQRCDLNVRAASKGLVCGAGITINLYSGEVVQGNDTEPSNIPAGEDI---ESFGVDED 173
Query: 182 ARYIIVVEKHAIFQRLTEDFV---FNQIPSILITAKGYPDIATRFLLHRLNRAFPD-LPI 237
+++VVEK A+FQ L + V N I++T KGYPDIATR L+ L A P + +
Sbjct: 174 IAWVLVVEKEAVFQTLCQLGVTHGLNIGKGIMVTGKGYPDIATRHLVKSLGDALPKHVAL 233
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLK 294
ALVD +P G+ IL +++GS M E A +KWLGLR +V + LLPL
Sbjct: 234 AALVDCDPYGIDILSVYRYGSQSMRHENDTLATRRIKWLGLRISEVMEWDLDPSLLLPLT 293
Query: 295 PRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
D RS++ L +++EL G++AE+E L
Sbjct: 294 DYDENKIRSMLKRPHLPRRWRDELEATQARGRKAEIEVL 332
>gi|385805793|ref|YP_005842191.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
gi|383795656|gb|AFH42739.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
Length = 453
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 19/251 (7%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE 104
+ L TR N A+ F++ + ++ L + T R+++Y+ L SP+
Sbjct: 58 LLLGEQKLTRKFFDENEARRFMQTVLMARIIYEALVNNEYPTIRDIYYRGKHTLPHVSPK 117
Query: 105 -----YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSAC 159
+ Q + + ++DV L R + I++ +G V G + L+ N +VID S
Sbjct: 118 DKFKNTWEEQQESDAVLRDVEVLTGKLREEMLILSKEKGKVVGDMRLRSGN-DVIDLSKM 176
Query: 160 GSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDI 219
G Y+I L+E LD+ +A Y++VVEK A+FQ+L + +IL+T+ G PD
Sbjct: 177 GHGAYAIESTPDLIEFLDV--NAEYVLVVEKDAVFQQLHRFGYWKANKAILVTSAGQPDR 234
Query: 220 ATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLR 278
ATR + RLN LP+ L D +P G I FK GSI + E+ R A ++LG+
Sbjct: 235 ATRRFVRRLNEELK-LPVYILADSDPYGFYIYSVFKIGSITLSYESERLATPKARFLGVT 293
Query: 279 -----GDDVQL 284
GDDV L
Sbjct: 294 MSDVFGDDVPL 304
>gi|194881359|ref|XP_001974815.1| GG21975 [Drosophila erecta]
gi|190658002|gb|EDV55215.1| GG21975 [Drosophila erecta]
Length = 331
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 25/268 (9%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L+ S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLIRSQSRIAEARLDVCRMLNTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETQAEFLLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD +TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FKRRFILITGKGYPDCSTRRIVHRLAEE-NQLAAYILVDADPFGVEIMLVYRHGSQSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEALYFHGYDYL-GKYIAKKI 349
+AE+E++ D+L YI KI
Sbjct: 302 DVQLKAEIESV----IDFLTDDYIPNKI 325
>gi|6573667|pdb|1D3Y|A Chain A, Structure Of The Dna Topoisomerase Vi A Subunit
gi|6573668|pdb|1D3Y|B Chain B, Structure Of The Dna Topoisomerase Vi A Subunit
Length = 301
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 147/296 (49%), Gaps = 15/296 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K++E Q+L + T RE +Y F Q N I+D+ A L
Sbjct: 3 NQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFDDQQASNNVIEDLEAAL 62
Query: 124 HCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLLEKLDLK 179
R LG + G V G L + E E V+DC+ G+ Y+I D++ KL+L+
Sbjct: 63 GVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGAYNIPNDVT---KLNLE 119
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
TDA +I+ +E +F RL + +++ IL++ KG P ATR + RL+ DLP+L
Sbjct: 120 TDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEH-DLPVLV 178
Query: 240 LVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRD 297
D +P G L I T K GS A + + + +G+ D+ + + PLK +D
Sbjct: 179 FTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDI-IDYDLPTHPLKEQD 237
Query: 298 LQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
++ I L + + ++ +++ L M+ G RAE ++L +G Y + Y+ +KI
Sbjct: 238 IKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKI 293
>gi|389860616|ref|YP_006362856.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
gi|388525520|gb|AFK50718.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
Length = 430
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 20/248 (8%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY------------ 96
+ L RSL N A+ F++ + ++ L + T R+L+Y
Sbjct: 54 LLLGPDVLRRSLIDVNEARKFMQTLLMASIIYEALVNNEYPTIRDLYYRGKHSIGYRDVD 113
Query: 97 -KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVID 155
K++ ++ + Q + + I+D+ ++ R + I++ +G V G L+++ + + ID
Sbjct: 114 GKMVHENT--WDEQKESDSVIRDLEVFMNVLREEMLILSKEKGKVVGNLVIRSGD-DTID 170
Query: 156 CSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKG 215
S G YSI L+E D+ DA Y++VVEK A+FQ+L + + +IL+T+ G
Sbjct: 171 LSKMGHGAYSIEPTPDLVEFKDV--DAEYVLVVEKDAVFQQLHRYGFWRKYRAILVTSAG 228
Query: 216 YPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKW 274
PD ATR + RLN LP+ L D +P G I FK GSI + E+ R A N ++
Sbjct: 229 QPDRATRRFVRRLNEELK-LPVYVLTDSDPYGFYIYSVFKIGSITLSYESERLATPNARF 287
Query: 275 LGLRGDDV 282
+G+ DV
Sbjct: 288 IGVSMTDV 295
>gi|452981949|gb|EME81708.1| hypothetical protein MYCFIDRAFT_138655, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 361
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 37/289 (12%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQ-RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
F V ++ME + L + +++ R++FY+ P F SQ V+R + D+ R
Sbjct: 65 FAVVLRIMELLHEALRNDVVISKSRDMFYR----DPALFGSQKHVDRYVDDIAFTFGVPR 120
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK-TDARYII 186
+L + A+++GL AG L + VID S G I SL + L + + ++I+
Sbjct: 121 STLNVTAAAKGLFAGAFELCRRDGSVIDASE-DQEGTLIP---SLKDILSVSMSKVKWIL 176
Query: 187 VVEKHAIFQRLTEDFVFNQI--PSILITAKGYPDIATRFLLHRLNR-----AFPDLPILA 239
V+EK A F+ + +++ I I++T KGYPD+++R +L L+R F +
Sbjct: 177 VIEKEATFRSIAGSELWSTIIRQGIIMTGKGYPDLSSRAMLRFLSRPSLQNGFSSPLVYG 236
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPE-----QSLLPL 293
L D++P G+AILC +K GS + E+ +A ++WLGLR ++ L Q LL L
Sbjct: 237 LADFDPDGIAILCVYKHGSKALAHESRDHAAPEMEWLGLRSTNLSLAARDVRTSQGLLTL 296
Query: 294 KPRDLQIARSLMSSEILQENYK---------EELSLMVHNGQRAEVEAL 333
RD + A ++L +N+ +EL M+ +AE++ L
Sbjct: 297 SCRDRKKA-----VKMLDDNHSPGAECVETAKELQTMLMLNMKAELQFL 340
>gi|343473343|emb|CCD14743.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 495
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 24/209 (11%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE- 148
TQR+++Y+L +F Q VNR IQ ++ L R LG+V +RG V G L Q
Sbjct: 158 TQRDVYYQL----SRFFPDQGCVNRIIQQLVQQLAMPRQLLGVVPGTRGCVGGLLSFQGV 213
Query: 149 ------------PNQEVIDCSACGSSGYSISGDLSL---LEKLDLKTDARYIIVVEKHAI 193
P + C + + Y S D+ + +L RYI+VVEKH++
Sbjct: 214 DLQRYSSEGFPLPTLQEELCVSWSGAQYRESEDVGSSNGFKGFELHNSVRYILVVEKHSV 273
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF----PDLPILALVDWNPAGLA 249
F RL E+ VF ++P +L+T++G+P + LL + ++P++ALVD+NP+GL
Sbjct: 274 FFRLMEERVFERVPCVLLTSQGFPTASALSLLMNMQEMISAVGANVPLVALVDFNPSGLL 333
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLR 278
IL +K + M A +++WLGLR
Sbjct: 334 ILQQYKHNTGRMHESRCSAAHSLRWLGLR 362
>gi|197123330|ref|YP_002135281.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. K]
gi|196173179|gb|ACG74152.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. K]
Length = 367
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 155/302 (51%), Gaps = 17/302 (5%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFY----KLLCDSPEYFTSQLQVNRTIQDVIA 121
AK F++ + V + C +++ K + R+L+Y L F Q + + I+D+
Sbjct: 70 AKKFMQTFLVSDACKELIDAGKTTSIRDLYYMTKHALGETRQNTFEEQEESDPIIEDLEV 129
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL--- 178
+ R L + AS RG + G L +++ + ID GS G+S+ S++E+ +
Sbjct: 130 AIDALREELHLFASGRGSMVGPLSIRDAG-DAIDLRRMGSGGWSVP---SIVEEHVVQFG 185
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
K++A+Y++++EK A+++R ED + + I++T G P R ++ RL+ LP+
Sbjct: 186 KSEAKYVLLIEKDAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSEL-GLPVY 244
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKP 295
LVD +P G I K GSI + E+ R A +++GL D +P + +
Sbjct: 245 VLVDNDPWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMND 304
Query: 296 RDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQAD 353
+D A+ +++ ++ ++ E+ MV +G++ E+EAL G ++ +Y+ +K+ D
Sbjct: 305 QDDARAKQMLAYPWFKDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPRKLRDRD 364
Query: 354 YI 355
++
Sbjct: 365 WL 366
>gi|357494931|ref|XP_003617754.1| Meiotic recombination protein SPO11 [Medicago truncatula]
gi|355519089|gb|AET00713.1| Meiotic recombination protein SPO11 [Medicago truncatula]
Length = 452
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 154/371 (41%), Gaps = 88/371 (23%)
Query: 59 SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQD 118
+L K + + +V+ ++L + K ++R+++Y P F Q V+ I D
Sbjct: 84 TLCKETHVRRLDVMLRVLVIVQKLLQENKHSSKRDIYYM----HPSVFLDQSVVDHAIND 139
Query: 119 VIALLHCSRFSLGIVASSRG---------------------------------LVAGRLM 145
+ L+ CSR +L +V++ G LV G +
Sbjct: 140 ICVLMQCSRHNLNVVSAGNGYVMRSHSIMENALFYDVYICIKQIIATHTVNPWLVMGWIR 199
Query: 146 LQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
E +++ DC + + ++ L +D+ + ARYI+VVEK ++FQRL D
Sbjct: 200 FVE-GKKIFDCISSPDTCRELT--LLYFLPIDIVSAARYILVVEKESVFQRLANDQFCKS 256
Query: 206 IPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI------ 259
I+I+ +GYPDI TR L RL +P LVD +P G IL T++FGS+
Sbjct: 257 NHCIVISGRGYPDIPTRRFL-RLLVENLHIPAYCLVDCDPYGFDILTTYRFGSMVSICKF 315
Query: 260 --------------GMGMEAYRYACNVK---------------------WLGLRGDDVQ- 283
G E Y +K WLG D +
Sbjct: 316 ISSEVLQHAYLLLQGSQHEVYMIVEWIKSLSNDRQMAYDTKHLRVPEIHWLGAFPSDSER 375
Query: 284 -LIPEQSLLPLKPRDLQIARSLMSSEILQE---NYKEELSLMVHNGQRAEVEALYFHGYD 339
+P+Q LLPL D + +++ LQ ++ EL +M+ G + E+EAL H
Sbjct: 376 YFVPKQCLLPLTAEDKRKIEAMLLRCYLQREVPQWRLELKMMLQKGVKFEIEALSVHTLS 435
Query: 340 YLGK-YIAKKI 349
+L + YI KI
Sbjct: 436 FLTESYIPSKI 446
>gi|209945750|gb|ACI97106.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLSTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETQAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FKRRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSQSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQELTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHNLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|353235119|emb|CCA67136.1| related to Spo11-Coprinopsis cinerea [Piriformospora indica DSM
11827]
Length = 397
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 100/169 (59%), Gaps = 20/169 (11%)
Query: 184 YIIVVEKHAIFQRLTEDFVFNQI-----PSILITAKGYPDIATRFLLHRLNRAFPD-LPI 237
+++VVEK AIFQ L + F +I P I++T KGYPDIA+R LLH+L+ P+ +PI
Sbjct: 210 WVLVVEKEAIFQTLCQ-AEFTRINALRKPGIILTGKGYPDIASRQLLHKLSSGLPETVPI 268
Query: 238 LALVDWNPAGLAILCTFKFGSIGM-----GMEAYRYACNVKWLGLRGDDVQL--IPEQSL 290
ALVD +P G+ IL + FGSI M G+ A R V W+G+ +++ + +
Sbjct: 269 FALVDADPHGIEILSVYAFGSISMRHQNDGLTAER----VVWIGVMLTELERRGVAAGDM 324
Query: 291 LPLKPRDLQIARSLMSSE--ILQENYKEELSLMVHNGQRAEVEALYFHG 337
L L RD + SL+ E ++ + +K EL M+ GQ+AE+EA+Y G
Sbjct: 325 LGLNQRDRKKLESLLRREDRVMPQLWKNELRFMLERGQKAEIEAVYSGG 373
>gi|220918120|ref|YP_002493424.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955974|gb|ACL66358.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter dehalogenans
2CP-1]
Length = 367
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 155/302 (51%), Gaps = 17/302 (5%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFY----KLLCDSPEYFTSQLQVNRTIQDVIA 121
AK F++ + V + C +++ K + R+L+Y L F Q + + I+D+
Sbjct: 70 AKKFMQTFLVSDACKELIDAGKTTSIRDLYYMTKHALGETRQNTFEEQEESDPIIEDLEV 129
Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL--- 178
+ R L + AS RG + G L +++ + ID GS G+S+ S++E+ +
Sbjct: 130 AIDALREELHLFASGRGSMVGPLSIRDAG-DAIDLRRMGSGGWSVP---SIVEEHVVQFG 185
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
K++A+Y++++EK A+++R ED + + I++T G P R ++ RL+ LP+
Sbjct: 186 KSEAKYVLLIEKDAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSEL-GLPVY 244
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKP 295
LVD +P G I K GSI + E+ R A +++GL D +P + +
Sbjct: 245 VLVDNDPWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMND 304
Query: 296 RDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQAD 353
+D A+ +++ ++ ++ E+ MV +G++ E+EAL G ++ +Y+ +K+ D
Sbjct: 305 QDDARAKQMLAYPWFKDPKWQREIQEMVRSGEKYELEALSRRGISFVTEEYLPRKLRDRD 364
Query: 354 YI 355
++
Sbjct: 365 WL 366
>gi|45552753|ref|NP_995901.1| meiotic W68 [Drosophila melanogaster]
gi|3599483|gb|AAC61735.1| MEI-W68 [Drosophila melanogaster]
gi|7302468|gb|AAF57553.1| meiotic W68 [Drosophila melanogaster]
gi|289666809|gb|ADD16459.1| RT05903p [Drosophila melanogaster]
Length = 331
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 21/268 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I + +
Sbjct: 302 DVQLKAEIESVIDFLTDDYIPNKINRNL 329
>gi|324518385|gb|ADY47088.1| Meiotic recombination protein spo-11, partial [Ascaris suum]
Length = 388
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 145/280 (51%), Gaps = 19/280 (6%)
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
L++ +A++ F + + +Q+ T+R+LFY + + +Q ++ +I V
Sbjct: 65 LSRRHASR-FAFCARALAQIYQLRITTTFATKRDLFY----EQKSLYGTQRNLDISITAV 119
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
LL+ SR S ++++ RG+V G L++ + + +DCS S I DL +
Sbjct: 120 CRLLNASRSSQNVLSTGRGIVMGSLIV-DVDGRRLDCS----SAPVIISDL--MHHAHYV 172
Query: 180 TDARYIIVVEKHAIFQRL-TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+ AR+I+VVEK A FQ+L E F+ P+IL+T KGYPDI+TR L L + +P+
Sbjct: 173 SWARFILVVEKDATFQKLIQEGFLSRFSPAILVTGKGYPDISTRKFLKHLTSTY-QMPLF 231
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--QLIPEQSLLPLKP 295
L+D +P G+ I T+K+G E + N W+GL ++ +P + LPL+
Sbjct: 232 GLMDSDPHGIEIAMTYKYGGRMKSAEVGELSLPNFIWIGLSRSEICRYPVPREQYLPLQK 291
Query: 296 RDLQIARSLM--SSEILQENYKEELSLMVHNGQRAEVEAL 333
+ + L ++E+ EL+ + +G + E+EA+
Sbjct: 292 AEFKKTIKLCHRAAEMQDWTLLNELNCLRESGTKLELEAV 331
>gi|58270330|ref|XP_572321.1| endodeoxyribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117758|ref|XP_772513.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255127|gb|EAL17866.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228579|gb|AAW45014.1| endodeoxyribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 559
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 32/290 (11%)
Query: 72 VWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG 131
+ +V T ++ + +T R+++Y+ + F Q V++ + D++A R
Sbjct: 253 IMRVASTLYEAILDRNVITLRDVYYR----DKQLFERQPVVDKIVDDLVATAGLRRRDFY 308
Query: 132 IVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEK 190
+ AS++GL+A L+++ + I SA ++ + + ++E ++++VEK
Sbjct: 309 VCASAKGLIASSSLVIRYRTGDEIILSATRANLVDPAEKIDVIEA---PNGLDWVLIVEK 365
Query: 191 HAIFQRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
AIFQ L + +LIT KG+PD+ATR +L + FP + + ALVD +P G
Sbjct: 366 DAIFQSLCGAGILQDERIGHGVLITGKGFPDLATRQILRLIADTFPCVKMYALVDADPHG 425
Query: 248 LAILCTFKFGSIGMGMEAYRYACN---------VKWLGLRG---DDVQLIPEQSLLPLKP 295
L IL T+ +GS +A Y+ + V+WLGLR D+ I L+PL+
Sbjct: 426 LKILSTYMYGS-----KANAYSTDYGDLPLGDRVQWLGLRASHWSDLH-ISYDHLIPLEQ 479
Query: 296 RDLQIARSLM-SSEILQENYKEELSLMVHNGQRAEVEALYFHGY--DYLG 342
D+Q+A S++ + L +K ELS M+H ++AE+E + + D++G
Sbjct: 480 SDIQMAMSMLRDHQTLPVEWKRELSHMLHLHRKAEIEIIIASSWSSDHVG 529
>gi|302037397|ref|YP_003797719.1| DNA topoisomerase VI subunit A [Candidatus Nitrospira defluvii]
gi|300605461|emb|CBK41794.1| DNA topoisomerase VI, subunit A [Candidatus Nitrospira defluvii]
Length = 368
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 160/317 (50%), Gaps = 13/317 (4%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKL---LCDSPE- 104
I + +RS AK F++ V + ++ + + RE++Y+ + DS E
Sbjct: 54 IEMGEKKQSRSFFNVGMAKKFMQTMLVADALAELQQADLTTSLREIYYRTKHTIQDSHEN 113
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F +Q + + I+D+ L R L + A + G + G ++ + + + +DC+ G GY
Sbjct: 114 TFDTQDESDPIIEDLEVSLIALREELHVRAENSGSIVGPVVFGD-DGDRVDCAKLGKGGY 172
Query: 165 SISGDLSLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRF 223
S+ + E L+++ A ++++VEK + RL+ED + + +L+T G P R
Sbjct: 173 SVPS-IVEPEYLEIRRCTADFLLLVEKGTQWNRLSEDKFWRRYNCVLLTGNGQPPRGVRR 231
Query: 224 LLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV 282
L RL+ LP+ LVD +P G I K GSI + E+ R A K++GL D
Sbjct: 232 LARRLHEEH-KLPVYVLVDNDPWGYYIYSVVKQGSINLAFESQRMAIPKAKFIGLSSADP 290
Query: 283 QL--IPEQSLLPLKPRDLQIARSLMSSEILQE-NYKEELSLMVHNGQRAEVEALYFHGYD 339
+ +P + L +D+ A+ L++ + Q+ +++E+ M+ +G + E++AL +
Sbjct: 291 ERYELPRNVGIKLNEKDITRAKELLNYQWFQKPAWQQEIKRMLTSGLKYELDALANKDFQ 350
Query: 340 YL-GKYIAKKIVQADYI 355
YL KY+ +K+ + D++
Sbjct: 351 YLTKKYLPRKLKEKDWL 367
>gi|320101390|ref|YP_004176982.1| DNA topoisomerase [Desulfurococcus mucosus DSM 2162]
gi|319753742|gb|ADV65500.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus mucosus DSM
2162]
Length = 434
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 125/252 (49%), Gaps = 23/252 (9%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTS 108
+ L RS T N A+ F++ + + L + T R+L+Y+ S Y +S
Sbjct: 55 LLLGPETLKRSFTDVNEARKFMQTVLMASIIYDSLVNNEYPTIRDLYYRG-KHSISYRSS 113
Query: 109 ------------QLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDC 156
Q + + I+D+ L+ R L I++ +G V G L+++ + + ID
Sbjct: 114 SGREVHENTWDEQKESDSVIRDLEVFLNVLREELLILSKEKGKVVGNLVIRSGD-DTIDL 172
Query: 157 SACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGY 216
S G YSI L+E D+ DA Y++VVEK A+FQ+L + + +ILIT+ G
Sbjct: 173 SRMGHGAYSIEPTPDLIEFKDV--DAEYVLVVEKDAVFQQLHRYGFWKKNKAILITSAGQ 230
Query: 217 PDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWL 275
PD ATR L RL+ + +LP+ L D +P G I FK GSI + E+ R A K++
Sbjct: 231 PDRATRRFLRRLSDEY-NLPVYILTDSDPYGFYIYSVFKIGSITLSYESERLATPRAKFI 289
Query: 276 GLR-----GDDV 282
G+ GDDV
Sbjct: 290 GVMMTDVFGDDV 301
>gi|297527444|ref|YP_003669468.1| DNA topoisomerase [Staphylothermus hellenicus DSM 12710]
gi|297256360|gb|ADI32569.1| DNA topoisomerase (ATP-hydrolyzing) [Staphylothermus hellenicus DSM
12710]
Length = 445
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 130/271 (47%), Gaps = 19/271 (7%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKL---------- 98
+ L RS N A+ F++ + ++ L+ + T R+L+Y+
Sbjct: 62 LLLGPEMQRRSFLDVNEARKFMQTLLMASIIYEALANNEYPTIRDLYYRGKHTIIYRDLH 121
Query: 99 -LCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ Q + + I+D+ L R + I++ +G V G L+++ + ID S
Sbjct: 122 GRTHHENTWDEQRESDSVIRDLEVYLGVLREEMLILSKEKGKVVGNLVIKS-GDDTIDLS 180
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G YSI L+E D+ DA Y++VVEK A+FQ+L + + +ILIT+ G P
Sbjct: 181 KMGHGAYSIEPTPDLIEFKDV--DAEYVLVVEKDAVFQQLHRHGFWKKQKAILITSAGQP 238
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
D ATR + RLN LPI L D +P G I FK GSI + E+ R A + K++G
Sbjct: 239 DRATRRFVRRLNEELK-LPIYILADADPYGWYIYSVFKIGSITLSYESERLATPSAKFIG 297
Query: 277 LRGDDVQLIPEQSLLPLKPRDLQIARSLMSS 307
+ DV ++ K +DL+ +++ SS
Sbjct: 298 VTMTDVF---GDEIIRKKIKDLKSIKTISSS 325
>gi|195584887|ref|XP_002082235.1| GD11457 [Drosophila simulans]
gi|194194244|gb|EDX07820.1| GD11457 [Drosophila simulans]
Length = 331
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 13/264 (4%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLSTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N +V+D S G ++ D + +++++ T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYGGP-LTLPTDPAKIDRIE--TQAEFVLIVEKESVFESLLSRNVFGTFKRR 187
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M +
Sbjct: 188 FILITGKGYPDCCTRRIVHRLTEE-NQLEAYILVDADPFGVEIMLVYRHGSQSMSFSSQG 246
Query: 268 YAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 247 LTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHNLEPGVRQELRMLQDVQL 305
Query: 327 RAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I + +
Sbjct: 306 KAEIESVIDFLTDDYIPNKINRNL 329
>gi|340053825|emb|CCC48119.1| putative meiotic recombination protein spo11 [Trypanosoma vivax
Y486]
Length = 459
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 37/218 (16%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L P+ Q VNRT+Q ++ L R LG+V SRG V G L
Sbjct: 128 TQRDIYYRLSRLVPD----QGCVNRTLQQLVQQLGIPRQWLGVVPGSRGCVGGTLSFCG- 182
Query: 150 NQEVIDCSACGSSGYSI----------------SGDLSL----LEKLDLKTDARYIIVVE 189
+D S G+ + G S+ E +L + RYIIVVE
Sbjct: 183 ----VDLRQHTSGGFPLPVRQEELRVTRRRLPREGTTSVSSNTHEGFELFGETRYIIVVE 238
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD--------LPILALV 241
KHA+F RL E+ +F+ +P +L+T+ G+P A LL L+RA + +P++ALV
Sbjct: 239 KHAVFFRLMEERIFDLVPCVLLTSHGFPTAAAITLLSNLHRATMEEEGNKKALVPVVALV 298
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRG 279
D+NP+GL+IL +K + + ++WLG+RG
Sbjct: 299 DYNPSGLSILQQYKHNAGNIQESRLVAVHALRWLGIRG 336
>gi|392593676|gb|EIW83001.1| DNA topoisomerase IV, alpha subunit, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 298
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 141/282 (50%), Gaps = 38/282 (13%)
Query: 71 RVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSL 130
+V V+ + +S T+R+++YK E F SQ V+R + DV A R +
Sbjct: 2 QVLGVLNLVHEAISGGYTTTKRDIYYK----DVELFKSQATVDRIVDDVAATFEAERSMM 57
Query: 131 GIVASSRGLVAGR-LMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVE 189
+ A+S+GL+ G L + +++VI CS G+ +E+ D+ +I++VE
Sbjct: 58 NVRATSKGLLLGNGLEIHLTSKDVI-CSNVSEGILIPPGEA--IERFDITEVPSWILIVE 114
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPD-LPILALVDWNPAGL 248
K +T+ Q+ I + KGYPD+ATR LL PD +PILALVD +P GL
Sbjct: 115 KE-----VTKLSHCGQV--IGLQGKGYPDVATRELLKTFGDNLPDSVPILALVDGDPHGL 167
Query: 249 AILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQ--LIPEQSLLPLKPRD-------- 297
IL +KFGS M E + A N ++ +G+ G ++ + L+P+ +D
Sbjct: 168 DILSVYKFGSASMKHEVDKLAANRIESVGIWGSELSDLGVGLSQLIPITKQDEAKEIMGY 227
Query: 298 ------LQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
LQ SLM S+ ++ EL+ M+H ++AE+E L
Sbjct: 228 LQALAMLQRPDSLMPSK-----WRSELARMLHLRRKAEIEVL 264
>gi|296110083|ref|YP_003617032.1| DNA topoisomerase (ATP-hydrolyzing) [methanocaldococcus infernus
ME]
gi|295434897|gb|ADG14068.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus infernus
ME]
Length = 369
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 150/302 (49%), Gaps = 16/302 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT S A K F + K+ME ++L + T RE +Y F Q N I+
Sbjct: 66 RTLTVSQA-KIFAQTTKMMEFAKELLENDDFSTLREAYYVSKNWGEARFDDQQASNNVIE 124
Query: 118 DVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLL 173
D+ A L R LG V G V G L + E E V+DC G+ Y+I D++
Sbjct: 125 DLEAALGVLREHLGFVPEEDGSAVVGPLKIIEETPEGELVVDCRRLGTGAYNIPNDIT-- 182
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
KL+ +TDA +I+ +E +F RL + +++ IL++ KG P ATR + RL+ +
Sbjct: 183 -KLNFETDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEY- 240
Query: 234 DLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLL 291
+LP+L D +P G L I T K GS A + + + +G+ D+ + +
Sbjct: 241 ELPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGITPQDI-IDYDLPTH 299
Query: 292 PLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAK 347
PLK +D++ I L + + ++ +++ L M+ G RAE ++L +G Y + Y+ +
Sbjct: 300 PLKEQDIKRIKDGLKNDDFVKSFPEWQKALKQMLEMGVRAEQQSLAKYGLKYVVNTYLPE 359
Query: 348 KI 349
K+
Sbjct: 360 KL 361
>gi|218884529|ref|YP_002428911.1| DNA topoisomerase VI subunit A [Desulfurococcus kamchatkensis
1221n]
gi|218766145|gb|ACL11544.1| Type 2 DNA topoisomerase VI subunit A [Desulfurococcus
kamchatkensis 1221n]
Length = 433
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 15/245 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCD------- 101
+ L RS N A+ F++ V + L + T R+L+Y+
Sbjct: 55 LLLGPETSKRSFMDVNEARKFMQTVLVASIIYDSLVNNEYPTIRDLYYRGKHSISYRSGG 114
Query: 102 ---SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA 158
+ Q + + I+D+ L+ R L I++ +G V G L+++ + +VID S
Sbjct: 115 KEVHENTWDEQKESDGVIRDLEVYLNILREELLILSKEKGKVVGNLVIRSGD-DVIDLSR 173
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G YSI L+E D+ DA YI+VVEK A+FQ+L + + +ILIT+ G PD
Sbjct: 174 MGHGAYSIEPTPDLIEFKDV--DAEYILVVEKDAVFQQLHRYGFWKKHKAILITSAGQPD 231
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGL 277
ATR L RL+ + +LP+ L D +P G I FK GSI + E+ R A K++G+
Sbjct: 232 RATRRFLRRLSDEY-NLPVYILADSDPYGFYIYSVFKIGSITLSYESERLATPRAKFIGV 290
Query: 278 RGDDV 282
DV
Sbjct: 291 MMTDV 295
>gi|390939025|ref|YP_006402763.1| DNA topoisomerase [Desulfurococcus fermentans DSM 16532]
gi|390192132|gb|AFL67188.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus fermentans DSM
16532]
Length = 433
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 15/245 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCD------- 101
+ L RS N A+ F++ V + L + T R+L+Y+
Sbjct: 55 LLLGPETSKRSFMDVNEARKFMQTVLVASIIYDSLVNNEYPTIRDLYYRGKHSISYRSGG 114
Query: 102 ---SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA 158
+ Q + + I+D+ L+ R L I++ +G V G L+++ + +VID S
Sbjct: 115 KEVHENTWEEQKESDGVIRDLEVYLNILREELLILSKEKGKVVGNLVIRSGD-DVIDLSR 173
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G YSI L+E D+ DA YI+VVEK A+FQ+L + + +ILIT+ G PD
Sbjct: 174 MGHGAYSIEPTPDLIEFKDV--DAEYILVVEKDAVFQQLHRYGFWKKHKAILITSAGQPD 231
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGL 277
ATR L RL+ + +LP+ L D +P G I FK GSI + E+ R A K++G+
Sbjct: 232 RATRRFLRRLSDEY-NLPVYILADSDPYGFYIYSVFKIGSITLSYESERLATPRAKFIGV 290
Query: 278 RGDDV 282
DV
Sbjct: 291 MMTDV 295
>gi|258597487|ref|XP_001350573.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254945371|gb|AAN36253.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 327
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 136/263 (51%), Gaps = 26/263 (9%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
T R++FY +P+ F +Q N+ I + ++ SR + I + +G++ G ++L+E
Sbjct: 58 TTLRQIFYT----NPKLFINQRNSNKIIGKLTKIIKTSREQINIYNAPKGIIRGNILLKE 113
Query: 149 -PNQEVIDCSACGSSGYSISGDLSL---LEKLDLKTDARYIIVVEKHAIFQRLTE-DFVF 203
+ + +DC + + + G L LE +++ + +YI+++EK IF +L + +++
Sbjct: 114 NKSSKWVDCM----NAFELRGHLICPFGLENINISSGVQYILIIEKETIFYKLLQSNYIS 169
Query: 204 NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
P+ILITAKG+PDI TR LL+ + + + +L I L D++ GL+I CT+ +
Sbjct: 170 TYGPTILITAKGFPDINTRQLLYEIQKRYRELKIFCLTDYDVYGLSIACTYASKNESKLY 229
Query: 264 EAYRYAC-NVKWLGL----RGDDVQLIPEQSLLPLKPRDLQIARSLMS--------SEIL 310
Y + N+ WL L G +I L L +D++I +L + S
Sbjct: 230 YVYDMSIENLHWLILFTPEEGIKKNVIKNTDLTKLTLKDIRILDNLCAKLKNNNKYSAAE 289
Query: 311 QENYKEELSLMVHNGQRAEVEAL 333
+ N+ E +S M G + E++A+
Sbjct: 290 RNNWIENISNMKKFGVKYEIDAI 312
>gi|296242524|ref|YP_003650011.1| DNA topoisomerase [Thermosphaera aggregans DSM 11486]
gi|296095108|gb|ADG91059.1| DNA topoisomerase (ATP-hydrolyzing) [Thermosphaera aggregans DSM
11486]
Length = 434
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 20/248 (8%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY------------ 96
+ L RS T N A+ F++ + + L + T R+L+Y
Sbjct: 55 LLLGPETLKRSFTDVNEARKFMQTMLMASIIYDSLVNNEYPTIRDLYYRGKHTISYRDID 114
Query: 97 -KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVID 155
K++ ++ + Q + + I+D+ L+ R L I++ +G V G L+++ + ID
Sbjct: 115 GKIVHENS--WEEQKESDSVIRDLEVFLNVLREELLILSKEKGKVVGNLVIRS-GDDTID 171
Query: 156 CSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKG 215
S G YSI L+E D+ DA Y++VVEK A+FQ+L + + +IL+T+ G
Sbjct: 172 LSRMGHGAYSIEPTPDLIEFKDV--DAEYVLVVEKDAVFQQLHRYGFWRKNKAILVTSAG 229
Query: 216 YPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKW 274
PD ATR + RLN LP+ L D +P G I FK GSI + E+ R A K+
Sbjct: 230 QPDRATRRFVRRLNEELK-LPVYVLADSDPYGYYIYSVFKIGSITLSYESERLATPGAKF 288
Query: 275 LGLRGDDV 282
+G+ DV
Sbjct: 289 IGVMMTDV 296
>gi|150401437|ref|YP_001325203.1| DNA topoisomerase VI subunit A [Methanococcus aeolicus Nankai-3]
gi|150014140|gb|ABR56591.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus aeolicus
Nankai-3]
Length = 363
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 151/305 (49%), Gaps = 21/305 (6%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K+ME ++L T RE +Y F Q N I+
Sbjct: 59 RALT-VNQAKIFAQTVKMMEFSKELLITNDFSTLREAYYVSKNWGEARFDDQQPSNSVIE 117
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLML---QEPNQEV-IDCSACGSSGYSISGDLSL 172
D+ A L+ R LG + G V G L + E N+E+ IDC+ GS Y+I D++
Sbjct: 118 DIEASLNFLREELGFIPEEDGASVVGPLKIVDKSEKNEELKIDCARLGSGAYNIPNDIT- 176
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
KL+ +TDA +I+ +E +F RL + + + ILI+ KG P ATR RLN
Sbjct: 177 --KLEFETDAEFILAIETAGMFARLNAEKFWKKHNCILISLKGVPARATRQFTKRLNEEH 234
Query: 233 PDLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQ 288
+LP+L D +P G L I T K GS A + + + + +G+ D+ +P
Sbjct: 235 -NLPVLVFTDGDPYGYLNIYRTLKVGSGKSVHLADKLSIPSARLIGVTPQDINDYDLPTH 293
Query: 289 SLLPLKPRDLQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFHGYDY-LGKY 344
PLK D++ + + ++ +++ E ++ M+ + +RAE ++L +G Y + +Y
Sbjct: 294 ---PLKDHDIKRLKDGLKNDDFVKSHPEWQKAINHMIESKERAEQQSLAKYGLKYVVEEY 350
Query: 345 IAKKI 349
+ KI
Sbjct: 351 LPAKI 355
>gi|209945748|gb|ACI97105.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLSTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETQAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FKRRFILITGKGYPDCCTRRIVHRLTEE-NQLEAYILVDADPFGVEIMLVYRHGSQSMCF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHNLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|126465878|ref|YP_001040987.1| DNA topoisomerase VI subunit A [Staphylothermus marinus F1]
gi|126014701|gb|ABN70079.1| Spo11/DNA topoisomerase VI, subunit A [Staphylothermus marinus F1]
Length = 434
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 25/274 (9%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKL---------- 98
+ L RS N A+ F++ + ++ L+ + T R+L+Y+
Sbjct: 56 LLLGPEMQRRSFLDVNEARKFMQTLLMASIIYEALANNEYPTIRDLYYRGKHTIIYRDLH 115
Query: 99 -LCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
+ Q + + I+D+ L R + I++ +G V G L+++ + ID S
Sbjct: 116 GRTHHENTWDEQRESDSVIRDLEVYLGVLREEMLILSKEKGKVVGNLVIKS-GDDTIDLS 174
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G YSI L+E D+ DA Y++VVEK A+FQ+L + + +ILIT+ G P
Sbjct: 175 KMGHGAYSIEPTPDLIEFKDV--DAEYVLVVEKDAVFQQLHRYGFWKKQKAILITSAGQP 232
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
D ATR + RLN LP+ L D +P G I FK GSI + E+ R A + K++G
Sbjct: 233 DRATRRFVRRLNEEL-KLPVYILADADPYGWYIYSVFKIGSITLSYESERLATPSAKFIG 291
Query: 277 LRGDDV---QLIPEQSLLPLKPRDLQIARSLMSS 307
+ DV ++I E K +DL+ +++ SS
Sbjct: 292 VTMTDVFGDEIIRE------KIKDLKSIKTISSS 319
>gi|209945760|gb|ACI97111.1| meiotic W68 [Drosophila melanogaster]
gi|209945762|gb|ACI97112.1| meiotic W68 [Drosophila melanogaster]
gi|209945764|gb|ACI97113.1| meiotic W68 [Drosophila melanogaster]
gi|209945766|gb|ACI97114.1| meiotic W68 [Drosophila melanogaster]
gi|209945770|gb|ACI97116.1| meiotic W68 [Drosophila melanogaster]
gi|209945772|gb|ACI97117.1| meiotic W68 [Drosophila melanogaster]
gi|209945774|gb|ACI97118.1| meiotic W68 [Drosophila melanogaster]
gi|209945776|gb|ACI97119.1| meiotic W68 [Drosophila melanogaster]
gi|209945778|gb|ACI97120.1| meiotic W68 [Drosophila melanogaster]
gi|209945780|gb|ACI97121.1| meiotic W68 [Drosophila melanogaster]
gi|209945782|gb|ACI97122.1| meiotic W68 [Drosophila melanogaster]
gi|209945784|gb|ACI97123.1| meiotic W68 [Drosophila melanogaster]
gi|209945786|gb|ACI97124.1| meiotic W68 [Drosophila melanogaster]
gi|209945788|gb|ACI97125.1| meiotic W68 [Drosophila melanogaster]
gi|209945794|gb|ACI97128.1| meiotic W68 [Drosophila melanogaster]
gi|209945796|gb|ACI97129.1| meiotic W68 [Drosophila melanogaster]
gi|209945802|gb|ACI97132.1| meiotic W68 [Drosophila melanogaster]
gi|209945804|gb|ACI97133.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|209945800|gb|ACI97131.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPISLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|209945744|gb|ACI97103.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 12/247 (4%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLSTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N +V+D S G ++ D + +++++ T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYGGP-LTLPTDPAKIDRIE--TQAEFVLIVEKESVFESLLSRNVFGTFKRR 187
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M +
Sbjct: 188 FILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSQSMSFSSQG 246
Query: 268 YAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 247 LTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHNLEPGVRQELRMLQDVQL 305
Query: 327 RAEVEAL 333
+AE+E++
Sbjct: 306 KAEIESV 312
>gi|226287116|gb|EEH42629.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 389
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 44/283 (15%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGI-----------VASSRG 138
++R+++Y P YF SQ V+R I D+ + R +L + A+++G
Sbjct: 95 SKRDIYYL----DPVYFGSQSVVDRCIDDLACTIGVDRSALHVELFSLIDSQYQAAAAKG 150
Query: 139 LVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL- 197
L GR + + ID G + + ++ +DL R+I+V+EK A F+RL
Sbjct: 151 LAVGRFNVTLNDNSTIDADLHAEVGMLVP-RVETVKNVDLSA-VRWILVIEKEATFRRLA 208
Query: 198 TEDFVFNQI--PSILITAKGYPDIATRFLLHRLNRAFP-----------DLPILALVDWN 244
T ++ P I+IT KGYPD+ TR L L+ P PI VD +
Sbjct: 209 TVNYHKTSAAGPGIMITGKGYPDLCTRAFLRLLSHTLPLPSVLGTLPSSPPPIYMFVDSD 268
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGD------DVQLIPEQSLLPLKPRD 297
P G+AI+ T+K+GS E +++W GLR D + + L+PL RD
Sbjct: 269 PDGMAIMSTYKYGSRAQAHENNNLTVSDIQWFGLRSSEVVSRLDAHIQDDDVLIPLTLRD 328
Query: 298 LQIARSLMSSEIL------QENYKEELSLMVHNGQRAEVEALY 334
+ A+ +++ + + ++ EL M+ + +AE+E LY
Sbjct: 329 RKKAQDMLARNPVFAEDGPEPTWRAELQHMLMSNVKAEIEVLY 371
>gi|209945798|gb|ACI97130.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TIRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|189237865|ref|XP_001815524.1| PREDICTED: similar to meiotic recombination protein spo11
[Tribolium castaneum]
Length = 380
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 141/268 (52%), Gaps = 17/268 (6%)
Query: 93 ELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQE 152
E++Y++ T+Q QVNR + D+ L+ + L I++ S GLV G L L + E
Sbjct: 125 EIYYQI----KHLVTNQEQVNRVVGDISQLVGVGPWDLNIISHS-GLVYGNLRLFWASGE 179
Query: 153 VIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI--PSIL 210
+ +C+ + I DL E +++ + A +I+VVEK +IF +L E+ + N++ P I+
Sbjct: 180 MTNCNTPATL---IPYDLD--EIIEIHSTANFILVVEKESIFHKLLEEDLPNKLARPFIM 234
Query: 211 ITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC 270
IT KG PDI TR L +L+ LP+ LVD + G+ I+ ++FG+I + + A
Sbjct: 235 ITGKGVPDINTRLFLKKLSTML-KLPVFVLVDPDLYGIRIMLNYRFGTITNCHLSEQLAV 293
Query: 271 -NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYK--EELSLMVHNGQR 327
N +WLG+ ++ Q + R+++ + ++ + K +EL+ ++H+G++
Sbjct: 294 PNARWLGVFPSEIAKFGIQ-FQNITQREVKAINETLKYPYMEAHPKIADELNYLLHSGKK 352
Query: 328 AEVEALYFHGYDYLGKYIAKKIVQADYI 355
+E L + Y+ K+ D+I
Sbjct: 353 GSIEGLVKNNTFLSEAYLPVKLFNQDFI 380
>gi|209945746|gb|ACI97104.1| meiotic W68 [Drosophila simulans]
gi|209945752|gb|ACI97107.1| meiotic W68 [Drosophila simulans]
gi|209945754|gb|ACI97108.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 12/247 (4%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLSTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N +V+D S G ++ D + +++++ T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYGGP-LTLPTDPAKIDRIE--TQAEFVLIVEKESVFESLLSRNVFGTFKRR 187
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M +
Sbjct: 188 FILITGKGYPDCCTRRIVHRLTEE-NQLEAYILVDADPFGVEIMLVYRHGSQSMSFSSQG 246
Query: 268 YAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 247 LTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHNLEPGVRQELRMLQDVQL 305
Query: 327 RAEVEAL 333
+AE+E++
Sbjct: 306 KAEIESV 312
>gi|195122807|ref|XP_002005902.1| GI20732 [Drosophila mojavensis]
gi|193910970|gb|EDW09837.1| GI20732 [Drosophila mojavensis]
Length = 325
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 141/268 (52%), Gaps = 25/268 (9%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y+ + + SQ ++ DV +L+ + +LGI+++S+GL+ G + L
Sbjct: 69 TIRGLYYR----NTQVVRSQSYIDAAKMDVCRMLNTAPVNLGILSASKGLITGDIKLLMN 124
Query: 150 NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS 208
N +V+DC+ CG+ ++ D +E+ + T+A +++VEK ++F+ L N + +
Sbjct: 125 NGDVLDCNVYCGA--ITLPTDFENVER--IVTNAEMVLIVEKESVFESL---LACNALST 177
Query: 209 -----ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
IL+T KGYPD TR +++RL +LP LVD +P G+ I+ ++ GS M
Sbjct: 178 FGLRFILLTGKGYPDCTTRRIVYRLTVEC-NLPAYILVDADPFGIEIMLVYQLGSQAMNF 236
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
A A ++W+GL ++ I +S +PL D + ++S L ++EL +
Sbjct: 237 SAKSLATPTLRWIGLHPSEIDSISNRS-VPLTQHDNKKIVDILSRSNLSLGVRQELCRLQ 295
Query: 323 HNGQRAEVEALYFHGYDYLGK-YIAKKI 349
+AE+E++ D+L YI KI
Sbjct: 296 QVQLKAEIESV----IDFLSPYYIPTKI 319
>gi|391331670|ref|XP_003740266.1| PREDICTED: meiotic recombination protein SPO11-like [Metaseiulus
occidentalis]
Length = 288
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 154/290 (53%), Gaps = 27/290 (9%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
V++ + +L++ + T R++FY D+ + F +Q+ V+ + D+ LL CSR L +V+
Sbjct: 3 VLKIVYSLLTRNEISTVRQIFY----DNVKLFENQMNVSLVLHDIAKLLDCSRRDLNVVS 58
Query: 135 SSRGLVAGRLMLQ-EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
+++GLV G L + E +E IDC S I D +E+++ T A +++VEK AI
Sbjct: 59 TAKGLVCGNLRWKLEDCKEWIDCR---SVPVLIPNDFRAVEQVE--TSANVVLIVEKDAI 113
Query: 194 FQRLTED----FVFN-QIPSILITAKGYPDIATRFLLHRL-NRAFPDLPILALVDWNPAG 247
FQ+L + F N I +L+T KG PD+ TR L+H L + A P L D + G
Sbjct: 114 FQKLLDQDALTFFRNLNIDLLLVTGKGVPDLNTRQLIHILAHLAIPLAKFFVLTDADAYG 173
Query: 248 LAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQ---LIPEQSLL--PLKPRDLQ--I 300
+ I + FGS+ ++W+GL +++ + PE ++ + + LQ +
Sbjct: 174 IEIAGIYSFGSLVQAYAENYGVPQIRWIGLLPSEIESFNMRPESRIVSSTMHQKRLQNLL 233
Query: 301 ARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
R M ++ ++ Y+E L L+ +AE++AL G+ +L + Y++ K+
Sbjct: 234 VRPWM--KLRRQWYQEVLKLLSLRC-KAEIQALDQFGHSFLLRTYLSDKL 280
>gi|195487129|ref|XP_002091779.1| GE12053 [Drosophila yakuba]
gi|194177880|gb|EDW91491.1| GE12053 [Drosophila yakuba]
Length = 331
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 21/268 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S LGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLIRSQSRIAEARLDVCRMLSTSPLRLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G ++L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPMTLPTDPEKIDRIETQAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FKRRFILITGKGYPDCCTRRIVHRLTME-NQLSAYILVDADPFGVEIMLVYRHGSQSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTVA-VALVAGDNKKINDLLARNDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I + +
Sbjct: 302 DVQLKAEIESVVDFLTDDYIPNKINRNL 329
>gi|440791105|gb|ELR12359.1| topoisomerase Spo11, putative [Acanthamoeba castellanii str. Neff]
Length = 312
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 61/308 (19%)
Query: 54 SFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVN 113
S T +L + K+FV + ++ME ++L K T+R+++Y + F Q V+
Sbjct: 60 SLTTLALRSNKTLKSFVVMLRIMEVVHELLLSNKHATKRDIYYMDVT----LFEKQAIVD 115
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I+++ ++LH R +L +V + + LVAG + +E + IDC
Sbjct: 116 RAIENIASMLHVPRTALHVVGTEKSLVAGHVNWKEKG-DTIDCM---------------- 158
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
L T KG PD+A R + L P
Sbjct: 159 ----------------------------------HYLHTGKGVPDLAARRFVRMLKDTLP 184
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSL 290
L +LAL D++P GL ILCT+ FGS+ M +A A + WLG+ +D++ +P
Sbjct: 185 SLVVLALCDYDPWGLQILCTYAFGSLRMTYDAESLATPELLWLGVHDEDLKKWELPAACF 244
Query: 291 LPLKPRDLQIARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAK 347
L D + +++S LQ ++ +L M+ G++ E++AL +L ++
Sbjct: 245 ANLTDVDKRKGETMLSMPALQAKPTWRNQLKSMLAGGKKIEMQALSSISISFLCDTFLPD 304
Query: 348 KIVQADYI 355
K+ +A ++
Sbjct: 305 KMAKAQWL 312
>gi|198457624|ref|XP_002138430.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
gi|198136050|gb|EDY68988.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
Length = 333
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 13/264 (4%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y P+ +Q + DV +L+ S LG++++S+GL+AG + +
Sbjct: 77 TVRGLYYS----DPQLIRTQRHIAAARLDVCHILNTSPTRLGVLSASKGLMAGDIRMLMT 132
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N +V+DC+ S + D +E+ + T A +++VVEK ++F+ L +F
Sbjct: 133 NGDVLDCNVY-SGAIILPTDTEKVER--IVTQADFVLVVEKESVFESLLARDLFGTFGRR 189
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
IL+T KGYPD +TR +LHRL+ LP LVD +P G+ I+ ++ GS M +
Sbjct: 190 CILVTGKGYPDCSTRRILHRLSTEC-HLPAYILVDADPFGIEIMLVYRLGSQSMSFTSGD 248
Query: 268 YAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
A ++W+GL ++ + + + L D + +++ + + ++EL + Q
Sbjct: 249 LATPTLRWIGLHPSEIPALSSGA-VALSSGDNKKIDDILARDYIGPGVRQELRSLQQIQQ 307
Query: 327 RAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I + +
Sbjct: 308 KAEIESVIDFLSTDYIPNKINRNL 331
>gi|118431159|ref|NP_147432.2| DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
gi|150421694|sp|Q9YE67.2|TOP6A_AERPE RecName: Full=Type II DNA topoisomerase VI subunit A
gi|116062483|dbj|BAA79679.2| type II DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
Length = 389
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 30/324 (9%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK-----LLCD------SPEYF 106
R ++ F++ + +Q L + + T R+L+YK + D +
Sbjct: 69 REFLNVGESRRFMQTLLMASIIYQSLIENEYPTIRDLYYKGKHTIVYRDYSGRKREENTW 128
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
Q + + IQD+ R + I++ +G V G + ++ +VID S G Y+I
Sbjct: 129 DEQKESDSVIQDIEVYTGLFREDMLILSKEKGKVVGNMRIR-SGGDVIDLSKLGHGAYAI 187
Query: 167 SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
L+E LD+ DA +++VVEK A+FQ+L + + ++L+T G PD ATR +
Sbjct: 188 EPTPDLIEFLDV--DAEFVLVVEKDAVFQQLHRAGFWKKYKALLVTGSGQPDRATRRFVR 245
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--- 282
RL+ LP+ + D +P G I +K GSI + E+ R A K+LG++ D+
Sbjct: 246 RLHEELK-LPVYIITDSDPYGWYIYSVYKVGSITLSYESERLATPKAKFLGVQMTDIFGY 304
Query: 283 --------QLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEA 332
+ ++ ++ +D++ A+ L++ + +N + E+ L + + + E+EA
Sbjct: 305 RGKKPYLSEAERKKFMIKATDKDIKRAKELLNYSWIGKNRRWNVEIRLFLKHLVKLEIEA 364
Query: 333 LYFHGYDYLG-KYIAKKIVQADYI 355
+ G + +YI +KI D+I
Sbjct: 365 IASKGLKFFAYQYIPEKIETGDWI 388
>gi|406866418|gb|EKD19458.1| meiosis-specific topoisomerase Spo11 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 430
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 37/270 (13%)
Query: 93 ELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQE 152
+++Y+ PE F Q V+R + D+ +R +L +++ S + P+Q
Sbjct: 187 DIYYR----EPELFMKQAVVDRYVDDIAYTFGVNRDALNVMSQS--------LTSPPSQR 234
Query: 153 VIDCSACGSSGYSISG--DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI---P 207
G I ++S ++ LD+ R+I+V+EK A F+ L +
Sbjct: 235 ---------QGLLIPNPSEISTIQFLDV----RWILVIEKEATFRTLASAQYWQSSLAGR 281
Query: 208 SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
IL+TAKGYPDI TR LH L+ P + ILALVD++P G+ I+ T+K GS + E
Sbjct: 282 GILLTAKGYPDIQTRQFLHLLSTCHPSIAILALVDFDPDGIGIMATYKHGSQSLAHEQDL 341
Query: 268 YACNVKWLGLRGDDVQLI----PEQSLLPLKPRDLQIA-RSLMSSEILQENYKEELSLMV 322
+V+WLG+R D+ + E LL L RD ++A R L + + EL +M+
Sbjct: 342 AVPSVRWLGVRSGDIGAVGVGEGEPGLLRLSARDRRVAVRMLERGGQVDAEWMRELRVML 401
Query: 323 HNGQRAEVEALYFHGYDYLGKYIAKKIVQA 352
+AE++ L G L +++ +K++ A
Sbjct: 402 VLNVKAEIQIL--GGGGRLAEWLDEKLLDA 429
>gi|209945758|gb|ACI97110.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S +LGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLNLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|336121527|ref|YP_004576302.1| type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
gi|334856048|gb|AEH06524.1| Type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
Length = 365
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 168/356 (47%), Gaps = 24/356 (6%)
Query: 5 IEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSN 64
I+V+ + ILN P + P+ R +N+R + T V L R+LT N
Sbjct: 15 IDVANHMYNSILNGKRPKLK-FPV--RSLANARFDKEKGTFV----LMGKEKERTLT-VN 66
Query: 65 AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
AK F + K+ME ++L + T RE +Y F Q N I+D+ A L+
Sbjct: 67 QAKIFAQTVKMMEFSKELLDTDDFSTLREAYYVSKNWGEARFDDQQPSNSVIEDLEAALN 126
Query: 125 CSRFSLGIVASSRGL-VAGRLMLQEPNQE----VIDCSACGSSGYSISGDLSLLEKLDLK 179
R LG + G V G L + + + E +DC GS Y+I D++ KL+ +
Sbjct: 127 FLREELGFIPEEDGSSVVGPLKVVDKSAEGEELKVDCEKLGSGAYNIPNDIT---KLEFE 183
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
TDA +I+ +E +F RL + + + IL + KG P ATR + RLN +LP+L
Sbjct: 184 TDADFILAIETAGMFARLNAEKFWKKHNCILASLKGVPARATRRFIKRLNEEH-ELPVLV 242
Query: 240 LVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRD 297
D +P G L I T K GS A + A + +G+ D+ + + PLK D
Sbjct: 243 FTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPAARLIGVTPQDI-VDYDLPTHPLKDHD 301
Query: 298 LQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
L+ + + ++ +++ E L+ M+ +RAE ++L +G Y + +Y+ KI
Sbjct: 302 LKRLKDGLKNDDFVKSFPEWQKALNQMIEMKERAEQQSLAKYGLKYVVEEYLPAKI 357
>gi|346318300|gb|EGX87904.1| meiotic recombination protein spo11 [Cordyceps militaris CM01]
Length = 301
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 76 METCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVAS 135
M+ Q ++ +T+R ++Y+ E F +Q V+ + D+ L R +L I +S
Sbjct: 1 MQLAHQAMTTGTILTKRHIYYQ----HQELFETQRVVDELVDDLAYTLDTDRDNLHITSS 56
Query: 136 SRGLVAGRLMLQEPNQEVIDCSACG-SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
S+G V+G +++ + EV+D S + S +S +E DAR+++VVEK A+F
Sbjct: 57 SKGSVSGCMIIHLRSGEVVDASENELGTAVPFSRSVSRIEA----RDARWLLVVEKDAVF 112
Query: 195 QRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
+ L + IL+TA+GYPD+ TR L ++ P LP+L L D++P GL+I
Sbjct: 113 RSLVAVRFWETSLAGSGILVTARGYPDLMTRSFLTKIEAECPHLPMLVLSDFDPDGLSIF 172
Query: 252 CTFKFGSIGMGMEAYRYACNVKWLGLR 278
+++G+ E+ N WLG++
Sbjct: 173 SCYRYGTTNFSHESSNVRINFGWLGIQ 199
>gi|195150845|ref|XP_002016361.1| GL10528 [Drosophila persimilis]
gi|194110208|gb|EDW32251.1| GL10528 [Drosophila persimilis]
Length = 333
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 135/264 (51%), Gaps = 13/264 (4%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y P+ +Q + DV +L+ S LG++++S+GL+ G + +
Sbjct: 77 TVRGLYYS----DPQLIRTQRHIAAARLDVCHMLNTSPIRLGVLSASKGLMTGDIRMLMT 132
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N +V+DC+ S + D +E+ + T A +++VVEK ++F+ L +F
Sbjct: 133 NGDVLDCNVY-SGAIILPTDTEKVER--IVTQADFVLVVEKESVFESLLARDLFGTFGRR 189
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
IL+T KGYPD +TR +LHRL+ LP LVD +P G+ I+ ++ GS M +
Sbjct: 190 CILVTGKGYPDCSTRRILHRLSTEC-HLPAYILVDADPFGIEIMLVYRLGSQSMSFTSGD 248
Query: 268 YAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
A ++W+GL ++ + + + L D + +++ + + ++EL + Q
Sbjct: 249 LATPTLRWIGLHPSEIPALSSGA-VALSSGDNKKIDDILARDYIGPGVRQELRSLQQIQQ 307
Query: 327 RAEVEALY-FHGYDYLGKYIAKKI 349
+AE+E++ F DY+ I + +
Sbjct: 308 KAEIESVIDFLSTDYIPNKINRNL 331
>gi|449470533|ref|XP_004152971.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+ + A YI+VVEK ++FQRL D ++ I+IT +GYPD+ +R L RL LP
Sbjct: 18 ITSAADYILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFL-RLLVDVSALPA 76
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQL--IPEQSLLPLK 294
LVD +P G IL T++FGS+ M +A Y ++WLG D + +PEQ L+PL
Sbjct: 77 FCLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLT 136
Query: 295 PRDLQIARSLMSSEILQ---ENYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKI 349
+D +L+ L+ ++++ EL M+ G + E+EAL H +L +Y+ KI
Sbjct: 137 FKDKSRTEALLQRCYLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKI 195
>gi|209945792|gb|ACI97127.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+ E+E++
Sbjct: 302 DVQLKVEIESV 312
>gi|449470576|ref|XP_004152992.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 187
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+ + A YI+VVEK ++FQRL D ++ I+IT +GYPD+ +R L L LP
Sbjct: 1 ITSAADYILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVLA-LPA 59
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQL--IPEQSLLPLK 294
LVD +P G IL T++FGS+ M +A Y ++WLG D + +PEQ L+PL
Sbjct: 60 FCLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLT 119
Query: 295 PRDLQIARSLMSSEILQ---ENYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKI 349
+D +L+ L+ ++++ EL M+ G + E+EAL H +L +Y+ KI
Sbjct: 120 FKDKSRTEALLQRCYLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKI 178
>gi|256811385|ref|YP_003128754.1| DNA topoisomerase VI subunit A [Methanocaldococcus fervens AG86]
gi|256794585|gb|ACV25254.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus fervens
AG86]
Length = 369
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 149/302 (49%), Gaps = 16/302 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K++E Q+L T RE +Y F Q N I+
Sbjct: 66 RTLT-VNQAKIFAQTTKMLEFAKQLLETNDFSTLREAYYVSKNWGEARFDDQQASNNVIE 124
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLL 173
D+ A L R LG + G V G L + E E V+DC+ G+ Y+I D++
Sbjct: 125 DLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGAYNIPNDVT-- 182
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
KL+L+TDA +++ +E +F RL + +++ IL++ KG P ATR + RL
Sbjct: 183 -KLNLETDADFVLAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLYEEH- 240
Query: 234 DLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLL 291
+LP+L D +P G L I T K GS A + + + +G+ D+ + +
Sbjct: 241 ELPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDI-VDYDLPTH 299
Query: 292 PLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAK 347
PLK +D++ I L + + ++ +++ L M+ G RAE ++L +G Y + Y+ +
Sbjct: 300 PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVDTYLPE 359
Query: 348 KI 349
KI
Sbjct: 360 KI 361
>gi|154285542|ref|XP_001543566.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407207|gb|EDN02748.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 420
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 165/351 (47%), Gaps = 52/351 (14%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKA--FVRVWKVMETCFQILSQE 86
+ R+S++S S T + CT S A +A F + +++ + + +
Sbjct: 59 LKRRSNHSHFSLNPETGALQRDTTEPSCTYSWPGKTAQEAWRFAVLLRILGHISEAIRGD 118
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLML 146
++R+++Y P YF SQ V+R I D+ + R +L + A+++G+V G +
Sbjct: 119 FISSKRDIYYL----DPVYFGSQSVVDRCIDDIACTIGVDRTALHVAAAAKGVVVGTFNV 174
Query: 147 QEPNQEVIDCSACGSSGYSISGD-----------------LSLLEKLDLKTDARYIIVVE 189
+ +ID + + D + ++K+D T R+I+V+E
Sbjct: 175 TLNDDFMIDVAVHAEVSLLLLPDSFPFVILTCIQGMLVPRVETVKKIDTST-IRWILVIE 233
Query: 190 KHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDL---------PI 237
K A F RL T ++ ILIT KGYPDI+TR LH L+R P PI
Sbjct: 234 KEATFHRLATVNYHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPI 293
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP-------EQS 289
LVD +P G+AI+ T+K+GS + A NV+WLGL+ +L+P + +
Sbjct: 294 FMLVDGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQAS--ELVPSSLEIQGDDA 351
Query: 290 LLPLKPRDLQIARSLMS-SEILQENYKE-----ELSLMVHNGQRAEVEALY 334
L+PL RD + A+ ++ S + E+ E EL M+ +AE+E LY
Sbjct: 352 LIPLTSRDRKKAQDMLGRSPVFAEDGPEPAWRWELQHMLMTNVKAEIEMLY 402
>gi|282163829|ref|YP_003356214.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
gi|282156143|dbj|BAI61231.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
Length = 366
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 154/304 (50%), Gaps = 19/304 (6%)
Query: 66 AKAFVRVWKVMETCFQILSQEK-RVTQRELFYKLLCDSP----EYFTSQLQVNRTIQDVI 120
AK F++ + + +L Q+K ++ R+LFY L + P F Q + + I+D+
Sbjct: 67 AKKFLQTMLIAKQIKILLEQDKPALSIRQLFYTLKHEIPGAGENTFDLQEESDPIIEDME 126
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI----SGDLSLLEKL 176
+ + R L ++A+ G+++G +++++ +V+D + GS+G ++ D ++++
Sbjct: 127 LVTNSLREELNLIATPNGVLSGPMVVEDKTGDVLDFTKMGSAGGAVPPIVEDDFFHIKEM 186
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
A YI+VVEK+A++ L ++ + + +L+T KG P A R LL R + +P
Sbjct: 187 S----ADYILVVEKYAVWNLLNQEKYWKKNNCLLLTGKGQPARAERRLLARFGEEYK-IP 241
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPL 293
I D +P G I +K GSI + + + AC K++GL DV+ IP S + L
Sbjct: 242 IYVFTDMDPWGYYIYSVYKSGSINLAFFSEKAACPRAKYIGLSVKDVREFDIPRSSWVKL 301
Query: 294 KPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQ 351
D + + S + +++ +++EL+ + G + E +AL ++ Y+ KI
Sbjct: 302 NDEDFKRMEEIASYDWFKKDKWQKELADLKKFGYKIEQDALVSKSIEFTANNYLPAKIEN 361
Query: 352 ADYI 355
DY
Sbjct: 362 KDYF 365
>gi|209945742|gb|ACI97102.1| meiotic W68 [Drosophila yakuba]
Length = 319
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 129/251 (51%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S LGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLIRSQSRIAEARLDVCRMLSTSPLRLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G ++L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPMTLPTDPEKIDRIETQAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FKRRFILITGKGYPDCCTRRIVHRLTME-NQLSAYILVDADPFGVEIMLVYRHGSQSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTVA-VALVAGDNKKINDLLARNDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|195382444|ref|XP_002049940.1| GJ20469 [Drosophila virilis]
gi|194144737|gb|EDW61133.1| GJ20469 [Drosophila virilis]
Length = 349
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 137/259 (52%), Gaps = 18/259 (6%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y+ SQ + DV +L+ + +LGI+++S+GL+AG + L
Sbjct: 93 TIRGLYYR----DTHVVRSQSYIVAAKLDVCRMLNTAPVNLGILSASKGLIAGDIKLLMS 148
Query: 150 NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP- 207
N +++DC+ CG+ ++ D +E+ + T+A +++VEK ++F+ L N I
Sbjct: 149 NGDILDCNVYCGA--ITLPTDFENVER--IVTNAEMVLIVEKESVFESLLACNACNTIGL 204
Query: 208 -SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY 266
IL+T KGYPD TR ++HRL+ +LP LVD +P G+ I+ T++ GS M +
Sbjct: 205 RFILLTGKGYPDCTTRRIVHRLSVEC-NLPAYILVDADPFGIEIMLTYRHGSQAMSFSSK 263
Query: 267 RYACNV-KWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNG 325
A + +WLGL ++ I +++ + L D + ++S + ++EL +
Sbjct: 264 SLATPMLRWLGLHPSEIDSISKRA-VALTKYDNKKILDILSRSYISLGVRQELQTLQRIQ 322
Query: 326 QRAEVEALYFHGYDYLGKY 344
+AE+E++ D+L Y
Sbjct: 323 FKAEIESV----IDFLSPY 337
>gi|449464882|ref|XP_004150158.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+ + A YI+VVEK ++FQRL D ++ I+IT +GYPD+ +R L L LP
Sbjct: 18 ITSAADYILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVLA-LPA 76
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQL--IPEQSLLPLK 294
LVD +P G IL T++FGS+ M +A Y ++WLG D + +PEQ L+PL
Sbjct: 77 FCLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLT 136
Query: 295 PRDLQIARSLMSSEILQ---ENYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKI 349
+D +L+ L+ ++++ EL M+ G + E+EAL H +L +Y+ KI
Sbjct: 137 FKDKSRTEALLQRCYLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKI 195
>gi|383320074|ref|YP_005380915.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
gi|379321444|gb|AFD00397.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
Length = 365
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 19/304 (6%)
Query: 66 AKAFVRVWKVMETCFQILSQEK-RVTQRELFYKLLCDSP----EYFTSQLQVNRTIQDVI 120
AK F++ + + +L Q+K ++ R+LFY L + P F Q + + I+D+
Sbjct: 66 AKKFLQTILIAKQIKALLEQDKPALSIRQLFYTLKHEIPGTGENTFDVQEESDPIIEDME 125
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI----SGDLSLLEKL 176
+ R L ++A+ G++AG +++++ +V+D + GS+G ++ D ++++
Sbjct: 126 LMTDSLREELNLIATPNGVLAGPMIVEDKTGDVLDFTKMGSAGGAVPPIVEDDYFHIKEM 185
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
A YI+VVEK+A++ L ++ + + +L+T KG P A R LL R + +P
Sbjct: 186 S----ADYILVVEKYAVWNLLNQEKYWKKNNCLLLTGKGQPARAERRLLARFGEEYK-IP 240
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPL 293
I D +P G I +K GSI + + + AC K+LGL DV IP S + L
Sbjct: 241 IYVFTDMDPWGYYIYSVYKSGSINLAFFSEKAACPRAKYLGLSVKDVMDFDIPRSSWVKL 300
Query: 294 KPRDLQIARSLMSSEIL-QENYKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQ 351
D + + + +E ++ EL+ + G + E +AL ++ Y+ KI
Sbjct: 301 NEEDFKRMEEIAAYPWFKKERWQRELADLKKFGYKIEQDALVSKSIEFTANNYLPTKISN 360
Query: 352 ADYI 355
DY
Sbjct: 361 NDYF 364
>gi|119183419|ref|XP_001242749.1| hypothetical protein CIMG_06645 [Coccidioides immitis RS]
Length = 354
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 62/357 (17%)
Query: 1 VRARIEVSVINFLKILNSPD--PAISDLPLINRKSSNSRVSQ---GLLTDVSWIFLSHSF 55
V+ IE ++ + L L+ PD P+++ L +++++N +++ L D + S ++
Sbjct: 21 VKQFIESTLASVLDELSKPDGRPSVT-LKRRSKRANNCSLNEETGALQVDTNGREWSVTY 79
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
T ++A K F + +++ + + + ++R+++Y P YF SQ V+
Sbjct: 80 SWPGKTVTDAWK-FGVIMRILGHISEAIEGKFISSKRDIYYL----DPAYFGSQRLVDGY 134
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEK 175
I D+ + R +L + G++ R E++ G+ +SG
Sbjct: 135 IDDIAYTVGVDRAALHV-----GILIPRA------HEIV--------GFDLSG------- 168
Query: 176 LDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATRFLLHRLN--R 230
R+I+++EK A+F RL T ++ ILIT KGYPD++TR L ++ R
Sbjct: 169 ------VRWILIIEKEAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSISEWR 222
Query: 231 AFPD--LPILALVDWNPAGLAILCTFKFGSIGMGME-AYRYACNVKWLGLRGDDVQLIP- 286
P +PI LVD +P G+AI+ T+K+GSI E A V+WLGLR D IP
Sbjct: 223 NSPARFIPIYVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTA-IPG 281
Query: 287 ----EQSLLPLKPRDLQIARSLMSSEIL-----QENYKEELSLMVHNGQRAEVEALY 334
++ L+P+ RD A++++S ++ ++ ++ EL M+ +AE+E LY
Sbjct: 282 NADVDRPLIPMTLRDRTRAQAMLSHSVIFSDEREQEWRLELQRMLMVNAKAEIEVLY 338
>gi|408405571|ref|YP_006863554.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366167|gb|AFU59897.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 368
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 142/288 (49%), Gaps = 18/288 (6%)
Query: 81 QILSQEKRVTQRELFYKLLC------DSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
++L +E T R ++Y L + +++T Q + I+ + L R + +
Sbjct: 86 KLLDEEMESTIRGMYYATLSTVGDEKNKQKFWTGQEDSDDAIKAIELLTGVPREEFSVTS 145
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYS--ISGDLSLLEKLDLKTDARYIIVVEKHA 192
+G+++G + L+ +VIDC+ GS S I ++ +E + +K D +++VVEK
Sbjct: 146 KPKGMISGPITLR-VGGDVIDCN-LGSRATSQLIPTNIRDVEIVKVKAD--FVMVVEKDT 201
Query: 193 IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+ + + + +IL+T G PD ATR ++ LN + P++ D +P GL I
Sbjct: 202 VLNNIRKSGFIQKYNAILMTGSGEPDRATRMMVKALNEEWKK-PVVVFADADPWGLGIAL 260
Query: 253 TFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEI 309
+K GS + ++ R + K LG+ D+ IPE + L DL A +
Sbjct: 261 RYKIGSESLSYDSDRLVTPDAKVLGMMFSDIYEYNIPEVARLAASDDDLNRANDMKKKPW 320
Query: 310 LQEN-YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
Q+ +++EL L + ++ E++A + HG+ YL + Y+ +K+ +A I
Sbjct: 321 FQDKQWQKELDLFLKKKEKCELDAFFKHGFKYLAEVYLPRKLREAGVI 368
>gi|209945756|gb|ACI97109.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLM 321
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRML 300
>gi|209945790|gb|ACI97126.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 20/239 (8%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK ++F+ L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESVFESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLM 321
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRML 300
>gi|150399499|ref|YP_001323266.1| DNA topoisomerase VI subunit A [Methanococcus vannielii SB]
gi|150012202|gb|ABR54654.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus vannielii SB]
Length = 365
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 17/303 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K+ME +L T RE +Y F Q N I+
Sbjct: 61 RTLT-VNQAKIFAQTIKMMEFSKSLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIE 119
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQE---PNQEV-IDCSACGSSGYSISGDLSL 172
D+ A R LG + G V G L +++ +E+ IDC+ GS YSI D++
Sbjct: 120 DIEAASEHLREDLGFIPEEDGAAVVGPLKIRDRTADGEEIRIDCAKLGSGAYSIPNDVT- 178
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
KL+ T A +I+ +E +F RL + +N+ ILI+ KG P ATR + RLN
Sbjct: 179 --KLEFDTKAEFILAIETAGMFARLNAEGFWNKHNCILISLKGVPARATRRFIKRLNEEH 236
Query: 233 PDLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSL 290
LPIL D +P G L I T K GS A + A + + +G+ D+ L +
Sbjct: 237 K-LPILVFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAIPDARLIGVTPQDI-LDYDLPT 294
Query: 291 LPLKPRDLQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFHGYDY-LGKYIA 346
PLK D++ + + ++ ++ E L+ M RAE ++L +G Y + +Y+
Sbjct: 295 HPLKDHDIKRLKDGLKNDDFVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLP 354
Query: 347 KKI 349
K+
Sbjct: 355 TKV 357
>gi|56118718|ref|NP_001008200.1| SPO11 meiotic protein covalently bound to DSB homolog [Xenopus
(Silurana) tropicalis]
gi|51513369|gb|AAH80352.1| spo11 protein [Xenopus (Silurana) tropicalis]
Length = 373
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 12/196 (6%)
Query: 56 CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
CT +SN AK+ F + KV+ ++++ + T+R+++Y + + + SQ V
Sbjct: 95 CTTRKVRSNCAKSAQKFALMLKVLSVIYKLVQTDTYTTKRDIYY----NDVQLYGSQTVV 150
Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
+ + D+ +L R +L I+++S+G VAG L + + CG S + +++
Sbjct: 151 DNIVSDLSCMLKIPRINLHILSTSKGCVAGDLWFTAEDGSKV---YCGGSSSGVLVPINV 207
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
L T A++I+++EK A FQRL +D F P ILIT KG PD+ TR L +L +
Sbjct: 208 EGIRHLSTQAKFILIIEKDATFQRLLDDNFCARSGPCILITGKGVPDLNTRLLTRKLWDS 267
Query: 232 FPDLPILALVDWNPAG 247
F +PI LVD +P G
Sbjct: 268 F-HIPIFTLVDADPYG 282
>gi|169807684|emb|CAQ16341.1| Topoisomerase 6 subunit A [Platanus x acerifolia]
Length = 138
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
D+++DA +I++VEK A + RL ED +N+ P I++TAKG PD+ATR L ++ LP
Sbjct: 19 DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLKKMKTEL-KLP 77
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPL 293
+LALVD +P GL IL + GS M ++ ++KWLG+R D+ IPEQ LP+
Sbjct: 78 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPM 137
>gi|376372946|gb|ACZ58078.2| topoisomerase 6 subunit A [Oryza sativa Japonica Group]
Length = 487
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 16/291 (5%)
Query: 57 TRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
+RS +N + R ++ + L +++R + Y + + F Q + ++ I
Sbjct: 174 SRSFCNANQREVASRTGYTIDLIERTLGAGLNISKRTVLYT----NKDLFGDQSKSDQAI 229
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL 176
D+ AL + R SLGI+A+ +G+V G + L+ N + I CS G I L ++ +
Sbjct: 230 NDICALTNIRRGSLGIIAAEKGIVVGNIFLELTNGKSISCSI----GVQIPHRLDQIKDV 285
Query: 177 DLKTDAR---YIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
++ +R YI+VVEKH + L E I++T G P + TR L R +
Sbjct: 286 CVEIGSRNIEYILVVEKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFL-RFLKQRT 344
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD-VQL-IPEQSL 290
LP+ L D +P G++IL T+ GS + + + ++ W+GL D ++L + E +
Sbjct: 345 GLPVFGLCDPDPEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNY 404
Query: 291 LPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
L D + ++L + L + +K + M+ ++A EA++ G+DY
Sbjct: 405 SRLSREDKTMLKNLWQDD-LSDVWKRRIEEMISFDKKASFEAIHSLGFDYF 454
>gi|115489640|ref|NP_001067307.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|108862984|gb|ABA99412.2| Type IIB DNA topoisomerase family protein, expressed [Oryza sativa
Japonica Group]
gi|113649814|dbj|BAF30326.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|125537460|gb|EAY83948.1| hypothetical protein OsI_39169 [Oryza sativa Indica Group]
gi|125580120|gb|EAZ21266.1| hypothetical protein OsJ_36918 [Oryza sativa Japonica Group]
gi|150371047|dbj|BAF65347.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|215715276|dbj|BAG95027.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 487
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 16/291 (5%)
Query: 57 TRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
+RS +N + R ++ + L +++R + Y + + F Q + ++ I
Sbjct: 174 SRSFCNANQREVASRTGYTIDLIERTLGAGLNISKRTVLYT----NKDLFGDQSKSDQAI 229
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL 176
D+ AL + R SLGI+A+ +G+V G + L+ N + I CS G I L ++ +
Sbjct: 230 NDICALTNIRRGSLGIIAAEKGIVVGNIFLELTNGKSISCSI----GVQIPHRLDQIKDV 285
Query: 177 DLKTDAR---YIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
++ +R YI+VVEKH + L E I++T G P + TR L R +
Sbjct: 286 CVEIGSRNIEYILVVEKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFL-RFLKQRT 344
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD-VQL-IPEQSL 290
LP+ L D +P G++IL T+ GS + + + ++ W+GL D ++L + E +
Sbjct: 345 GLPVFGLCDPDPEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNY 404
Query: 291 LPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
L D + ++L + L + +K + M+ ++A EA++ G+DY
Sbjct: 405 SRLSREDKTMLKNLWQDD-LSDVWKRRIEEMISFDKKASFEAIHSLGFDYF 454
>gi|333910721|ref|YP_004484454.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
gi|333751310|gb|AEF96389.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
Length = 365
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 148/303 (48%), Gaps = 17/303 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N AK F + K++E Q+L T RE +Y F Q N I+
Sbjct: 61 RTLT-VNQAKIFAQTVKMLEFSKQLLDSNDFSTLREAYYVSKNWGEARFDDQQPSNNVIE 119
Query: 118 DVIALLHCSRFSLGIVASSRG-LVAGRLML--QEPNQEVI--DCSACGSSGYSISGDLSL 172
D+ A L R LG + G V G L + + P E I DC+ G+ Y+I D++
Sbjct: 120 DLEAALDVLREDLGFIPEEDGSAVVGPLKIIDRTPEGEEIKVDCTKLGTGAYNIPNDVTR 179
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
LE +T+A +I+ +E +F RL + +++ IL++ KG P ATR + RLN
Sbjct: 180 LE---FETNADFILAIETAGMFARLNAEKFWDKHNCILVSLKGVPARATRRFIKRLNEEH 236
Query: 233 PDLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSL 290
D+P+L D +P G L I T K GS A + A + + +G+ D+ + +
Sbjct: 237 -DIPVLVFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPSARLIGVTPQDI-IDYDLPT 294
Query: 291 LPLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIA 346
PLK +D++ I L + + ++ +++ L M+ RAE ++L +G Y + Y+
Sbjct: 295 HPLKEQDIKRIKDGLKNDDFVKSFPEWQKALKQMLDMKVRAEQQSLAKYGLKYVVDTYLP 354
Query: 347 KKI 349
+KI
Sbjct: 355 EKI 357
>gi|317032060|ref|XP_001393922.2| meiotic recombination protein spo11 [Aspergillus niger CBS 513.88]
Length = 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 25/289 (8%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N A F +V+ + + V++R+++Y P F SQ V+ + D+ +
Sbjct: 92 NEALKFTAALRVLAAIAEAVQAGLVVSKRDIYYS----DPICFGSQKTVDTLVDDLAHTM 147
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDAR 183
R +L + A+++GLV G + + V+D ++ + + K+DLK D
Sbjct: 148 GVDRAALYVGAAAKGLVVGYYQMTTTSAGVVDARLSNQD--TLVPRMQDIHKVDLK-DVA 204
Query: 184 YIIVVEKHAIFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRL---NRAFPDLP- 236
+++V+EK A+++RL + + +L+T KGYPD++TR + +L + P
Sbjct: 205 WVLVLEKEAVYRRLASSNYHIRSAAGKGVLVTGKGYPDLSTRAFVRKLFDHSHQLTKKPQ 264
Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV----QLIPEQSLL 291
ALVD +P G+AI+ T+K+GS+ E + WLGLR +V + + +LL
Sbjct: 265 FYALVDGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLAEVVAGADPLGDGTLL 324
Query: 292 PLKPRDLQIARSLMSSEILQE------NYKEELSLMVHNGQRAEVEALY 334
L RD + A ++S + E ++ EL M+ +AE+E LY
Sbjct: 325 HLTKRDRKKAIDMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEILY 373
>gi|209945768|gb|ACI97115.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 128/251 (50%), Gaps = 20/251 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y D+P SQ ++ DV +L S SLGI+A+S+GLVAG L L
Sbjct: 75 TVRGLYY----DNPLLVRSQSRIAEARLDVCRMLRTSPLSLGILAASKGLVAGDLRLLMT 130
Query: 150 NQEVIDCSACGSSGYSISGDLSL---LEKLD-LKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
N +V+D S G G L+L EK+D ++T A ++++VEK + + L VF
Sbjct: 131 NGDVLDSSLYG-------GPLTLPTDPEKIDRIETLAEFVLIVEKESXXESLLSRNVFGT 183
Query: 206 IPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGM 263
ILIT KGYPD TR ++HRL L LVD +P G+ I+ ++ GS M
Sbjct: 184 FERRFILITGKGYPDCCTRRIVHRLTEE-NQLAAYILVDADPFGVEIMLVYRHGSKSMSF 242
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMV 322
+ ++W+GL ++ + + + L D + L++ L+ ++EL ++
Sbjct: 243 SSQGLTTPALRWIGLHPSEIPALGTGA-VALVAGDNKKINDLLARHDLEPGVRQELRMLQ 301
Query: 323 HNGQRAEVEAL 333
+AE+E++
Sbjct: 302 DVQLKAEIESV 312
>gi|159464146|ref|XP_001690303.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158284291|gb|EDP10041.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 1873
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 34/231 (14%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS 165
F S VN + DV ALL + G+V ++ L + G +G
Sbjct: 886 FASVRDVNAAVSDVAALL-----AFGLVFTTPTPTPPPASL-----------STGPAGRP 929
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+ GDL+ + +L L+ A Y +P +L+TAKG PDIATR
Sbjct: 930 LPGDLTAIGRLGLQLTAGYGGGG----------------GVPCVLVTAKGVPDIATRAFA 973
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
RL FP + + LVD+NPAG+ IL T+K+GS MG E + ++WLG+RG +
Sbjct: 974 ARLAATFPGMQPVGLVDFNPAGVVILATYKYGSDRMGPEGRAHPLPRLRWLGVRGRHLAG 1033
Query: 285 IPEQSLLPLKPRDLQIARSLMSS-EILQENYKEELSLMVHNGQRAEVEALY 334
+ E L L RD + RSL + + EL M G + ++EALY
Sbjct: 1034 VGEAHLQRLTARDTALIRSLRERLSAAEPGWVAELDAMEQAGYKGDIEALY 1084
>gi|443898367|dbj|GAC75702.1| catalytic subunit of the meiotic double strand break transesterase
[Pseudozyma antarctica T-34]
Length = 347
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 31/357 (8%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWI---FLSHSFCT 57
V ARI+ V + L L A++ PL + S +RV++ D S F T
Sbjct: 12 VLARIDALVADLLHQLAGQLDAVNPAPL---RLSTTRVAEPSEHDDSAAQRKVRPVMFPT 68
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+ + +VRV +V++ + R+++Y C E F +Q + ++
Sbjct: 69 RASSGVRRFAQYVRVLEVVQANLLAGRATTKRAHRDVYYS--CS--EVFDTQRASDLVVE 124
Query: 118 DVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD 177
+ LL C+R +LG+VAS+RGLV+G + L+ P+ + S G + I D+S +
Sbjct: 125 RLAQLLGCTRGALGVVASTRGLVSGSMHLRSPDGRAVH-SVRGET-QRIPADMSAAWSVH 182
Query: 178 LKT--DAR--YIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
L D R ++VVEK +FQRL + + + + I++TA GY D AT L+ RL A P
Sbjct: 183 LTCPEDCRGHVVLVVEKACVFQRLLDLQLGSDL--IVVTACGYADAATLELV-RLLAAAP 239
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEA-YRYACNVKWLGLRGDDVQLIPEQSLLP 292
PAG+ + F G+ + YR A ++WLG+ D+ L P+
Sbjct: 240 ----------CPAGVRVCGLFDGDPYGVDIHMHYRAATPIQWLGVDADEFDLAPQTHTAL 289
Query: 293 LKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKI 349
+ R L ++E ++ L+ M+ +G + +++A Y LG YI K+
Sbjct: 290 RADERTKAMRLLRHPSPVRETHRRRLTSMLLDGYKVQIDAAYT-WTGGLGAYIQHKL 345
>gi|392577766|gb|EIW70895.1| hypothetical protein TREMEDRAFT_61408 [Tremella mesenterica DSM
1558]
Length = 562
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 38/263 (14%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG---RLM 145
+T+R+++YK + F +Q V++ + D++A R + AS++GL + RL+
Sbjct: 282 MTKRDIYYKDVG----LFKTQAVVDKLVDDLVATAGLKRRDFNVCASAKGLASSSSLRLV 337
Query: 146 LQEPNQEVIDCSACGSSGYSISGDLSLLEKLD-LKTDARYIIVVEKHA-IFQRLTEDFVF 203
L+ Q V+ S + EK+ L +++V+EK + +L ED
Sbjct: 338 LKNGEQIVLSPSTASL--------IPPAEKVQALVGKVEWVLVIEKDTCLGMKLLEDNGL 389
Query: 204 NQIPSILITAKGYPDIATRFLLHRLNRAFPD--LPILALVDWNPAGLAILCTFKFGSIGM 261
P +L+T KGYPD+AT LLH + FP + ALVD +P GL IL + +GS
Sbjct: 390 G--PGMLVTGKGYPDLATIQLLHLASETFPKQVVKFHALVDADPHGLDILSVYTYGS--- 444
Query: 262 GMEAYRYACN---------VKWLGLRGDD--VQLIPEQSLLPLKPRDLQIARSLMSSEIL 310
EA RY+ ++WLG++ D + LL L +D+Q A S++ S+I
Sbjct: 445 --EATRYSVEHADLALGERLQWLGVKASDWISAGVAYDDLLELTDKDVQKAMSMLRSDIP 502
Query: 311 QENYKEELSLMVHNGQRAEVEAL 333
E +K EL+ M+H ++AE++ +
Sbjct: 503 SE-WKRELAHMLHLNRKAEIQVI 524
>gi|425773684|gb|EKV12019.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum Pd1]
gi|425775995|gb|EKV14234.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum PHI26]
Length = 386
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 147/293 (50%), Gaps = 30/293 (10%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
++ A F + +++ Q + + +++R+++Y PE+F Q V+ + D+
Sbjct: 85 AHEAWKFTVILRILAILDQAIRTGQLISKRDIYYI----DPEFFRVQYIVDHIVDDLAYT 140
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
+ +R +L + A+++GLV G L + +ID + S+ + +K+D+ +
Sbjct: 141 IGVNRTALNVEAAAKGLVTGDYRLIRGSHILIDAHSVIED--SLIPRIENGDKIDI-SRI 197
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRL-------NRAF 232
R+++V+EK A+F RL + I++T KGYPD TR L + +R+
Sbjct: 198 RWVLVIEKEAVFHRLARISYHTRALAGEGIMVTGKGYPDFMTRTFLRAISDSASKQSRSQ 257
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPE---- 287
P AL D +P G+AI+ T+K+GS + R + ++WLGLR D+ +PE
Sbjct: 258 PRF--YALTDGDPHGMAIMSTYKYGSAAHLHQNARLSIPRLQWLGLRVTDIIAVPEVLGD 315
Query: 288 QSLLPLKPRDLQIARSLM------SSEILQENYKEELSLMVHNGQRAEVEALY 334
+LL L +D + +++ +S+ + ++ EL M+ +AE+E LY
Sbjct: 316 TALLSLTMQDRKKIMAMLRNSPVWASDGPEPEWRAELQRMMILNLKAEIEILY 368
>gi|82596810|ref|XP_726415.1| topoisomerase VIA [Plasmodium yoelii yoelii 17XNL]
gi|23481817|gb|EAA17980.1| putative topoisomerase VIA [Plasmodium yoelii yoelii]
Length = 205
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 118/197 (59%), Gaps = 9/197 (4%)
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
G I+ +L ++K++ + A YI+VVEK++++Q+L E ++N +P ILIT KG+PD ATR
Sbjct: 13 GLMINDNLLNVDKVE--SLAHYILVVEKYSLYQKLCEKKIWNILPLILITGKGFPDYATR 70
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD 281
+++ L F + + D++P G+ I ++K G + + YAC ++KW+G+ +D
Sbjct: 71 KIIYELISLF-HFECVYVGDYDPYGIRIYLSYKEGC--KNNQNFVYACKDMKWVGMCFND 127
Query: 282 VQLIPEQSLLPLKPRDLQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYD 339
+ P++SLL L ++ + +L++ + L + K E+S M + E+EA + G +
Sbjct: 128 INFFPKESLLSLSMKEKHVIENLLNDKKLYYSSKLRTEISEMNEKNIKFEIEAFEYVGME 187
Query: 340 YLGK-YIAKKIVQADYI 355
+ K Y+ KKI++ ++
Sbjct: 188 FFVKNYLIKKILRKQWL 204
>gi|300176283|emb|CBK23594.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSG 163
+ F++Q + + +IQD IALL R +LGI A+S+G V GRL P +E +
Sbjct: 11 QIFSAQRECDDSIQDCIALLRVPRDALGISATSKGYVTGRLFYY-PKEEGVWYDMTMEKP 69
Query: 164 YSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRF 223
+SI+ D+ + L++K+DA++I+VVEK IF+RL ED F+ +P ++IT +G+PDIATR
Sbjct: 70 HSITYDM--INSLEVKSDAQFILVVEKDGIFKRLYEDRFFDILPCVIITGRGFPDIATRA 127
Query: 224 LLHRLNRAFPDL 235
H L F L
Sbjct: 128 FTHFLAVFFSRL 139
>gi|154334835|ref|XP_001563664.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060686|emb|CAM37701.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 653
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 75/272 (27%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
TQR+++Y L+ + +Q+ VNRT++ + +L R +G+ A RG +AG L +
Sbjct: 153 TTQRDVYYHLV----RHIPTQVVVNRTVKQLSRVLRLPRQLMGVTAGGRGYIAGWLSYRG 208
Query: 149 -------PN--------------------QEVIDCSACGSS---GYSI------------ 166
P QE+ +C+A + G+S+
Sbjct: 209 VSLQGGGPGAAAEEGMPLPLLSTDLVVSVQEIAECTAAENEEEHGFSVLLSSPISMLRSR 268
Query: 167 ------SGDLSLLEKLDLK----TDARY-----------IIVVEKHAIFQRLTEDFVFNQ 205
S L+ + DL TDA I+VVEKHA+F +L + +
Sbjct: 269 SPQQSASSRLTAAQHRDLTSCSATDAAATGFQVSPAVCAILVVEKHAVFAQLLREGLPRL 328
Query: 206 IPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI------ 259
+P +L+T++G+P A R LL L+ A P P++ LVD+NP GLAIL +++ +
Sbjct: 329 LPCVLLTSQGFPTYAARQLLAHLHTALPRAPVIGLVDYNPHGLAILAAYRWATASDALTA 388
Query: 260 -GMGMEAYRYAC-NVKWLGLRGDDVQLIPEQS 289
ME + Y N++WLG+R V + E++
Sbjct: 389 GSASMERHYYVVPNLRWLGVRTAHVSRVMEKT 420
>gi|312089432|ref|XP_003146245.1| type IIB DNA topoisomerase [Loa loa]
gi|307758593|gb|EFO17827.1| type IIB DNA topoisomerase [Loa loa]
Length = 359
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 36/257 (14%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+R+LFY + F Q +N +I LL +++S GLV G+L +
Sbjct: 95 TKRDLFY----EQKNLFGEQRNLNSSINRTCCLLGIDPTPGYLLSSGHGLVIGQLKI--- 147
Query: 150 NQEVIDCSACGSSGYSISGDLSL-------LEKLDLKTDARYIIVVEKHAIFQRLTEDFV 202
CGS+G + D SL + L T A+ I+VVEK AIFQ+L +
Sbjct: 148 ---------CGSTG---TVDCSLKATIIDDFSRASLFTTAQCILVVEKDAIFQKLIGEGF 195
Query: 203 FNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGM 261
P ++L+T +GYPDIATR +L +L+ +LP+ L+D +P G+ I T+K+G+
Sbjct: 196 LELFPNALLVTGRGYPDIATRIMLKKLS----NLPLFGLLDCDPHGIEIAMTYKYGNCSK 251
Query: 262 GME-AYRYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQENYK--E 316
+ R + +W+GL + +I LPL+ R+L L + N E
Sbjct: 252 KFDVGNRTLSHFEWIGLSRCKLPKFVISAVQFLPLQKRELAKLEKLCQRAAILGNAALFE 311
Query: 317 ELSLMVHNGQRAEVEAL 333
EL M G + E+EA+
Sbjct: 312 ELIRMRQCGNKLELEAV 328
>gi|156937842|ref|YP_001435638.1| DNA topoisomerase VI subunit A [Ignicoccus hospitalis KIN4/I]
gi|156566826|gb|ABU82231.1| DNA topoisomerase (ATP-hydrolyzing) [Ignicoccus hospitalis KIN4/I]
Length = 380
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 167/364 (45%), Gaps = 33/364 (9%)
Query: 14 KILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVW 73
KI +PA L +++R +N +D + R AK F
Sbjct: 27 KIRKGEEPA---LEILSRTKANVVYD----SDKKMLMPGERTILRKFLDKGEAKKFTNTL 79
Query: 74 KVMETCFQILSQEKRVTQRELFYK-----LLCD------SPEYFTSQLQVNRTIQDVIAL 122
+ ++ L ++ T R+L+Y+ + D + Q + + I DV
Sbjct: 80 LMASLIYEALLNDEYPTIRDLYYRGKHTIIYRDLRGRKREENTWDEQKESDALIVDVEVY 139
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
R + I++ +G V G + ++ + +VID S G Y+I L++ +D+ +A
Sbjct: 140 TGMLREEMLILSKEKGKVVGDMRIRSGD-DVIDLSKMGHGAYAIEPTPDLIDFIDV--NA 196
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
Y++V+EK A+FQ+L + + ILI+ G PD ATR + RLN LP+ L D
Sbjct: 197 EYVLVIEKDAVFQQLHRIKFWQRNNCILISTSGQPDRATRRFIRRLNEEL-GLPVYVLTD 255
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV----QLIPEQS---LLPLK 294
+P G I + GSI + E+ R A N K+LG+ DV L P++ ++ K
Sbjct: 256 ADPYGWYIFSVIRSGSINLSFESERLATPNAKFLGVSMSDVFEKNWLSPKERKNVIIVAK 315
Query: 295 PRDLQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQ 351
RD++ A +M E + + K EL L + ++ E+EAL G +L + Y+ +KI
Sbjct: 316 DRDIKRAYEMMKYEWFKNSPKWMHELKLFLKEKKKLEIEALAVKGLKFLAEVYLPQKIQT 375
Query: 352 ADYI 355
D+I
Sbjct: 376 KDWI 379
>gi|424814408|ref|ZP_18239586.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
gi|339758024|gb|EGQ43281.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
Length = 376
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 27/325 (8%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----EYF 106
L S+ TR + A+ F++ V +++ + + RE++Y+L P F
Sbjct: 58 LGDSYSTRKFLNISHARKFMQTTLVANKTKELVENGRTASIREVYYQLKHSVPGLDENTF 117
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
Q + N + D+ R L + A +G + G + + + + IDC A G+SG +I
Sbjct: 118 EDQDESNNVVVDIETATGAIREDLHLFAEPKGRLFGPITINDSG-DSIDCMAMGTSGLAI 176
Query: 167 SGDLSLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
S+++ + + A +I+VVE A+ RL E+ + ILI G P R L+
Sbjct: 177 P---SIVDHYEFEEHSADFILVVETSAMVNRLVEEDFHKEHNVILIGTGGQPARGARRLI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
+ ++ DLP+ D +P G I K GS+ + ++ R A + K +G+ +D+
Sbjct: 234 NIMHNRL-DLPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAKLIGMTMEDIDA 292
Query: 285 I------------PEQSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVE 331
PE S P K D + R +M E +Q++ ++ + M+ G R E +
Sbjct: 293 YDLHHVTEDLKGKPEDSGGPTK--DFKRIRDVMDYEWMQKDEWQNQFQKMLDKGVRVEQQ 350
Query: 332 ALYFHGYDYLG-KYIAKKIVQADYI 355
AL ++ +Y+ KKI Q ++
Sbjct: 351 ALASQSLQFVANEYLPKKIEQDQFL 375
>gi|195028295|ref|XP_001987012.1| GH20206 [Drosophila grimshawi]
gi|193903012|gb|EDW01879.1| GH20206 [Drosophila grimshawi]
Length = 334
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 145/271 (53%), Gaps = 19/271 (7%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T R L+Y+ P+ SQ + DV +L+ S LGI ++++GL++G + L
Sbjct: 78 TVRGLYYQ----DPQTIRSQSYIVAAKLDVCRMLNTSPVYLGIRSAAKGLISGDIKLIMS 133
Query: 150 NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQ--I 206
N +V+D + CGS + D +E+++ T+A +++VEK ++F+ L F+ +
Sbjct: 134 NGDVMDGNVYCGS--IMLPTDYENVERIE--TNAEMVLIVEKESVFESLLSCNAFSTFGL 189
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY 266
IL+T KGYPD TR +++RL+ +LP LVD +P G+ I+ +++GS M + +
Sbjct: 190 RFILVTGKGYPDCTTRRIVYRLSVEC-NLPAYILVDADPFGIEIMLVYQYGSQAMSLFSS 248
Query: 267 RYACNV-KWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNG 325
A + +W+GL ++ I +++ +PL D + ++S + ++EL +
Sbjct: 249 GLATPMLRWIGLHPTEIDSISKRA-VPLSNYDNKKLIDMLSRSNISVGVRQELCRLQQTQ 307
Query: 326 QRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+AE+E++ D+L YI KI + Y+
Sbjct: 308 LKAEIESV----IDFLSPYYIPTKINRNLYL 334
>gi|374636729|ref|ZP_09708283.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
gi|373558021|gb|EHP84388.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
Length = 365
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 150/303 (49%), Gaps = 17/303 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT S A K F + K++E Q+L T RE +Y F Q N I+
Sbjct: 61 RTLTVSQA-KIFAQTVKMLEFSKQLLDSNDFSTLREAYYVSKNWGEARFDDQQPSNNVIE 119
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAG--RLMLQEPNQEVI--DCSACGSSGYSISGDLSL 172
D+ A L R LG + G V G R++ + P E I DC+ G+ Y+I D++
Sbjct: 120 DLEAALDVLREDLGFIPEEDGSSVVGPLRIIDRTPEGEEIKVDCTRLGTGAYNIPNDVTR 179
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
LE +T+A +I+ +E +F RL + +++ IL++ KG P ATR + RLN +
Sbjct: 180 LE---FETNADFILAIETAGMFARLNAEKFWDKHNCILVSLKGVPARATRRFVKRLNEEY 236
Query: 233 PDLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSL 290
++P+L D +P G L I T K GS A + A + + +G+ D+ + +
Sbjct: 237 -EVPVLVFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAIPSARLIGVTPQDI-VDYDLPT 294
Query: 291 LPLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIA 346
PLK +D++ I L + + ++ +++ L M+ RAE ++L +G Y + Y+
Sbjct: 295 HPLKEQDIKRIKDGLKNDDFVKSFPEWQKALKQMLDMKVRAEQQSLAKYGLKYVVDTYLP 354
Query: 347 KKI 349
+KI
Sbjct: 355 EKI 357
>gi|393245080|gb|EJD52591.1| DNA topoisomerase IV, alpha subunit, partial [Auricularia delicata
TFB-10046 SS5]
Length = 300
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 37/280 (13%)
Query: 72 VWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG 131
+++V+E L V++R+++Y+ + F +Q + + D+ A +R L
Sbjct: 3 LFRVIELSHAGLLDGVSVSKRDIYYQDIA----LFQAQATL---VDDLAATCGVARSDLH 55
Query: 132 IVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGD---------LSLLEKLDLKTDA 182
I A+ +GL G + S SG I+G + ++ + L +
Sbjct: 56 IEAACKGLWCG-----------VGLSMISRSGSVIAGQHNEPTLIPVQTDIQSIQLADEV 104
Query: 183 RYIIVVEKHAIFQRLTEDFV--FNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+++VVEK A+FQ L V + +P ILIT KGYPD+ATR L+ L+R F +P+L
Sbjct: 105 AWVLVVEKDAVFQTLCRAGVTTYPTLPGHGILITGKGYPDVATRDLVAALSR-FTTVPLL 163
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRY-ACNVKWLGLRGDDVQL--IPEQSLLPLKP 295
ALVD + G+ I +K+GS + E R A ++W+G+ D+ I + LLPL
Sbjct: 164 ALVDADAHGVDIFSCYKYGSRSLQHEQDRLQALRLEWIGVWSTDLNRLGIDKNELLPLSA 223
Query: 296 RDLQIARS-LMSSEILQEN-YKEELSLMVHNGQRAEVEAL 333
DL+ A S L+S +QE ++ EL M+ ++AEVE L
Sbjct: 224 HDLKKAISLLLSPNCVQEPLWRRELMHMIRFRRKAEVEIL 263
>gi|225683482|gb|EEH21766.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 378
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 51/271 (18%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
++R+++Y P YF SQ V+R I D+ + R +L + A+++GL GR +
Sbjct: 115 SKRDIYYL----DPVYFGSQSVVDRCIDDLACTIGVDRSALHVAAAAKGLAVGRFNVTLN 170
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQI-- 206
+ ID G + + ++ +DL R+I+V+EK A F+RL T ++
Sbjct: 171 DNSTIDADLHAEVGMLVP-RVETVKNVDLSA-VRWILVIEKEATFRRLATVNYHKTSAAG 228
Query: 207 PSILITAKGYPDIATRFLLHRLNRAFP-----------DLPILALVDWNPAGLAILCTFK 255
P I+IT KGYPD+ TR L L+ P PI VD +P G+AI+
Sbjct: 229 PGIMITGKGYPDLCTRAFLRLLSHTLPLPSALGTSPSSPPPIYMFVDSDPDGMAII---- 284
Query: 256 FGSIGMGMEAYRYACNVKWLGLRGD------DVQLIPEQSLLPLKPRDLQIARSLMSSEI 309
+++W GLR D + + L+PL RD + A+ +++
Sbjct: 285 ---------------DIQWFGLRSSEVVSRLDAHIQDDDVLIPLTLRDRKKAQDMLARNP 329
Query: 310 L------QENYKEELSLMVHNGQRAEVEALY 334
+ + ++ EL M+ + +AE+E LY
Sbjct: 330 VFAEDGPEPTWRAELQHMLMSNVKAEIEVLY 360
>gi|317148419|ref|XP_001822758.2| meiotic recombination protein spo11 [Aspergillus oryzae RIB40]
Length = 395
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 150/308 (48%), Gaps = 37/308 (12%)
Query: 52 SHSFCTRSLTKSNAAKA--FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQ 109
+ ++ T S +N +A F V++V+ + V++R+++Y P F +Q
Sbjct: 78 TDTYITYSWPGANTFEAWKFTVVFRVLAVVADAIGTGVVVSKRDIYYS----DPACFGTQ 133
Query: 110 LQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVID----CSACGSSGYS 165
V+ + D+ + R +L + A+++GLVAG L + E +D C
Sbjct: 134 RIVDTIVDDLAYTIGVDRSALNVEAAAKGLVAGYCSLLTKSGETMDVQLPAKDCLVPSSQ 193
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS---ILITAKGYPDIATR 222
+L++ +DA +++++EK AI++RLT + + ILIT KGYPD++TR
Sbjct: 194 DDRELNI-------SDASWVLIIEKEAIYRRLTRSNYHTRAAAGKGILITGKGYPDLSTR 246
Query: 223 FLLHRL----NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY--ACNVKWLG 276
+ +L R+ L LVD +P G+AI+ +K+GS+ + R C + WLG
Sbjct: 247 AFIRKLYENSRRSDKALRFYGLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPC-LWWLG 305
Query: 277 LRGDD-VQLIP---EQSLLPLKPRDLQIARSLMS------SEILQENYKEELSLMVHNGQ 326
LR D V P +++L L RD +++S +E + ++ EL M+
Sbjct: 306 LRTSDVVSGAPSNDDRALNRLTVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNL 365
Query: 327 RAEVEALY 334
+AE+E LY
Sbjct: 366 KAEIEILY 373
>gi|310799353|gb|EFQ34246.1| type IIB DNA topoisomerase [Glomerella graminicola M1.001]
Length = 420
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 23/239 (9%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
+ A F R+ ++++ L + +T+R ++Y+ F Q V+ + D+ L
Sbjct: 103 HEATKFSRLMRILQMSLCTLMAGRTITKRNIYYQ----DENLFKKQSVVDNLVDDLAYTL 158
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL--------LEK 175
R LGIVA+ +GLVAG ++++ S+ S + + +
Sbjct: 159 GLGREDLGIVATGKGLVAGPILIRTKTHHAFHSSSEAPPNLDASSSATGVLIPPARDISQ 218
Query: 176 LDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP---SILITAKGYPDIATRFLLHRLNRAF 232
+D AR+++ A F+ L ++ IL+T KGYPD+ T+ LH ++
Sbjct: 219 IDFGR-ARWVL-----ATFRTLAAARYWDASACGSGILVTGKGYPDLLTKQFLHLIHDVK 272
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLL 291
P+LPI+ALVD++ G+AI+ + GS G E ++ WLG++ D L P+ SLL
Sbjct: 273 PELPIMALVDYDSDGIAIMRCYSHGSRGHAHERNTVVPSMSWLGIKSGD--LAPQSSLL 329
>gi|402217236|gb|EJT97317.1| DNA topoisomerase IV alpha subunit, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 248
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 21/252 (8%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGR-LMLQE 148
T R++FY+ P F +Q ++ I + LL R +L I AS RG+ AG + L
Sbjct: 7 TLRDVFYR----DPSLFDNQGVSDKLIDLLSELLGEKRGALNIRASPRGMFAGSAITLLL 62
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA-IFQRLTEDF--VFNQ 205
+ E I SA + D+ E++D++ D +++VVEK + R+ +F++
Sbjct: 63 KSGEEITASATRGQTIPVEEDI---ERIDVRDDISFVVVVEKEVRTYTRVHGKSLKIFSR 119
Query: 206 IPSILITAKGYPDIATRFLLHRLNRAFPD-LPILALVDWNPAGLAILCTFKFGSIGMGME 264
+ KGYPD+ATR L RL + P +PI LVD +P GL IL F G E
Sbjct: 120 PLLNGLQGKGYPDLATRDLFKRLAQDLPPWVPITVLVDADPYGLDILNQFVKACDGQAGE 179
Query: 265 AYRYACNVKWLGLRGDD-VQL-IPEQSLLPLKPRDLQIA-RSLMSSEILQENYKEELSLM 321
V+W+G+ G + +L I Q LLPLKP D + A + L + L ++EEL M
Sbjct: 180 ------RVQWIGVFGTEWTELGIEPQQLLPLKPTDCRKAFKMLRETPDLPSRWREELQHM 233
Query: 322 VHNGQRAEVEAL 333
+ ++AE+E L
Sbjct: 234 LFLQRKAEIECL 245
>gi|323139266|ref|ZP_08074320.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
gi|322395487|gb|EFX98034.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
Length = 377
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 23/309 (7%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+LT N A++F ++ ++M ++ T+RE +Y F Q + + +
Sbjct: 67 RTLT-VNTARSFAQMLRLMAASRTMVESNDFATKREAYYISKNWGDCRFDEQAESDAIMD 125
Query: 118 DV--IALLHC-SRFSLGIVASSRG-LVAGRLMLQEPNQEV-----IDCSACGSSGYSISG 168
D+ IA H SR +L S G VAGR+++ + N IDC+ GS Y+I
Sbjct: 126 DIEAIASRHGLSRENLRFYPESHGGSVAGRVVIVDRNAVTGEPIEIDCANLGSGAYTIP- 184
Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
E L +TDAR+I+ +E +FQRL + +++ G P ATR + RL
Sbjct: 185 --RSAEHLRFRTDARFILAIETGGMFQRLNNHRFWESARCVIVEMGGVPTRATRRFI-RL 241
Query: 229 NRAFPDLPILALVDWNPAGLA-ILCTFKFGSIGMGMEAYRYAC--NVKWLGLRGDD-VQL 284
DLP+ VD +P G I T K GS G R+ C ++LG+ D +
Sbjct: 242 LSDRHDLPVYCFVDCDPYGFTNIYRTLKAGS-GNAAHVNRFLCVPRARFLGVTPQDIIDF 300
Query: 285 IPEQSLLPLKPRDLQIARSLMSSE---ILQENYKEELSLMVHNGQRAEVEALYFHGYDY- 340
+ + PL P D++ A+ +S++ I + + ++ G RAE +AL G +Y
Sbjct: 301 GLQDATHPLTPVDVKRAKDALSNDPFIIAHPQWTAAIRQLLDMGVRAEQQALAKWGLNYV 360
Query: 341 LGKYIAKKI 349
+ +Y+ +K+
Sbjct: 361 IDEYLPRKL 369
>gi|45359000|ref|NP_988557.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis S2]
gi|45047875|emb|CAF30993.1| DNA topoisomerase VI A [Methanococcus maripaludis S2]
Length = 419
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 16/297 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K+ME +L T RE +Y F Q N I+D+ A
Sbjct: 120 NQAKIFAQTIKMMEFSKGLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAAS 179
Query: 124 HCSRFSLGIVASSRGL-VAGRLML----QEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
R LG + G V G L + E ++ IDC+ GS YSI D++ KL+
Sbjct: 180 EFLREDLGFIPEEDGAAVIGPLRIVDRTAEGDEIKIDCTKLGSGAYSIPNDVT---KLEF 236
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+T A +I+ +E +F RL + + + ILI+ KG P ATR + RLN + LPIL
Sbjct: 237 ETKADFILAIETAGMFARLNAEGFWKKHNCILISLKGVPARATRRFIKRLNEEYK-LPIL 295
Query: 239 ALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPR 296
D +P G L I T K GS A + A + +G+ D+ + E PLK
Sbjct: 296 VFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDI-VDYELPTHPLKDH 354
Query: 297 DLQIARSLMSSEILQENY---KEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
D++ + + ++ +++ + L M + RAE ++L +G Y + +Y+ K+
Sbjct: 355 DIKRLKDGLKNDDFVKSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKV 411
>gi|340624748|ref|YP_004743201.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
gi|339905016|gb|AEK20458.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
Length = 365
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 16/297 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K+ME +L T RE +Y F Q N I+D+ A
Sbjct: 66 NQAKIFAQTIKMMEFSKGLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAAS 125
Query: 124 HCSRFSLGIVASSRGL-VAGRLML----QEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
R LG + G V G L + E ++ IDC+ GS YSI D++ KL+
Sbjct: 126 EFLREDLGFIPEEDGAAVIGPLRIVDRTAEGDEIKIDCTKLGSGAYSIPNDVT---KLEF 182
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+T A +I+ +E +F RL + + + ILI+ KG P ATR + RLN + LPIL
Sbjct: 183 ETKADFILAIETAGMFARLNAEGFWKKHNCILISLKGVPARATRRFIKRLNEEY-KLPIL 241
Query: 239 ALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPR 296
D +P G L I T K GS A + A + +G+ D+ + E PLK
Sbjct: 242 VFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDI-VDYELPTHPLKDH 300
Query: 297 DLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
D++ + L + + ++ ++ L M + RAE ++L +G Y + +Y+ K+
Sbjct: 301 DIKRLKDGLKNDDFVKSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKV 357
>gi|327300939|ref|XP_003235162.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
gi|326462514|gb|EGD87967.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
Length = 387
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 173/345 (50%), Gaps = 49/345 (14%)
Query: 21 PAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWK--VMET 78
P+IS + R+S++S + L T L S R+ T S K+ W+ V+
Sbjct: 43 PSIS----MKRRSNHSGYNLNLRTGA----LESSDEVRTYTYSWPGKSAQEGWRFGVLTR 94
Query: 79 CFQILSQEKR----VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
++S+ + ++R++FY+ P YF SQ V+R I D+ L SR +L + A
Sbjct: 95 ILGLISEAIKGGFISSKRDIFYQ----DPVYFGSQRLVDRYIDDIAFTLDVSRAALHVAA 150
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
+++G + G + + I AC + G I + ++++D+ + +I+V+EK A+F
Sbjct: 151 AAKGAIGGNFSITMKSGSSIQVGAC-TEGIVIP-RIHEVKEIDI-SGISWILVIEKEAVF 207
Query: 195 QRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRLNRA--------FPDLPILALVDW 243
RL N + IL+T KGYPD+++R L L+R F LPI LVD
Sbjct: 208 HRLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMIFNPLPIFILVDS 267
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYA----CNVKWLGLRGDDVQLIPEQ----SLLPLKP 295
+P G+AI+ T+K+GS+ + +R A +++W+GL+ ++ SL+P+
Sbjct: 268 DPDGMAIMSTYKYGSMA---QVHRNADLNVPSIQWVGLQASEMMSAASHTNMPSLVPMSQ 324
Query: 296 RDLQIARSLM------SSEILQENYKEELSLMVHNGQRAEVEALY 334
D + A +++ + + + +++EL M+ +AE+E LY
Sbjct: 325 HDRKKAEAMLKRNPSFAEDGPEPAWRKELQSMLVMNLKAELEILY 369
>gi|390601971|gb|EIN11364.1| DNA topoisomerase IV alpha subunit, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 199
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 39/225 (17%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
++ V+ + + + + VT+R+++Y+ + F +Q V+R + D+ A SR
Sbjct: 1 LAQLMSVLSSIHEAVVTDMPVTKRDIYYQDI----NLFRTQSTVDRLVDDIGATFEVSRA 56
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL---------LEKLDLK 179
L + AS +GL G + SG I+G+ S + + +
Sbjct: 57 QLNVRASPKGLFLGSGLTMHL-----------VSGLPITGNDSEATIVPQNEDISRCVVD 105
Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP-DLPIL 238
+D R+++++EK A R T + KGYPD+ATR L+++L P ++PIL
Sbjct: 106 SDVRWVLILEKEA-SSRCT------------LGGKGYPDVATRKLVNQLANDLPTNVPIL 152
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDV 282
ALVDW+P G+ IL T+K GSI M E A + V+WLG+ DV
Sbjct: 153 ALVDWDPHGIDILLTYKLGSISMLHEKDTLAASRVQWLGIYSSDV 197
>gi|134045187|ref|YP_001096673.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C5]
gi|132662812|gb|ABO34458.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanococcus
maripaludis C5]
Length = 365
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 16/297 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K+ME ++L T RE +Y F Q N I+D+ A
Sbjct: 66 NQAKIFAQTIKMMEFSKELLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAAS 125
Query: 124 HCSRFSLGIVASSRGL-VAGRLMLQEP---NQEV-IDCSACGSSGYSISGDLSLLEKLDL 178
R LG + G V G L + + +E+ IDC+ GS Y+I D++ KL+
Sbjct: 126 EHLREDLGFIPEEDGAAVIGPLRIADKTADGEEIKIDCTKLGSGAYNIPNDVT---KLEF 182
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+T A +I+ +E +F RL + + + ILI+ KG P ATR + RLN LPIL
Sbjct: 183 ETKADFILAIETAGMFARLNAEEFWKKHNCILISLKGVPARATRRFIKRLNEEHK-LPIL 241
Query: 239 ALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPR 296
D +P G L I T K GS A + A + +G+ D+ + E PLK
Sbjct: 242 VFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPESRLIGVTPQDI-VDYELPTHPLKDH 300
Query: 297 DLQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
D++ + + ++ ++ E L+ M RAE ++L +G Y + +Y+ KI
Sbjct: 301 DVKRLKDGLKNDDFVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKI 357
>gi|367037763|ref|XP_003649262.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
gi|346996523|gb|AEO62926.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
Length = 418
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 27/216 (12%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F +++++E L +T+R ++Y+ +PE F SQ V+ + ++ L R
Sbjct: 115 FEALFRIIELSHAALLSGHVITKRNIYYQ----NPELFRSQSAVDNMVDNLAFTLGVGRE 170
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
L IVA+++GLV+G + L + + C +G + ++ + +++ + AR+++V+
Sbjct: 171 DLNIVAAAKGLVSGPIDLILCDGSIHSCDTSTDTGVLLPS-VASIRQINFRA-ARWLLVI 228
Query: 189 EKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGL 248
EK A KG+PD+ TR L L+ PDL I LVD++P G+
Sbjct: 229 EKEA---------------------KGFPDLTTRRFLCALHSIRPDLGISVLVDFDPDGV 267
Query: 249 AILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL 284
AI+ T+++GS +G E ++WLG+ DD+ L
Sbjct: 268 AIMRTYRYGSKRLGHEENVATPQLRWLGILSDDILL 303
>gi|389586277|dbj|GAB69006.1| type IIB DNA topoisomerase [Plasmodium cynomolgi strain B]
Length = 232
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 100/189 (52%), Gaps = 13/189 (6%)
Query: 71 RVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSL 130
R++ ++E + L T R++FY +P+ F SQ N T+ + ++ R L
Sbjct: 42 RLFCIIEIVSKNLKDNMHSTLRQIFYT----NPKLFMSQKVSNVTVGKLTKIIKIPRELL 97
Query: 131 GIVASSRGLVAGRLMLQEPNQEV-IDCSACGSSGYSISGDLSL---LEKLDLKTDARYII 186
I S +G++ G L L+E N +DC S + G L + +++ D +Y++
Sbjct: 98 NIYNSPKGIIRGNLFLREKNSSPWVDCM----SIFETRGHLICPFGVSDIEISPDVKYVL 153
Query: 187 VVEKHAIFQRLTE-DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
+VEK IF RL + DF+ N P I+ITA+G+PD+ TR LL+ + R L I L D++
Sbjct: 154 IVEKETIFFRLLQSDFISNYGPCIMITARGFPDLNTRQLLYEIRRCNKALKIFCLTDYDA 213
Query: 246 AGLAILCTF 254
GL+I T+
Sbjct: 214 YGLSIAFTY 222
>gi|389624895|ref|XP_003710101.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
gi|351649630|gb|EHA57489.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
Length = 466
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 133 VASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
A+ +GL+ G + + C + G +I +L + + + AR+++++EK A
Sbjct: 195 TAAGKGLIIGPISFVLNGGARVCCDNVRTEG-TIICSTEILGRFEFPS-ARWVLIIEKEA 252
Query: 193 IFQRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLA 249
F+ L + P +++T KGYPD++TR L++ L A P +PI +LVD++P G+
Sbjct: 253 TFRTLASSQFYRNSRAGPGVMVTGKGYPDLSTRNLVYCLREARPRIPIYSLVDYDPDGIR 312
Query: 250 ILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEI 309
ILCT+K+ S + E N++W+G+R D++ E L P LQ A S +++EI
Sbjct: 313 ILCTYKYSSSALEHERQSAVSNIQWIGIRLSDIK---EHHLRPCNS-VLQDAGSPVNTEI 368
>gi|159905619|ref|YP_001549281.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C6]
gi|159887112|gb|ABX02049.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C6]
Length = 365
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 139/297 (46%), Gaps = 16/297 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K+ME +L T RE +Y F Q N I+D+ A
Sbjct: 66 NQAKIFAQTIKMMEFSKGLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAAS 125
Query: 124 HCSRFSLGIVASSRGL-VAGRLMLQE---PNQEV-IDCSACGSSGYSISGDLSLLEKLDL 178
R LG + G V G L + + +E+ IDC+ GS YSI D++ KL+
Sbjct: 126 EYLREDLGFIPEEDGAAVIGPLRIVDRTADGEEIKIDCTKLGSGAYSIPNDVT---KLEF 182
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+T A +I+ +E +F RL + +++ IL++ KG P ATR + RLN LPIL
Sbjct: 183 ETKADFILAIETAGMFARLNAEGFWSKHNCILVSLKGVPARATRRFIKRLNEEHK-LPIL 241
Query: 239 ALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPR 296
D +P G L I T K GS A + A + +G+ D+ + E PLK
Sbjct: 242 VFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDI-IDYELPTHPLKDH 300
Query: 297 DLQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
D++ + + ++ +++ E L+ M RAE ++L +G Y + +Y+ K+
Sbjct: 301 DVKRLKDGLKNDDFVKSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKV 357
>gi|359417697|ref|ZP_09209781.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358031946|gb|EHK00766.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 376
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 27/325 (8%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----EYF 106
L S+ TR + A+ F++ V +++ + + RE++Y+L P F
Sbjct: 58 LGDSYSTRKFLNISHARKFMQTTLVASKAKELVDSGRTASIREVYYQLKHSVPGLDENTF 117
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
Q + N + D+ R L + A +G + G + + + + ID + GS+G +I
Sbjct: 118 EDQDESNNVVVDIETATGAIREDLHLFAEPKGRLFGPIKINDSG-DTIDGMSMGSAGMAI 176
Query: 167 SGDLSLLEKLDLK-TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
S+++ L+ + +A +I+VVE A+ RL E+ + +I+I G P R L+
Sbjct: 177 P---SIVDHLEFEENNADFILVVETSAMVNRLVEEDFHEEHNAIIIGTGGQPARGARRLI 233
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
+ ++ +LP+ D +P G I K GS+ + ++ R A + K +G+ +D++
Sbjct: 234 NMMHNEL-ELPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAKLIGMTMEDIEE 292
Query: 285 I------------PEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVE 331
PE S P K D + +M E +Q + ++++L LM+ G R E +
Sbjct: 293 YGLEHVTEDLKGKPEDSGGPTK--DYKRIHDVMDYEWMQKKEWQKQLELMLDKGVRVEQQ 350
Query: 332 ALYFHGYDYLG-KYIAKKIVQADYI 355
AL + +++ +Y+ +KI ++
Sbjct: 351 ALAANSLEFVANEYLPEKIENETFL 375
>gi|150402606|ref|YP_001329900.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C7]
gi|150033636|gb|ABR65749.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C7]
Length = 365
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K+ME ++L T RE +Y F Q N I+D+ A
Sbjct: 66 NQAKIFAQTIKMMEFSKELLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAAS 125
Query: 124 HCSRFSLGIVASSRGL-VAGRLML----QEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
R LG + G V G L + + ++ IDC+ GS Y+I D++ KL+
Sbjct: 126 EYLREDLGFIPEEDGAAVIGPLQIVDRAADGSEIKIDCTKLGSGAYNIPNDVT---KLEF 182
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
T A +I+ +E +F RL + +++ ILI+ KG P ATR + RLN LPIL
Sbjct: 183 NTKADFILAIETAGMFARLNAEEFWSKHNCILISLKGVPARATRRFIKRLNEEHK-LPIL 241
Query: 239 ALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPR 296
D +P G L I T K GS A + A + +G+ D+ + E PLK
Sbjct: 242 VFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDI-VDYELPTHPLKDH 300
Query: 297 DLQIARSLMSSEILQENYKE---ELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
D++ + + ++ ++ E L+ M RAE ++L +G Y + +Y+ KI
Sbjct: 301 DVKRLKDGLKNDDFVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKI 357
>gi|68075775|ref|XP_679807.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500635|emb|CAH98047.1| conserved hypothetical protein [Plasmodium berghei]
Length = 268
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
+ + N R++ ++E + ++ T R++FY +P+ F SQ NRTI
Sbjct: 28 KKVISKNNIIEITRLYYIIEIILKNINDNIYTTLRQIFYT----NPQLFISQNISNRTIG 83
Query: 118 DVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN-QEVIDC-SACGSSGYSISGDLSLLEK 175
+ ++ R L I S +G++ G L+L+E N + IDC S + G+ IS
Sbjct: 84 KLTQIIKKPREILNIYNSPKGIIRGNLLLKERNLSDWIDCMSIFETRGHLISP----FGV 139
Query: 176 LDLK--TDARYIIVVEKHAIFQRLTE-DFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
LDLK T +Y++++EK +F +L + +F+F P ILITAKG+PDI TR L+H + +
Sbjct: 140 LDLKIATTVKYVLIIEKETVFFKLLQSNFIFKYGPLILITAKGFPDINTRQLIHEIQKKN 199
Query: 233 PDLPILALVDWNPAGL 248
L L D++ +
Sbjct: 200 KTLKFFCLTDYDAYDM 215
>gi|213407322|ref|XP_002174432.1| endonuclease Rec12 [Schizosaccharomyces japonicus yFS275]
gi|212002479|gb|EEB08139.1| endonuclease Rec12 [Schizosaccharomyces japonicus yFS275]
Length = 291
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 142/291 (48%), Gaps = 20/291 (6%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
AK +++++++ Q ++ + R+++Y + F Q V+ ++++ C
Sbjct: 13 AKRCAQMFRLVDLLHQAINNNTVLQLRDIYYHDV----GLFERQSTVDALVRELTRTFCC 68
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
SR L + A+ +GLV G + + +D +C S + I L + ++T A +
Sbjct: 69 SRSELHVTAAGKGLVYGPVTIHTK----LDTISCMSKPWIIQYSLDIQS---IRTSADTL 121
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
++VEK A F L + F + + +TAKG+PD++TR + + L DW+P
Sbjct: 122 VIVEKEATFHTLIDAFPLPNV--VFVTAKGFPDLSTRQFISLFVQETGVRRAYGLFDWDP 179
Query: 246 AGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLM 305
G++I +K+GS E ++ +G +D + + EQ +LP+ RD +IA +L+
Sbjct: 180 YGVSIYMCYKYGSSVTRNENMCTTKTLQPIGPFYEDFKQLDEQFMLPITTRDFRIASNLL 239
Query: 306 SS-EILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADY 354
+ LQE EL M+ ++AE++ G + +++KKI Q +
Sbjct: 240 RTIRPLQEPIVVRELQKMLFLARKAEIQ-----GIPNVKTWLSKKISQLPF 285
>gi|388580953|gb|EIM21264.1| DNA topoisomerase IV, alpha subunit [Wallemia sebi CBS 633.66]
Length = 290
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 25/196 (12%)
Query: 179 KTDARYIIVVEKHAIFQRLTE-DFVFNQIP--SILITAKGYPDIATRFLLHRLNRAFPD- 234
K+ +++VVEK +F L E F + + +I++T KGYPDIATR LL+ L P+
Sbjct: 36 KSQVSFVLVVEKETVFSALREIQFSRSSVHGHNIILTGKGYPDIATRDLLNHLANVIPEN 95
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLL 291
+P + LVD +P GL I T+KFGS M E + AC +K +GLR + L IP L
Sbjct: 96 VPFIGLVDSDPHGLRIFLTYKFGSENMQQEKLQMACPRLKLMGLRNAEFDLLCIPPNQAL 155
Query: 292 PLKPRDLQIARSLMS-------SEILQENYKEELSLMVHNGQRAEVEALY---------- 334
+ ++ I + ++ S + K+E+ MV ++ E+EALY
Sbjct: 156 SITKKEKTICKKMIQRLDLMDRSAFGVKELKDEIKQMVTYDRKFEIEALYSAPTPNGETV 215
Query: 335 FHGYDYLGKYIAKKIV 350
F G LG+YI K+
Sbjct: 216 FSG-QVLGEYIDSKLT 230
>gi|291333565|gb|ADD93260.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C82]
Length = 366
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 150/304 (49%), Gaps = 17/304 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R T +AK +R V+E ++++ K T RE++Y F+SQ + N +
Sbjct: 62 RDATSLGSAKQLLRALYVVEFIEEMINTNKSSTLREMYYISESWGLGKFSSQNESNNLAE 121
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQ--EVIDCSA---CGSSGYSISGDLS 171
D+ + C R + G + G + LQE N+ E + +A G SGY + ++
Sbjct: 122 DLEVVTKCLREDFKLRPEEDGARMIGNITLQERNRRGEWMRINARDDVGDSGYGVPYNVE 181
Query: 172 LLEKLDL-KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
EK++L + D ++I+ +E +F RL E+ L+ KG P +TR +L R++
Sbjct: 182 E-EKIELLEHDVKFIMAIETGGMFDRLIENGFDEAYNCALVHLKGQPARSTRRILKRMSE 240
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQL--IPE 287
+ DLP++ +D +P I + +G+I + Y +LG+ DD++ +P
Sbjct: 241 EW-DLPVVVFLDGDPWSFRIFASIAYGAIKTAHISEYLATPTATYLGITSDDIEAYDLPS 299
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYL-GKYI 345
L RD+ ++ +S + ++E++++M+ G++AE ++L +G D++ Y+
Sbjct: 300 DD---LSSRDVDALKAELSDPRFADAWWQEQINMMLELGKKAEQQSLAKYGLDFVTDTYL 356
Query: 346 AKKI 349
+K+
Sbjct: 357 PEKL 360
>gi|297620010|ref|YP_003708115.1| DNA topoisomerase [Methanococcus voltae A3]
gi|297378987|gb|ADI37142.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus voltae A3]
Length = 365
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 16/297 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N AK F + K+ME +L T RE +Y F Q N I+D+ A
Sbjct: 66 NQAKIFAQTIKMMEFSKSLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDLEAAS 125
Query: 124 HCSRFSLGIVASSRGL-VAGRLMLQEPNQE----VIDCSACGSSGYSISGDLSLLEKLDL 178
R LG + G V G L + + Q+ +IDC+ GS Y+I +++ L L
Sbjct: 126 DFLREDLGFMPEEDGASVVGPLKVIDKTQDGQEIIIDCTKLGSGAYNIPNEVT---NLTL 182
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+T A +++ +E +F RL+ + + + IL++ KG P ATR + RL LPIL
Sbjct: 183 ETTAEFVLAIETAGMFARLSAEGFWKKHNCILVSLKGVPSRATRRFVKRLAEE-KKLPIL 241
Query: 239 ALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPR 296
D +P G L I T K GS A + A + +G+ D+ + E PLK
Sbjct: 242 VFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDI-VDYELPTHPLKDH 300
Query: 297 DLQ-IARSLMSSEILQ--ENYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAKKI 349
D++ + L + + ++ ++++ L++M ++ RAE ++L +G Y + +Y+ KI
Sbjct: 301 DIKRLKDGLKNDDFVKSFSDWQQALTMMANSKVRAEQQSLAKYGLKYVVEEYLPAKI 357
>gi|146324038|ref|XP_747937.2| meiosis-specific topoisomerase Spo11 [Aspergillus fumigatus Af293]
gi|129556354|gb|EAL85899.2| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus Af293]
Length = 388
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 46/282 (16%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
V++R+++Y P F SQ V+ I D+ + R +L + A ++GLVAG L
Sbjct: 130 VSKRDIYYS----DPACFGSQQIVDTIIDDIAHTIGVDRAALNVEAVAKGLVAGYYRLMT 185
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS 208
E++D +L K ++++++EK A+++RL+ + +
Sbjct: 186 KTGEMVDA------------------RLSTKV-VKWVLILEKEAVYRRLSRSSYHTRAAA 226
Query: 209 IL-ITAKGYPDIATRFLLHRLNRAFPDLP------ILALVDWNPAGLAILCTFKFGSIGM 261
+ KGYPD++TR + RL LP ALVD +P G+AI+ T+K+GS+
Sbjct: 227 GKGVLGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALVDSDPDGMAIMSTYKYGSMAH 286
Query: 262 GMEAYRYACNVK---WLGLRGDDV----QLIPEQSLLPLKPRDLQIARSLMSSEIL---- 310
+ + NV WLGLR DV +++ + L RD + A +++S+ +
Sbjct: 287 AHDNEK--LNVSKLCWLGLRTSDVIGSADSFGDEAFIRLSLRDRKKAVAMLSNNPVWAED 344
Query: 311 --QENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIV 350
++ ++ EL M+ +AE+E LY + + L +I KK+
Sbjct: 345 GPEQEWRAELQQMLMLNLKAEIEILY-NRQEGLEGWINKKMT 385
>gi|326481332|gb|EGE05342.1| meiotic recombination protein spo11 [Trichophyton equinum CBS
127.97]
Length = 387
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 55/361 (15%)
Query: 9 VINFLKILNSPD--PAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAA 66
+++ ++ L+ PD P+IS + R+S++S + + T L S R+ T S
Sbjct: 29 LVSIVEELSKPDGTPSIS----MKRRSNHSGYNLNIKTGA----LESSDEVRTYTYSWPG 80
Query: 67 KAFVRVWK--VMETCFQILSQEKR----VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
K W+ V+ ++S+ + ++R++FY+ P YF SQ V+R I D+
Sbjct: 81 KTAQEGWRFGVLTRILGLISEAIKGGFISSKRDIFYQ----DPVYFGSQRLVDRYIDDIA 136
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
L R +L + A+++G G + N I AC + G I + +E +D+ +
Sbjct: 137 FTLDVDRAALHVAAAAKGATGGNFSITLKNGSSIQVGAC-TEGILIP-RIHEIEGIDI-S 193
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRLNR------- 230
+I+V+EK A+F RL N + IL+T KGYPD+++R L L+R
Sbjct: 194 GISWILVIEKEAVFHRLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSK 253
Query: 231 --AFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA----CNVKWLGLRGDDVQL 284
+ P PI LVD +P G+AI+ T+K+GS+ + +R A +++W+GL+ +
Sbjct: 254 MISSPP-PIFILVDSDPDGMAIMSTYKYGSMA---QVHRNADLNMPSIQWVGLQASKMMS 309
Query: 285 IPEQ----SLLPLKPRDLQIARSLM------SSEILQENYKEEL-SLMVHNGQRAEVEAL 333
SL+P+ RD + A +++ + + + +++EL SL+V N +AE+E L
Sbjct: 310 ATNHTDMSSLVPMSQRDRKKAEAILKRNPSFAEDGPEPTWRKELQSLLVMN-LKAELEIL 368
Query: 334 Y 334
Y
Sbjct: 369 Y 369
>gi|406605807|emb|CCH42798.1| Type II DNA topoisomerase VI subunit A [Wickerhamomyces ciferrii]
Length = 389
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 31/288 (10%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N ++ F K++ + L +K T+R+L+Y+ F +Q V++ I + L
Sbjct: 84 NESRQFAMCLKLISMLIENLKNKKITTKRDLYYQ----DVSLFENQSNVDKLINSICKSL 139
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD------ 177
+ +G VA+ +GL G + ++ID S ++I L+ +++
Sbjct: 140 GFNNLEIGAVAAQKGLCFGNI-------DIIDISNNDMKSFNIKDGCFLIPRINSNFKII 192
Query: 178 LKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+K YI++VEK +IFQ + + + +++IT KG+PD T+ L+ L++ +P +PI
Sbjct: 193 IKHPIDYILIVEKDSIFQLICDPLKMSN--NLIITGKGFPDNNTKMFLNLLSKQYPQIPI 250
Query: 238 LALVDWNPAGLAILCTFKFG----SIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPL 293
D +P GL I+ +K G + M E ++ C L ++ + L
Sbjct: 251 YGFADIDPHGLNIMKQYKDGGDLNNCFMVHEMDQFHCQNLKLLDLLSNLHFLKTFDCLDF 310
Query: 294 KPRDLQIARSLMSSE--------ILQENYKEELSLMVHNGQRAEVEAL 333
D QI+ L+ SE I E ++ +L + G++AE++ +
Sbjct: 311 SLIDYQISFKLIESEFDDNDNNSIENEKFRNQLQRTMFFGKKAEIDLI 358
>gi|156062826|ref|XP_001597335.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980]
gi|154696865|gb|EDN96603.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 300
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 136/279 (48%), Gaps = 54/279 (19%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
+T+R+++Y+ PE FT Q V+R + D+ ++LG+ + + ++E
Sbjct: 33 ITKRDMYYR----DPELFTKQAIVDRFVDDIA-------YTLGLKRDAMNVSQLVPWVRE 81
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQ--I 206
+E++DL + ++I+V+EK + L Q +
Sbjct: 82 ------------------------IEEIDL-SQVKWILVIEKEVVHFNLQVATSLTQYRL 116
Query: 207 PSILI----TAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG 262
P TAKGYPDI +R LH L P +PI ALVD++P G+ I+ T+K+GS+ +
Sbjct: 117 PFAHWKKSDTAKGYPDIQSRQFLHYLAENHPLIPIYALVDFDPDGIGIMSTYKYGSVALA 176
Query: 263 MEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQEN-----Y 314
E + +++WLGL+ D+ + ++ LL L RD +IA ++ ++ Q+ +
Sbjct: 177 HENEDLSVPSIRWLGLKSTDMMHGVKEDEGLLKLTKRDRRIAVGMLQRDVCQDGGVEKEW 236
Query: 315 KEELSLMVHNGQRAEVEAL----YFHGYDYLGKYIAKKI 349
+ +L +M+ +AE++ + G + KYI +K+
Sbjct: 237 RRQLQIMLMLNTKAEIQVIGNGDLNTGNMSINKYIKEKM 275
>gi|304315143|ref|YP_003850290.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
gi|302588602|gb|ADL58977.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
Length = 353
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 142/296 (47%), Gaps = 11/296 (3%)
Query: 50 FLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY-FTS 108
L + TRS+ K ++ C ++++EK T REL+Y + + E F
Sbjct: 50 ILGDRYGTRSMGNVKQIKKIGQMLYTANFCKDLVAREKTATLRELYY--ISEGWEVDFAD 107
Query: 109 QLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSSGYSIS 167
Q + N +D+ L +R LG++ G V G L ++E + E I+ G SGY+IS
Sbjct: 108 QQESNIVGEDLEVTLGMTREELGLMPEEDGASVYGALTVREGDIE-INALRSGKSGYNIS 166
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
+ +E +D D +I VE +F RL ++ + + ++++ KG ATR + R
Sbjct: 167 PTIDEVEFVD--HDVERVIAVETMGMFHRLVQEKAYKKFDALIVGLKGQAARATRRFIKR 224
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIP 286
+N DLP+ D +P G I GS + ++ A + K+LG+ D+ +
Sbjct: 225 VNEEL-DLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDI-INY 282
Query: 287 EQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
+ PLK D+ + L++ ++ + K E+ M+ G++AE ++ +G +Y+
Sbjct: 283 DLPTDPLKDIDVVRLKELLNDPRYRDEFWKTEIKKMLKIGKKAEQQSFSKYGLEYV 338
>gi|452823788|gb|EME30795.1| DNA topoisomerase VI subunit A isoform 2 [Galdieria sulphuraria]
Length = 298
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 23/254 (9%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELF--YKLLCDSPEYFT----------SQLQVN 113
++ V W+V + L +K +++R+ K L S E FT SQ + +
Sbjct: 43 SRRLVIFWRVADIIQTSLCDKKAISKRDSMKILKSLNKSIEPFTVYYSEHKVARSQKETD 102
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I+ + +L R L +VA RGL+AG L + N ID SSG SI +
Sbjct: 103 RAIKRLCFILSIPRHYLMVVAGPRGLLAGGLRIVFQNGTEIDIGKT-SSGVSIPEAPYEI 161
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAF 232
E +++TDA++I++VEK+++F LT+ F++ P IL+++ GYP A L L
Sbjct: 162 E--NIQTDAQFIMIVEKNSVFHHLTQHQFFDRFPKGILLSSSGYPSQAFSDFLVLLRVNC 219
Query: 233 PDLPILALVDWNPAGLAI-LCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLL 291
P+ PIL LVD +P G+ I LC + ++ + W+G+ +DV+ + + L
Sbjct: 220 PEAPILFLVDADPYGVHIALCHLQ------SLQKEALSSLAFWIGISVEDVERVKYDATL 273
Query: 292 PLKPRDLQIARSLM 305
+ RD A+ L+
Sbjct: 274 SITARDRAKAQKLL 287
>gi|255514007|gb|EET90271.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 370
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 151/322 (46%), Gaps = 24/322 (7%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE-----Y 105
L +S S AK F++ + C + Q T R LFY+L E
Sbjct: 55 LGNSKEEHSFINVAQAKRFMQTVAIAAKCHDFVKQNLHTTIRGLFYQLKYSLGEDIDENI 114
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE---PNQEVIDCSACGSS 162
F Q + N I+D+ L R + + A+ +G++AG + + + ++ ID G S
Sbjct: 115 FNEQSESNPLIEDLEVALGIKREYMHLNANRKGVLAGNMKVIDRFGDDRIEIDTGKTGRS 174
Query: 163 GYSISGDL-SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIAT 221
G++I D+ + +E +D+K A+Y+IVVEK A++QRL ED + + +ILI+ +G T
Sbjct: 175 GWAIPSDVDNDIEFVDVK--AKYVIVVEKDALWQRLNEDGFWKKENAILISPQGQAARGT 232
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGD 280
R L+ +L A LP+ D + G I T K GS+ + A +++G+
Sbjct: 233 RRLIRKL--ADQGLPVYVFNDGDAWGWYIYWTIKTGSMNLAYIGRDIATPEARFIGVTMA 290
Query: 281 DVQLIPEQSLLPLKPRDLQIARSLMSSEILQ----ENYKE---ELSLMVHNGQRAEVEAL 333
D++ L ++ ++ I R + E+L +KE EL ++ ++ E + L
Sbjct: 291 DIEHYDFLKNLTMRATEVDIKR---AQEMLNYPWINRHKEWVAELKKVLETKKKLEQDTL 347
Query: 334 YFHGYDYLGKYIAKKIVQADYI 355
++ YI +KI D++
Sbjct: 348 QGPRLTFVDDYIREKIKNRDFL 369
>gi|148508003|gb|ABQ75802.1| DNA topoisomerase VI subunit A [uncultured haloarchaeon]
Length = 366
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 159/346 (45%), Gaps = 23/346 (6%)
Query: 24 SDLPLINRKS-SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQI 82
+ +P I R + + S + T+V W++ + T S + AK ++ V+E
Sbjct: 30 TQIPEIERPTRTKSNIEYDEDTEV-WVYGDRT-STTSGKSVDGAKKLFKLAYVVEFLTDQ 87
Query: 83 LSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-L 139
L Q+K T REL+Y + + F Q + N I+++ + R + G
Sbjct: 88 LEQDKSSTLRELYYLSESWNEDHAQFADQSESNSLIEELEIVSDARREEFHMRPEESGAT 147
Query: 140 VAGRLMLQEPNQE---VIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
+ G L ++E + +I C A G GY I + +E L+ TDA++++ VE +
Sbjct: 148 LIGPLKIKEQTRRGDRLIHCQADVGEGGYQIPNNPDTIEFLE--TDAQFVLAVETGGMRD 205
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
RL E+ + +I++ KG P ATR ++ R N DLP+ D +P I +
Sbjct: 206 RLVENGFDEEYNAIIVHLKGQPARATRRIIKRFNTEL-DLPVAVFTDGDPWSYRIYASVS 264
Query: 256 FGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLP---LKPRDLQIARS-LMSSEIL 310
+GSI + Y + +++G+ +D+ + LP L D+ S L
Sbjct: 265 YGSIKSAHLSEYLATPDAQYVGITPEDIT----KYNLPSDILSDSDINALESELEDPRFS 320
Query: 311 QENYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQADYI 355
E +++++ L + GQ+AE +AL G DY+ Y+ +K+ Q ++
Sbjct: 321 TEYWEKQIKLQLKIGQKAEQQALASRGLDYVTDSYLPEKLAQHGFL 366
>gi|212535386|ref|XP_002147849.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
gi|210070248|gb|EEA24338.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
Length = 397
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 143/305 (46%), Gaps = 46/305 (15%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F + +V+ + + +T+R ++Y D+P F +Q VN + D+ +
Sbjct: 84 AWKFTCILRVLSLIIEAVQDNLLITKRSIYY----DNPGLFGTQAVVNAIVDDIAYTIGV 139
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
R +L + + RGL G + ++ + ++D +A ++ L + +D+ ++ +++
Sbjct: 140 DRTALHVASVGRGLAVGAVRIKTKSDTILDMTAED----ALIPRLKDIGSIDI-SEVKWV 194
Query: 186 IVVEKHAIFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLH---------------R 227
VVEK AIF+RL + + + ILIT KGYPDI TR +H
Sbjct: 195 CVVEKEAIFRRLVHNRYHLESTAGKGILITGKGYPDICTREFVHLISDISCKRDSSSLQN 254
Query: 228 LNRAFPDLP--ILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQL 284
L+ P P ALVD + G+AI+ T+K+GS+ A A ++WLG R DV +
Sbjct: 255 LHIVQPPTPPRFFALVDGDCDGMAIMSTYKYGSMAHAHASASLNAPKLQWLGTRLIDV-I 313
Query: 285 IPEQSL---------LPLKPRDLQIARS-LMSSEILQEN-----YKEELSLMVHNGQRAE 329
+ L + L RD++ RS L+ + + ++ ++ EL M+ + E
Sbjct: 314 VKHNGLEVEDEDWVMISLSYRDVKKIRSMLLKNPVFAQDGPEIEWRAELQTMMMLNTKIE 373
Query: 330 VEALY 334
E LY
Sbjct: 374 TEVLY 378
>gi|7635881|emb|CAB88597.1| related to MEIOTIC RECOMBINATION PROTEIN REC12 [Neurospora crassa]
Length = 474
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
+ F +++++E + L VT+R ++Y+ + E F SQ V+ + ++ L
Sbjct: 122 RRFEALFRIIEISHEALLSGTLVTKRNIYYQNM----ELFRSQSVVDDMVDNLAFTLGVG 177
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R L IVA+++GLVAG++ L IDC+ S D + L + +RY
Sbjct: 178 RNDLNIVATAKGLVAGQVELIMRGGSKIDCAE--------SSDSATFRTL---SASRYYT 226
Query: 187 VVEKHA---IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
V + + RL + F N + KGYPD+ATR L ++ P L + ALVD+
Sbjct: 227 VSRAGSGILVTVRLCDLFCSNNADN-YTQGKGYPDLATRKFLAAIHSVRPRLLMFALVDF 285
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL 284
+P G+++L T+++GS + E ++WLG+R DV L
Sbjct: 286 DPHGISVLRTYQYGSQRLDHEERTKVFGLRWLGIRSSDVLL 326
>gi|15679026|ref|NP_276143.1| DNA topoisomerase VI subunit A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122955|sp|O27089.1|TOP6A_METTH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2622109|gb|AAB85504.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 353
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 23/301 (7%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY-FTSQ 109
L + TRS+ K ++ C ++++EK T REL+Y + + E F Q
Sbjct: 51 LGDRYGTRSMGNVKQIKKIGQMLYTANFCKDLVAREKTATLRELYY--ISEGWEVDFADQ 108
Query: 110 LQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSSGYSISG 168
+ N +D+ L +R LG++ G V G L ++E + E ID G SGY+IS
Sbjct: 109 QESNIVGEDLEVTLGMTREELGLMPEEDGASVYGALTVREGDIE-IDALRSGKSGYNISP 167
Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
+ +E +D D +I VE +F RL ++ + + ++++ KG ATR + R+
Sbjct: 168 TIDEVEFVD--HDVERVIAVETMGMFHRLVQEKAYKKFDALIVGLKGQAARATRRFIKRV 225
Query: 229 NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPE 287
N +LP+ D +P G I GS + ++ A + K+LG+ D+
Sbjct: 226 NEEL-NLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDII---- 280
Query: 288 QSLLPLKP-RDLQIARSLMSSEILQEN------YKEELSLMVHNGQRAEVEALYFHGYDY 340
LP P +D+ + R E+LQ+ +K E+ M+ G++AE ++ +G +Y
Sbjct: 281 NYDLPTDPLKDVDVVR---LKELLQDPRYRGDFWKTEIKKMLTIGKKAEQQSFSKYGLEY 337
Query: 341 L 341
+
Sbjct: 338 V 338
>gi|448727753|ref|ZP_21710102.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
gi|445789739|gb|EMA40418.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
Length = 366
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 18/339 (5%)
Query: 23 ISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQI 82
I ++ L R SN + +DV W++ + TRS A+ ++ ++
Sbjct: 32 IPEMELPTRTKSNIEYDEN--SDV-WVYGDRT-STRSANSVRGARKLLKAIYTIDFLADQ 87
Query: 83 LSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-L 139
L +++ T REL+Y + + F+ Q + N+ ++D+ + +R + G
Sbjct: 88 LGEDRSSTLRELYYLSESWDNEEAQFSDQDESNQLVEDLEIVSEVTREDFHMRPEESGAT 147
Query: 140 VAGRLMLQEP---NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
+ G L L+E + I C G GY I + +E LD DA +I+ VE +
Sbjct: 148 LMGPLYLREQTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLD--HDAEFILCVETGGMRD 205
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
RL E+ + +I++ KG P ATR + RL+ DLP++ D +P I +
Sbjct: 206 RLVENGFDDDYGTIVVHLKGQPARATRRITKRLHNEL-DLPVVVFTDGDPWSYRIYGSVA 264
Query: 256 FGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY 314
+GSI + Y K++G++ D+ + + PL D+ S +S Q +Y
Sbjct: 265 YGSIKSAHLSDYLATPEAKFVGIQPTDI-VEYDLPTDPLADSDINALESELSDPRFQTDY 323
Query: 315 -KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQ 351
+E++ L + G++AE +AL G D++ Y+ +++ +
Sbjct: 324 WREQIELQLDIGKKAEQQALASRGLDFVTDTYLPERLTE 362
>gi|242792903|ref|XP_002482051.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718639|gb|EED18059.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
Length = 409
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 52/311 (16%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F + +V+ + + +T+R ++Y D+P F +Q VN + D+ +
Sbjct: 88 AWKFTCILRVLSLITEAVQDNLLITKRSIYY----DNPGLFGTQAVVNTIVDDIAYTIGV 143
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
R L I++ +GL G + ++ + ++D +A ++ L + +D+ ++ +++
Sbjct: 144 DRAVLHIISVGKGLAVGAVRIRTKSDSMLDLTAED----ALIPRLIDVSSVDI-SEVKWV 198
Query: 186 IVVEK------HAIFQRLTEDFVFNQIPS---ILITAKGYPDIATRFLLH--------RL 228
VVEK A+F+RL + + + ILIT KGYPDI TR +H R
Sbjct: 199 CVVEKEAADKRQAVFRRLVHNRYHLESAAGKGILITGKGYPDICTREFVHLISDITFRRH 258
Query: 229 NRAFPDLPIL---------ALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLR 278
N ++ I+ ALVD + G+AI+ T+K+GS+ A A ++WLG R
Sbjct: 259 NATLQNIDIVPSPTPLRFFALVDGDCDGIAIMSTYKYGSMAHAHASAMLNAPKLQWLGTR 318
Query: 279 GDDVQLIPEQS---------LLPLKPRDLQIARS-LMSSEILQEN-----YKEELSLMVH 323
+DV +I + ++ L RD++ RS LM + + EN ++ EL +M+
Sbjct: 319 IEDV-IIKQNGAEVEDEDWVMISLSNRDVKKIRSMLMKNPVFGENGPQLDWRVELQIMMM 377
Query: 324 NGQRAEVEALY 334
+ E E LY
Sbjct: 378 LNTKVETEVLY 388
>gi|336269691|ref|XP_003349606.1| SPO11 protein [Sordaria macrospora k-hell]
gi|380093319|emb|CCC08977.1| putative SPO11 protein [Sordaria macrospora k-hell]
Length = 384
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 23/175 (13%)
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSIS 167
SQ V+ + ++ L R L IVA+++GL+AG++ L I+C+ SG +
Sbjct: 106 SQSMVDEMVDNLAFTLGVGRGDLNIVATAKGLIAGQVQLMMRGGTSINCAESSDSGVLLP 165
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
+S +EK+D ++ ++++V+EK KGYPD+ATR L
Sbjct: 166 S-ISAVEKIDFQS-VKWLLVIEKEG---------------------KGYPDLATRKFLAT 202
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
L+ P LP+ ALVD++ G++IL T+++GS + E ++WLG+R DV
Sbjct: 203 LHFVQPRLPMFALVDFDTHGISILRTYQYGSQRLDHEERTKVPRLRWLGIRSSDV 257
>gi|350293955|gb|EGZ75040.1| DNA topoisomerase IV, alpha subunit [Neurospora tetrasperma FGSC
2509]
Length = 439
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
+ F +++++E + L VT+R ++Y+ + E F SQ V+ + ++ L
Sbjct: 122 RRFEALFRIIEISHEALLSGTLVTKRNIYYQNM----ELFRSQSVVDEMVDNLAFTLGVG 177
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R L IVA+++GLVAG++ L I+C+ S D + L + +RY
Sbjct: 178 RNDLNIVATAKGLVAGQVELIMRGGSKINCAE--------SSDSATFRTL---SASRYYT 226
Query: 187 VVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
V + IL+T KGYPD+ATR L ++ P L + ALVD++P
Sbjct: 227 VSRAGS---------------GILVTGKGYPDLATRKFLATIHSVRPRLLMFALVDFDPH 271
Query: 247 GLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
G+++L T+++ S + E ++WLG+R DV
Sbjct: 272 GISVLRTYQYSSQRLDHEERTKVFGLRWLGIRSSDV 307
>gi|157867175|ref|XP_001682142.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125594|emb|CAJ03588.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 651
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 74/284 (26%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
++ F+ + + TQR+++Y L+ + +Q VNRT+Q + +L R +G+VA
Sbjct: 139 ILTELFRNVGRGDVATQRDVYYHLV----RHIQTQEVVNRTVQQLSRVLRLPRQLMGVVA 194
Query: 135 SSRGLVAGRLMLQEPNQE---------------------------------VIDCSACGS 161
RG +AG L + N + V D
Sbjct: 195 GGRGYIAGWLSYRGRNLQGGGTGLAAEEGMPLPLLSADLVVSVLGVVERAAVEDDDGRSV 254
Query: 162 SGYSISGDLSLLEKLDLKTDARY-----------------------------IIVVEKHA 192
SG + S +L+ L +R+ I+VVEKHA
Sbjct: 255 SGLASSSNLTHSRSLQQSASSRWTTTEHRDVTSRSANSAAVAGFQVPPNVCAILVVEKHA 314
Query: 193 IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+F +L + + +P +L+TA+GYP A R LL L+ A P ++ LVD+NP GLAIL
Sbjct: 315 VFAQLLREGLPRLLPCVLLTAQGYPTHAARRLLAHLHAALPRAAVVGLVDYNPHGLAILA 374
Query: 253 TFKFGSI-------GMGMEAYRYAC-NVKWLGLRGDDVQLIPEQ 288
+++ + ME+ Y ++WLG+R V + E+
Sbjct: 375 AYRWAATSDVLPAGSASMESRYYPVPTLRWLGVRTAHVVRVMEK 418
>gi|288930742|ref|YP_003434802.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
gi|288892990|gb|ADC64527.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
Length = 360
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 18/304 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W++ + TRS A +R+ V+ + L K T REL+Y F
Sbjct: 49 WVYGDRT-STRSAKTVRGAYMLLRMAYVIGFLKEQLKANKSSTLRELYYISENWGLAKFD 107
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSAC----GSS 162
Q + +R I+D+ L R I G V G L ++E + + C G
Sbjct: 108 EQAESDRLIEDLEILTSFQREHFRIRPEEDGATVIGPLRIRENTRRGVREIHCQEDVGEG 167
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
GY I ++ +E +D DA ++I VE + RL E+ + +I++ KG P +TR
Sbjct: 168 GYQIPVNVDNIEFVD--HDADFVIAVETGGMRDRLVENGFDEKFRAIIVHLKGQPARSTR 225
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDD 281
LL RLN A +LP++ D +P I + +GSI + Y + K++G+R D
Sbjct: 226 RLLKRLN-AELNLPVVVFTDGDPWSYRIYASVAYGSIKAAHLSEYLATPSAKFVGIRPSD 284
Query: 282 VQLIPEQSLLP---LKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHG 337
+ + LP L +D+Q +++++ E +K E++L + G+++E +AL +G
Sbjct: 285 IV----KYDLPSDKLTDKDIQALKAILTDPRFDTEFWKNEINLQLELGKKSEQQALAKYG 340
Query: 338 YDYL 341
DY+
Sbjct: 341 LDYV 344
>gi|268536302|ref|XP_002633286.1| C. briggsae CBR-SPO-11 protein [Caenorhabditis briggsae]
Length = 381
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 13/178 (7%)
Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDL 235
D+ ++A +++VVEK IFQ+L ++ P IL+T+KGYPDIATR +L +
Sbjct: 145 DIVSEAEFVLVVEKDTIFQKLKDEDFQKMFPRGILVTSKGYPDIATRNVLKMFGER-KNF 203
Query: 236 PILALVDWNPAGLAILCTFKFGSIGMGMEAY-RYACNVKWLGLRGDDVQ--LIPEQSLLP 292
PI L D +P G+ I T+K+G+ E + +++W+GL D + I + LP
Sbjct: 204 PIYGLFDADPHGIEIYLTYKYGATKETAEGRGAFVPSIQWIGLFPTDFKNFFIDKSQQLP 263
Query: 293 LKPRDLQ-----IARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYI 345
L D I RS+ EI + EL M+ N + E+E++ G +Y+G+Y+
Sbjct: 264 LIRSDYVKIENLIPRSIQLGEI---SVTRELDYMIQNPLKFELESINMCGPEYMGRYL 318
>gi|257388767|ref|YP_003178540.1| DNA topoisomerase [Halomicrobium mukohataei DSM 12286]
gi|257171074|gb|ACV48833.1| DNA topoisomerase (ATP-hydrolyzing) [Halomicrobium mukohataei DSM
12286]
Length = 366
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 19/316 (6%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ S TRS + A+ ++ ++ Q L +++ T REL+Y L +S +
Sbjct: 54 WVYGDRS-STRSAKTVSGAQKLLKATYTIDFLAQQLEEDRSSTLRELYY--LSESWDLDE 110
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 111 AQFNTQDESNNLIEDLEIVSEVKREDFHMRPEESGAKVMGPLLLREQTRRGDREIHCQDD 170
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA +++ VE + RL E+ ++ SI++ G P
Sbjct: 171 VGQGGYQIPNNPDTIEFLD--NDADFVLCVETGGMRDRLVENGFDDEYDSIVVHLGGQPA 228
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L RL+ DLP++ D +P I + +GSI + Y +++G+
Sbjct: 229 RATRRLTKRLHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGI 287
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFH 336
R +D+ + + PL D+ S + Q E ++E++ L + G+++E +AL
Sbjct: 288 RPEDI-VEYDLPTDPLSDSDINALESELEDPRFQTEFWEEQIELQLDIGKKSEQQALASR 346
Query: 337 GYDYL-GKYIAKKIVQ 351
G D++ Y+ +++ +
Sbjct: 347 GLDFVTDTYLPERLTE 362
>gi|226529322|ref|NP_001145818.1| uncharacterized protein LOC100279325 [Zea mays]
gi|219884541|gb|ACL52645.1| unknown [Zea mays]
Length = 270
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
+V+ Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V
Sbjct: 103 RVLFVVQQLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
+GLV G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETV 215
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATR--------FLLH 226
FQRL D + I+IT +GYPDI TR FLLH
Sbjct: 216 FQRLANDKFCERNRCIVITGRGYPDIPTRRHVLLFIKFLLH 256
>gi|170586006|ref|XP_001897772.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
gi|158594796|gb|EDP33375.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
Length = 349
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 24/278 (8%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S ++ ++ + + Q+ + T+R+LFY + F Q ++ I +
Sbjct: 63 SKNSRLIAQMLRTISMIHQLRILKTHKTKRDLFY----EQKNLFGEQRNLDSCINQICCW 118
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
L S +++S GLV G+L + ++DCS ++ D S +L T +
Sbjct: 119 LGMDPTSGYLLSSGHGLVIGQLKIYRSTG-MVDCSL----KAALIDDFS---DANLFTTS 170
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPS-ILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
+ I+VVEK A FQ+L + PS +L+T +GYPDIATR LL++L+ +L + L+
Sbjct: 171 QCILVVEKDATFQKLIGEGFLKLFPSTLLVTGRGYPDIATRILLNKLS----NLQLFGLL 226
Query: 242 DWNPAGLAILCTFKFG--SIGMGMEAYRYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRD 297
D +P G+ I T+K+G S G+E + + +W+GL ++ +I LPL+ +
Sbjct: 227 DCDPHGIEIAMTYKYGNCSKTFGVENQTLS-HFEWIGLSRCELPKFVISAVQFLPLQKSE 285
Query: 298 LQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEAL 333
L L + N EEL M G + E+EA+
Sbjct: 286 LAKVEKLCQRTAILGNTALLEELIRMRQCGNKLELEAV 323
>gi|408397704|gb|EKJ76844.1| hypothetical protein FPSE_03030 [Fusarium pseudograminearum CS3096]
Length = 387
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 31/213 (14%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F R+ +++ L +T+R +FY+ + F Q +V+ + D+ L
Sbjct: 99 ATKFARILLILQLSHDALVSGTVLTKRHIFYQ----HQDLFEKQREVDDLVDDIAFTLGI 154
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
SR +L IVA+S+G++AG L + + GS+ GDL++ L
Sbjct: 155 SRGNLNIVAASKGVLAGPLTIGLYD---------GSTLNPCLGDLAVFRSL--------- 196
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
+ F R++ P +L+TAKGYPD+ TR L+ ++ +P LPIL L D++P
Sbjct: 197 ----CSSQFWRVSLSG-----PGVLVTAKGYPDLTTRSFLNLVSTRYPQLPILGLFDFDP 247
Query: 246 AGLAILCTFKFGSIGMGMEAYRYACNVKWLGLR 278
G+ I+ +++GS + EA ++WLG++
Sbjct: 248 DGVKIMRCYRYGSDRLSHEADLGTETLQWLGIK 280
>gi|357493057|ref|XP_003616817.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
gi|355518152|gb|AES99775.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
Length = 275
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 9/250 (3%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K F + + +L T+RE +Y D + Q + ++ + LL+C
Sbjct: 30 KIFDHILNHLTLIIYLLKDNSYSTKREFYYS---DKELFEYKQENSDEALEHIALLLYCC 86
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
+ L + A +RG V G L + E IDC G+ I + + K+ K +A +I+
Sbjct: 87 KDCLPVYADNRGKVVGELQFEYGGLE-IDCRKTDLLGHPIPLRVDCMTKM-TKREALFIL 144
Query: 187 VVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
+VE A L + P I++ G PD+ +R L+ +L+ LP+LALVD +
Sbjct: 145 LVESVATLVSLHSAGFEQRFPCIIVAGSGVPDVCSRKLVRKLSLDL-KLPVLALVDGDLY 203
Query: 247 GLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARS 303
G IL + GS M ++ N+ WLG+R D IP + L P +L+ +S
Sbjct: 204 GFRILTIYNKGSQKMAYDSENLTTPNIYWLGVRPCDADHYDIPSGCIKQLSPTELKSVKS 263
Query: 304 LMSSEILQEN 313
LM+ ++ +
Sbjct: 264 LMAKPFMKNH 273
>gi|345560247|gb|EGX43372.1| hypothetical protein AOL_s00215g108 [Arthrobotrys oligospora ATCC
24927]
Length = 610
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 84/352 (23%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
AFVRV +++ ++ +K T+R+++YK + F SQ V++ + D+ + L R
Sbjct: 264 AFVRVLELVREAIKL---DKIYTKRDIYYKDVA----LFGSQQTVDKLVDDIASALGVPR 316
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIV 187
SL I A+++GLV G L + + + +I+C+ G G I +EK++++ D+ +++
Sbjct: 317 RSLHITAAAKGLVCGDLSIFKTDGSIINCNIEG-EGVLIPSSTD-IEKVEIR-DSDTVLI 373
Query: 188 VEKH----------------------AIFQRLTEDFVFNQIPS--ILITAKGYPDIATRF 223
+EK AIF+ L E + ++P ILI KGYPDIATR
Sbjct: 374 IEKEVVANRNQDFVSLFLLTTPTKNKAIFRTLAESGDWKRLPGRPILICGKGYPDIATRE 433
Query: 224 LLHRL----NRAFPDLPILALVDWNPAGLAILCTFKFGSIG----------MGMEAYRYA 269
L H L + A L LVD++P GL I +K GS+ M + A R+
Sbjct: 434 LAHYLYLTKSLAGQYLDFYCLVDYDPHGLDIYTMYKNGSLSSRATGMFYEQMAVPALRHL 493
Query: 270 ----CNV-KWLGLRGDDV-QLI------------------------PEQSLLPLKPRDLQ 299
C++ ++ + G + Q I P Q LLP+ D
Sbjct: 494 GVKFCDILEYCSVEGSSMSQTIEESGIISTDNGEEPRSKRLRYTSSPPQGLLPMTAHDRA 553
Query: 300 IARSLMSSE--ILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKI 349
A S++ + + + ++L ++ G +AE++ L D L +Y+ +K+
Sbjct: 554 KAVSMLQRDHNTVAAEHTDDLRKLLFVGYKAEIQVL----GDQLVRYLDEKL 601
>gi|413933055|gb|AFW67606.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 365
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V +GLV
Sbjct: 94 QLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLV 149
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D
Sbjct: 150 MGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLAND 206
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLN 229
+ I+IT +GYPDI TR H +
Sbjct: 207 KFCERNRCIVITGRGYPDIPTRSNWHMMQ 235
>gi|413933053|gb|AFW67604.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 251
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V +GLV
Sbjct: 110 QLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLV 165
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D
Sbjct: 166 MGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLAND 222
Query: 201 FVFNQIPSILITAKGYPDIATR 222
+ I+IT +GYPDI TR
Sbjct: 223 KFCERNRCIVITGRGYPDIPTR 244
>gi|169624501|ref|XP_001805656.1| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
gi|160705184|gb|EAT77175.2| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
Length = 319
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 51/254 (20%)
Query: 107 TSQLQ--VNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
T+Q Q V+R + D+ SR L + A+++GLVAGR + N ID G
Sbjct: 53 TAQEQSVVDRYVDDIACTFGISRSQLNVTAAAKGLVAGRFGIIRENGHRID-GMKDREGI 111
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
+ + + +DL + +++V+EK A KGYPD+A+R
Sbjct: 112 LVP-KIGENDTMDLAS-IHWVLVIEKEA---------------------KGYPDVASRLF 148
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA-------CNVKWLGL 277
L R+ P +P+ ALVD +P G+AI+ T+K+GS + E +++W+G+
Sbjct: 149 LRRVADQAPKIPMFALVDLDPDGMAIMSTYKYGSYRLAHEDTTRKETSGLSLPSIQWIGV 208
Query: 278 R------------GDDVQLIPE-QSLLPLKPRDLQIARSLMSSEIL-----QENYKEELS 319
R G D ++PE Q L+ L RD A ++ ++ +E+++ EL
Sbjct: 209 RRHHICRTPVDEGGTDASVMPELQGLMKLTARDRTKAACMLEWDLCAEGGPEEDWRHELQ 268
Query: 320 LMVHNGQRAEVEAL 333
M+ +AE++ L
Sbjct: 269 AMLMLNTKAEMQIL 282
>gi|403168183|ref|XP_003327852.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167387|gb|EFP83433.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 454
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 57 TRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
TR+ + + + ++ +V+E + + +T+R++FY + F Q+ V+R +
Sbjct: 162 TRNRSSGSGIRELSQLLRVLELSHDAILGKMIMTKRDVFYNDV----NLFKKQVVVDRLV 217
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVI--DCSACGSSGYSISGDLSLLE 174
D+ A +R L AS +GL G L L VI D G ++ ++
Sbjct: 218 DDLAATFEITRGQLHFAASPKGLFQGDLEL------VIIGDTITSGHGPPALIPPEDTIK 271
Query: 175 KLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP- 233
+L + R+I++VEK I GYP ++TR L RL+
Sbjct: 272 ELKPGPNIRFILIVEKEGI---------------------GYPSLSTRQLASRLSEHQEV 310
Query: 234 ---DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL--IPEQ 288
+PIL LVD +P GL I +KFGS M A +W+G+ D I
Sbjct: 311 VKRRVPILILVDCDPHGLDIAKVYKFGSQSMSFHPGLRAKQAEWIGISSSDWNEFNIDCD 370
Query: 289 SLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
+ P+ D + A SL+ S++L E++K E+ M +++E++ L
Sbjct: 371 LICPMTLHDYKKADSLLMSDVLPESWKNEVRRMKETRKKSEIQIL 415
>gi|84999554|ref|XP_954498.1| hypothetical protein [Theileria annulata]
gi|65305496|emb|CAI73821.1| hypothetical protein, conserved [Theileria annulata]
Length = 340
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 42/275 (15%)
Query: 85 QEKRVTQRELFYKLLCDSPEYFTSQLQVNR---TIQD---VIALLHCSRF---SLGIVAS 135
Q + TQRELFY L + +Q ++N I D +H F + +V S
Sbjct: 49 QNRTCTQRELFYNL----GNFIKTQSEINNFGVNITDRGTTNVTIHNKNFINYDVYVVGS 104
Query: 136 SRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
GL+ L +E ID S + Y + ++LE LD + YI++VEK++IF
Sbjct: 105 IAGLIKFTLFDEE-----IDIS---NRPYGLCISSNMLE-LDSEVYGNYILIVEKYSIFV 155
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
+L ++ IP ++IT G+P TR L+++++ I L D++P G+ IL ++
Sbjct: 156 QLCSQRIWETIPLVMITGNGFPSNNTRLLVNKISDNSKS-EICYLGDYDPHGILILLSYI 214
Query: 256 FGSIGMGMEAY---------------RYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
+ S + Y R +WLG+R DDV ++LL L P +L +
Sbjct: 215 YSSKLVNEVNYCDSNTNQDHNINNPFRTVSRYRWLGIRSDDVLRYDVKNLLSLSPNELSV 274
Query: 301 ARSLMSSE--ILQENYKEELSLMVHNGQRAEVEAL 333
+ L S IL +EE+ +H ++ E+EA+
Sbjct: 275 LKRLRSDPRVILNTELREEVENNLH--KKVEIEAV 307
>gi|67902544|ref|XP_681528.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|40739807|gb|EAA58997.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|259481048|tpe|CBF74226.1| TPA: spo11 homologue spoA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 328
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 26/222 (11%)
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
+++GLVAG + EVID A S+ + + + LD+ +D ++I+++EK A+F
Sbjct: 92 TAKGLVAGYYRVTTVRDEVID--ARESTEDCLIPRVQDIADLDI-SDVKWILIIEKEAVF 148
Query: 195 QRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRL-NRAFPDL------PILALVDWN 244
+RL + N ILIT KGYPD+ATR + R+ FP P L D +
Sbjct: 149 RRLVRNNFHNHTIVGKGILITGKGYPDLATRSFVRRIFQSTFPRSTLTQAPPFYILADGD 208
Query: 245 PAGLAILCTFKFGSIGMGMEAYR--YACNVKWLGLRGDDV----QLIPEQSLLPLKPRD- 297
P G+AI+ T+K+GS+ E R C ++WLGLR ++ + +++L+ L RD
Sbjct: 209 PDGIAIMSTYKYGSMAHTRENERLNLPC-LQWLGLRISEIIGGLESDADETLMSLTRRDR 267
Query: 298 LQIARSLMSSEIL-----QENYKEELSLMVHNGQRAEVEALY 334
+I L S I + ++ EL M+ +AE+E LY
Sbjct: 268 RKIGTMLKRSPIWAVDGPEAEWRVELQRMLILNVKAEIEILY 309
>gi|336472796|gb|EGO60956.1| hypothetical protein NEUTE1DRAFT_98113 [Neurospora tetrasperma FGSC
2508]
Length = 454
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
+ F +++++E + L VT+R ++Y+ + E F SQ V+ + ++ L
Sbjct: 122 RRFEALFRIIEISHEALLSGTLVTKRNIYYQNM----ELFRSQSVVDEMVDNLAFTLGVG 177
Query: 127 RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYII 186
R L IVA+++GLVAG++ L I+C+ S D + L + +RY
Sbjct: 178 RNDLNIVATAKGLVAGQVELIMRGGSKINCAE--------SSDSATFRTL---SASRYYT 226
Query: 187 VVEKHA---IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW 243
V + + RL + F N + KGYPD+ATR L ++ P L + ALVD+
Sbjct: 227 VSRAGSGILVTVRLCDLFYSNNADN-YTQGKGYPDLATRKFLATIHSVRPRLLMFALVDF 285
Query: 244 NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
+P G+++L T+++ S + E ++WLG+R DV
Sbjct: 286 DPHGISVLRTYQYSSQRLDHEERTKVFGLRWLGIRSSDV 324
>gi|298675296|ref|YP_003727046.1| DNA topoisomerase [Methanohalobium evestigatum Z-7303]
gi|298288284|gb|ADI74250.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalobium evestigatum
Z-7303]
Length = 370
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 13/302 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQ-ILSQEKRVTQRELFYKLLCDSPEYF 106
W++ RS + A ++ K ++ L Q + T REL+Y F
Sbjct: 59 WVYGGRE-SERSAKTTKGAYQLLKTSKTIDFVMNNHLGQNRGSTLRELYYISENWGVAKF 117
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQE---VIDCSA-CGS 161
Q + ++ ++D+ + + R + G + G L L+E + I C G
Sbjct: 118 REQPESDKLVEDLEIITNLQREYFHMRPEEDGATLFGPLKLREETKRGARTIHCQEDIGE 177
Query: 162 SGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIAT 221
SGY I ++ +E L+ DA +II +E ++ RL E+ + ++L+ KG P +T
Sbjct: 178 SGYQIPFNVENIEFLE--NDANFIIAIETGGMYARLIENGFDEKYNAVLVHLKGQPARST 235
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGD 280
R ++ R+N LP+L D +P I + +G+I + + N K+LGL+
Sbjct: 236 RRIIKRMNEEL-GLPVLVFTDGDPWSYRIYASIAYGAIKSAHLSEFMATPNAKFLGLQPT 294
Query: 281 DVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYD 339
D+ + E S L RD++ RS +S + +Y KE++ L + ++AE +A G D
Sbjct: 295 DI-VEYELSTDKLTERDVEALRSELSDPRFETDYWKEQIELQLDIKKKAEQQAFAGKGLD 353
Query: 340 YL 341
++
Sbjct: 354 FV 355
>gi|315048665|ref|XP_003173707.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
gi|311341674|gb|EFR00877.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
Length = 387
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 136/268 (50%), Gaps = 31/268 (11%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
++R++FY+ P YF SQ V+R I D+ L R +L + A+++G + G +
Sbjct: 110 SKRDIFYQ----DPVYFGSQTLVDRYIDDIAFTLDVDRAALHVAAAAKGAIGGNFSITMK 165
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
N+ I A I + ++ +D + +I+VVEK A+F RL N +
Sbjct: 166 NESSIQVGAFAEG--IIIPRIDEVDGID-TSGISWILVVEKEAVFHRLITSGYHNTSAAG 222
Query: 209 --ILITAKGYPDIATRFLLHRLNR---------AFPDLPILALVDWNPAGLAILCTFKFG 257
IL+T KGYPD+++R L L+ + P LPI LVD +P G+AI+ T+K+G
Sbjct: 223 NGILLTGKGYPDLSSREFLRLLSSQKGCNSKIVSNP-LPIFILVDRDPDGMAIMSTYKYG 281
Query: 258 SIG-MGMEAYRYACNVKWLGLRGDD----VQLIPEQSLLPLKPRDLQIARSLM------S 306
S+ + A +++W+GL+ + V SL+P+ RD + A +++ +
Sbjct: 282 SMAQLHRNANLNVPSIRWVGLQASEMISTVHPRNTPSLVPMSQRDRKKAEAMLKRNPSFA 341
Query: 307 SEILQENYKEELSLMVHNGQRAEVEALY 334
+ + +++EL M+ +AE+E LY
Sbjct: 342 EDGPEPTWRKELQSMLVMNVKAELEILY 369
>gi|409095996|ref|ZP_11216020.1| DNA topoisomerase VI subunit A [Thermococcus zilligii AN1]
Length = 385
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 24/324 (7%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I L R A+ F++ +M +++S++K + RE +Y P
Sbjct: 64 IKLGDKLSRRYFLNVAHARKFMQTLIIMAYVKRLVSEDKHASLREAYYANKHTIPGTHEN 123
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ + R + + A RG + G +++++ E + S GS G+
Sbjct: 124 TFEDQSESDPIIEDLERMFGVLREEMNLTADRRGYIYGDIVIRDGEDE-FNASKLGSGGW 182
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 183 AVPGTVEHIQFSEINVD--YALVVETAAMADRLIEEKYSKKENALIIATQGQASRGVRRL 240
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 241 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKLGSINLAYLSEKLATPEAKFVGMTMDDIK 299
Query: 284 -------------LIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEV 330
+ P + P +I + E ++ +L L + G R E
Sbjct: 300 RYGLENVTEKLKGIPPSKKGGPTGDYK-RIIEEMNYPWFQNEEWQRQLKLALDWGVRIEQ 358
Query: 331 EALYFHGYDYLGK-YIAKKIVQAD 353
+AL +++ K Y+ +KI D
Sbjct: 359 QALANKSLEFVAKEYLPEKINNGD 382
>gi|448688770|ref|ZP_21694507.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
gi|445778640|gb|EMA29582.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
Length = 368
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 19/314 (6%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ + TRS + A+ ++ ++ Q L +++ T REL+Y L +S +
Sbjct: 56 WVYGDRN-STRSAKTVSGAEKILKAVYTIDFLSQQLEEDRSSTLRELYY--LSESWDLDE 112
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 113 AQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 172
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA++++ VE + RL E+ ++ ++++ G P
Sbjct: 173 VGQGGYQIPNNPDTIEFLD--NDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPA 230
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 231 RATRRLIKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGI 289
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
R +D+ + E PL D+ S + Q ++ +E++ L + ++AE +AL
Sbjct: 290 RPEDI-VEYELPTDPLADSDVNALESELEDPRFQTDFWEEQIELQLDINKKAEQQALASR 348
Query: 337 GYDYLGK-YIAKKI 349
G D++ + Y+ +++
Sbjct: 349 GLDFVTETYLPERL 362
>gi|55377344|ref|YP_135194.1| DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC 43049]
gi|448640229|ref|ZP_21677283.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|448649278|ref|ZP_21679991.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
gi|68053279|sp|Q5V4R4.1|TOP6A_HALMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|55230069|gb|AAV45488.1| type II DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC
43049]
gi|445762019|gb|EMA13253.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|445773922|gb|EMA24951.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
Length = 368
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 19/314 (6%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ + TRS + A+ ++ ++ Q L +++ T REL+Y L +S +
Sbjct: 56 WVYGDRN-STRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTLRELYY--LSESWDLDE 112
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 113 AQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 172
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA++++ VE + RL E+ ++ ++++ G P
Sbjct: 173 VGQGGYQIPNNPDTIEFLD--NDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPA 230
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 231 RATRRLIKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGI 289
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
R +D+ + E PL D+ S + Q ++ +E++ L + ++AE +AL
Sbjct: 290 RPEDI-VEYELPTDPLSDSDVNALESELEDPRFQTDFWEEQIELQLDINKKAEQQALASR 348
Query: 337 GYDYLGK-YIAKKI 349
G D++ + Y+ +++
Sbjct: 349 GLDFVTETYLPERL 362
>gi|344211460|ref|YP_004795780.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|448667080|ref|ZP_21685681.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
gi|343782815|gb|AEM56792.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|445770602|gb|EMA21661.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
Length = 368
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 19/314 (6%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ + TRS + A+ ++ ++ Q L +++ T REL+Y L +S +
Sbjct: 56 WVYGDRN-STRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTLRELYY--LSESWDLDE 112
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 113 AQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 172
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA++++ VE + RL E+ ++ ++++ G P
Sbjct: 173 VGQGGYQIPNNPDTIEFLD--NDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPA 230
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 231 RATRRLIKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGI 289
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
R +D+ + E PL D+ S + Q ++ +E++ L + ++AE +AL
Sbjct: 290 RPEDI-VEYELPTDPLSDSDVNALESELEDPRFQTDFWEEQIELQLDINKKAEQQALASR 348
Query: 337 GYDYLGK-YIAKKI 349
G D++ + Y+ +++
Sbjct: 349 GLDFVTETYLPERL 362
>gi|297801432|ref|XP_002868600.1| hypothetical protein ARALYDRAFT_916070 [Arabidopsis lyrata subsp.
lyrata]
gi|297314436|gb|EFH44859.1| hypothetical protein ARALYDRAFT_916070 [Arabidopsis lyrata subsp.
lyrata]
Length = 78
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 49/54 (90%)
Query: 2 RARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSF 55
RARIEVSV+N L+ILNSPDPAISDL LINRK SNS ++QG+LTDVS+IFLS SF
Sbjct: 21 RARIEVSVLNLLRILNSPDPAISDLSLINRKRSNSCINQGILTDVSYIFLSTSF 74
>gi|448609019|ref|ZP_21660298.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
gi|445747396|gb|ELZ98852.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
Length = 366
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 17/328 (5%)
Query: 23 ISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQI 82
I ++ L R SN + ++V W++ + TRS A+ ++ +E +
Sbjct: 32 IPEMTLPTRTKSNIEYDED--SNV-WVYGDRT-STRSANSVRGARKLLKAAYTIEFLARQ 87
Query: 83 LSQEKRVTQRELFY-KLLCDSPE-YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-L 139
L +++ T REL+Y D+ E +FT Q + N+ I+D+ + +R + G
Sbjct: 88 LEEDRSSTLRELYYLSESWDAEEAHFTGQDESNQLIEDLEIVSEVTREDFHMRPEESGAT 147
Query: 140 VAGRLMLQEP---NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
+ G L L+E + I C G GY I + +E LD D +++ VE +
Sbjct: 148 LMGPLELREQTRRGERDIHCQMDVGEGGYQIPNNPDTIEFLDHDID--FVLCVETGGMRD 205
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
RL E+ ++ +++ KG P ATR + RL+ DLP++ D +P I +
Sbjct: 206 RLVENGFDDEYNVLVVHLKGQPARATRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVA 264
Query: 256 FGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQEN 313
+GSI + Y K++G++ D+ + + PL D+ +S L + +
Sbjct: 265 YGSIKSAHLSEYLATPEAKFVGIQPQDI-VDYDLPTDPLADSDINALQSELEDPRFMTDY 323
Query: 314 YKEELSLMVHNGQRAEVEALYFHGYDYL 341
+KE++ L + G++AE +AL G D++
Sbjct: 324 WKEQIELQLDIGKKAEQQALAARGLDFV 351
>gi|402587435|gb|EJW81370.1| type IIB DNA topoisomerase [Wuchereria bancrofti]
Length = 350
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S ++ ++ + + Q+ + R T+R+LFY + F Q ++ I +
Sbjct: 63 SKNSQLIAQMLRTISMIHQLRILKTRKTKRDLFY----EQKNLFGEQRNLDSCINRICCW 118
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL-SLLEKLDLKTD 181
L S +++S GLV G+L + C + G + S+ L +L T
Sbjct: 119 LGVDPTSGYLLSSGHGLVIGQLKI---------CRSTGITDCSLKATLIDDFSDANLFTT 169
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
A+ I+VVEK A FQ+L + P ++L+T +GYPDIATR LL++L+ +LP+ L
Sbjct: 170 AQCILVVEKDATFQKLIGEGFLKLFPNTLLVTGRGYPDIATRILLNKLS----NLPLFGL 225
Query: 241 VDWNPAGLAILCTFKFGSIG--MGMEAYRYACNVKWLGLRGDDVQ--LIPEQSLLPLKPR 296
+D +P G+ I T+K+G+ G++ + + +W+GL + +I LPL+
Sbjct: 226 LDCDPHGIEIAMTYKYGNCSKTFGVKNQTLS-HFEWIGLSRCKLPKFVISAVQFLPLQTS 284
Query: 297 DLQIARSLMSSEILQENYK--EELSLMVHNGQRAEVEAL 333
+L L + N +EL M + E+EA+
Sbjct: 285 ELVKVEKLCQRIAILGNTALLDELIRMRQCSNKLELEAV 323
>gi|448678347|ref|ZP_21689354.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
gi|445772334|gb|EMA23379.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
Length = 368
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 19/314 (6%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ + TRS + A+ ++ ++ Q L +++ T REL+Y L +S +
Sbjct: 56 WVYGDRN-STRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTLRELYY--LSESWDLDE 112
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 113 AQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 172
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA++++ VE + RL E+ ++ ++++ G P
Sbjct: 173 VGQGGYQIPNNPDTIEFLD--NDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPA 230
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 231 RATRRLIKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGI 289
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
R +D+ + E PL D+ S + Q ++ +E++ L + ++AE +AL
Sbjct: 290 RPEDI-VEYELPTDPLADSDVNALESELEDPRFQTDFWEEQIELQLDINKKAEQQALASR 348
Query: 337 GYDYLGK-YIAKKI 349
G D++ + Y+ +++
Sbjct: 349 GLDFVTETYLPERL 362
>gi|302909918|ref|XP_003050179.1| hypothetical protein NECHADRAFT_85034 [Nectria haematococca mpVI
77-13-4]
gi|256731116|gb|EEU44466.1| hypothetical protein NECHADRAFT_85034 [Nectria haematococca mpVI
77-13-4]
Length = 398
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 32/223 (14%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F R+ +++ L +T+R +FY+ + F Q QV+ + D+ L
Sbjct: 101 AVKFARILLILQLSHDALVSGTILTKRHIFYQ----HQDLFKRQAQVDELVDDIAFTLGI 156
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVID-CSACGSSGYSISGDLSLLEKLDLKTDARY 184
R L IVA+S+G++AG L + + +D CS G G +I + + + L ++
Sbjct: 157 GRADLNIVAASKGVLAGPLTIDLTDGTSLDPCS--GDLGVAIPA-IQSVSAVHLH-HVKW 212
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
+VVEK A KGYPD+ TR L+ ++ P L IL LVD++
Sbjct: 213 FLVVEKDA---------------------KGYPDLTTRAFLNYISTRHPQLSILGLVDYD 251
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
P G+ IL ++ GS + EA ++WLG++ D QLI E
Sbjct: 252 PDGVRILRCYRHGSDRLSHEADLDTQAIQWLGIKSD--QLIQE 292
>gi|221061353|ref|XP_002262246.1| type IIB DNA topoisomerase [Plasmodium knowlesi strain H]
gi|193811396|emb|CAQ42124.1| type IIB DNA topoisomerase, putative [Plasmodium knowlesi strain H]
Length = 333
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 44/292 (15%)
Query: 71 RVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSL 130
R++ ++E + L T R++FY +P F SQ N I + ++ R L
Sbjct: 42 RLFCIIEIVSKNLKTNTHSTLRQIFYT----NPHLFMSQNVSNVAIGKLTKIIKIPRELL 97
Query: 131 GIVASSRGLVAGRLMLQEPNQEV-IDCSACGSSGYSISGDLSL---LEKLDLKTDARYII 186
I S +G++ G + L+E +DC S + G L + + + D +Y++
Sbjct: 98 NIYNSPKGIIRGNIFLREKKSSPWVDCM----SIFETRGHLICPFGISDIKISPDVKYVL 153
Query: 187 VVEKHAIFQRLTE-DFVFNQIPSILITAKGYP----DIATRFLLHRLNRAFPDLPILALV 241
+VEK IF RL + DF+ N P ILITA+G+P I TR LL+ + R L + +
Sbjct: 154 IVEKETIFFRLLQSDFISNYGPCILITARGFPGWHSHINTRQLLYEIRRYNKGLKVFCIT 213
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYAC------NVKWLGL----RGDDVQLIPEQSLL 291
D++ GL+I T+ ME+ Y N+ WL L G ++ + +
Sbjct: 214 DYDAYGLSIAFTYT-----SKMESKVYYVEDVSIDNLFWLNLFSPEEGLQKHVLKDIDIS 268
Query: 292 PLKPRDLQI----------ARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
L RD+++ +R SSEI+ + E + M +G + EV+A+
Sbjct: 269 KLTLRDIRMLDNICETVKSSRKFCSSEIIA--WTEHANHMKTSGMKYEVDAI 318
>gi|408381803|ref|ZP_11179351.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
gi|407815734|gb|EKF86304.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
Length = 351
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 11/302 (3%)
Query: 44 TDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP 103
TD + L + RSL ++ V C ++ + K T RE++Y + +
Sbjct: 44 TDKRYYVLGDRYGKRSLGNVKQITKIAQMVYVANFCKDLVRRGKTATLREMYY--VSEGW 101
Query: 104 EY-FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGS 161
+ F Q + N +D+ L +R LG++ G V G + Q+ + E I+ G
Sbjct: 102 DVDFGDQQESNIVGEDLEVTLGMTREDLGLMPEEDGASVYGNITFQDDDVE-INALRAGK 160
Query: 162 SGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIAT 221
SGY+IS + ++ +D D R +I VE +F R+ ++ + + S+++ KG AT
Sbjct: 161 SGYTISPTIDEVDFVD--HDVRRVIAVETMGMFHRMVQENAYKKFDSLIVGLKGQAARAT 218
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGD 280
R L R+N +LP+ D +P G I GS + ++ A + K+LG+
Sbjct: 219 RRFLKRVNEEL-NLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTAS 277
Query: 281 DVQLIPEQSLLPLKPRD-LQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYD 339
D+ + + PLK D L++ E ++ E+ M+ G++AE ++ +G +
Sbjct: 278 DI-INYDLPTDPLKDIDVLRLKELSKDPRYKDEAWQMEIKKMLKIGKKAEQQSFSKYGLE 336
Query: 340 YL 341
Y+
Sbjct: 337 YV 338
>gi|374723606|gb|EHR75686.1| DNA topoisomerase VI subunit A [uncultured marine group II
euryarchaeote]
Length = 365
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 149/306 (48%), Gaps = 17/306 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R T +AK +R V+E ++L K T RE++Y F SQ + N +
Sbjct: 61 RDATSLGSAKQLLRALHVVEFIEEMLVAGKSSTLREMYYISEAWGLGKFGSQNESNNLAE 120
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQ--EVIDCSA---CGSSGYSISGDLS 171
D+ + C R + G + G L L+E N+ E + +A G SGY + ++
Sbjct: 121 DLEIVTKCLREDFKLRPEEDGARMIGNLTLRERNRRGEWMRINARDDVGDSGYGVPYNVE 180
Query: 172 LLEKLDL-KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
EK++L + D +I+ +E +F RL E+ L+ KG P +TR ++ R++
Sbjct: 181 A-EKIELLEHDIDFIMAIETGGMFDRLIENGFDEDYRCGLLHLKGQPARSTRRIMKRMSE 239
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQL--IPE 287
+ DLP++ +D +P I + +G+I + Y + +LG+ DD+ +P
Sbjct: 240 EW-DLPVVVFLDGDPWSFRIFASIAYGAIKTAHISEYLATPSATYLGITADDIVAYDLPN 298
Query: 288 QSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
L +D++ + ++ + + +E++++M+ G++AE ++L +G D++ + Y+
Sbjct: 299 DDL---SKKDIEALNAELTDPRFADGWWQEQINMMLELGKKAEQQSLAKYGLDFVTETYL 355
Query: 346 AKKIVQ 351
+K+ +
Sbjct: 356 PEKLAE 361
>gi|451854047|gb|EMD67340.1| hypothetical protein COCSADRAFT_136216 [Cochliobolus sativus
ND90Pr]
Length = 455
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 65/300 (21%)
Query: 63 SNAAKA--FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
+NA +A F + +++E L +T+R+++Y+ P+ F Q V+R + D+
Sbjct: 153 ANAQEAWKFTVLLRILELIHGSLLDNTVMTKRDIYYR----HPDLFVKQSVVDRYVDDLA 208
Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
+R L + GL+ V D + G T
Sbjct: 209 CTFDITRSQLNV-----GLLI---------PVVRDDDSWG------------------LT 236
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIP--SILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+ +++++EK A F+ L ++ + +++TAKGYPD+A+R L +L P +P+
Sbjct: 237 EIHWVLIIEKEATFRSLIGSAQWSTLGLHGVVVTAKGYPDVASRQFLRQLGNNAPQIPMF 296
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-------NVKWLGLRGDDV--QLIPE-- 287
LVD +P G+AIL T+K+GS + E NV+WLG++ D++ L+ E
Sbjct: 297 VLVDLDPDGIAILSTYKYGSYRLMHEDVALMNTPALSLPNVRWLGVKSDNMSLSLVGEHG 356
Query: 288 ---------QSLLPLKPRDLQIARSLMSSEI-----LQENYKEELSLMVHNGQRAEVEAL 333
Q L+ L RD A ++ ++ L+ +++ EL M+ +AE++ L
Sbjct: 357 TKRKMIHQLQGLMRLTMRDRTKATRMLEWDLCGEDGLERDWRRELQWMLMLNVKAEMQVL 416
>gi|448627572|ref|ZP_21672038.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
gi|445758880|gb|EMA10176.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
Length = 368
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 147/314 (46%), Gaps = 19/314 (6%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ TRS + A+ ++ ++ Q L +++ T REL+Y L +S +
Sbjct: 56 WVYGDRD-STRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTLRELYY--LSESWDLDE 112
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 113 AQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 172
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA++++ VE + RL E+ ++ ++++ G P
Sbjct: 173 VGQGGYQIPNNPDTIEFLD--NDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPA 230
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 231 RATRRLIKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGI 289
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
R +D+ + E PL D+ S + Q ++ +E++ L + ++AE +AL
Sbjct: 290 RPEDI-VEYELPTDPLADSDVNALESELEDPRFQTDFWEEQIELQLDINKKAEQQALASR 348
Query: 337 GYDYL-GKYIAKKI 349
G D++ Y+ +++
Sbjct: 349 GLDFVTDTYLPERL 362
>gi|448739099|ref|ZP_21721117.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
gi|445800248|gb|EMA50606.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
Length = 366
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 155/339 (45%), Gaps = 18/339 (5%)
Query: 23 ISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQI 82
I ++ L R SN + +DV W++ + TRS A+ ++ ++
Sbjct: 32 IPEMELPTRTKSNIEYDEN--SDV-WVYGDRT-STRSANSVRGARKLLKAIYTIDFLADQ 87
Query: 83 LSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-L 139
L +++ T REL+Y + + F+ Q + N+ ++D+ + +R + G
Sbjct: 88 LGEDRSSTLRELYYLSESWDNEEAQFSDQDESNQLVEDLEIVSEVTREDFHMRPEESGAT 147
Query: 140 VAGRLMLQEP---NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
+ G L L+E + I C G GY I + +E LD DA +I+ VE +
Sbjct: 148 LMGPLHLREQTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLD--HDAEFILCVETGGMRD 205
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
RL E+ + +I++ KG P ATR + RL+ DLP++ D +P I +
Sbjct: 206 RLVENGFDDDYGTIVVHLKGQPARATRRITKRLHDEL-DLPVVVFTDGDPWSYRIYGSVA 264
Query: 256 FGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY 314
+GSI + Y +++G++ D+ + + PL D+ S +S Q +Y
Sbjct: 265 YGSIKSAHLSDYLATPEAQFVGIQPTDI-VEYDLPTDPLADSDINALESELSDPRFQTDY 323
Query: 315 -KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQ 351
+E++ L + ++AE +AL G D++ Y+ +++ +
Sbjct: 324 WREQIELQLDIEKKAEQQALASRGLDFVTDTYLPERLTE 362
>gi|448311914|ref|ZP_21501667.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
gi|445603535|gb|ELY57497.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
Length = 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 15/318 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ ++ + L +++ T REL+Y + +
Sbjct: 50 WVYGDRE-STRSANSVRGARKLLKAVYTIDFLAEQLEEDRSSTLRELYYLSESWDNDEAQ 108
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 109 FNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQEDVG 168
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD TDA +I+ VE + RL E+ ++ ++++ KG P A
Sbjct: 169 EGGYQIPNNPDTIEFLD--TDADFILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARA 226
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ LP+ D +P I + +GSI + Y K++G++
Sbjct: 227 TRRITKRLHDELG-LPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQP 285
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + +++E ++L HG
Sbjct: 286 ADI-VEYELPTDPLSDSDVNALESELEDPRFQTDYWEEQIELQLEIEKKSEQQSLASHGL 344
Query: 339 DYL-GKYIAKKIVQADYI 355
D++ Y+ +++ + D I
Sbjct: 345 DFVTDTYLPERLSEMDVI 362
>gi|448323107|ref|ZP_21512571.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
gi|445600293|gb|ELY54306.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
Length = 363
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 15/318 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ +E L Q++ T REL+Y D+ E
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLANQLEQDRSSTLRELYYLSESWDNKEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLD--ADADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLAARGL 345
Query: 339 DYLGK-YIAKKIVQADYI 355
D++ + Y+ +++ + D I
Sbjct: 346 DFVTETYLPERLSEMDVI 363
>gi|307179771|gb|EFN67961.1| Meiotic recombination protein SPO11 [Camponotus floridanus]
Length = 176
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 76 METCFQILSQEKRVTQRELFYKLLCD-SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
M ++L T+R +Y L + + Q ++ + V LL C+ + L ++A
Sbjct: 1 MSEAHRLLLTNTTKTKRSFYYDLKNEITKRLMPHQRSIDCAVNSVANLLECAPWDLRLLA 60
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
+ +GLVAG + + + VIDC+ G G I L + A +++V+EK AIF
Sbjct: 61 TPKGLVAGNMTITLLDNRVIDCAIVG--GVQIPQ--ITLNVTSICVKANFVLVIEKDAIF 116
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTF 254
Q+L E+ + IL+T KGYPD+ TR L++ L+ LP+ +VD +P G+ I+ +
Sbjct: 117 QKLLEEDCSRILKCILVTGKGYPDLNTRMLVNILSEKM-SLPVYIIVDADPFGVDIMLLY 175
Query: 255 K 255
+
Sbjct: 176 R 176
>gi|399216597|emb|CCF73284.1| unnamed protein product [Babesia microti strain RI]
Length = 241
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 37/271 (13%)
Query: 91 QRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
+R + YK FTS QVN+ ++ + L++ + L I S+RG+
Sbjct: 2 ERSIIYKY----KNIFTSSNQVNKYLKRICTLINVCKSDLNISNSNRGIS---------- 47
Query: 151 QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSIL 210
+ CS + S ++S + DA YI+VVEK +IF LT +N +P IL
Sbjct: 48 ---LICSLSIKNNDFTSKNIS-----KMSIDANYILVVEKQSIFHYLTSIKFYNILPCIL 99
Query: 211 ITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY--RY 268
IT G+P TR +L+++ L L L D++P G+ I T+ +EA
Sbjct: 100 ITGSGFPSFDTRNILNKI-ITNTKLAALYLGDYDPYGMLIYLTY--------IEALDCDN 150
Query: 269 ACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSL---MSSEILQEN-YKEELSLMVHN 324
C K+LG+ D++ + + + L D ++ L + I N K+ L M +
Sbjct: 151 ICCFKYLGVTNSDLKSVESANKVKLTNNDKRMIDMLIVRLGDRIATGNKLKQMLVKMKES 210
Query: 325 GQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
+ E+EAL D+L YI KK ++ D I
Sbjct: 211 SFKVEIEALQSICDDFLENYITKKALRNDTI 241
>gi|159126138|gb|EDP51254.1| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus A1163]
Length = 381
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 45/254 (17%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
V++R+++Y P F SQ V+ I D+ + R +L + A ++GLVAG L
Sbjct: 130 VSKRDIYYS----DPACFGSQQIVDTIIDDIAHTIGVDRAALNVEAVAKGLVAGYYRLMT 185
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS 208
E++D +L K ++++++EK A+++RL+ + +
Sbjct: 186 KTGEMVDA------------------RLSTKV-VKWVLILEKEAVYRRLSRSSYHTRAAA 226
Query: 209 IL-ITAKGYPDIATRFLLHRLNRAFPDLP------ILALVDWNPAGLAILCTFKFGSIGM 261
+ KGYPD++TR + RL LP ALVD +P G+AI+ T+K+GS+
Sbjct: 227 GKGVLGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALVDSDPDGMAIMSTYKYGSMAH 286
Query: 262 GMEAYRYACNVK---WLGLRGDDV----QLIPEQSLLPLKPRDLQIARSLMSSEIL---- 310
+ + NV WLGLR DV +++ + L RD + A +++S+ +
Sbjct: 287 AHDNEK--LNVSKLCWLGLRTSDVIGGADSFGDEAFIRLSLRDRKKAVAMLSNNPVWAED 344
Query: 311 --QENYKEELSLMV 322
++ ++ EL M+
Sbjct: 345 GPEQEWRAELQQML 358
>gi|435848696|ref|YP_007310946.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
gi|433674964|gb|AGB39156.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
Length = 363
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L Q++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLANQLEQDRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
FTSQ + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FTSQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLYLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD TDA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLD--TDADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFADGDPWSYRIYASVAYGSIKSAHLSEYLATPEAQYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + +++E ++L G
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELDDPRFQTDYWEEQIELQLEIEKKSEQQSLASRGL 345
Query: 339 DYL 341
D++
Sbjct: 346 DFV 348
>gi|413933050|gb|AFW67601.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 380
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 59/281 (20%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V +GLV
Sbjct: 153 QLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLV 208
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK +FQRL D
Sbjct: 209 MGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLAND 265
Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
+ I+IT + D +L + D
Sbjct: 266 KFCERNRCIVITQLAH-----------------DANLLRVPD------------------ 290
Query: 261 MGMEAYRYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NYK 315
++WLG+ D + +P+ LL L P D + A +++ L ++
Sbjct: 291 -----------IRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREAPEWR 339
Query: 316 EELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
EL M+ G + E+EAL + +L +YI +KI Q ++
Sbjct: 340 SELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQGMHL 380
>gi|91773183|ref|YP_565875.1| DNA topoisomerase VI subunit A [Methanococcoides burtonii DSM 6242]
gi|91712198|gb|ABE52125.1| DNA topoisomerase, type VI subunit A [Methanococcoides burtonii DSM
6242]
Length = 373
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 12/281 (4%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVA- 141
L+Q++ T REL+Y F Q + NR I+D+ + R + G
Sbjct: 97 LAQDRGSTLRELYYISENWDIAKFREQAESNRLIEDLEIITSLQREYFHMRPEEDGATMF 156
Query: 142 GRLMLQEPNQE---VIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G + ++E + +I C G SGY I ++ +E LD DA++II +E ++ RL
Sbjct: 157 GPIRIREETKRGSRIIHCQEDIGESGYQIPFNVENIEFLD--HDAKFIIAIETGGMYARL 214
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ + +IL+ KG P +TR L+ R+N +P++ D +P I + +G
Sbjct: 215 IENGFDEKYNAILVHLKGQPARSTRRLIKRMNEELG-IPVVVFTDGDPWSYRIFASVAYG 273
Query: 258 SIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-K 315
+I + + K++G++ D+ + E S L +D+ RS ++ +Y K
Sbjct: 274 AIKSAHLSEFMATPAAKFIGVQPTDI-VEYELSTDKLTDKDVDALRSELTDPRFANDYWK 332
Query: 316 EELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQADYI 355
E++SL + ++AE +A G D++ Y+ ++ + D I
Sbjct: 333 EQISLQLSIKKKAEQQAFAGKGLDFVTDTYLPNRLSEMDII 373
>gi|339251714|ref|XP_003372879.1| carboxypeptidase B [Trichinella spiralis]
gi|316968726|gb|EFV52961.1| carboxypeptidase B [Trichinella spiralis]
Length = 827
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 89/151 (58%), Gaps = 16/151 (10%)
Query: 133 VASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
++S +GLV G L+ Q N E++DC++ S+ + S + +L T A +I++VEK +
Sbjct: 528 LSSPKGLVLGDLVFQLGNTEIVDCNSI-STIPTRSDEFQVL-----TTSATFILIVEKDS 581
Query: 193 IFQRLTEDFVFNQIPS-ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
IF++L + + + S IL+TAKGYPD TR L +L + LP+ AL+D +P G+ I
Sbjct: 582 IFEKLAMEKANSVLRSAILVTAKGYPDFPTRLFLRKL-YDYLKLPMFALMDADPCGIEIF 640
Query: 252 CTFKFGSIGMGMEAYRYACNV-----KWLGL 277
T+K+G + + +Y NV KW+G+
Sbjct: 641 LTYKYGPMNV---SYESGVNVLLPWMKWIGV 668
>gi|76802378|ref|YP_327386.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
gi|121695453|sp|Q3IPW7.1|TOP6A_NATPD RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|76558243|emb|CAI49831.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
Length = 368
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + TRS A+ ++ +E L Q + T REL+Y + +
Sbjct: 56 WVYGDRT-STRSANSVRGAQKLLKAIYTIEFLADQLEQGRSSTLRELYYLSESWDEERAQ 114
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N+ ++D+ + +R + G + G L L+E + I C G
Sbjct: 115 FNDQDESNQLVEDLEIVSKVTREDFHMRPEESGATIMGPLYLREQTRRGEREIHCQKDVG 174
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ + I++ KG P A
Sbjct: 175 EGGYQIPNNPDTIEFLD--NDADFVLCVETGGMRDRLVENGFDEEHNVIIVHLKGQPARA 232
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y +++G++
Sbjct: 233 TRRITKRLHDDL-DLPVVVFCDGDPWSYRIYASVAYGSIKSAHLSEYLATPEAEYIGIQP 291
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q++Y +E++ L + G++AE +AL G
Sbjct: 292 ADI-VEYDLPTDPLSDSDINALESELDDPRFQDDYWREQIELQLDIGKKAEQQALASRGL 350
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 351 DFVTETYLPERL 362
>gi|409728295|ref|ZP_11271162.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|448721868|ref|ZP_21704411.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|445790940|gb|EMA41590.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
Length = 366
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 145/313 (46%), Gaps = 15/313 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ ++ + L +++ T REL+Y + +
Sbjct: 54 WVYGDRE-STRSANSVRGARKLLKAIYTIDFLAEQLDEDRSSTLRELYYLSESWGEKEAQ 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSACG 160
F+ Q + N+ I+D+ + H +R + G + G L ++E ++E+ G
Sbjct: 113 FSDQDESNQLIEDLEIVSHVTREDFHMRPEESGAKLMGPLRIREQTNRGDREIHCQDDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD TD +++ VE + RL E+ ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFLDHDTD--FVLCVETGGMRDRLVENGFDEDFSTLVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR ++ RL+ DLP++ D +P I + +GSI + Y +++G++
Sbjct: 231 TRRIIKRLHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFIGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S ++ Q +Y +E++ L + G++AE ++L G
Sbjct: 290 ADI-VEYDLPTDPLSDSDINALESELTDPRFQTDYWREQIELQLDIGKKAEQQSLAARGL 348
Query: 339 DYL-GKYIAKKIV 350
D++ Y+ +++
Sbjct: 349 DFVTDTYLPERLT 361
>gi|71483085|gb|AAZ32518.1| DNA topoisomerase VI subunit A [uncultured euryarchaeote Alv-FOS4]
Length = 362
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 12/313 (3%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W + S TRS K + +R +ME ++ +K T RE++Y F
Sbjct: 48 WKY-GDSRITRSAKKLDGGYMILRTLYIMEFIKDMIRTKKSSTLREMYYISEGWDMAKFH 106
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE----VIDC-SACGS 161
SQ + N+ +D+ + R + G V G + ++E N++ I+C G
Sbjct: 107 SQDESNKLAEDLEVITGFMREDFKLRPEEDGASVIGNITVEEINRKGKPMRINCRDDVGD 166
Query: 162 SGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIAT 221
SGY I ++ + + DA ++I +E +F RL E+ + ++L+ KG P +T
Sbjct: 167 SGYLIPYNVENDKLKFVDVDADFVIGIETGGMFDRLVENGFDEKARAVLVHIKGQPARST 226
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGD 280
R LL R+N LP++ D +P I + +G+I + Y +++G+
Sbjct: 227 RRLLKRMNEEL-GLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGITAS 285
Query: 281 DVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYD 339
D+ L + L RD+ ++ + + EE+ LM+ ++AE +AL +G D
Sbjct: 286 DI-LNYDLPTDKLNDRDIAALKAELKDPRFNTPFWNEEIRLMLDIKKKAEQQALAKYGLD 344
Query: 340 YL-GKYIAKKIVQ 351
Y+ Y+ +K+ +
Sbjct: 345 YVTDTYLPEKLTE 357
>gi|452823789|gb|EME30796.1| DNA topoisomerase VI subunit A isoform 1 [Galdieria sulphuraria]
Length = 232
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 19/212 (8%)
Query: 132 IVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
+VA RGL+AG L + N ID SSG SI +E +++TDA++I++VEK+
Sbjct: 2 VVAGPRGLLAGGLRIVFQNGTEIDIGKT-SSGVSIPEAPYEIE--NIQTDAQFIMIVEKN 58
Query: 192 AIFQRLTEDFVFNQIP-SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAI 250
++F LT+ F++ P IL+++ GYP A L L P+ PIL LVD +P G+ I
Sbjct: 59 SVFHHLTQHQFFDRFPKGILLSSSGYPSQAFSDFLVLLRVNCPEAPILFLVDADPYGVHI 118
Query: 251 -LCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRD-------LQIAR 302
LC + ++ + W+G+ +DV+ + + L + RD LQ+ R
Sbjct: 119 ALCHLQ------SLQKEALSSLAFWIGISVEDVERVKYDATLSITARDRAKAQKLLQMLR 172
Query: 303 SLMSSE-ILQENYKEELSLMVHNGQRAEVEAL 333
+ S E ++ EL ++ ++AE+EAL
Sbjct: 173 EVNSIEKTVEAELSSELERILTLEKKAEIEAL 204
>gi|432330700|ref|YP_007248843.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
gi|432137409|gb|AGB02336.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
Length = 364
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 144/304 (47%), Gaps = 16/304 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+ + +A +++ V+ Q L + + T RE++Y F +Q + N I+
Sbjct: 61 RNAASAKSATHLLKMAYVIGFIKQQLRENRSSTLREMYYISEGWKRAKFAAQDESNYLIE 120
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSAC----GSSGYSISGDLSL 172
D+ L R + G + G + ++E + + C G +GY+I +
Sbjct: 121 DLEILSDVPREGFHLHPEENGASIYGPMRIREETRRGMKTIHCQDDVGQAGYTIPNSVEN 180
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
+E +D DA+++I +E ++ RL E+ + +IL+ KG P +TR +L+R++ +
Sbjct: 181 IEFVD--HDAKFVIAIETGGMYDRLIENGFDEEHNAILVHLKGQPARSTRRMLNRMSMTW 238
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQ--LIPEQS 289
DLPIL D +P I + +G+I M ++LGLR D++ +P
Sbjct: 239 -DLPILVFTDGDPWSYRIYGSVAYGAIKSAHMSELLATPKAQFLGLRPSDIRDYNLPSDK 297
Query: 290 LLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAK 347
L +D++ RS ++ +Y K+E++L + ++E +A G D++ K Y+
Sbjct: 298 LT---DKDVEALRSELTDPRFATDYWKKEINLQLEMNLKSEQQAFAARGLDFVTKTYLPA 354
Query: 348 KIVQ 351
++ +
Sbjct: 355 RLAE 358
>gi|171693223|ref|XP_001911536.1| hypothetical protein [Podospora anserina S mat+]
gi|170946560|emb|CAP73361.1| unnamed protein product [Podospora anserina S mat+]
Length = 444
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRE-LFYKLLCDSPEYFTSQLQVNRTIQDVIALLH 124
AK F + ++E + L +T+R L + SP+ F SQ V+ + ++ L
Sbjct: 102 AKKFEALLCIIELSHEALLSGMLITKRSVLIRNIYYQSPDLFGSQAAVDVMVDNLAFTLG 161
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY 184
R L IVA+++GL++G ML + VIDC S+G + S E +
Sbjct: 162 VGRGDLNIVATAKGLISGPFMLISRDGSVIDCGLSHSTGILLP---STSEIRSIGFHEVQ 218
Query: 185 IIVVEKHAIFQRLTED---FVFNQIPSILIT------AKGYPDIATRFLLHRLNRAFPDL 235
I++ +++TE + FN + IT AKG+PD+ATR L ++ P L
Sbjct: 219 WILLNMQRTPEQVTESSSRYGFNITDDVFITKFSVCQAKGFPDLATRRFLSVVHSMRPSL 278
Query: 236 PILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
I L D++P G++I+ T++ GS + E ++ WLG++ D+
Sbjct: 279 VIFGLADFDPDGISIVRTYQNGSRRLEHENEATVPSLCWLGIKSRDL 325
>gi|389852867|ref|YP_006355101.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
gi|388250173|gb|AFK23026.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
Length = 382
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 22/322 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 61 IRMGDKLSKRYFLNVAHARKFMQTLILMAYVKRLVSEGKHASLREAYYANKHTIPGTREN 120
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG + G +++++ E + S G+ G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIKDGEDE-FNASKLGTGGW 179
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y++VVE A+ RL E+ + ++++ +G R L
Sbjct: 180 AVPGTVEHIQFPEINVD--YVLVVETAAMADRLIEEKYPKKERALIVATQGQASRGVRRL 237
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A + K++G+ DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIK 296
Query: 284 LIP-EQSLLPLK--PRDLQIARSLMSSEILQE-NY--------KEELSLMVHNGQRAEVE 331
E LK P D + + I++E NY + +L L + G R E +
Sbjct: 297 EYGLENVTEKLKGIPPDKKGGPTGDYKRIIEELNYPWFQNKEWQRQLKLALKWGVRIEQQ 356
Query: 332 ALYFHGYDYLGK-YIAKKIVQA 352
AL +++ K Y+ +KI +
Sbjct: 357 ALANKSLEFVAKEYLPEKIREG 378
>gi|433638425|ref|YP_007284185.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
gi|433290229|gb|AGB16052.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
Length = 366
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 141/305 (46%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDS----P 103
W++ S TRS + A+ ++ ++ L +++ T REL+Y L +S
Sbjct: 54 WVYGDRS-STRSAKTVSGAQKLLKATYTIDFLANQLEEDRSSTLRELYY--LSESWDLDE 110
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 111 AQFNTQDESNNLIEDLEIVSEVKREDFHMRPEESGAKVMGPLLLREQTRRGDREIHCQKD 170
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA +++ VE + RL E+ ++ SI++ G P
Sbjct: 171 VGQGGYQIPNNPDTIEFLD--NDADFVLAVETGGMRDRLVENGFDDEYNSIVVHLGGQPA 228
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ R+ DLP++ D +P I + +GSI + Y + +++G+
Sbjct: 229 RATRRLIKRMRNEL-DLPVVVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPDAQYIGI 287
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFH 336
R +D+ + + PL D+ S + Q E ++E++ L + +++E ++L
Sbjct: 288 RPEDI-VEYDLPTDPLSDSDVNALESELEDPRFQTEFWEEQIELQLEIEKKSEQQSLAAR 346
Query: 337 GYDYL 341
G D++
Sbjct: 347 GLDFV 351
>gi|336254127|ref|YP_004597234.1| type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
gi|335338116|gb|AEH37355.1| Type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
Length = 363
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 144/312 (46%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E + L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLAEQLDEDRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+SQ + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSSQDESNSLVEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQKDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD DA +I+ VE + RL E+ ++ ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIDFLDC--DADFILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + +++E ++L HG
Sbjct: 287 ADI-VEYELPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIEKKSEQQSLASHGL 345
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 346 DFVTETYLPERL 357
>gi|240103483|ref|YP_002959792.1| DNA topoisomerase VI subunit A [Thermococcus gammatolerans EJ3]
gi|239911037|gb|ACS33928.1| Type II DNA topoisomerase VI, subunit A (Top6A) [Thermococcus
gammatolerans EJ3]
Length = 386
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 65 IKMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVSEGKHASLREAYYANKHTIPGTREN 124
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG + G +++++ E + S GS G+
Sbjct: 125 TFEDQRESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIRDGEDE-FNASKLGSGGW 183
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 184 AVPGTVEHIQFPEINVD--YALVVETAAMADRLIEEKFPKKENALIIATQGQASRGVRRL 241
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A +++G+ DD++
Sbjct: 242 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEARFVGMTMDDIK 300
Query: 284 LIP-EQSLLPLK--PRDLQIARSLMSSEILQE---------NYKEELSLMVHNGQRAEVE 331
E LK P + + + IL+E ++ +L L + G R E +
Sbjct: 301 RYGLENVTEKLKGIPPNKKGGPTGDYKRILEEMEYPWFQNREWQRQLKLALKWGVRIEQQ 360
Query: 332 ALYFHGYDYLGK-YIAKKIVQAD 353
AL +++ K Y+ +KI D
Sbjct: 361 ALANKSLEFVAKEYLPEKINSGD 383
>gi|18977950|ref|NP_579307.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus DSM 3638]
gi|397652071|ref|YP_006492652.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
gi|22654150|sp|Q8U0K9.1|TOP6A_PYRFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|18893722|gb|AAL81702.1| type II DNA topoisomerase subunit a [Pyrococcus furiosus DSM 3638]
gi|393189662|gb|AFN04360.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
Length = 382
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I L R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 61 IKLGDKLSRRYFLNVAHARKFMQTLILMAYVKRLVSEGKHASLREAYYANKHTIPGTHEN 120
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG V G +++++ E + S G G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYVYGDIVIKDGEDE-FNASKLGMGGW 179
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y++VVE A+ RL E+ + +++I +G R L
Sbjct: 180 AVPGTVEHIQFPEINVD--YVLVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRRL 237
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A + K++G+ DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIK 296
>gi|322370368|ref|ZP_08044927.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
gi|320550076|gb|EFW91731.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
Length = 364
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ ++ L +++ T REL+Y D+ E
Sbjct: 52 WVYGDRK-STRSANSVRGARKLLKAVYTIDFLTNQLEEDRSSTLRELYYLSESWDADEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSACG 160
F++Q + N+ I+D+ + +R + G V G L+L+E ++E+ G
Sbjct: 111 FSTQDESNQLIEDLEIVSEVTREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ + +I++ G P A
Sbjct: 171 QGGYQIPNNPDTIEFLD--NDADFVLCVETGGMRDRLVENGFDEEYNTIIVHLGGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L RL+ DLP+ D +P I + +GSI + Y K++G++
Sbjct: 229 TRRLTKRLHEEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSDYLATPEAKFIGIQP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D S + Q +Y +E++ L + +++E +AL HG
Sbjct: 288 KDI-VEYDLPTDPLSDSDKNALESELEDPRYQTDYWEEQIELQLDIEKKSEQQALASHGL 346
Query: 339 DYL 341
D++
Sbjct: 347 DFV 349
>gi|290985411|ref|XP_002675419.1| type IIB DNA topoisomerase [Naegleria gruberi]
gi|284089015|gb|EFC42675.1| type IIB DNA topoisomerase [Naegleria gruberi]
Length = 1251
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 165/388 (42%), Gaps = 79/388 (20%)
Query: 1 VRARIEVSVINFLK-ILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRS 59
VR RIE V+ F++ +++SP SD+P N K F +
Sbjct: 6 VRERIEEKVLAFVRELVSSPS---SDIP--NEKG---------------------FLLKD 39
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
LTK F+ ++VM +Q+ + K T+R+L+Y C+ P Q Q++ ++D+
Sbjct: 40 LTK--YPSTFISKFQVMNLVYQLCTLNKFSTKRDLYY---CNKP-ILKDQTQLDSILKDL 93
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLML------------QEPNQEVIDCSACGSSGYSIS 167
+ +R L IV S+G V G + Q+P ++ S G + SI
Sbjct: 94 SSSWRVNRHDLHIVPQSKGEVCGPIAWKEISLIDIENRGQQPTTTIVSASK-GCNLPSIP 152
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L ++E + + +I+VEK ++FQ L + S++IT+KGYPD+ TR +
Sbjct: 153 H-LQIVE-FSIPVEVDKVIIVEKESVFQVLKSQASSLKDTSLIITSKGYPDVPTRDFIVT 210
Query: 228 LNRAFP-----DLPILALVDWNPAGLAILCTFKFGSIGM--------------GMEAYRY 268
L + L I L D +P G I + GS+ E + Y
Sbjct: 211 LTKQVAKYQRRSLNIFTLTDGDPYGAEIANVYMNGSLSFENEKENLTIHSCVDSTEDWHY 270
Query: 269 ----ACN-VKWLGLRGDDVQLIPE------QSLLPLKPRDLQIARSLMSSEI-LQENYKE 316
C+ + W+G+ +D P+ +PL+ DL+ SL ++++ L + K
Sbjct: 271 WVLQTCSRMSWIGVHLNDFDNAPQLISKWKDCWMPLEELDLKKINSLNNTQLELDDTVKT 330
Query: 317 ELSLMVHNGQRAEVEALYFHGYDYLGKY 344
+++L + E+E DY Y
Sbjct: 331 QINLQKDLNYKVEIEESSETDSDYCEAY 358
>gi|300711732|ref|YP_003737546.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|448296159|ref|ZP_21486220.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|299125415|gb|ADJ15754.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|445582882|gb|ELY37222.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
Length = 363
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 15/316 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + TRS A+ ++ ++ L +++ T REL+Y + +
Sbjct: 51 WVYGDRT-STRSANSVRGARKLLKAIYTIDFLADQLGEDRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N+ ++D+ + +R + G + G L L+E + VI C G
Sbjct: 110 FNDQDESNQLVEDLEIVSSVTREDFHMRPEESGATLMGPLELREQTRRGERVIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ + I++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLD--NDADFVLAVETGGMRDRLVENGFDEEYNVIIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ + + Q +Y E++ L + G++AE +AL G
Sbjct: 287 TDI-VEYDLPTDPLSDSDVNALENELEDPRFQTDYWTEQIELQLEIGKKAEQQALASRGL 345
Query: 339 DYL-GKYIAKKIVQAD 353
D++ Y+ +++ D
Sbjct: 346 DFVTDTYLPERLAAMD 361
>gi|146174859|ref|XP_001019494.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila]
gi|146144754|gb|EAR99249.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila
SB210]
Length = 650
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N K+ ++ ++ L + ++T+RE+FY + + +Q + + IQ + L
Sbjct: 220 NNLKSLEKLLFCIKQILNALKNDFQITKREIFY---TNVELFDQNQQNLEKIIQILQNQL 276
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQ-EVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
R L I+AS++GLV G + Q +Q E ID S I +L ++T++
Sbjct: 277 RLPRNCLNIIASAKGLVTGNVQFQVSSQAEFIDLSKNFGEVRQIQPKEEILW---IETNS 333
Query: 183 RYIIVVEKHAIFQRL----TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+I+VVEK +FQ++ E + N I+IT KGY D +T+ + L P+ P+
Sbjct: 334 AFILVVEKETVFQKIIAEKDEQLLKN---CIMITGKGYGDYSTKQYIKMLTANNPNSPLF 390
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQS 289
L D++P GL IL + FGS + N+ +LGL D+ +QS
Sbjct: 391 YLGDFDPFGLDILFNYTFGSENSVYQQDNLP-NIHFLGLSSFDILDFNQQS 440
>gi|154151278|ref|YP_001404896.1| DNA topoisomerase VI subunit A [Methanoregula boonei 6A8]
gi|153999830|gb|ABS56253.1| Spo11/DNA topoisomerase VI, subunit A [Methanoregula boonei 6A8]
Length = 362
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 143/295 (48%), Gaps = 15/295 (5%)
Query: 58 RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
R+ + +A +++ V+ Q L + + T RE++Y F +Q + N ++
Sbjct: 61 RTAATAKSATHLLKMAYVIGFVKQQLIENRSSTLREMYYISEGWKRAKFGAQDESNFLVE 120
Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSAC----GSSGYSISGDLSL 172
D+ + R + G + G + ++EP + + C GS+GYSI ++
Sbjct: 121 DLEIISDVPREGFHLRPEENGASIYGPMRIREPTRRGLKMIHCQDDVGSAGYSIPNNVEN 180
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
LE +D DA+++I +E ++ RL E+ + +IL+ KG P +TR LL+R+++ +
Sbjct: 181 LELVD--HDAKFVIAMETGGMYDRLIENGFDEEHNAILLHLKGQPARSTRRLLNRISQTW 238
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQ--LIPEQS 289
+LPIL D +P I + +G+I M ++LGL+ D++ +P
Sbjct: 239 -NLPILVFTDGDPWSYRIYASVAYGAIKSAHMSELLATPKAQFLGLQPSDIRDYNLPSDK 297
Query: 290 LLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYLGK 343
L +D++ + ++ +Y K++++L + G ++E +A G D++ K
Sbjct: 298 ---LSDKDVEALNAELTDPRFATDYWKKQINLQLELGLKSEQQAFAARGLDFVTK 349
>gi|448330003|ref|ZP_21519296.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
gi|445612991|gb|ELY66706.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
Length = 363
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 141/314 (44%), Gaps = 15/314 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E + L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAIYTIEFLSEQLEEDRSSTLRELYYLSESWDNDEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATIMGPLYLREQTRRGERKIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIDFLDC--DADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + G+++E ++L HG
Sbjct: 287 ADI-VEYELPTDPLADSDINALESELEDPRFQTDYWEEQIELQLDLGKKSEQQSLASHGL 345
Query: 339 DYL-GKYIAKKIVQ 351
D++ Y+ +++ +
Sbjct: 346 DFVTDTYLPERLSE 359
>gi|223478247|ref|YP_002582502.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
gi|214033473|gb|EEB74300.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
Length = 386
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++++ K + RE +Y P
Sbjct: 65 IRMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVAEGKHASLREAYYANKHTIPGTKEN 124
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG + G +++++ E + S GS G+
Sbjct: 125 TFEDQRESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIRDGEDE-FNASKLGSGGW 183
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 184 AVPGTVEHIQFPEINVD--YALVVETAAMADRLIEEKFPKKEKALIIATQGQASRGVRRL 241
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 242 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIK 300
Query: 284 LIP-EQSLLPLK--PRDLQIARSLMSSEILQE---------NYKEELSLMVHNGQRAEVE 331
E LK P + + + IL+E ++ +L + + G R E +
Sbjct: 301 RYGLENVTEKLKGIPPNKKGGPTGDYKRILEEMEYPWFQNREWQRQLKMALKWGVRIEQQ 360
Query: 332 ALYFHGYDYLGK-YIAKKIVQAD 353
AL +++ K Y+ +KI D
Sbjct: 361 ALANKSLEFVAKEYLPEKINSGD 383
>gi|389847082|ref|YP_006349321.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|448614969|ref|ZP_21663997.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|388244388|gb|AFK19334.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|445753056|gb|EMA04475.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
Length = 366
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ + TRS A+ ++ +E + L +++ T REL+Y D+ E +
Sbjct: 54 WVYGDRT-STRSANSVRGARKLLKAAYTIEFLARQLEEDRSSTLRELYYLSESWDAEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + +R + G + G L L+E + I C G
Sbjct: 113 FSGQDESNQLIEDLEIVSEVTREDFHMRPEESGATLMGPLELREQTRRGERDIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD D +++ VE + RL E+ Q +++ KG P A
Sbjct: 173 EGGYQIPNNPDTIQFLDHDID--FVLCVETGGMRDRLIENGFDEQYNVLIVHLKGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + +KE++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMTDYWKEQIELQLDIGKKAEQQALAARGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|345005806|ref|YP_004808659.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
gi|344321432|gb|AEN06286.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
Length = 366
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E L +++ T REL+Y + +
Sbjct: 54 WVYGDRT-SNRSANSVGGARKLLKAAYTIEFLANQLDEDRSSTLRELYYLSESWDNEEAQ 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N ++D+ + +R L + G + G L L+E + I C G
Sbjct: 113 FSGQDESNSLVEDLEIVTGVTREDLHMRPEESGATLMGPLELREQTRRGEREIHCQKDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD + D +++ VE + RL E+ ++ +++ KG P A
Sbjct: 173 EGGYQIPNNPDTIEFLDHEID--FVMCVETGGMRDRLIENGFDDEHNCLVVHLKGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR ++ RL+ DLP+L D +P I + +GSI + Y ++G+R
Sbjct: 231 TRRIIKRLHDEL-DLPVLVFCDGDPWSYRIYGSVAYGSIKSAHLSEYLATPGADYVGIRP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S +S Q E ++E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALESELSDPRFQTEFWEEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|189207094|ref|XP_001939881.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975974|gb|EDU42600.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 435
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 63/298 (21%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ A F + +++E L + +T+R+++Y+ P+ F Q V+R + D+
Sbjct: 148 AQEAWNFTVLLRILELIHGGLVDDTMMTKRDIYYR----HPDLFVRQSVVDRYVDDLACT 203
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
+R L + G L+ + +D S +
Sbjct: 204 FGITRSQLNV---------GMLVPIVGENDTLDLS-----------------------EV 231
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
+++V+EK A F+ L + + S +++TAKGYPD+A+R L ++ P +P+
Sbjct: 232 HWVLVIEKEATFRSLMASPQWGSLGSYGVILTAKGYPDVASRNFLRQMVDCAPHVPMYVF 291
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYA-------CNVKWLGLRG----------DDVQ 283
VD +P G+AIL T+K+GS + EA N++WLG++ DD +
Sbjct: 292 VDLDPEGIAILSTYKYGSYRLAHEAVTPTDTPAISLPNIRWLGVKSHHMSRTPVGEDDTE 351
Query: 284 --LIPE-QSLLPLKPRDLQIARSLMSSEILQEN-----YKEELSLMVHNGQRAEVEAL 333
+P+ Q L+ L RD A ++ + E+ +++EL M+ +AE++ L
Sbjct: 352 PSAMPQLQGLMKLTARDRTKAARMLEWNLCAEDGPEQGWRQELQKMLMFNIKAEMQIL 409
>gi|448591217|ref|ZP_21650896.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
gi|445733773|gb|ELZ85338.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
Length = 366
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ + TRS A+ ++ +E + L +++ T REL+Y D+ E +
Sbjct: 54 WVYGDRT-STRSANSVRGARKLLKAAYTIEFLARQLEEDRSSTLRELYYLSESWDAEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N+ I+D+ + +R + G + G L L+E + I C G
Sbjct: 113 FSDQDESNQLIEDLEIVSEVTREDFHMRPEESGATLMGPLELREQTRRGEREIHCQKDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD D +++ VE + RL E+ + ++++ KG P A
Sbjct: 173 EGGYQIPNNPDTIEFLDHDID--FVMCVETGGMRDRLIENGFDDDYNALIVHLKGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL DLP++ D +P I + +GSI + Y + +++G++
Sbjct: 231 TRRITKRLRNEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDARFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLSDSDINALESELEDPRFMSDYWTEQIELQLDIGKKAEQQALAARGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|7994697|sp|O59209.2|TOP6A_PYRHO RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 382
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I L R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 61 IRLGDRLSRRYFLNVAHARKFMQTLILMAYIKRLVSEGKHASLREAYYANKHTVPGTREN 120
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG + G +++++ E + S G+ G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIKDGEDE-FNASKLGTGGW 179
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y++VVE A+ RL E+ + +++ +G R L
Sbjct: 180 AVPGTVEHIQFPEINVD--YVLVVETAAMADRLIEEKYPKRENCLIVATQGQASRGVRRL 237
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A + K++G+ DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIK 296
>gi|448399836|ref|ZP_21571069.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
gi|445668289|gb|ELZ20919.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
Length = 363
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 15/314 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEADRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQKDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD DA +I+ VE + RL E+ ++ ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIDFLDC--DADFILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E +AL HG
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLDLGKKSEQQALASHGL 345
Query: 339 DYLGK-YIAKKIVQ 351
D++ + Y+ +++ +
Sbjct: 346 DFVTETYLPERLTE 359
>gi|448361959|ref|ZP_21550572.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
gi|445649639|gb|ELZ02576.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
Length = 363
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLTDQLEEDRSSTLRELYYLSESWDNDNAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCS-ACG 160
FTSQ + N ++D+ + +R + G V G L ++E + I C G
Sbjct: 110 FTSQDESNSLVEDLEIVSGVTREDFHMRPEESGAKVMGPLHIREQTKRGDRDIHCQLDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++E LD DA +++ VE + RL E+ + +I++ G P A
Sbjct: 170 QGGYQIPNNPDMIEFLD--NDAEFVLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R + LP++ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRLTKRFHDELG-LPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L HG
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLASHGL 345
Query: 339 DYL 341
D++
Sbjct: 346 DFV 348
>gi|448576109|ref|ZP_21642152.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
gi|445729789|gb|ELZ81383.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
Length = 366
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 139/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ + TRS A+ ++ +E + L +++ T REL+Y D+ E +
Sbjct: 54 WVYGDRT-STRSANSVRGARKLLKAAYTIEFLARQLEEDRSSTLRELYYLSESWDAEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N+ I+D+ + +R + G + G L L+E + I C G
Sbjct: 113 FSGQDESNQLIEDLEIVSEVTREDFHMRPEESGATLMGPLELREQTRRGEREIHCQKDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD D +++ VE + RL E+ + ++++ KG P A
Sbjct: 173 EGGYQIPNNPDTIEFLDHDID--FVMCVETGGMRDRLIENGFDDDYNALIVHLKGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL DLP++ D +P I + +GSI + Y + +++G++
Sbjct: 231 TRRITKRLRNEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDARFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLSDSDINALESELDDPRFMSDYWTEQIELQLDIGKKAEQQALAARGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|448302924|ref|ZP_21492874.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
gi|445593931|gb|ELY48098.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
Length = 363
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 145/314 (46%), Gaps = 15/314 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + ++
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLANQLEEDRSSTLRELYYLSESWDNNEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGERDIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ ++ ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDC--DADFILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR ++ RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRIIKRLHDEL-DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPAAQYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLAARGL 345
Query: 339 DYLGK-YIAKKIVQ 351
D++ + Y+ +++ +
Sbjct: 346 DFVTETYLPERLSE 359
>gi|340345432|ref|ZP_08668564.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520573|gb|EGP94296.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 368
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L +S RS S+ ++F ++ + ++ ++K T R+++Y + E F Q
Sbjct: 64 LGNSAAVRSSRNSSQLRSFTQLMWLAFFANRLTQEKKSSTLRDVYYSSQAFAIE-FEDQS 122
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+L R I R + G L ++ P E + GY+I
Sbjct: 123 ESDNIIVDLEAVLSKPREDFHIFPEERSSIFGDLNIEYTIPGYEGKKMNLSNHPDGYAIG 182
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E LD T A +I +EK +F R E+ V + SI+I G +TR LL R
Sbjct: 183 PSLTTAELLD--TSAEIVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKR 240
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 241 LHDEL-GLPVIILTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKF-K 298
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L + QE +K+EL + + ++AE+EA +G + KY+
Sbjct: 299 LPTIPMTESDIKRCYDLQTDPRYQEGIWKKELDVFLKIKRKAELEAFSKYGLTNITDKYL 358
Query: 346 AKKI 349
+K+
Sbjct: 359 PQKL 362
>gi|341581302|ref|YP_004761794.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
gi|340808960|gb|AEK72117.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
Length = 386
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 147/323 (45%), Gaps = 22/323 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 65 IRMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVSENKHASLREAYYANKHTIPGTKEN 124
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ ++ R + + A RG + G +++++ E + S G G+
Sbjct: 125 TFEDQRESDPIIEDLERMMGVLREEMHLTADRRGYIYGDIVIRDGEDE-FNTSKLGMGGW 183
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + L+ +++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 184 AVPGTVEHLQFVEVNVD--YALVVETAAMADRLIEEKFPKKENALIIATQGQASRGVRRL 241
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 242 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIE 300
Query: 284 LIPEQSL---LPLKPRDLQIARSLMSSEILQE---------NYKEELSLMVHNGQRAEVE 331
+++ L P + + + IL+E ++ +L + + G R E +
Sbjct: 301 RYGLKNVTEKLKGIPPNKKGGPTADYKRILEEMEYPWFQNKEWQRQLKMAIKMGVRIEQQ 360
Query: 332 ALYFHGYDYLG-KYIAKKIVQAD 353
AL +++ KY+ +KI +
Sbjct: 361 ALANKSLEFVAKKYLPEKINNGE 383
>gi|448309742|ref|ZP_21499597.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
gi|445589408|gb|ELY43641.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
Length = 363
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 145/314 (46%), Gaps = 15/314 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + ++
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLANQLEEDRSSTLRELYYLSESWDNNEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGERDIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ ++ ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDC--DADFILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR ++ RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRIIKRLHDEL-DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPAAQYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLAARGL 345
Query: 339 DYLGK-YIAKKIVQ 351
D++ + Y+ +++ +
Sbjct: 346 DFVTETYLPERLSE 359
>gi|212223912|ref|YP_002307148.1| DNA topoisomerase VI subunit A [Thermococcus onnurineus NA1]
gi|212008869|gb|ACJ16251.1| type II DNA topoisomerase VI, subunit A [Thermococcus onnurineus
NA1]
Length = 386
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 65 IKMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVSEGKHASLREAYYANKHTIPGTKEN 124
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + + A RG + G +++++ E + S G G+
Sbjct: 125 TFEDQRESDPIIEDLERMLGVLREEMHLTADRRGYIYGDIVIRDGEDE-FNTSKLGMGGW 183
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + L+ +++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 184 AVPGTVEHLQFVEVNVD--YALVVETAAMADRLIEEKFPKKENALIIATQGQASRGVRRL 241
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 242 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIE 300
>gi|448391960|ref|ZP_21567055.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
gi|445665372|gb|ELZ18050.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
Length = 363
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 143/314 (45%), Gaps = 15/314 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS + A+ ++ ++ + L Q++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVSGARKLLKATYTIDFLVEQLEQDRSSTLRELYYLSESWDNDEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCS-ACG 160
FTSQ + N ++D+ + +R + G V G L ++E + I C G
Sbjct: 110 FTSQDESNSMVEDLEIVSGVTREDFHMRPEESGAKVMGPLHIREQTKRGDRDIHCQLDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++E LD DA +++ VE + RL E+ + +I++ G P A
Sbjct: 170 QGGYQIPNNPDMIEFLD--NDADFVLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R + LP++ D +P I + +GSI + Y K++G++
Sbjct: 228 TRRLTKRFHDELG-LPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + +++E ++L HG
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLDIEKKSEQQSLASHGL 345
Query: 339 DYL-GKYIAKKIVQ 351
D++ Y+ +++ +
Sbjct: 346 DFVTDTYLPERLSE 359
>gi|57640733|ref|YP_183211.1| DNA topoisomerase VI subunit A [Thermococcus kodakarensis KOD1]
gi|90110665|sp|Q5JH82.1|TOP6A_PYRKO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|57159057|dbj|BAD84987.1| type II DNA topoisomerase VI, subunit A [Thermococcus kodakarensis
KOD1]
Length = 385
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 64 IKMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVSEGKHASLREAYYANKHTIPGTREN 123
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ + R + I A RG + G +++++ E + S GS G+
Sbjct: 124 TFEDQSESDPIIEDLERMFGVLREEMHITADRRGYIYGDIVIRDGEDE-FNASRLGSGGW 182
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 183 AVPGTVEHIQFPEINVD--YALVVETAAMADRLIEEKFPKRENALIIATQGQASRGVRRL 240
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 241 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPESKFVGMTMDDIK 299
Query: 284 LIP-EQSLLPLK--PRDLQIARSLMSSEILQE-NY--------KEELSLMVHNGQRAEVE 331
E LK P + + + IL+E NY + +L L + G R E +
Sbjct: 300 KYGLENVTEKLKGIPPNKKGGPTGDYKRILEEMNYPWFQNKEWQRQLQLALKWGVRIEQQ 359
Query: 332 ALYFHGYDYLGK-YIAKKIVQAD 353
AL +++ K Y+ +KI D
Sbjct: 360 ALANKSLEFVAKEYLPEKINNGD 382
>gi|332157795|ref|YP_004423074.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
gi|331033258|gb|AEC51070.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
Length = 380
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I L R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 59 IKLGDRLSKRYFLNVAHARKFMQTLILMAYIKRLVSEGKHASLREAYYANKHTIPGTKEN 118
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG + G +++++ E + S G+ G+
Sbjct: 119 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIKDGEDE-FNASKLGTGGW 177
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y++VVE A+ RL E+ + +++ +G R L
Sbjct: 178 AVPGTVEHIQFPEVNVD--YVLVVETAAMADRLIEEKYPKRENCLIVATQGQASRGVRRL 235
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A + K++G+ DD++
Sbjct: 236 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIK 294
>gi|399574436|ref|ZP_10768195.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
gi|399240268|gb|EJN61193.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
Length = 364
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + TRS A+ ++ ++ + L +++ T REL+Y + +
Sbjct: 52 WVYGDRT-STRSANSVRGARKLLKAVYTIDFLAKQLDEDRSSTLRELYYLSESWDNEEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N+ ++D+ + +R + G + G L L+E + I C G
Sbjct: 111 FSDQDESNQLVEDLEIVSKVTREDFHMRPEESGATLMGPLELREQTRRGEREIHCQKDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD D +++ VE + RL E+ + +++ KG P A
Sbjct: 171 EGGYQIPNNPDTIEFLDHDID--FVLCVETGGMRDRLVENGFDEEYNVLVVHLKGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y +++G+R
Sbjct: 229 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAEYVGIRP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S ++ Q E +KE++ L + G++AE +AL G
Sbjct: 288 QDI-VDYDLPTDPLADSDINALESELTDPRFQSEFWKEQIELQLDIGKKAEQQALASRGL 346
Query: 339 DYL 341
D++
Sbjct: 347 DFV 349
>gi|448348507|ref|ZP_21537356.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|448369502|ref|ZP_21556054.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
gi|445642874|gb|ELY95936.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|445650677|gb|ELZ03593.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
Length = 363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNDNAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEV---IDCS-ACG 160
FTSQ + N ++D+ + +R + G V G L ++E + I C G
Sbjct: 110 FTSQDESNSLVEDLEIVSGVTREDFHMRPEESGAKVMGPLHIREQTKRGDRDIHCQLDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++E LD DA +++ VE + RL E+ + +I++ G P A
Sbjct: 170 QGGYQIPNNPDMIEFLD--NDADFVLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R + LP++ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRLTKRFHDELG-LPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L HG
Sbjct: 287 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLASHGL 345
Query: 339 DYL 341
D++
Sbjct: 346 DFV 348
>gi|448298523|ref|ZP_21488551.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
gi|445591193|gb|ELY45399.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
Length = 363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ +E + L Q++ T REL+Y D+ E
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLAEQLEQDRSSTLRELYYLSESWDNKEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQKDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L +DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFL--SSDADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR ++ RL+ +LP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRIIKRLHDEL-ELPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQYIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 287 ADI-VEYELPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLAARGL 345
Query: 339 DYL 341
D++
Sbjct: 346 DFV 348
>gi|337283840|ref|YP_004623314.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
gi|334899774|gb|AEH24042.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
Length = 382
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 61 IRMGDKLSRRYFLNVAHARKFMQTLLLMAYIKRLVSEGKHASLREAYYANKHTIPGTREN 120
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG V G +++++ E + S G G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGILREEMHITADRRGYVYGDIVIKDGEDE-FNASKLGMGGW 179
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y++VVE A+ RL E+ + +++I +G R L
Sbjct: 180 AVPGTVEHIQFPEINVD--YVLVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRRL 237
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPGAKFVGMTMDDIK 296
>gi|14520811|ref|NP_126286.1| DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
gi|13124622|sp|Q9V134.1|TOP6A_PYRAB RecName: Full=Type II DNA topoisomerase VI subunit A
gi|5458027|emb|CAB49517.1| Top6A DNA topoisomerase VI, subunit A [Pyrococcus abyssi GE5]
gi|380741353|tpe|CCE69987.1| TPA: DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
Length = 382
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I L R A+ F + +M +++S+ K + RE +Y P
Sbjct: 61 IKLGDKLSRRYFLNVAHARKFTQTLILMAYIKRLVSEGKHASLREAYYANKHTIPGTREN 120
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + I A RG + G +++++ E + S G+ G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIKDGEDE-FNASKLGTGGW 179
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ ++ D Y++VVE A+ RL E+ + +++ +G R L
Sbjct: 180 AVPGTVEHIQFPEVNVD--YVLVVETAAMADRLIEEKYPKKENCLIVATQGQASRGVRRL 237
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A + K++G+ DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIK 296
>gi|448373989|ref|ZP_21557874.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
gi|445660666|gb|ELZ13461.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
Length = 366
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDS----P 103
W++ S TRS + A+ ++ ++ L +++ T REL+Y L +S
Sbjct: 54 WVYGDRS-STRSAKTVSGAQKLLKATYTIDFLANQLEEDRSSTLRELYY--LSESWDLDE 110
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F +Q + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 111 AQFNTQDESNNLIEDLEIVSEVKREDFHMRPEESGAKVMGPLLLREQTRRGDREIHCQKD 170
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E L + DA +++ VE + RL E+ ++ SI++ G P
Sbjct: 171 VGQGGYQIPNNPDTIEFL--ENDADFVLAVETGGMRDRLVENGFDDEYNSIVVHLGGQPA 228
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L+ R+ DLP++ D +P I + +GSI + Y + +++G+
Sbjct: 229 RATRRLIKRMRNEL-DLPVVVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPDAQYIGI 287
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFH 336
R +D+ + + PL D+ S + Q E ++E++ L + +++E ++L
Sbjct: 288 RPEDI-VEYDLPTDPLSDSDVNALESELEDPRFQTEFWEEQIELQLEIEKKSEQQSLAAR 346
Query: 337 GYDYL 341
G D++
Sbjct: 347 GLDFV 351
>gi|390962072|ref|YP_006425906.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
gi|390520380|gb|AFL96112.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
Length = 386
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R A+ F++ +M +++S+ K + RE +Y P
Sbjct: 65 IRMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVSENKHASLREAYYANKHTIPGTKEN 124
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ ++ R + + A RG + G +++++ E + S G G+
Sbjct: 125 TFEDQRESDPIIEDLERMMGVLREEMHLTADRRGYIYGDIVIRDGEDE-FNTSKLGMGGW 183
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + L+ +++ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 184 AVPGTVEHLQFVEVNVD--YALVVETAAMADRLIEEKFPRKENALIIATQGQASRGVRRL 241
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 242 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIE 300
>gi|383624785|ref|ZP_09949191.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|448697205|ref|ZP_21698283.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|445781584|gb|EMA32436.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
Length = 363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L + + T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLDEGRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N+ ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSDQDESNQLVEDLEIVSGATREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQKDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ ++ ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDC--DADFILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + +++E ++L HG
Sbjct: 287 ADI-VEYELPTDPLSDSDVNALESELEDPRFQTDYWEEQIELQLEIEKKSEQQSLASHGL 345
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 346 DFVTETYLPERL 357
>gi|261328406|emb|CBH11383.1| meiotic recombination protein spo11, putative [Trypanosoma brucei
gambiense DAL972]
Length = 448
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 117/285 (41%), Gaps = 74/285 (25%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
TQR+++Y+L+ +F Q VNR I ++ L R LG+V +RG V G L
Sbjct: 159 TQRDVYYRLV----RFFPDQGCVNRVIPQLVQQLGLPRQLLGVVPGTRGCVGGSLSFH-- 212
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSI 209
G G + V + + R E+ +F+++ +
Sbjct: 213 -------------GIDYGGTR---------------LRVFHYLFYGRNMEEKIFDRVSCV 244
Query: 210 LITAKGYPDIATRFLLHRLNRAFPDL--PILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
L+T+ G+P A LL L+R D+ P++ALVD+NP+GL+IL +K + + Y
Sbjct: 245 LLTSHGFPTAAALTLLSNLHRTATDVGVPVVALVDYNPSGLSILQQYKHDTGRIQENRYA 304
Query: 268 YACNVKWLGLR------------------------GDDVQLIPEQSLLPLKP-------- 295
+++WLGLR GD V IP + LP +P
Sbjct: 305 SVHSLRWLGLRGCHVLHDGSTEVTDSQCLSSGIHAGDAVGHIPRVARLPFQPFTQRDDVM 364
Query: 296 ------RDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALY 334
R I + E Q + E +M + + E+EA+Y
Sbjct: 365 ISNIIARWAAIWKGCDDGEDAQRVWFREAQIMQTSRVKVELEAIY 409
>gi|448339320|ref|ZP_21528348.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
gi|445620549|gb|ELY74045.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
Length = 363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 139/312 (44%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNDEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ Q ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDC--DADFILAVETGGMRDRLVENGFDEQYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ LP+ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRITKRLHDELG-LPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + G+++E ++L HG
Sbjct: 287 ADI-VEYELPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLDLGKKSEQQSLASHGL 345
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 346 DFVTETYLPERL 357
>gi|288561120|ref|YP_003424606.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
gi|288543830|gb|ADC47714.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
Length = 362
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 13/302 (4%)
Query: 45 DVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE 104
D + L + RSL + ++ V C ++ ++K T RE++Y E
Sbjct: 57 DKRYYILGDRYGRRSLGNVKQIRKLGQMVYVANFCKDLVQRDKTATIREMYYISEGWGIE 116
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSSG 163
F +Q + N +D+ L +R LG++ G V G + L + + E I+ + G SG
Sbjct: 117 -FNTQQESNIVGEDLEVALGATREDLGLMPEEDGASVYGDITLLDGDYE-INAARAGKSG 174
Query: 164 YSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRF 223
Y+IS + +E LD D +++ VE +F RL ++ + +++ KG ATR
Sbjct: 175 YTISPTIDQVELLDCGAD--FLLAVETMGMFHRLVQEKAHERYNCLIVGLKGQAARATRR 232
Query: 224 LLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV 282
+ R+N LP+ D +P G I GS + + A + K++G+ D+
Sbjct: 233 FIKRVNEELG-LPVYICNDGDPWGFHIAQVIISGSAKLAHVNHDLATPDAKFIGVTASDI 291
Query: 283 QL--IPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYD 339
Q +P PLK D+ + L Q ++ + E+ M+ G++AE ++ +G +
Sbjct: 292 QNYDLPTD---PLKDIDVLRLKELSKDPRYQTDFWQTEIKKMLKLGKKAEQQSFSKYGLE 348
Query: 340 YL 341
Y+
Sbjct: 349 YV 350
>gi|284165559|ref|YP_003403838.1| DNA topoisomerase [Haloterrigena turkmenica DSM 5511]
gi|284015214|gb|ADB61165.1| DNA topoisomerase (ATP-hydrolyzing) [Haloterrigena turkmenica DSM
5511]
Length = 364
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 52 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNDEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 111 FNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQEDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 171 EGGYQIPNNPDTIDFLDC--DADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y K++G++
Sbjct: 229 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q +Y +E++ L + +++E ++L HG
Sbjct: 288 ADI-VEYELPTDPLSDSDINALESELEDPRFQTDYWEEQIELQLDIEKKSEQQSLASHGL 346
Query: 339 DYL 341
D++
Sbjct: 347 DFV 349
>gi|329766434|ref|ZP_08257978.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795494|ref|ZP_10378858.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137033|gb|EGG41325.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 368
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L +S RS S+ ++F ++ + ++ ++K T R+++Y E F Q
Sbjct: 64 LGNSAAVRSSRNSSQLRSFTQLMWLAFFANRLTQEKKSSTLRDVYYSSQAFEIE-FEDQS 122
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+L R I R + G L ++ P E + GY+I
Sbjct: 123 ESDNIIVDLEAVLSKPREDFHIFPEERSSIFGDLNIEYTIPGYEGKKMNLSNHPDGYAIG 182
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E +D T A +I +EK +F R E+ V + SI+I G +TR LL R
Sbjct: 183 PSLTTAELMD--TSAEIVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKR 240
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 241 LHDEM-GLPVIVLTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKF-K 298
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L + QE +K+EL + + ++AE+EA +G + KY+
Sbjct: 299 LPTIPMTESDIKRCYDLQNDPRYQEGIWKKELDVFLKIKRKAELEAFSKYGLTNITDKYL 358
Query: 346 AKKI 349
+K+
Sbjct: 359 PQKL 362
>gi|315230262|ref|YP_004070698.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
gi|315183290|gb|ADT83475.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
Length = 381
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + + R A+ F++ + +++S+ K + RE +Y P
Sbjct: 60 IRMGNKLSRRYFLNVAHARKFMQTLLIAAYVKRLVSEGKHASLREAYYANKHTIPGTKEN 119
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ +L R + + A RG V G + +++ E + S G G+
Sbjct: 120 TFEDQSESDPVIEDLERMLGVLREEMHLTADRRGYVYGDITIRDGEDE-FNTSKLGMGGW 178
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + ++ +D+ D Y +VVE A+ RL E+ + +++I +G R L
Sbjct: 179 AVPGTVEHIQFVDINVD--YALVVETAAMADRLIEEKFPKKERALIIATQGQASRGVRRL 236
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 237 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIK 295
>gi|156103149|ref|XP_001617267.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148806141|gb|EDL47540.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 312
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 71 RVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSL 130
R++ ++E + L T R++FY +P+ F SQ N TI + ++ R L
Sbjct: 42 RLFCIIEIVSKNLKDNMHSTLRQIFYT----NPQLFISQKVSNVTIGKLTKIVKIPRELL 97
Query: 131 GIVASSRGLVAGRLMLQEPNQEV-IDCSACGSSGYSISGDLSL---LEKLDLKTDARYII 186
I S +G++ G + L+E N +DC S + G L + + + D +Y++
Sbjct: 98 NIYNSPKGIIRGNVFLREKNSSPWVDCM----SIFETRGHLICPFGVSDIKISPDVKYVL 153
Query: 187 VVEKHAIFQRLTE-DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
+VEK IF RL + DF+ N P I+ITA+G+PD+ TR LL+ + R L I L
Sbjct: 154 IVEKETIFFRLLQSDFISNYGPCIMITARGFPDLNTRQLLYEIRRCNAGLKIFCLT 209
>gi|291333323|gb|ADD93030.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S04-C246]
Length = 368
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 13/305 (4%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
TR T ++A+ +R + E +++ K T RE++Y F +Q + N
Sbjct: 61 STRDATALSSARVLLRSLHITEFIEEMIDSGKSSTLREMYYISEGWGNGKFGTQNESNNL 120
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEV----IDC-SACGSSGYSISGD 169
+D+ + C R + G + G + +E N++ I+C G SGY + +
Sbjct: 121 AEDLEIVTKCIREDFKLRPEEDGARIIGNVTFEEKNRKGEWMRINCRDDVGDSGYGVPYN 180
Query: 170 LSLLEKLDL-KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
+ EKL L + D +++ VE +F RL E+ + +I KG P +TR ++ R+
Sbjct: 181 VE-SEKLRLVEHDIDFVMAVETGGMFDRLVENGFDEEARCAIIHLKGQPARSTRRIMKRM 239
Query: 229 NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVK-WLGLRGDDVQLIPE 287
+ + PIL D +P I + +G+I + A N +LG+ DD+ L +
Sbjct: 240 SDEWKK-PILVFADCDPWSFRIFASIAYGAIKTAHISEYLATNEAIYLGITADDI-LAYD 297
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHGYDYL-GKYI 345
L DL S +S +KE+++LM G++AE ++L +G D++ Y+
Sbjct: 298 LPSDDLTKSDLGALESELSDPRFATGWWKEQINLMQEIGKKAEQQSLAKYGLDFVTDTYL 357
Query: 346 AKKIV 350
+K+
Sbjct: 358 PEKLA 362
>gi|325960094|ref|YP_004291560.1| type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
gi|325331526|gb|ADZ10588.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
Length = 358
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 12/310 (3%)
Query: 45 DVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE 104
D + L + RSL K ++ + C ++ K T RE++Y + + +
Sbjct: 53 DRRYYVLGDRYGQRSLGNVKQIKKIGQMVYMANFCKGLVQTGKTATLREMYY--VSEGWD 110
Query: 105 Y-FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSS 162
F Q + N +D+ L +R LG++ G V G + L++ + E I+ G S
Sbjct: 111 IDFGDQQESNIVGEDLEVTLGITREDLGLMPEEDGASVYGDITLKDDDVE-INAMRMGKS 169
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
GY+IS + +E LD + +I VE +F R+ ++ + + ++++ KG ATR
Sbjct: 170 GYTISPTIDEVELLD--HNVERVIAVETMGMFHRMVQENAYKKFNTLIVGLKGQAARATR 227
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD 281
L R+N LP+ D +P G I GS + + A N K+LG+ D
Sbjct: 228 RFLKRVNEELG-LPVYICNDGDPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTASD 286
Query: 282 VQLIPEQSLLPLKPRD-LQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDY 340
+ + + PLK D L++ E +K E+ M+ G++AE ++ +G +Y
Sbjct: 287 I-VNYDLPTDPLKDIDVLRLKELYKDPRYRDEFWKVEIKKMLKIGKKAEQQSFSKYGLEY 345
Query: 341 -LGKYIAKKI 349
+ YI +K+
Sbjct: 346 VVDTYIPEKL 355
>gi|254166844|ref|ZP_04873698.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289596418|ref|YP_003483114.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
gi|197624454|gb|EDY37015.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289534205|gb|ADD08552.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
Length = 362
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 18/316 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W + S TRS K + A +R VME +++ +K T RE++Y F
Sbjct: 48 WKY-GDSKITRSAKKLDGAYMLLRTLYVMEFIKEMIRDKKSSTLREMYYISEGWGLAKFH 106
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE----VIDC-SACGS 161
+Q + N+ +D+ + R + G V G + ++E N++ I+C G
Sbjct: 107 TQDESNKLAEDLEVITGYLREDFKLRPEEDGASVIGNITVEEINRKGKPMRINCRDDVGD 166
Query: 162 SGYSISGDLSLLEKLDLK---TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
SGY I ++ EK LK DA ++I +E +F RL E+ + +IL+ KG P
Sbjct: 167 SGYLIPYNV---EKEKLKFVDVDADFVIGIETGGMFDRLVENGFDEKARAILVHIKGQPA 223
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
+TR LL R+N LP++ D +P I + +G+I + Y +++G+
Sbjct: 224 RSTRRLLKRMNEEL-GLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGI 282
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
D+ L + L RD+ +S + Q + EE+ LM+ ++AE ++L +
Sbjct: 283 TASDI-LNYDLPTDKLNDRDIAALQSELKDPRFQTPFWTEEIKLMLKIKKKAEQQSLAKY 341
Query: 337 GYDYL-GKYIAKKIVQ 351
G DY+ Y+ +K+ +
Sbjct: 342 GLDYVTDTYLPEKLTE 357
>gi|350640202|gb|EHA28555.1| Hypothetical protein ASPNIDRAFT_189316 [Aspergillus niger ATCC
1015]
Length = 326
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
+++GLV G + + V+D ++ + + K+DLK D +++V+EK A++
Sbjct: 90 TAKGLVVGYYQMTTTSAGVVDARLSNQD--TLVPRMQDIHKVDLK-DVAWVLVLEKEAVY 146
Query: 195 QRLTEDFVFNQIPS---ILITAKGYPDIATRFLLHRL---NRAFPDLP-ILALVDWNPAG 247
+RL + + +L+T KGYPD++TR + +L + P A VD +P G
Sbjct: 147 RRLASSNYHIRSAAGKGVLVTGKGYPDLSTRAFVRKLFDHSHQLTKRPQFYAFVDGDPDG 206
Query: 248 LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL----IPEQSLLPLKPRDLQIAR 302
+AI+ T+K+GS+ E + WLGLR DV + + +LL L RD + A
Sbjct: 207 MAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLADVVAGAGPLGDDTLLRLTKRDRKKAI 266
Query: 303 SLMSSEILQE------NYKEELSLMVHNGQRAEVEALY 334
+++S + E ++ EL M+ +AE+E LY
Sbjct: 267 AMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEILY 304
>gi|84490128|ref|YP_448360.1| DNA topoisomerase VI subunit A [Methanosphaera stadtmanae DSM 3091]
gi|84373447|gb|ABC57717.1| type II DNA topoisomerase VI, subunit A [Methanosphaera stadtmanae
DSM 3091]
Length = 357
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 25/344 (7%)
Query: 14 KILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVW 73
KIL P+ L + +R + N +Q D + L TRSL K ++
Sbjct: 22 KILQEEVPS---LKIPSRGTGNIIYNQ----DKRYFELGERKGTRSLGNVKQIKKMAQMM 74
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEY-FTSQLQVNRTIQDVIALLHCSRFSLGI 132
V C ++++ +K T RE++Y + + + F +Q + N +D+ L SR +LG+
Sbjct: 75 CVGNFCKELVNIQKTATMREMYY--VSEGWDVGFDNQQESNNITEDIEVTLGVSRENLGL 132
Query: 133 VASSRGL-VAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
+ G V G + L++ + E + G SGY+I + +E +D ++ II VE
Sbjct: 133 LPEEDGASVYGDITLRDDDVE-FNAKKLGKSGYTIPPTIDDVEFVD--SNVERIIAVETM 189
Query: 192 AIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
++ R+ ++ +++ ++++ KG ATR + R + +P+ D +P G I
Sbjct: 190 GMYHRMVQEKAYDRFNTLIVGLKGQAARATRRFIRRASDEL-QVPVYICNDGDPWGFHIA 248
Query: 252 CTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPL-KPRDLQIAR--SLMSS 307
GS + + A + K+LG+ D+ E LP K +D+ +AR L +
Sbjct: 249 MVIISGSAKLAHVNHDLATPDAKFLGVTASDI----ENYDLPTDKLKDIDVARLKELAAD 304
Query: 308 EILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKI 349
+ ++ + E+ M+ G++AE ++ +G +Y+ Y KI
Sbjct: 305 PRYKADFWQTEIKKMIKLGRKAEQQSFSKYGLEYIVDNYFPNKI 348
>gi|254167482|ref|ZP_04874334.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|197623745|gb|EDY36308.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
Length = 362
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 18/316 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W + S TRS K + A +R VME +++ +K T RE++Y F
Sbjct: 48 WKY-GDSKITRSAKKLDGAYMLLRTLYVMEFIKEMIRDKKSSTLREMYYISEGWGLAKFH 106
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE----VIDC-SACGS 161
+Q + N+ +D+ + R + G V G + ++E N++ I+C G
Sbjct: 107 TQDESNKLAEDLEVITGYLREDFKLRPEEDGASVIGNITVEEINRKGKPMRINCRDDVGD 166
Query: 162 SGYSISGDLSLLEKLDLK---TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
SGY I ++ EK LK DA ++I +E +F RL E+ + +IL+ KG P
Sbjct: 167 SGYLIPYNV---EKEKLKFVDVDADFVIGIETGGMFDRLVENGFDEKARAILVHIKGQPA 223
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
+TR LL R+N LP++ D +P I + +G+I + Y +++G+
Sbjct: 224 RSTRRLLKRMNEEL-GLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGI 282
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
D+ L + L RD+ +S + Q + EE+ LM+ ++AE ++L +
Sbjct: 283 TASDI-LNYDLPTDKLNDRDIAALQSELRDPRFQTPFWTEEIKLMLKIKKKAEQQSLAKY 341
Query: 337 GYDYL-GKYIAKKIVQ 351
G DY+ Y+ +K+ +
Sbjct: 342 GLDYVTDTYLPEKLTE 357
>gi|448357876|ref|ZP_21546571.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
gi|445648184|gb|ELZ01146.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
Length = 362
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ +E L +++ T REL+Y D+ E
Sbjct: 50 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNKEAQ 108
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 109 FNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQEDVG 168
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L TDA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 169 EGGYQIPNNPDTIEFL--GTDADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 226
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y K++G++
Sbjct: 227 TRRITKRLHNEL-DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKYIGIQP 285
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q Y +E++ L + +++E ++L HG
Sbjct: 286 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTEYWEEQIELQLEIEKKSEQQSLASHGL 344
Query: 339 DYL 341
D++
Sbjct: 345 DFV 347
>gi|448562314|ref|ZP_21635353.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|448585464|ref|ZP_21647857.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
gi|445719518|gb|ELZ71198.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|445726164|gb|ELZ77781.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
Length = 366
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 145/312 (46%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ + TRS A+ ++ +E + L +++ T REL+Y D+ E +
Sbjct: 54 WVYGDRT-STRSANSVRGARKLLKAAYTIEFLARQLEEDRSSTLRELYYISESWDAEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + +R + G + G L L+E + I C G
Sbjct: 113 FSDQDESNQLIEDLEIVSEVTREDFHMRPEESGATLMGPLELREQTRRGERDIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD D +++ VE + RL E+ ++ +++ KG P A
Sbjct: 173 EGGYQIPNNPDTIEFLDHDID--FVLCVETGGMRDRLVENGFDDEYNVLIVHLKGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + A +++G++
Sbjct: 231 TRRITKRLHNEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEHLATPEARFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMSDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL-GKYIAKKI 349
D++ +Y+ ++
Sbjct: 349 DFVTDEYLPTRL 360
>gi|448410255|ref|ZP_21575120.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
gi|445671951|gb|ELZ24530.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
Length = 363
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 142/305 (46%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ TR+ + A+ ++ ++ + L Q++ T REL+Y L +S +
Sbjct: 51 WVYGDRE-STRTAKTISGAEKLLKATYTIDFLARQLDQDRSSTLRELYY--LSESWDVDE 107
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F+SQ + N I+D+ + R + G V G L+L+E ++E+
Sbjct: 108 AQFSSQDESNNLIEDLEIVSEVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 167
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E LD DA +++ VE + RL E+ ++ ++++ G P
Sbjct: 168 VGQGGYQIPNNPDTIEFLD--NDAEFVLCVETGGMRDRLVENGFDDEHDALVVHLGGQPA 225
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 226 RATRRLTKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGV 284
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+ +D+ + + PL D+ S + Q +Y +E++ L + +++E ++L +
Sbjct: 285 QPEDI-VEYDLPTDPLSDSDVNALESELEDPRFQTDYWEEQIELQLEIDKKSEQQSLASY 343
Query: 337 GYDYL 341
G D++
Sbjct: 344 GLDFV 348
>gi|257051217|ref|YP_003129050.1| DNA topoisomerase VI subunit A [Halorhabdus utahensis DSM 12940]
gi|256689980|gb|ACV10317.1| DNA topoisomerase (ATP-hydrolyzing) [Halorhabdus utahensis DSM
12940]
Length = 370
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ TRS A+ ++V ++ L +++ T REL+Y L +S +
Sbjct: 58 WVYGDRK-STRSSNSVRGAQKLLKVIYSIDFLANQLEEDRSSTLRELYY--LSESWDLDE 114
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F SQ + N+ I+D+ + R + G V G L L+E ++E+
Sbjct: 115 AQFNSQDESNQIIEDLEIVSDVRREEFHMRPEESGAKVMGPLRLREQTNRGDREIHCQDD 174
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I D +E LD DA +++ VE + RL E+ ++ ++++ G P
Sbjct: 175 VGQGGYQIPNDPDTIEFLD--NDADFVLCVETGGMRDRLVENGFDDEYNALVVHLGGQPA 232
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 233 RATRRLTKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFIGV 291
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+ +D+ + + PL D+ S + Q +Y +E++ L + +++E +AL +
Sbjct: 292 QPEDI-VEYDLPTDPLADSDINALESELEDPRFQTDYWEEQIELQLDIDKKSEQQALASY 350
Query: 337 GYDYL 341
G D++
Sbjct: 351 GLDFV 355
>gi|405124141|gb|AFR98903.1| endodeoxyribonuclease [Cryptococcus neoformans var. grubii H99]
Length = 511
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 17/131 (12%)
Query: 213 AKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN- 271
KG+PD+ATR +L + AFP + + ALVD +P GL IL T+ +GS +A Y+ +
Sbjct: 343 GKGFPDLATRQILRLIADAFPCVKMYALVDADPHGLKILSTYMYGS-----KANAYSTDY 397
Query: 272 --------VKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLM-SSEILQENYKEELSL 320
V+WLGLR D I L+PL+ D+Q+A S++ ++L ++K ELS
Sbjct: 398 EDLPLRDRVQWLGLRASDWSYLHINYDDLIPLEQSDIQMAMSMLRDHQVLPVDWKRELSH 457
Query: 321 MVHNGQRAEVE 331
M+H ++AE+E
Sbjct: 458 MLHLHRKAEIE 468
>gi|448730192|ref|ZP_21712502.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
gi|445793923|gb|EMA44488.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
Length = 367
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 55 WVYGDRQ-STRSANSVRGARKLLKAIYTIEFLADQLDADRSSTLRELYYLSESWDEEEAQ 113
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N+ I+D+ + +R + G + G L L+E + I C G
Sbjct: 114 FNDQDESNQLIEDLEIVSKVTREDFHMRPEESGATLMGPLHLREQTRRGERDIHCQEDVG 173
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ + +I++ KG P A
Sbjct: 174 EGGYQIPNNPDTIEFLD--HDAEFVLCVETGGMRDRLVENGFDDDYGTIVVHLKGQPARA 231
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y +++G++
Sbjct: 232 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSDYLATPEAQFIGIQP 290
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
+D+ + + PL D+ S ++ Q +Y +E++ L + ++AE ++L G
Sbjct: 291 EDI-VEYDLPTDPLSDSDINALESELTDPRFQTDYWREQIELQLDIEKKAEQQSLAARGL 349
Query: 339 DYL 341
D++
Sbjct: 350 DFV 352
>gi|289580321|ref|YP_003478787.1| DNA topoisomerase [Natrialba magadii ATCC 43099]
gi|448283992|ref|ZP_21475257.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
gi|289529874|gb|ADD04225.1| DNA topoisomerase (ATP-hydrolyzing) [Natrialba magadii ATCC 43099]
gi|445572087|gb|ELY26629.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
Length = 362
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ +E L +++ T REL+Y D+ E
Sbjct: 50 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNKEAQ 108
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 109 FNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQEDVG 168
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L TDA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 169 EGGYQIPNNPDTIEFL--GTDADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 226
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y K++G++
Sbjct: 227 TRRITKRLHDEL-DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKYIGIQP 285
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q Y +E++ L + +++E ++L HG
Sbjct: 286 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTEYWEEQIELQLEIEKKSEQQSLASHGL 344
Query: 339 DYL 341
D++
Sbjct: 345 DFV 347
>gi|432328235|ref|YP_007246379.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
gi|432134944|gb|AGB04213.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
Length = 362
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
TRS K + A +R VME +++ +K T RE++Y F SQ + N+
Sbjct: 55 ITRSAKKLDGAYMLLRTLYVMEFIKEMIRDKKSSTLREMYYISEGWGLAKFHSQDESNKL 114
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE----VIDC-SACGSSGYSISGD 169
+D+ + R + G + G + ++E N++ I+C G SGY I +
Sbjct: 115 AEDLEVITGFMREDFKLRPEEDGASIIGNITIEEINRKGKPMRINCRDDVGDSGYLIPYN 174
Query: 170 LSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
+ + + DA ++I +E +F RL E+ + +IL+ KG P +TR LL R+N
Sbjct: 175 VENDKLRFVDVDADFVIGIETGGMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMN 234
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQ 288
LP++ D +P I + +G+I + Y +++G+ D+ L +
Sbjct: 235 EEL-GLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDI-LNYDL 292
Query: 289 SLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIA 346
L RD+ S + Q + EE+ LM+ ++AE ++L +G DY+ Y+
Sbjct: 293 PTDKLNDRDIAALESELKDPRFQTPFWTEEIKLMLKIKKKAEQQSLAKYGLDYVTDTYLP 352
Query: 347 KKIVQ 351
+K+ +
Sbjct: 353 EKLTE 357
>gi|333986519|ref|YP_004519126.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
gi|333824663|gb|AEG17325.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
Length = 352
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY-F 106
+ L + RSL K ++ C ++ +K T RE++Y + + + F
Sbjct: 48 YYVLGDRYGKRSLGNVKQIKKVAQMVSTANFCKGLVETQKTATIREMYY--VSEGWDVDF 105
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSSGYS 165
Q + N +D+ L +R LG++ G V G L +++ + EV + G SGYS
Sbjct: 106 GDQQESNLIGEDLEVTLGVTREDLGLMPEEDGAAVYGDLTVKDDDVEV-NALKSGKSGYS 164
Query: 166 ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
IS + +E LD + +I VE +F R+ ++ + + +++ KG ATR L
Sbjct: 165 ISPTIDDVEFLDHGVER--VIAVETMGMFHRMVQEEAYKKFNCLIVGLKGQAARATRRFL 222
Query: 226 HRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL 284
R N LP+ D +P G I GS + + A N K+LG+ D
Sbjct: 223 KRTNEELG-LPVYICNDGDPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTASD--- 278
Query: 285 IPEQSLLPLKPRDLQIAR--SLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDY- 340
I L K +D+ + R L E++ K E+ M+ G++AE ++ +G +Y
Sbjct: 279 IVNYDLPTDKLKDIDVLRLKELYKDPRYHEDFWKLEIKKMLKIGKKAEQQSFSKYGLEYV 338
Query: 341 LGKYIAKKI 349
+ KY+ +K+
Sbjct: 339 VEKYLPEKL 347
>gi|448385303|ref|ZP_21563809.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
gi|445656798|gb|ELZ09630.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
Length = 351
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 39 WVYGDRE-STRSANSVQGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNEEAQ 97
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+SQ + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 98 FSSQDESNNLVEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQEDVG 157
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L +DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 158 EGGYQIPNNPDTIEFL--GSDADFILAVETGGMRDRLVENGFDEEFNALIVHLKGQPARA 215
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y ++G++
Sbjct: 216 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQP 274
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 275 ADIVEYDLPSD---PLSDSDINALESELEDPRFQTDYWEEQIELQLDLGKKSEQQSLAAR 331
Query: 337 GYDYL 341
G D++
Sbjct: 332 GLDFV 336
>gi|302826026|ref|XP_002994564.1| hypothetical protein SELMODRAFT_432476 [Selaginella moellendorffii]
gi|300137414|gb|EFJ04371.1| hypothetical protein SELMODRAFT_432476 [Selaginella moellendorffii]
Length = 111
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKR 88
+ R SN + +GLL + IFLSH T S TKS + K + RVWK++E C+Q+L+ K+
Sbjct: 30 VRRNCSNVLMQRGLLQGDN-IFLSHLDSTLSFTKSGSMKRYFRVWKMLELCYQLLTLGKK 88
Query: 89 VTQRELFYKLLCDSPEYFTSQLQ 111
TQRE+FY+LLCD+ EYF Q Q
Sbjct: 89 ATQREIFYRLLCDASEYFQCQEQ 111
>gi|375084292|ref|ZP_09731298.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
gi|374741052|gb|EHR77484.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
Length = 381
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + + R L A+ F++ + +++++ K + RE +Y P
Sbjct: 60 IKMGNKTSRRYLFHVAHARKFMQTLLIAAYIKRLVAEGKHASLREAYYANKHTIPGTKEN 119
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ + R + I A RG V G +++++ E + S G G+
Sbjct: 120 TFEDQSESDPIIEDLERMFGVLREEMHITADRRGYVYGDIVIKDGEDE-FNASKLGMGGW 178
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + +E ++ D Y++VVE A+ RL E+ + ++++ +G R L
Sbjct: 179 AVPGTVEHIEFPEINVD--YVLVVETAAMADRLIEEKYPKKEKALIVATQGQASRGVRRL 236
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 237 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIK 295
>gi|433590828|ref|YP_007280324.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
gi|433305608|gb|AGB31420.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
Length = 363
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVQGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+SQ + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSSQDESNNLVEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L +DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFL--GSDADFILAVETGGMRDRLVENGFDEEFNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQP 286
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 287 ADIVEYDLPSD---PLSDSDINALESELEDPRFQTDYWEEQIELQLDLGKKSEQQSLAAR 343
Query: 337 GYDYL 341
G D++
Sbjct: 344 GLDFV 348
>gi|402081027|gb|EJT76172.1| meiosis-specific topoisomerase Spo11 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 433
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 42/218 (19%)
Query: 72 VWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG 131
V +++E + L K VT+R +FY+ + F Q V+ + ++ L R +L
Sbjct: 128 VIRILEIAHEALLTGKLVTKRNIFYQ----DKQLFRDQRTVDALVDNIALTLGVGRHALN 183
Query: 132 IVASSRGLVAGRLMLQ-EPNQEVIDCSACGSSGYSISGDLSLLEKLD-LK----TDARYI 185
I A+ +GLVAG + L + + ++ C D +L+ D L+ + A++I
Sbjct: 184 IAAAGKGLVAGPISLTLDDDGSILPCD-----------DATLIPTPDRLRHVEWSRAQWI 232
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNP 245
+V+EK KGYPD+ TR L L+++ P +P+ LVD++P
Sbjct: 233 LVIEKEG---------------------KGYPDLCTRRFLFSLHQSRPYIPVYGLVDYDP 271
Query: 246 AGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQ 283
G+ IL ++ GS + E + WLG+R D++
Sbjct: 272 YGIRILRNYQRGSANLQHERDCTVSTIHWLGIRLADIR 309
>gi|395645300|ref|ZP_10433160.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
gi|395442040|gb|EJG06797.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
Length = 363
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 23/301 (7%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
RS + A +++ V+ Q L++ + T RE++Y F +Q + NR
Sbjct: 60 SVRSAQTAKGASHLLKMAYVIGFLKQQLAENRSSTLREMYYISEGWKGAKFGAQDESNRV 119
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSAC----GSSGYSISGDL 170
++D+ L R + G + G + ++E + + C G +GY I ++
Sbjct: 120 VEDLEILTDIQREIYHLRPEEDGASIFGPIRIREKTRRGVQEIHCQDNVGETGYQIPNNV 179
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
LE LD DA+++I +E ++ RL E+ + + L+ KG P +TR LL R++
Sbjct: 180 DALEFLD--HDAKFVIALETGGMYARLIENGFDEEYGAALVHLKGQPARSTRRLLKRIHE 237
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQ------ 283
F LP++ D +P I + +GSI M +++G++ D++
Sbjct: 238 EF-GLPVVVFTDGDPWSYRIYASVAYGSIKAAHMSELLATPQAQFIGVQPSDIRDYDLPA 296
Query: 284 -LIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLG 342
+ EQ + LK L + ++E+++L + G ++E +A G D++
Sbjct: 297 DHLSEQDVAALKA-------ELTDPRFATDYWREQIALQLQMGLKSEQQAFAARGLDFVT 349
Query: 343 K 343
+
Sbjct: 350 R 350
>gi|424811565|ref|ZP_18236816.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757291|gb|EGQ40872.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalinarum sp.
J07AB56]
Length = 524
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 10/228 (4%)
Query: 45 DVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCD--- 101
D + L S TR + A+ F++ V +++ Q + REL+Y+L
Sbjct: 52 DEGRLKLGDSTSTRKFLNMSQARKFMQTTLVASKAKELIQQGSTASIRELYYQLKHTIEG 111
Query: 102 -SPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACG 160
F Q + N + D+ A R L + A ++G + G L++ + + IDC G
Sbjct: 112 LDENTFEDQDESNPVVVDLEAATGTIREELHMFAETKGNLFGPLVINDAG-DRIDCMNMG 170
Query: 161 SSGYSISGDLSLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDI 219
+SG +I S+++ + + +A Y++VVE A+ RL E+ + +I+I A G P
Sbjct: 171 TSGLAIP---SIVDHYEFEECEADYVLVVETQALVNRLVEEDYHEKEDAIIIGAGGQPSR 227
Query: 220 ATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
TR L++ L+ DLP+ D +P G I K GS+ + ++ R
Sbjct: 228 GTRRLVNILHERL-DLPVYVFTDADPYGYYIYSVLKSGSMSLANQSDR 274
>gi|255949132|ref|XP_002565333.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592350|emb|CAP98697.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 368
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 41/287 (14%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F + +++ Q++ + +++R+++Y PE+F Q V+ + D+ +
Sbjct: 87 AWKFTVILRILAILDQVIRTGQLISKRDIYYI----DPEFFRMQYIVDGIVDDLAYTIGV 142
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
+R +L + A+++GLV G L + +ID C + + L ++ T A
Sbjct: 143 NRTALNVEAAAKGLVTGDFRLIRGSHILIDAHPCPQAVF------HRLARISYHTRA--- 193
Query: 186 IVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL-------NRAFPDLPIL 238
+ E + D + KGYPD TR L + +R P
Sbjct: 194 LAGEGIMVTVSCVSDLAY--------AGKGYPDFMTRTFLRAMSDSASKQSRRPPRF--Y 243
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPE----QSLLPL 293
AL D +P G+AI+ T+K+GS + R + ++WLGLR D+ +PE +LL L
Sbjct: 244 ALTDGDPHGMAIMSTYKYGSAANLHQNARLSIPRLQWLGLRVSDIIAVPEVLGDTALLSL 303
Query: 294 KPRDLQIARSLM------SSEILQENYKEELSLMVHNGQRAEVEALY 334
RD + +++ +S+ + ++ EL M+ +AE+E LY
Sbjct: 304 TMRDRKKIMAMLRNSPVWASDGPEPEWRAELQRMLVLNLKAEIEILY 350
>gi|15790022|ref|NP_279846.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|169235745|ref|YP_001688945.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
gi|13124612|sp|Q9HR32.1|TOP6A_HALSA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|229558493|sp|B0R4D2.1|TOP6A_HALS3 RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|10580448|gb|AAG19326.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|167726811|emb|CAP13597.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
Length = 366
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 153/341 (44%), Gaps = 17/341 (4%)
Query: 22 AISDLPLINRKS-SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF 80
A D+P ++ + S S + DV W++ S TRS A+ ++ ++
Sbjct: 28 ADGDIPRMSLPTRSKSNIEYDEDADV-WVY-GDSQSTRSANSVRGARKLLKSVYTVDFLA 85
Query: 81 QILSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG 138
Q L + + T REL+Y + ++ F Q + ++ ++D+ + R + G
Sbjct: 86 QQLDEGRSSTLRELYYLSESWDEAEAQFNDQSESDKLVEDLEIVSGVKREDFHMRPEESG 145
Query: 139 L-VAGRLMLQEP----NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
V G L L+E ++E+ G GY I + ++ LD TDA +++ VE +
Sbjct: 146 AKVMGPLRLREQTRRGDREIHCQEDVGQGGYQIPNNPDTIDFLD--TDADFVLCVETGGM 203
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
RL E+ + +I++ G P ATR L RL+ DLP+ D +P I +
Sbjct: 204 RDRLVENGFDDDYNAIVVHLGGQPARATRRLTKRLHDEL-DLPVTVFTDGDPWSYRIYGS 262
Query: 254 FKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQE 312
+GSI + Y +++G+R D+ + + PL D+ S + Q
Sbjct: 263 VAYGSIKSAHLSEYLATPQAQFIGIRPQDI-VDYDLPTDPLSDSDVNALESELEDPRFQS 321
Query: 313 NY-KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQ 351
++ E++ L + ++AE +AL G D++ Y+ +++ +
Sbjct: 322 DFWTEQIGLQLDIDKKAEQQALASRGLDFVTDTYLPERLAE 362
>gi|448733641|ref|ZP_21715883.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
gi|445802161|gb|EMA52468.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
Length = 412
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ ++ L +++ T REL+Y + +
Sbjct: 55 WVYGDRQ-STRSANSVRGARKLLKAIYTIDFLADQLDEDRSSTLRELYYLSESWDNEEAQ 113
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSACG 160
F Q + N+ I+D+ + +R + G V G L ++E ++E+ G
Sbjct: 114 FNDQDESNQLIEDLEIVSEVTREDFHMRPEESGAKVMGPLRIREQTNRGDREIHCQDDVG 173
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ +I++ G P A
Sbjct: 174 QGGYQIPNNPDTIEFLD--HDAEFVLCVETGGMRDRLVENGFDEDFNTIVVHLGGQPARA 231
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L RL+ DLP++ D +P I + +GSI + Y +++G++
Sbjct: 232 TRRLTKRLHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSNYLATPEAQFIGIQP 290
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
+D+ + + PL D+ S ++ Q +Y +E++ L + ++AE ++L G
Sbjct: 291 EDI-VEYDLPTDPLADSDVNALESELTDPRFQTDYWREQIELQLDINKKAEQQSLAARGL 349
Query: 339 DYL 341
D++
Sbjct: 350 DFV 352
>gi|335433682|ref|ZP_08558500.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
gi|334898485|gb|EGM36591.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 140/305 (45%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
W++ TRS A+ ++V ++ L +++ T REL+Y L +S +
Sbjct: 58 WVYGDRK-STRSANSVRGAQKLLKVIYSIDFLANQLEEDRSSTLRELYY--LSESWDLDE 114
Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
F SQ + N+ I+D+ + R + G V G L L+E ++E+
Sbjct: 115 AQFNSQDESNQLIEDLEIVSDVRREEFHMRPEESGAKVMGPLRLREQTNRGDREIHCQDD 174
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I D ++ LD DA +++ VE + RL E+ ++ ++++ G P
Sbjct: 175 VGQGGYQIPNDPDTIDFLD--NDADFVLCVETGGMRDRLVENGFDDEYNALVVHLGGQPA 232
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR L RL+ DLP+ D +P I + +GSI + Y +++G+
Sbjct: 233 RATRRLTKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFIGV 291
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+ +D+ + + PL D+ S + Q +Y +E++ L + +++E +AL +
Sbjct: 292 QPEDI-VEYDLPTDPLADSDVNALESELEDPRFQTDYWEEQIELQLDIDKKSEQQALASY 350
Query: 337 GYDYL 341
G D++
Sbjct: 351 GLDFV 355
>gi|448720888|ref|ZP_21703482.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
gi|445780501|gb|EMA31383.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
Length = 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ ++ L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIDFLADQLDEDRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
FTSQ + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FTSQDESNSLIEDLEIVSGVTREDFHMRPEESGATIMGPLYLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIDFLDC--DADFILAVETGGMRDRLVENGFDEEYNALVVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLHDEL-DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D S +S Q +Y +E++ L + +++E ++L G
Sbjct: 287 ADI-VEYELPTDPLSDSDKNALESELSDPRFQTDYWEEQIELQLEIEKKSEQQSLASRGL 345
Query: 339 DYL 341
D++
Sbjct: 346 DFV 348
>gi|448502260|ref|ZP_21612533.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
gi|445694416|gb|ELZ46545.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
Length = 361
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLANQLDDDRSSTLRELYYLSESWNNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+SQ + N ++D+ + +R + G V G L L+E I C G
Sbjct: 108 FSSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLELREQTNRGDREIHCQLDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ + ++++ G P A
Sbjct: 168 QGGYQIPNNPDTIEFLD--NDAEFVLCVETGGMRDRLVENGFDEEHDALVVHLGGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R R DLP++ D +P I + +GSI + Y +++G++
Sbjct: 226 TRRLTKRF-RDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQP 284
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 285 EDIVEYDLPSD---PLSDSDINALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASR 341
Query: 337 GYDYL 341
G D++
Sbjct: 342 GLDFV 346
>gi|448352990|ref|ZP_21541768.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
gi|445641057|gb|ELY94140.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
Length = 362
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ +E L +++ T REL+Y D+ E
Sbjct: 50 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNKEAQ 108
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 109 FNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQEDVG 168
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L TDA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 169 EGGYQIPNNPDTIEFL--GTDADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 226
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP+ D +P I + +GSI + Y +++G++
Sbjct: 227 TRRITKRLHDEL-DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQYIGIQP 285
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q Y +E++ L + +++E ++L HG
Sbjct: 286 ADI-VEYDLPTDPLSDSDINALESELEDPRFQTEYWEEQIELQLEIEKKSEQQSLASHGL 344
Query: 339 DYL 341
D++
Sbjct: 345 DFV 347
>gi|242399083|ref|YP_002994507.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
gi|242265476|gb|ACS90158.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
Length = 381
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 49 IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
I + R L A+ F++ + +++S+ K + RE +Y P
Sbjct: 60 IKMGDKTSRRYLFHVAHARKFMQTLLISAYIKRLVSEGKHASLREAYYANKHTIPGSKEN 119
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
F Q + + I+D+ + R + I A RG + G +++++ E + S G G+
Sbjct: 120 TFEDQSESDPIIEDLERMFGVLREEMHITADRRGYIYGDVVIKDGEDE-FNASKLGMGGW 178
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
++ G + +E ++ D Y++VVE A+ RL E+ + ++++ +G R L
Sbjct: 179 AVPGTVEHIEFPEINVD--YVLVVETAAMADRLIEEKYPKKEKALVVATQGQASRGVRRL 236
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
+HRL+ LPI+ D +P G I T K GSI + + + A K++G+ DD++
Sbjct: 237 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIK 295
>gi|312136519|ref|YP_004003856.1| DNA topoisomerase [Methanothermus fervidus DSM 2088]
gi|311224238|gb|ADP77094.1| DNA topoisomerase (ATP-hydrolyzing) [Methanothermus fervidus DSM
2088]
Length = 353
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY-FTSQ 109
L + RSL + ++ V C +++ + K T RE++Y + + + F Q
Sbjct: 52 LGDKYGVRSLGNVKQLRKIGQMLYVANFCKELIKKGKTATLREMYY--VSEGWDVDFNDQ 109
Query: 110 LQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSSGYSISG 168
+ N +D+ +L +R LG++ G V G+L ++E + E ID G SGY+I
Sbjct: 110 QESNNISEDLEIVLGVTREDLGLLPEEDGASVYGKLTVREGDIE-IDAMKAGKSGYTIPP 168
Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
+ +E +D D +I VE ++ RL ++ + +++ KG ATR L RL
Sbjct: 169 TVDEIEFVD--HDVERVIAVETMGMYHRLVQEKAHKKFDCLIVGLKGQAARATRRFLKRL 226
Query: 229 NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV 282
N LP+ D +P G I GS + + A N K+LG+ D+
Sbjct: 227 NEELK-LPVYICNDGDPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTATDI 280
>gi|448491669|ref|ZP_21608509.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
gi|445692669|gb|ELZ44840.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
Length = 361
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLANQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F SQ + N ++D+ + +R + G V G L+L+E + I C G
Sbjct: 108 FKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLLLREQTNRGEREIHCQLDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ ++++ G P A
Sbjct: 168 QGGYQIPNNPDTIEFLD--NDAEFVLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R R DLP++ D +P I + +GSI + Y +++G++
Sbjct: 226 TRRLTKRF-RDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQP 284
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 285 EDIVEYDLPSD---PLSDSDINALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASR 341
Query: 337 GYDYL 341
G D++
Sbjct: 342 GLDFV 346
>gi|14591345|ref|NP_143423.1| DNA topoisomerase VI subunit A [Pyrococcus horikoshii OT3]
gi|3257992|dbj|BAA30675.1| 301aa long hypothetical typeII DNA topoisomerase subunit A
[Pyrococcus horikoshii OT3]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSP----EYFTSQLQVNRTIQDVIALLHCSRFSL 130
+M +++S+ K + RE +Y P F Q + + I+D+ +L R +
Sbjct: 6 LMAYIKRLVSEGKHASLREAYYANKHTVPGTRENTFEDQSESDPIIEDLERMLGVLREEM 65
Query: 131 GIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEK 190
I A RG + G +++++ E + S G+ G+++ G + ++ ++ D Y++VVE
Sbjct: 66 HITADRRGYIYGDIVIKDGEDE-FNASKLGTGGWAVPGTVEHIQFPEINVD--YVLVVET 122
Query: 191 HAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAI 250
A+ RL E+ + +++ +G R L+HRL+ LPI+ D +P G I
Sbjct: 123 AAMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYE-EGLPIIVFTDGDPYGWYI 181
Query: 251 LCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
T K GSI + + + A + K++G+ DD++
Sbjct: 182 YSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIK 215
>gi|196008211|ref|XP_002113971.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
gi|190582990|gb|EDV23061.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
Length = 161
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS-ILITAKGYP 217
CGS I + + +++ A+++++VEK AIFQRL + + +++ S I+IT KGYP
Sbjct: 16 CGSFENKIQSIPLVADIAGIESTAKFVLIVEKEAIFQRLLDGNIKDKLNSCIVITGKGYP 75
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACN-VKWLG 276
D++TR ++ L A LP L D +P GL I C +K+GS M EA +KWLG
Sbjct: 76 DMSTRLMIRFLWDAL-KLPTFVLTDADPYGLEIFCVYKYGSKEMSFEAENLCFPLIKWLG 134
Query: 277 L 277
+
Sbjct: 135 V 135
>gi|397772615|ref|YP_006540161.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|448340243|ref|ZP_21529216.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
gi|397681708|gb|AFO56085.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|445630549|gb|ELY83810.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
Length = 363
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEADRSSTLRELYYLSESWDNDEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDC--DADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ LP+ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRITKRLHDELG-LPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q Y +E++ L + G+++E ++L HG
Sbjct: 287 ADI-VEYELPTDPLSDSDINALESELEDPRFQTEYWEEQIELQLDLGKKSEQQSLASHGL 345
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 346 DFVTETYLPERL 357
>gi|386000804|ref|YP_005919103.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
gi|357208860|gb|AET63480.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
Length = 360
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 14/313 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF-QILSQEKRVTQRELFYKLLCDSPEYF 106
W++ RS+ AK+ ++ ++E + L Q + T RE++Y F
Sbjct: 49 WVYGDQE-SVRSVKTVRGAKSLLKTTYLIELLINEHLRQNRGSTLREIYYISENWDVAKF 107
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CGS 161
Q + +R ++D+ L R + G V G L + E + I C G
Sbjct: 108 GEQAESDRLVEDLEILTALLREDFHVRPEEDGATVFGPLTISEKTRRGERTIHCQEDVGE 167
Query: 162 SGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIAT 221
+GY I ++ +E + DA+++I +E + RL E+ + +IL+ KG P +T
Sbjct: 168 AGYQIPFNVDNVEFKE--HDAKFVIAIETGGMHARLIENGFDQEHDAILVHLKGQPARST 225
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGD 280
R L+ RLN LP++ D +P I + +G+I + Y +++G++
Sbjct: 226 RRLIKRLNEELS-LPVVIFTDGDPWSYRIYASVAYGAIKSAYLSDYLVTPAAQFVGVQPT 284
Query: 281 DVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYD 339
D+ + + S L +DLQ RS ++ +Y KE++ L + ++AE +A G D
Sbjct: 285 DI-VNYDLSTDKLTDQDLQALRSELADPRFATDYWKEQIQLQIKLSKKAEQQAFAGKGLD 343
Query: 340 YLGK-YIAKKIVQ 351
++ K Y+ +++ +
Sbjct: 344 FVTKTYLPERLSE 356
>gi|225557184|gb|EEH05471.1| meiotic recombination protein spo11 [Ajellomyces capsulatus G186AR]
Length = 377
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 25/145 (17%)
Query: 213 AKGYPDIATRFLLHRLNRAFPDL---------PILALVDWNPAGLAILCTFKFGSIGMGM 263
KGYPDI+TR LH L+R P PI LVD +P G+AI+ T+K+GS
Sbjct: 217 GKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIFMLVDGDPDGMAIMSTYKYGSRAQAH 276
Query: 264 EAYRYAC-NVKWLGLRGDDVQLIP-------EQSLLPLKPRDLQIARSLMS-SEILQEN- 313
+ A NV+WLGL+ +L+P + +L+PL RD + A+ ++ S + E+
Sbjct: 277 DNTNLAVHNVQWLGLQAS--ELVPSSLEIQGDDALIPLTSRDRKKAQDMLGRSPVFAEDG 334
Query: 314 ----YKEELSLMVHNGQRAEVEALY 334
++ EL M+ +AE+E LY
Sbjct: 335 PEPTWRRELQHMLMTNVKAEIEMLY 359
>gi|145967218|gb|ABP99001.1| meiotic transesterase [Cryptosporidium parvum]
Length = 360
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 25/186 (13%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQ-- 147
T R+++Y ++P +T Q ++ I V L+ R L +V+++RG + G L++Q
Sbjct: 76 TLRDIYY----NNPSLYTKQSISDKYIAQVTHLVQTPRELLNVVSTARGRIRGPLIIQGY 131
Query: 148 -----EPNQEV-IDC-SACGSSGYSIS-----GDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
E +EV +DC S S G+SIS G L K + ++++VVEK IFQ
Sbjct: 132 EIGFCERRREVRLDCMSIFESMGHSISPYLFKGMNGL--KFSYYSKIKFVLVVEKDTIFQ 189
Query: 196 RLTEDFVFNQ---IPSILITAKGYPDIATRFLLHRLNRAFP-DLPILALVDWNPAGLAIL 251
RL E F F++ ILITA+G+ D+ TR LL+RL++ P D L D++ GL+I
Sbjct: 190 RLLE-FGFHKEFDNSCILITARGFSDLPTRTLLYRLSQDLPEDTKFWILCDYDCFGLSIA 248
Query: 252 CTFKFG 257
T+ G
Sbjct: 249 ATYIMG 254
>gi|66359728|ref|XP_627042.1| topoisomerase VIA/SpoII nuclease subunit, toprim domain
[Cryptosporidium parvum Iowa II]
gi|46228480|gb|EAK89350.1| topoisomerase VIA/SpoII nuclease subunit, toprim domain
[Cryptosporidium parvum Iowa II]
Length = 360
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 25/186 (13%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQ-- 147
T R+++Y ++P +T Q ++ I V L+ R L +V+++RG + G L++Q
Sbjct: 76 TLRDIYY----NNPSLYTKQSISDKYIAQVTHLVQTPRELLNVVSTARGRIRGPLIIQGY 131
Query: 148 -----EPNQEV-IDC-SACGSSGYSIS-----GDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
E +EV +DC S S G+SIS G L K + ++++VVEK IFQ
Sbjct: 132 EIGFCERRREVRLDCMSIFESMGHSISPYLFKGMNGL--KFSYYSKIKFVLVVEKDTIFQ 189
Query: 196 RLTEDFVFNQ---IPSILITAKGYPDIATRFLLHRLNRAFP-DLPILALVDWNPAGLAIL 251
RL E F F++ ILITA+G+ D+ TR LL+RL++ P D L D++ GL+I
Sbjct: 190 RLLE-FGFHKEFDNSCILITARGFSDLPTRTLLYRLSQDLPEDTKFWILCDYDCFGLSIA 248
Query: 252 CTFKFG 257
T+ G
Sbjct: 249 ATYIMG 254
>gi|448346429|ref|ZP_21535314.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
gi|445632632|gb|ELY85843.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
Length = 363
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTLRELYYLSESWDNDEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N ++D+ + +R + G + G L L+E + I C G
Sbjct: 110 FNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATLMGPLHLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDC--DADFILAVETGGMRDRLVENGFDEEYDALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ LP+ D +P I + +GSI + Y ++G++
Sbjct: 228 TRRITKRLHDELG-LPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKE-ELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q Y E ++ L + G+++E ++L HG
Sbjct: 287 ADI-VEYELPTDPLSDSDINALESELEDPRFQTEYWEKQIELQLDLGKKSEQQSLASHGL 345
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 346 DFVTETYLPERL 357
>gi|67598934|ref|XP_666249.1| SPO11 protein [Cryptosporidium hominis TU502]
gi|54657208|gb|EAL36020.1| SPO11 protein [Cryptosporidium hominis]
Length = 360
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 25/186 (13%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQ-- 147
T R+++Y ++P +T Q ++ I V L+ R L +V+++RG + G L++Q
Sbjct: 76 TLRDIYY----NNPSLYTKQSISDKYIAQVTHLVQTPRELLNVVSTARGRIRGPLIIQGY 131
Query: 148 -----EPNQEV-IDC-SACGSSGYSIS-----GDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
E +EV +DC S S G+SIS G L K + ++++VVEK IFQ
Sbjct: 132 EIGFCERRREVRLDCMSIFESMGHSISPYLFKGMNGL--KFSYYSKIKFVLVVEKDTIFQ 189
Query: 196 RLTEDFVFNQ---IPSILITAKGYPDIATRFLLHRLNRAFP-DLPILALVDWNPAGLAIL 251
RL E F F++ ILITA+G+ D+ TR LL+RL++ P D L D++ GL+I
Sbjct: 190 RLLE-FGFHKEFDNSCILITARGFSDLPTRTLLYRLSQDLPEDTKFWILCDYDCFGLSIA 248
Query: 252 CTFKFG 257
T+ G
Sbjct: 249 ATYIMG 254
>gi|440491840|gb|ELQ74447.1| Catalytic subunit of the meiotic double strand break transesterase
[Trachipleistophora hominis]
Length = 292
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 37/288 (12%)
Query: 70 VRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF- 128
V+ K E +L + T+RE+FY SP F Q VN+ I D A +H R
Sbjct: 25 VKELKFYEIIHGMLVDNVKKTKREIFYA----SPNIFKRQETVNKMI-DKFAHVHKVRLI 79
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL--SLLEKLDLKTDARYII 186
+ AS +GL G + E N+ Y++ +L + E D+ ++
Sbjct: 80 DFNVSASLKGLFYGEVTFIESNK-----------AYTLYQNLIPDMNEVTDITCRFSSVL 128
Query: 187 VVEKHAIFQRLTEDFVFNQIP--SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
VVEK + + E F+ N P +L+T KGYPD T L RL I L D +
Sbjct: 129 VVEKDCMMTFIKEVFLRNNRPIDFLLVTGKGYPDYNTLAFLRRLEHM--KCQIYGLFDLD 186
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV--QLIPEQSLLPLKPRDLQIAR 302
P GL+I +K M +G+ DV I + L+ L RD ++
Sbjct: 187 PFGLSIFKNYKSKINSMV-----------RIGITSKDVFEYKIMKNELITLTQRDYKLLT 235
Query: 303 SLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIV 350
SL + ++ + E++S + GQ+ E+E + ++ +Y+ KK++
Sbjct: 236 SL-KNNVIDSEFSEDISFLEGLGQKMEIEIFTSYQTIFIVQYLEKKLM 282
>gi|145508327|ref|XP_001440113.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834166|emb|CAI44467.1| Spo11-like type II topoisomerase [Paramecium tetraurelia]
gi|124407319|emb|CAK72716.1| unnamed protein product [Paramecium tetraurelia]
Length = 330
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 124/257 (48%), Gaps = 29/257 (11%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
T+RE+FY + F Q +N I+ + R L I+++S+GLV G L+L++
Sbjct: 76 TKREIFYM----NQNVFQKQENLNLVIKQFSHNIQIQRKQLHIISASKGLVCGSLILRKQ 131
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDL---KTDARYIIVVEKHAIF----QRLTEDFV 202
+ E +D S G L++ E +D + ++I+VVEK ++ + ++F+
Sbjct: 132 DIE-LDLLQLTSQG----KGLNITEFMDEWLPEIYGKWILVVEKETVYFHLINEMHQEFL 186
Query: 203 FNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG 262
N ++LIT KGYP AT+ + L+ P +P+ D +P G IL + FG+
Sbjct: 187 QN---TVLITGKGYPCYATKSFVKYLSIMNPYIPVYYFGDMDPHGYDILQQYAFGNAYTS 243
Query: 263 MEAYRYACNVKWLG--LRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSL 320
E ++WL D +Q+ + L R+LQ+ + S+ L E +K+
Sbjct: 244 HELNNIPW-IQWLNSYFPLDQLQIKKKNK---LNQRELQLLEQIKSNANLPEEWKQ---- 295
Query: 321 MVHNGQRAEVEALYFHG 337
++ N ++ E+E + F
Sbjct: 296 IMDNKEKYEIEDMQFQN 312
>gi|148643016|ref|YP_001273529.1| DNA topoisomerase VI subunit A [Methanobrevibacter smithii ATCC
35061]
gi|222445253|ref|ZP_03607768.1| hypothetical protein METSMIALI_00881 [Methanobrevibacter smithii
DSM 2375]
gi|261350188|ref|ZP_05975605.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
gi|148552033|gb|ABQ87161.1| type II DNA topoisomerase VI, subunit A [Methanobrevibacter smithii
ATCC 35061]
gi|222434818|gb|EEE41983.1| type IIB DNA topoisomerase [Methanobrevibacter smithii DSM 2375]
gi|288860974|gb|EFC93272.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
Length = 366
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 145/313 (46%), Gaps = 15/313 (4%)
Query: 36 SRVSQGLLTDVS--WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRE 93
SR + ++ D + + L + RSL + ++ V C ++ +EK T RE
Sbjct: 49 SRGTSNIVYDEAKRYYVLGDRYGRRSLGNVKQIRKLGQMVYVANFCKDLVQREKTATIRE 108
Query: 94 LFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE 152
++Y + F +Q + N +D+ L +R LG++ G V G L L++ + E
Sbjct: 109 MYY-VSEGWGISFKTQQESNIVGEDLEVTLGTTREDLGLMPEEDGASVYGDLTLKDGDVE 167
Query: 153 VIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILIT 212
I+ G SGY+IS + ++ LD D +I VE +F R+ ++ +++ ++++
Sbjct: 168 -INALKAGKSGYTISPTIDQVDFLDCNVDR--VIAVETMGMFHRMVQEKAYDRFNTLIVG 224
Query: 213 AKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-N 271
KG ATR + R+N LP+ D +P G I GS + + A +
Sbjct: 225 LKGQAARATRRFIKRVNEEL-HLPVYICNDGDPWGFHIAQVIISGSAKLAHVNHDLATPD 283
Query: 272 VKWLGLRGDDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRA 328
K++G+ D+ +P + LK D+ + L + ++ + E+ M+ G++A
Sbjct: 284 AKFMGVTASDIINYDLPTDN---LKDVDVMRLKELAKDPRYKSDFWQTEIKKMLKIGKKA 340
Query: 329 EVEALYFHGYDYL 341
E ++ +G +Y+
Sbjct: 341 EQQSFSKYGLEYV 353
>gi|448438357|ref|ZP_21587849.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
gi|445679178|gb|ELZ31651.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
Length = 361
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 21/333 (6%)
Query: 20 DPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETC 79
D I ++ L R SN + W + + TRS A+ ++ +E
Sbjct: 24 DGKIPEMTLPTRTKSNIEYDEASGV---WTYGDRT-STRSANSVRGARKLLKAAYTIEFL 79
Query: 80 FQILSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSR 137
L ++ T REL+Y + + F SQ + N ++D+ + +R +
Sbjct: 80 ADQLDDDRSSTLRELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEES 139
Query: 138 GL-VAGRLMLQEP---NQEVIDCS-ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
G V G L ++E I C G GY I + +E LD DA +++ VE
Sbjct: 140 GAKVMGPLEIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLD--NDAEFVLCVETGG 197
Query: 193 IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+ RL E+ + ++++ G P ATR L R R DLP++ D +P I
Sbjct: 198 MRDRLVENGFDEEHDALVVHLGGQPARATRRLTKRF-RDELDLPVVVFTDGDPWSYRIYG 256
Query: 253 TFKFGSIGMG-MEAYRYACNVKWLGLRGDDV--QLIPEQSLLPLKPRDLQIARSLMSSEI 309
+ +GSI + Y +++G++ +D+ +P PL D+ S +
Sbjct: 257 SVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPSD---PLADSDINALESELEDPR 313
Query: 310 LQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
Q +Y +E++ L + G+++E ++L G D++
Sbjct: 314 FQTDYWEEQIELQLDIGKKSEQQSLASRGLDFV 346
>gi|397779966|ref|YP_006544439.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
gi|396938468|emb|CCJ35723.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
Length = 419
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 23/301 (7%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
TR+ T +A +++ V+ Q L + + T REL+Y F++Q + N
Sbjct: 116 STRAATTEKSAVHLLKMAYVIGFLKQQLVENRSSTLRELYYISEGWRRAKFSAQDESNLL 175
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSAC----GSSGYSISGDL 170
++D+ + R + + G + G L ++E + + C G +GY I ++
Sbjct: 176 VEDLEIITDVQREAFHLRPEEDGASIFGPLRIRETTRRGVREMHCQEDVGEAGYPIPNNV 235
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
L+ +D DA+++I +E ++ RL E+ + +IL+ KG P +TR +L RLN
Sbjct: 236 DTLDFVD--HDAKFVIAIETGGMYARLMENGFDEEYGAILVHLKGQPARSTRRVLRRLND 293
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDV------- 282
+ DLP++ D +P I + +GSI M +++G++ D+
Sbjct: 294 SL-DLPVVVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPTDISDYNLPA 352
Query: 283 QLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLG 342
+ EQ + LK L E ++ +++L + ++E +A G D++
Sbjct: 353 DHLTEQDINALKA-------ELTDPRFATEYWRSQINLQLEMKLKSEQQAFASRGLDFVT 405
Query: 343 K 343
K
Sbjct: 406 K 406
>gi|336476700|ref|YP_004615841.1| DNA topoisomerase [Methanosalsum zhilinae DSM 4017]
gi|335930081|gb|AEH60622.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosalsum zhilinae DSM
4017]
Length = 373
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 28/336 (8%)
Query: 20 DPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETC 79
D I + + +R N +G +DV W++ +AK +++++T
Sbjct: 35 DGTIPKILMPSRTKKNIEYDEG--SDV-WVYGDRE-------SERSAKTVKGAFQLLKTT 84
Query: 80 FQI-------LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGI 132
+ LSQ + T REL+Y F Q + +R I+D+ + R +
Sbjct: 85 HTVDFLLKNHLSQNRGSTLRELYYISENWDVAKFREQPESDRLIEDLEIITGLQREYFHM 144
Query: 133 VASSRGLVA-GRLMLQEPNQE---VIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIV 187
G G + + E + +I C G SGY I ++ + LD DA +II
Sbjct: 145 RPEEDGATMFGPIKIHEETKRGTRIIHCQEDIGESGYQIPFNVENINFLD--HDADFIIA 202
Query: 188 VEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
+E ++ RL E+ + +IL+ KG P +TR L+ R+N +P+ D +P
Sbjct: 203 IETGGMYARLIENGFDEKYNAILVHLKGQPARSTRRLIKRMNDEL-GIPVAVFTDGDPWS 261
Query: 248 LAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMS 306
I + +G+I + + + K++G++ D+ + E S L +D+ RS +S
Sbjct: 262 YRIYASIAYGAIKSAHLSEFMATPSAKFVGVQPSDI-VEYELSTDKLTEKDISALRSELS 320
Query: 307 SEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
+ +Y KE+++L + ++AE +A G D++
Sbjct: 321 DPRFETDYWKEQINLQLEIQKKAEQQAFAGKGLDFV 356
>gi|429965041|gb|ELA47038.1| hypothetical protein VCUG_01483 [Vavraia culicis 'floridensis']
Length = 316
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 70 VRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF- 128
++ K E +L + T+RE+FY SP F Q VN+ I D A LH R
Sbjct: 42 IKELKFYEIIHGMLVDNIKKTKREIFYA----SPNIFKRQETVNKMI-DRFAHLHKIRLI 96
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL--SLLEKLDLKTDARYII 186
+ AS +GL G + E + Y++ +L + E ++++ ++
Sbjct: 97 DFNVAASLKGLFYGEITFIEHGK-----------TYTLHQNLIPDMNEIVEIRCRFSSVL 145
Query: 187 VVEKHAIFQRLTEDFVFNQ--IPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
VVEK + + E F+ N I +L+T KGYPD T L RL + I L D +
Sbjct: 146 VVEKDCMMTFIKEVFLRNNKTINFLLVTGKGYPDHNTLAFLQRLEHM--NCQIYGLFDLD 203
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV--QLIPEQSLLPLKPRDLQIAR 302
P GL I +K C + +G+ DV I + L+ L RD ++
Sbjct: 204 PFGLNIFRNYK-----------SKICGMLRVGITSRDVFEYKIIKNELIALTQRDCKLLT 252
Query: 303 SLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADY 354
L + I+ + E++S + G++ E+E + ++ +Y+ KK++ + Y
Sbjct: 253 GL-KNNIVDNEFSEDISFLEGLGKKMEIEIFTSYHTTFIVQYLEKKLMISSY 303
>gi|167042185|gb|ABZ06918.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
gi|167044315|gb|ABZ08994.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 365
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L + RS S+ ++F ++ + ++ Q+K T R+++Y + F Q
Sbjct: 61 LGANTAVRSSRNSSQLRSFTQLMWLAFFANRLTGQKKSSTLRDVYYSSQAFEVD-FEDQA 119
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+L R S + R V G L ++ P + + GY+I
Sbjct: 120 ESDNIIVDLEAVLASPRESFHVFPEERSSVFGDLTIEYTVPGYQGKKTNLSDHPDGYAIG 179
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E ++ T A +I VEK +F R E+ V + +I++ G +TR LL R
Sbjct: 180 PSLTTAELIE--TSAEVVIAVEKGGLFTRFVEEQVDKKFKAIIVDTGGQAPRSTRTLLKR 237
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 238 LHDEL-SLPVVILTDGDVYGEHIAMVIKSGSANAAHLRGLTVPDAKWVGVWATDIEKY-K 295
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L+ QE +K+EL + + ++AE+EA +G + KY+
Sbjct: 296 LPTIPMTESDIKRCHDLLKDPRYQEGIWKKELEVFLKIKRKAELEAFSKYGLTNITDKYL 355
Query: 346 AKKI 349
K+
Sbjct: 356 PHKL 359
>gi|256073778|ref|XP_002573205.1| meiotic recombination protein spo11 [Schistosoma mansoni]
gi|353231619|emb|CCD78037.1| putative meiotic recombination protein spo11 [Schistosoma mansoni]
Length = 158
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 14/109 (12%)
Query: 157 SACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL-TEDFVFNQIPSILITAKG 215
S C S+GY+ + ++I+++EK IF++L E F P +L+TAKG
Sbjct: 39 SMCLSTGYT-------------ECLPQFILIIEKDTIFRKLLNEKFYEKFKPCLLVTAKG 85
Query: 216 YPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGME 264
YPD+ TR L ++N P++PI+ L D +P GL + CT+K+G+ M+
Sbjct: 86 YPDLITRKFLAQINCKHPNIPIIGLFDADPHGLNVFCTYKYGTTNPMMQ 134
>gi|148674667|gb|EDL06614.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_d [Mus musculus]
Length = 182
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Query: 133 VASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
+++S+GL+AG L E + + C+ C ++ ++ ++ ++ L TDA+++++VEK A
Sbjct: 23 LSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHL--ITDAKFLLIVEKDA 79
Query: 193 IFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAG 247
FQRL +D F P I++T KG PD+ TR L+ +L F +P+ LVD +P G
Sbjct: 80 TFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTF-HIPVFTLVDADPYG 134
>gi|116199071|ref|XP_001225347.1| hypothetical protein CHGG_07691 [Chaetomium globosum CBS 148.51]
gi|88178970|gb|EAQ86438.1| hypothetical protein CHGG_07691 [Chaetomium globosum CBS 148.51]
Length = 1001
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 23/160 (14%)
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
L R LGIVA+++GL++G + + + + C G +G ++ +S ++K++ +
Sbjct: 9 LAVGREDLGIVAAAKGLISGPIDIILRDGSIHSCDVAGDTG-TLLPSISSIQKINFRA-T 66
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
R+++V+EK A KG+PD+ TR L ++ P L + LVD
Sbjct: 67 RWVLVIEKEA---------------------KGFPDLTTRRFLSVISTLRPQLDLFILVD 105
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
++P G+AI+ T+++GS + E ++WLG+ DD+
Sbjct: 106 FDPHGVAIMRTYRYGSRRLDHEENATVPRLRWLGIVSDDI 145
>gi|300705745|ref|XP_002995228.1| hypothetical protein NCER_101961 [Nosema ceranae BRL01]
gi|263511524|sp|C4VB43.1|SPO11_NOSCE RecName: Full=Probable meiosis-specific protein SPO11 homolog
gi|239604174|gb|EEQ81557.1| hypothetical protein NCER_101961 [Nosema ceranae BRL01]
Length = 271
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 40/270 (14%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG 142
L+ K +RE++Y +S F Q V+ I+D L C++ L I + +G+ G
Sbjct: 40 LTLNKIKNKREIYY----NSVSIFKKQSIVDMLIKDTCNKLKCTQSDLLISTTLKGVFYG 95
Query: 143 RLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFV 202
+ + N+ V G S+ D++ +++++ + +++EK IF + +++
Sbjct: 96 NITFYKNNKLV----HVNLKGTSLIPDMNQIDRIEY--TQKKCLIIEKDTIFSKTVREYI 149
Query: 203 FNQIPSILITAKGYPDIATRFLLHRLN-RAFPDLPILALVDWNPAGLAILCTFKFGSIGM 261
N I + I KGYP T L+++LN R + + D++P GL I CT K+ SI
Sbjct: 150 SNDI--LFICGKGYPCRNTLLLVNKLNIRKY------GIFDFDPYGLEI-CT-KYPSI-- 197
Query: 262 GMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLM 321
K +G+ D+ LI +Q + L D++ +L+ ++ Y+ EL M
Sbjct: 198 -----------KKIGIDIKDINLIDKQHFMILNKYDIRKINTLLKQKV----YEIELFYM 242
Query: 322 VHNGQRAEVEALY-FHGYDYLGKYIAKKIV 350
+ N + E+E L+ G+D + Y KI+
Sbjct: 243 LKNNIKIEIEGLFSAKGFD-INNYFYTKII 271
>gi|386876676|ref|ZP_10118766.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
gi|386805513|gb|EIJ65042.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
Length = 368
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L ++ RS S+ ++F ++ + ++ ++K T R+++Y + E F Q
Sbjct: 64 LGNNAALRSSRNSSQLRSFTQLMWLAFFANRLTKEKKSSTLRDVYYSSQAFAIE-FEDQS 122
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+ R I R + G L ++ P E + GYSI
Sbjct: 123 ESDNIIVDLEAVTSKPREDFHIFPEERSSIFGDLTIEYTIPGYEGKTMNLSNHPDGYSIG 182
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E +D T A +I +EK +F R E+ + + SI+I G +TR LL R
Sbjct: 183 PSLTTAELVD--TSAEIVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKR 240
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 241 LHDEMK-LPVIVLTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKY-K 298
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L Q+ +K+EL + + ++AE+EA +G + KY+
Sbjct: 299 LPTIPMTESDIKRCYDLQKDPRYQDGIWKKELDVFLRLKRKAELEAFSKYGLTNITDKYL 358
Query: 346 AKKI 349
+K+
Sbjct: 359 PQKL 362
>gi|448624639|ref|ZP_21670587.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
gi|445749844|gb|EMA01286.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
Length = 366
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E + L +++ T REL+Y + + +
Sbjct: 54 WVYGDRT-SKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTLRELYYISESWDNEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + R + G + G L ++E I C G
Sbjct: 113 FSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIREQTNRGDREIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD D +++ VE + RL E+ + ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFLDHDID--FVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPEAKFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMGDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|448455341|ref|ZP_21594521.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
gi|445813943|gb|EMA63916.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
Length = 361
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 137/303 (45%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLADQLDEDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+SQ + N ++D+ + +R + G + G L+++E + I C G
Sbjct: 108 FSSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLLIREQTRRGEREIHCQEDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
+ GY I + ++E LD D + + VE + RL E+ + ++I KG P A
Sbjct: 168 AGGYQIPNNPDMIEFLD--DDIDFALAVETGGMRDRLVENGFDEEYNCLVIHLKGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + R++ D+PI D +P I + +GSI + Y +++G++
Sbjct: 226 TRRITKRVHDEL-DVPIAVFADGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQP 284
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
+D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 285 EDI-VEYDLPADPLSDSDVNALESELDDPRFQTDYWEEQIELQLDIGKKSEQQSLASRGL 343
Query: 339 DYL 341
D++
Sbjct: 344 DFV 346
>gi|330507581|ref|YP_004384009.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
gi|328928389|gb|AEB68191.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
Length = 375
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 14/316 (4%)
Query: 45 DVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF-QILSQEKRVTQRELFYKLLCDSP 103
D WI+ RS+ AK ++ + E + L + T RE++Y
Sbjct: 61 DDVWIYGDQE-TMRSVKTVRGAKTILKTVHLTELLIDEHLKNNRGSTLREIYYISENWDI 119
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCSA- 158
F Q + +R I+D+ + R + G V G L L+E ++ + C
Sbjct: 120 AKFHEQAESDRLIEDLEIVTDLHREDFHVRPEEDGAAVFGPLRLKEQTRRGEKEMHCQED 179
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G +GY I ++ +E ++ DAR ++ +E ++ RL E+ + +IL+ KG P
Sbjct: 180 VGEAGYQIPFNVDNIEFIN--HDARMVMAIETGGMYARLIENGFDEEYNAILVHIKGQPA 237
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
+TR ++ RLN +LP++ D +P I + +G+I + + ++LG+
Sbjct: 238 RSTRRIIKRLNTEL-NLPVVVFTDGDPWSYRIFASIAYGAIKSAHLSDHLVTPKARFLGV 296
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKE-ELSLMVHNGQRAEVEALYFH 336
+ D+ + S L RDLQ +S +S Y E ++ L + ++AE +A
Sbjct: 297 QPSDI-VDYNLSTDKLTDRDLQALKSELSDPRFANPYWEKQIHLQIDLKKKAEQQAFAGK 355
Query: 337 GYDYLGK-YIAKKIVQ 351
G D++ K Y+ ++ +
Sbjct: 356 GLDFVTKTYLPDRLTE 371
>gi|167385195|ref|XP_001737243.1| meiotic recombination protein SPO11 [Entamoeba dispar SAW760]
gi|165900029|gb|EDR26491.1| meiotic recombination protein SPO11, putative [Entamoeba dispar
SAW760]
Length = 340
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 31/279 (11%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K + ++ ++ T ++++ K+ T REL+Y F Q ++ I+D+ L +
Sbjct: 49 KKYFKLLVILSTIYELILTNKQFTVRELYY----THKTIFKDQTELENLIRDIKLLFGVN 104
Query: 127 RFS-LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE---KLDLKTDA 182
+ L + + RG++ G + L P V+D ++ L +L + +
Sbjct: 105 DLNILHLTHTPRGILFGEVTLVTP-IYVMD--------FTKKLQLPILSSPFQFIIPNRR 155
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
++++VEK A F+RL + + +Q P I++ ++G+PD AT + H L + +P LVD
Sbjct: 156 CFLLIVEKEAFFERLVQSHLSDQFPCIILCSRGFPDNATFTIAHHLTQKLNIIP-CCLVD 214
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACN------VKWLGLRGDDVQLIPEQSLLPLKPR 296
+ G+ I TF GS + N ++W LR D + I PL R
Sbjct: 215 GDVYGIEIFLTFLCGSWKKNGISRISKQNDEGISLLRWSLLRPSDTKGIS-----PLTDR 269
Query: 297 DLQIARSLMSSEILQENYKEELSL--MVHNGQRAEVEAL 333
+ IA ++ SE+++ N + EL + ++ N + E++ L
Sbjct: 270 EKVIANHMLESEVVKCNQEIELEIKTLLKNNTKMELDEL 308
>gi|410720325|ref|ZP_11359681.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
gi|410601107|gb|EKQ55627.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
Length = 351
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 44 TDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP 103
T+ + L + RSL ++ V C ++ + K T RE++Y + +
Sbjct: 44 TEKRYYVLGDRYGKRSLGNVKQITKIGQMVYVANFCKDLVRRGKTATLREMYY--VSEGW 101
Query: 104 EY-FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGS 161
+ F Q + N +D+ L +R LG++ G V G + LQ+ + E I+ G
Sbjct: 102 DVDFGDQQESNIVGEDLEVTLGMTREDLGLMPEEDGASVYGNITLQDDDVE-INALRAGK 160
Query: 162 SGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIAT 221
SGY+IS + ++ LD D + +I VE +F RL ++ + + ++++ KG AT
Sbjct: 161 SGYTISPTIDDIKFLD--HDVKRVIAVETMGMFHRLVQENAYKKFDTLIVGLKGQAARAT 218
Query: 222 RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGD 280
R L R+N +LP+ D +P G I GS + ++ A + K+LG+
Sbjct: 219 RRFLKRVNEEL-NLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTAS 277
Query: 281 DV 282
D+
Sbjct: 278 DI 279
>gi|194704998|gb|ACF86583.1| unknown [Zea mays]
Length = 212
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 55/259 (21%)
Query: 103 PEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS 162
P F V+R I D+ L CSR +L +V +GLV G + E ++V C ++
Sbjct: 3 PSIFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLVMGWIRFMEGEKKVY-CITSVNA 61
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
+SI D+ ++ D+ + A YI+VVEK +FQRL D + I+IT +
Sbjct: 62 AFSIPVDIEAIK--DVVSVAHYILVVEKETVFQRLANDKFCERNRCIVITQLAH------ 113
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
D +L + D ++WLG+ D
Sbjct: 114 -----------DANLLRVPD-----------------------------IRWLGVFTSDF 133
Query: 283 Q--LIPEQSLLPLKPRDLQIARSLMSSEILQE---NYKEELSLMVHNGQRAEVEALYFHG 337
+ +P+ LL L P D + A +++ L ++ EL M+ G + E+EAL +
Sbjct: 134 EEYCLPDCCLLRLSPEDRRKAEGILARCYLHREAPEWRSELEAMLQKGVKFEIEALSANS 193
Query: 338 YDYLG-KYIAKKIVQADYI 355
+L +YI +KI Q ++
Sbjct: 194 ISFLSHEYIPQKIKQGMHL 212
>gi|374630622|ref|ZP_09703007.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
gi|373908735|gb|EHQ36839.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
Length = 362
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 137/296 (46%), Gaps = 13/296 (4%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
RS + + +A +++ V+ ++ + T RE++Y F++Q + N
Sbjct: 59 TVRSASSAKSALHLLKMAHVVGFLKNQIADNRSSTLREMYYISEGWKRAKFSAQDESNML 118
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCSA-CGSSGYSISGDL 170
++D+ + SR + + G + G L ++E +++I C G +GY I ++
Sbjct: 119 VEDLEIITELSREAFHLRPEEDGAAIYGPLRIKEQTRRGEKIIHCQEDVGEAGYPIPNNV 178
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
+ LE +D DA+++I +E ++ RL E+ + ++L+ KG P +TR +L RLN
Sbjct: 179 NNLELID--HDAKFVIAMETGGMYARLMENGFDEEHNAVLVHLKGQPARSTRRVLKRLNS 236
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQL--IPE 287
LP++ D +P I + +GSI M +++G++ D+ +P
Sbjct: 237 EL-GLPVVIFTDGDPWSYRIFASIAYGSIKAAHMSEILATPGAQFIGVQPSDISNYDLPA 295
Query: 288 QSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK 343
L L+ L E +++E++L + G ++E +A G D++ K
Sbjct: 296 DKLTEGDIAALKA--ELTDPRFDTEYWRKEINLQLKLGLKSEQQAFASRGLDFVTK 349
>gi|410672036|ref|YP_006924407.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
gi|409171164|gb|AFV25039.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
Length = 369
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVA- 141
L+Q + T REL+Y F Q + +R I+D+ + R + G
Sbjct: 93 LNQNRGSTLRELYYISENWDIAKFREQPESDRLIEDLEIISGLQREYFHMRPEEDGATMF 152
Query: 142 GRLMLQEPNQE---VIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G + ++E + VI C G SGY I ++ +E LD DA +II +E ++ RL
Sbjct: 153 GPVRIREETKRGNRVIHCQEDIGESGYQIPFNVENIEFLD--HDADFIIAIETGGMYARL 210
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ + ++L+ KG P +TR ++ R+N LP++ D +P I + +G
Sbjct: 211 IENGFDEKYNAVLVHLKGQPARSTRRIIKRMNDELK-LPVVVFTDGDPWSYRIFASVAYG 269
Query: 258 SIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-K 315
+I + A +++G++ D+ + E S L +D+ RS ++ + +Y K
Sbjct: 270 AIKSAHLSEHMATPGAQFIGVQPSDI-VEYELSTDKLTDKDVAALRSELTDPRFETDYWK 328
Query: 316 EELSLMVHNGQRAEVEALYFHGYDYL 341
E+++L + ++AE +A G D++
Sbjct: 329 EQINLQLEINKKAEQQAFAGKGLDFV 354
>gi|448479369|ref|ZP_21604221.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
gi|445822647|gb|EMA72411.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
Length = 361
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLANQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F SQ + N ++D+ + +R + G V G L ++E I C G
Sbjct: 108 FKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLEIREQTNRGDREIHCQLDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ ++++ G P A
Sbjct: 168 QGGYQIPNNPDTIEFLD--NDAEFVLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R R DLP++ D +P I + +GSI + Y +++G++
Sbjct: 226 TRRLTKRF-RDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQP 284
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 285 EDIVEYDLPSD---PLSDSDINALESELDDPRFQTDYWEEQIELQLDIGKKSEQQSLASR 341
Query: 337 GYDYL 341
G D++
Sbjct: 342 GLDFV 346
>gi|429190415|ref|YP_007176093.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|448326327|ref|ZP_21515693.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
gi|429134633|gb|AFZ71644.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|445612542|gb|ELY66263.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
Length = 363
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 140/314 (44%), Gaps = 15/314 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ ++ L +++ T REL+Y + +
Sbjct: 51 WVYGDRE-STRSANSVRGARKLLKAVYTIDFLADQLEEDRSSTLRELYYLSESWDNEEAQ 109
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+ Q + N I+D+ + +R + G + G L L+E + I C G
Sbjct: 110 FSDQDESNSLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLREQTRRGEREIHCQEDVG 169
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD + D +I+ VE + RL E+ + ++++ KG P A
Sbjct: 170 EGGYQIPNNPDTIEFLDCEAD--FILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARA 227
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL LP+ D +P I + +GSI + Y +++G++
Sbjct: 228 TRRITKRLRDELS-LPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPQAQFIGVQP 286
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D S +S Q +Y +E++ L + +++E ++L HG
Sbjct: 287 ADI-VEYDLPTDPLSDSDKNALESELSDPRFQTDYWEEQIELQLEIEKKSEQQSLASHGL 345
Query: 339 DYLGK-YIAKKIVQ 351
D++ + Y+ +++ +
Sbjct: 346 DFVTETYLPERLSE 359
>gi|448595855|ref|ZP_21653302.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
gi|445742309|gb|ELZ93804.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
Length = 366
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E + L +++ T REL+Y + + +
Sbjct: 54 WVYGDRT-SKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTLRELYYISESWDNEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + R + G + G L ++E I C G
Sbjct: 113 FSDQDESNKLIEDLEIVSDVKREDFHMRPEESGAKLMGPLKIREQTNRGDREIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L + D +++ VE + RL E+ + ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFL--EHDVEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y + K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMGDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|448423790|ref|ZP_21582123.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|448448963|ref|ZP_21591461.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
gi|448506626|ref|ZP_21614582.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|448524343|ref|ZP_21619325.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445683047|gb|ELZ35452.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|445699576|gb|ELZ51600.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|445700413|gb|ELZ52414.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445814055|gb|EMA64027.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
Length = 361
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLANQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F SQ + N ++D+ + +R + G V G L ++E I C G
Sbjct: 108 FKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLEIREQTNRGDREIHCQLDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ ++++ G P A
Sbjct: 168 QGGYQIPNNPDTIEFLD--NDAEFVLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R R DLP++ D +P I + +GSI + Y +++G++
Sbjct: 226 TRRLTKRF-RDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQP 284
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 285 EDIVEYDLPSD---PLSDSDINALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASR 341
Query: 337 GYDYL 341
G D++
Sbjct: 342 GLDFV 346
>gi|435850856|ref|YP_007312442.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
gi|433661486|gb|AGB48912.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
Length = 369
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 11/266 (4%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVA- 141
LSQ + T REL+Y F Q + +R I+D+ + R + G
Sbjct: 93 LSQNRGSTLRELYYISENWDIAKFREQPESDRLIEDLEIITGLQREYFHMRPEEDGATMF 152
Query: 142 GRLMLQEPNQE---VIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G + ++E + I C G SGY I ++ +E LD DA +II +E ++ RL
Sbjct: 153 GPIRIREDTKRGDRTIHCQEDIGESGYQIPFNVENIEFLD--HDADFIIAIETGGMYARL 210
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ + +IL+ KG P +TR ++ R+N LP++ D +P I + +G
Sbjct: 211 IENGFDEKYNAILVHLKGQPARSTRRIIKRMNEELS-LPVVVFTDGDPWSYRIFASVAYG 269
Query: 258 SIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-K 315
+I + A ++G++ D+ + E S L +D+ RS +S +Y K
Sbjct: 270 AIKSAHLSEHMATPGAMFIGVQPSDI-VEYELSTDKLTEKDVGALRSELSDPRFATDYWK 328
Query: 316 EELSLMVHNGQRAEVEALYFHGYDYL 341
E+++L + ++AE +A G D++
Sbjct: 329 EQINLQLEINKKAEQQAFAGKGLDFV 354
>gi|448529391|ref|ZP_21620529.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
gi|445709153|gb|ELZ60986.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
Length = 361
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLADQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F SQ + N ++D+ + +R + G V G L ++E I C G
Sbjct: 108 FKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLEIREQTNRGDREIHCQLDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD DA +++ VE + RL E+ ++++ G P A
Sbjct: 168 QGGYQIPNNPDTIEFLD--NDAEFVLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L R R DLP++ D +P I + +GSI + Y +++G++
Sbjct: 226 TRRLTKRF-RDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQP 284
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 285 EDIVEYDLPSD---PLSDSDINALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASR 341
Query: 337 GYDYL 341
G D++
Sbjct: 342 GLDFV 346
>gi|448570959|ref|ZP_21639470.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
gi|445722877|gb|ELZ74528.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
Length = 366
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E + L +++ T REL+Y + + +
Sbjct: 54 WVYGDRT-SKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTLRELYYISESWDNEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + R + G + G L ++E I C G
Sbjct: 113 FSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIREQTNRGDREIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L + D +++ VE + RL E+ + ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFL--EHDIEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y + K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMGDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|294495184|ref|YP_003541677.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
gi|292666183|gb|ADE36032.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
Length = 367
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 149/327 (45%), Gaps = 15/327 (4%)
Query: 26 LPLINRKS-SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQ-IL 83
+P +N S + + + ++DV W++ RS A ++ V++ +
Sbjct: 34 IPYVNMPSRTKNNIEFNEISDV-WVYGGRE-SERSAKTVKGAFQLLKTSHVLDFLLNNHI 91
Query: 84 SQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAG 142
+ T REL+Y F Q + +R I+D+ + R + G + G
Sbjct: 92 GNNRGSTLRELYYISENWDIAKFKEQPESDRLIEDLEIISSLQREYFHMRPEEDGATLFG 151
Query: 143 RLMLQEPNQEV---IDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLT 198
L L+E + I C G SGY I ++ ++ +D DA++II +E ++ RL
Sbjct: 152 PLQLREETKRGDRDIHCQEDVGESGYQIPFNVENIDFID--HDAKFIIAIETGGMYARLI 209
Query: 199 EDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGS 258
E+ +IL+ KG P +TR ++ R+N +P++ D +P I + +G+
Sbjct: 210 ENGFDELNDAILVHLKGQPARSTRRMIKRMNEELG-IPVVVFTDGDPWSYRIYASVAYGA 268
Query: 259 IGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KE 316
I + + K++G++ D+ + E S L +D+ RS ++ + +Y KE
Sbjct: 269 IKSAHLSEFMATPAAKFVGVQPSDI-VEYELSTDKLTDKDVDALRSELTDPRFETDYWKE 327
Query: 317 ELSLMVHNGQRAEVEALYFHGYDYLGK 343
+++L + G++AE +A G D++ K
Sbjct: 328 QINLQLDIGKKAEQQAFAGKGLDFVTK 354
>gi|448540823|ref|ZP_21623744.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|448549126|ref|ZP_21627902.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|448555700|ref|ZP_21631629.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
gi|445708976|gb|ELZ60811.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|445713815|gb|ELZ65590.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|445717223|gb|ELZ68941.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
Length = 366
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E + L +++ T REL+Y + + +
Sbjct: 54 WVYGDRT-SKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTLRELYYISESWDNEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + R + G + G L ++E I C G
Sbjct: 113 FSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIREQTNRGDREIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L+ D +++ VE + RL E+ + ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFLEHDID--FVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y + K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMGDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|292655720|ref|YP_003535617.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|448289706|ref|ZP_21480869.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|291370288|gb|ADE02515.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|445581223|gb|ELY35584.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
Length = 366
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E + L +++ T REL+Y + + +
Sbjct: 54 WVYGDRT-SKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTLRELYYISESWDNEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + R + G + G L ++E I C G
Sbjct: 113 FSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIREQTNRGDREIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L+ D +++ VE + RL E+ + ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFLEHDID--FVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y + K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMGDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|354611442|ref|ZP_09029398.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
gi|353196262|gb|EHB61764.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + TRS A+ ++ ++ L ++ T REL+Y + +
Sbjct: 52 WVYGDRT-STRSANSVRGARKLLKSVYTVDFLAHQLDDDRSSTLRELYYLSESWDEKEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSACG 160
F Q + ++ ++D+ + R + G V G L+L+E ++E+ G
Sbjct: 111 FNDQSESDKLVEDLEIVSGVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD +DA +I+ VE + RL E+ + +++ G P A
Sbjct: 171 QGGYQIPNNPDTIEFLD--SDADFILAVETGGMRDRLVENGFDGEYNCLVVHLGGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L RL+ LP+ D +P I + +GSI + Y +++G+R
Sbjct: 229 TRRLTKRLHDEVG-LPVTVFTDSDPWSYRIFGSVAYGSIKSAHLSEYLATPEAQFIGIRP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
+D+ + E PL D+ S + Q ++ E++ L + ++AE +AL G
Sbjct: 288 EDI-VDYELPTDPLSDSDINALESELEDPRFQSDFWTEQIELQLDIDKKAEQQALASRGL 346
Query: 339 DYL 341
D++
Sbjct: 347 DFV 349
>gi|448414640|ref|ZP_21577653.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
gi|445681749|gb|ELZ34177.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
Length = 364
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ TRS A+ ++ +E L + + T REL+Y + +
Sbjct: 52 WVYGDRK-STRSANSVRGARKLLKAAYAIEFLVNQLEENRSSTLRELYYLSESWDNEEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEV---IDCSA-CG 160
F Q + N+ I+D+ + H +R + G V G L ++E + I C G
Sbjct: 111 FNDQSESNQLIEDLEIVSHVTREDFHMRPEESGAKVMGPLHIREQTRRGDRDIHCQEDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L DA +++ VE + RL E+ + ++++ G P A
Sbjct: 171 QGGYQIPNNPDTIEFL--GNDAEFVLCVETGGMRDRLVENGFDTEHDALVVHLGGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR L RL+ LP++ D +P I + +GSI + Y K++G++
Sbjct: 229 TRRLTKRLHDELG-LPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S L + + ++E++ L + ++AE ++L G
Sbjct: 288 QDI-VDYDLPTDPLSDSDVNALESELEDPRFMTDYWEEQIQLQLDINKKAEQQSLAARGL 346
Query: 339 DYL 341
D++
Sbjct: 347 DFV 349
>gi|407465398|ref|YP_006776280.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
gi|407048586|gb|AFS83338.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
Length = 373
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L ++ RS S ++F ++ + ++ ++K T R+++Y + E F Q
Sbjct: 69 LGNNAAVRSSRNSAQLRSFTQLMWLAFFANRLTHEKKSSTLRDVYYSSQAFAIE-FEDQS 127
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+ R I R + G L ++ P E + GYSI
Sbjct: 128 ESDNIIVDLEAVTSKPREDFHIFPEERSSIFGDLNIEYTIPGYEGKTMNLSNHPDGYSIG 187
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E +D T A +I +EK +F R E+ + + SI+I G +TR LL R
Sbjct: 188 PSLTTAELVD--TSAEIVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKR 245
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 246 LHDEM-GLPVIVLTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKY-K 303
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L Q+ +K+EL + + ++AE+EA +G + KY+
Sbjct: 304 LPTIPMTESDIKRCYDLQKDPRYQDGIWKKELDVFLRLKRKAELEAFSKYGLTNITDKYL 363
Query: 346 AKKI 349
+K+
Sbjct: 364 PQKL 367
>gi|343425344|emb|CBQ68880.1| related to meiotic recombination protein SPO11 [Sporisorium
reilianum SRZ2]
Length = 358
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 54/255 (21%)
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP-NQEVIDCSACGSSGY 164
F +Q +RTI V LL C R +L IVAS RGLV+G L L P I C G+
Sbjct: 101 FATQQASDRTIAHVATLLGCDRAALNIVASPRGLVSGPLTLHPPFPSTPIAC----QPGH 156
Query: 165 S--ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTE----------DFVFNQIPSILIT 212
+ I ++ L ++D+ + ++VVEK A+F L + + + +++T
Sbjct: 157 ATLIPPEIDLHWRVDMWCERPLVLVVEKEAVFTHLLQLQLCTPATRGERAVDWGRVVMVT 216
Query: 213 AKGYPDIATRFLLHRLN-RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC- 270
AKGY D ATR LL L RA + L D +P G+ I +R C
Sbjct: 217 AKGYADQATRALLQLLGVRA------VGLFDADPYGVDI---------------HRQFCS 255
Query: 271 --NVKWLGLRGDDVQLIP-----EQSLLPLKPRD----LQIARSLMSSEILQENYKEELS 319
+V+W+G+ D P +L+PL+ + +++ R L +S E + L+
Sbjct: 256 AHSVEWIGV--DLSDFAPPLAGQNSALVPLRNDERATAVRLLRGLGTSHD-DERVRARLT 312
Query: 320 LMVHNGQRAEVEALY 334
M+ G +AE+EA Y
Sbjct: 313 DMLLTGYKAEIEAAY 327
>gi|313126398|ref|YP_004036668.1| DNA topoisomerase vi subunit a [Halogeometricum borinquense DSM
11551]
gi|448286242|ref|ZP_21477476.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
gi|312292763|gb|ADQ67223.1| DNA topoisomerase VI, subunit A [Halogeometricum borinquense DSM
11551]
gi|445575075|gb|ELY29557.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
Length = 364
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ TRS A+ ++ +E L + + T REL+Y D+ E
Sbjct: 52 WVYGDRK-STRSANSVRGARKLLKATYAIEFLVNQLEEGRSSTLRELYYLSESWDTEEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F Q + N+ I+D+ + + +R + G + G L L+E + I C G
Sbjct: 111 FNDQDESNQLIEDLEIVSNVTREDFHMRPEESGATLMGPLELREQTRRGEREIHCQEDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E LD D +++ VE + RL E+ + +++ KG P A
Sbjct: 171 EGGYQIPNNPDTIEFLDHDID--FVLCVETGGMRDRLIENGFDEEYGCLVVHLKGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y +++G++
Sbjct: 229 TRRITKRLHDEL-DLPVMVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFVGIQP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S L + + ++E++ L + ++AE +AL G
Sbjct: 288 QDI-VDYDLPTDPLSDSDINALESELEDPRFMTDYWEEQIELQLDIEKKAEQQALASRGL 346
Query: 339 DYL 341
D++
Sbjct: 347 DFV 349
>gi|448603024|ref|ZP_21656845.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
gi|445746220|gb|ELZ97682.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
Length = 366
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W++ + RS A+ ++ +E + L +++ T REL+Y + + +
Sbjct: 54 WVYGDRT-SKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTLRELYYISESWDNEEAH 112
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACG 160
F+ Q + N+ I+D+ + R + G + G L ++E I C G
Sbjct: 113 FSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIREQTNRGDREIHCQLDVG 172
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + +E L+ D +++ VE + RL E+ + ++++ G P A
Sbjct: 173 QGGYQIPNNPDTIEFLEHDID--FVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 230
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ DLP++ D +P I + +GSI + Y K++G++
Sbjct: 231 TRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPEAKFVGIQP 289
Query: 280 DDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ +S L + + + E++ L + G++AE +AL G
Sbjct: 290 QDI-VDYDLPTDPLADSDINALQSELEDPRFMGDYWTEQIELQLDIGKKAEQQALASRGL 348
Query: 339 DYL 341
D++
Sbjct: 349 DFV 351
>gi|403366622|gb|EJY83114.1| DNA topoisomerase VI, subunit A [Oxytricha trifallax]
Length = 314
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 32/280 (11%)
Query: 73 WKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGI 132
++ M T Q+ +V +R ++Y L+ DS S ++++ I ++ +L R L I
Sbjct: 13 FQQMRTIHQL-----KVNKRAVYYSLI-DSN--IGSTMELDGYISEICLILSLHRDDLLI 64
Query: 133 VASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
ASS+GL+ G + + ++E++ S D EK+ K A+ +++VEK
Sbjct: 65 KASSKGLMFGGGIDSDLSEELLINQLQIPS----LTDEQFYEKILPKLKAKVVLLVEKDT 120
Query: 193 IFQRLTED--FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAI 250
+F RLT+ F+ N+ +L+T KGYPD AT+ + L++ LPIL L D + G I
Sbjct: 121 VFSRLTQQQYFIQNREHILLLTGKGYPDYATKRFVKMLSQ-IAHLPILYLGDADSFGADI 179
Query: 251 LCTFKFGSIGMGMEAYRYACN-VKWLGLRGDDVQLIPEQSL----------LPLKPRDLQ 299
+ FG+ ++ C ++W+G D + I +Q L L KP
Sbjct: 180 YFQYAFGNQNSSVDQDDINCPLIQWIGPFMQDFKDIKKQDLSEKDKLKIYSLLTKPYFKN 239
Query: 300 IARSLMSSEILQ------ENYKEELSLMVHNGQRAEVEAL 333
+ SEI + + YK L LM ++ E+EAL
Sbjct: 240 YSEQECHSEIHKSILKNLQLYKGHLILMERENKKFEIEAL 279
>gi|452207167|ref|YP_007487289.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
gi|452083267|emb|CCQ36553.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
Length = 370
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 147/331 (44%), Gaps = 17/331 (5%)
Query: 20 DPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETC 79
D ++ ++ + R SN + DV W++ + TRS A+ ++ +E
Sbjct: 33 DGSVPEMEIPTRTKSNIVFDED--ADV-WVYGDRT-STRSANSVRGAQKLLKAIYTIEFL 88
Query: 80 FQILSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSR 137
L Q + T REL+Y + + FT Q + N+ ++D+ + +R +
Sbjct: 89 ADQLDQGRSSTLRELYYLSESWDEERAQFTGQDESNQLVEDLEIVSGVTREDFHMRPEES 148
Query: 138 G-LVAGRLMLQEP---NQEVIDCSA-CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
G + G L L+E + I C G GY I + +E LD DA +++ VE
Sbjct: 149 GATIMGPLYLREQTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLD--HDADFVLCVETGG 206
Query: 193 IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+ RL E+ I++ KG P ATR + RL+ DLP + D +P I
Sbjct: 207 MRDRLVENGFDEAYNVIVVHLKGQPARATRRITRRLDAEL-DLPTVVFCDGDPWSYRIYA 265
Query: 253 TFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQ 311
+ +GSI + Y + +++G++ D+ + E PL D+ S + Q
Sbjct: 266 SVAYGSIKSAHLSEYLATPDAEYVGIQPVDI-VNYELPTDPLSDSDVNALESELEDPRFQ 324
Query: 312 ENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
++Y E++ L + G++AE +AL G D++
Sbjct: 325 DDYWTEQIELQLDIGKKAEQQALASRGLDFV 355
>gi|126179533|ref|YP_001047498.1| DNA topoisomerase VI subunit A [Methanoculleus marisnigri JR1]
gi|125862327|gb|ABN57516.1| Spo11/DNA topoisomerase VI, subunit A [Methanoculleus marisnigri
JR1]
Length = 362
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 23/301 (7%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
TR+ T A +++ ++ Q L + + T REL+Y F +Q + N
Sbjct: 59 STRAATNEKGAVHLLKMAYLIGFLKQQLVENRSSTLRELYYISEGWKKAKFGAQDESNHL 118
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSAC----GSSGYSISGDL 170
I+D+ + R + + G V G L ++E + + C G +GY I ++
Sbjct: 119 IEDLEIITEVQREAFHLRPEEDGASVFGPLRIRETTRRGVKEMHCQEDVGEAGYPIPNNV 178
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
LE +D DA+++I +E ++ RL E+ + ++L+ KG P +TR +L +LN
Sbjct: 179 DNLEFVD--HDAKFVIAIETGGMYARLMENGFDEEYGAVLVHLKGQPARSTRRVLRKLND 236
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDV------- 282
+ LP++ D +P I + +GSI M +++G++ D+
Sbjct: 237 SL-GLPVVVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPSDISDYNLPA 295
Query: 283 QLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLG 342
+ EQ + LK L + ++ +++L + ++E +A G D++
Sbjct: 296 DKLTEQDVSALKA-------ELTDPRFATDYWRSQINLQLEMKLKSEQQAFASRGLDFVT 348
Query: 343 K 343
K
Sbjct: 349 K 349
>gi|219852783|ref|YP_002467215.1| DNA topoisomerase VI subunit A [Methanosphaerula palustris E1-9c]
gi|219547042|gb|ACL17492.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosphaerula palustris
E1-9c]
Length = 362
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 18/297 (6%)
Query: 59 SLTKSNAAKAFVRVWK---VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
SL +++AK+ + + K V+ Q L + + T RE++Y F +Q + N
Sbjct: 59 SLRSAHSAKSALHLLKMSYVIGFLKQQLIENRSSTLREMYYISEGWKKAKFHAQDESNLL 118
Query: 116 IQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSAC----GSSGYSISGDL 170
I+D+ L R + + G V G + L+E + + C G +GY+I ++
Sbjct: 119 IEDLEILTMLQREAFHLRPEEDGATVFGPIRLKEMTRRGVKEIHCQEDVGEAGYAIPNNV 178
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
LE +D DA+++I +E ++ RL E+ + ++L+ KG P +TR +LH ++
Sbjct: 179 ENLEFVD--HDAKFVIAIETGGMYARLQENGFDEEYGAVLVHLKGQPARSTRRVLHMIHE 236
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQ--LIPE 287
F LPI D +P I + +GSI M +++G++ D+ +P
Sbjct: 237 KF-KLPITVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPSDISDYDLPS 295
Query: 288 QSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYLGK 343
+ L RD+ +S +S Y + ++ + G ++E +A G DY+ K
Sbjct: 296 DT---LSERDVLALKSELSDPRFDTEYWRYQIGRQLEIGIKSEQQAFAARGLDYVTK 349
>gi|145967222|gb|ABP99003.1| meiotic transesterase [Acanthamoeba castellanii]
Length = 69
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 215 GYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKW 274
G+PD+ATR LL RL+ LP++ L DWNP G+ + T+++GS+ G+E++ + ++KW
Sbjct: 1 GFPDMATRGLLKRLHEEL-RLPVVGLFDWNPGGMGVYITYRYGSVKSGLESHLHTVDIKW 59
Query: 275 LGLRGDDVQ 283
LGL DD++
Sbjct: 60 LGLCWDDLE 68
>gi|209876858|ref|XP_002139871.1| meiotic recombination protein rec12 [Cryptosporidium muris RN66]
gi|209555477|gb|EEA05522.1| meiotic recombination protein rec12, putative [Cryptosporidium
muris RN66]
Length = 372
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
+ T ++S+ T R++FY +P + Q N TI + L+ R L +V+
Sbjct: 53 ITNTLHGLVSEGYHATLRDIFY----SNPSLYKKQTVSNNTIAMITRLIRIPREFLNVVS 108
Query: 135 SSRGLVAGRLML-------QEPNQEVI---DC-SACGSSGYSISGDLSLLE---KLDLKT 180
+S+G++ G + + + N+ I DC S S G+SIS + L ++++
Sbjct: 109 TSKGMIRGPISVFGSDLSGDKHNRNKIIEFDCLSKIESMGHSISPYICRLMNNWRINIYK 168
Query: 181 DARYIIVVEKHAIFQRLTE-DFV--FNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
+ +++++EK +FQRL E +F+ FN IL+TAKGY D+ TR LL++L P +
Sbjct: 169 NINFVLIIEKDTVFQRLLECNFLEAFNN-SCILLTAKGYSDLPTRALLYQLCNILPYKTL 227
Query: 238 L-ALVDWNPAGLAILCTFKFGS 258
L D++ GL I T+ GS
Sbjct: 228 FWILCDYDAYGLTIGATYIMGS 249
>gi|161528915|ref|YP_001582741.1| DNA topoisomerase VI subunit A [Nitrosopumilus maritimus SCM1]
gi|160340216|gb|ABX13303.1| DNA topoisomerase (ATP-hydrolyzing) [Nitrosopumilus maritimus SCM1]
Length = 370
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 134/304 (44%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L +S RS S ++F ++ + ++ ++K T R+++Y + E F Q
Sbjct: 66 LGNSTALRSAKNSAQLRSFTQLMWLAFFANRLTQEKKSSTLRDVYYSSQAFAIE-FDDQS 124
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+ R I R + G L ++ P E + GYSI
Sbjct: 125 ESDNIIVDLEAVTSRPREDFHIFPEERSSIFGDLNIEYTIPGYEGKKMNLSNHPDGYSIG 184
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E +D T A +I +EK +F R E+ V + SI+I G +TR LL R
Sbjct: 185 PSLTTAELVD--TSAEIVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRTLLKR 242
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 243 LHDEM-GLPVIILTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKY-K 300
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L + +K+EL + + ++AE+EA +G + KY+
Sbjct: 301 LPTIPMTESDIKRCYDLQKDPRYESGIWKKELEVFLRLKRKAELEAFAKYGLTNITDKYL 360
Query: 346 AKKI 349
+K+
Sbjct: 361 PQKL 364
>gi|448469585|ref|ZP_21600267.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
gi|445808922|gb|EMA58973.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
Length = 361
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLADQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
FTSQ + N ++D+ + +R + G + G L ++E + I C G
Sbjct: 108 FTSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLEIREQTRRGEREIHCQEDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++E LD D + + VE + RL E+ ++I KG P A
Sbjct: 168 EGGYQIPNNPDMIEFLD--DDIDFALAVETGGMRDRLVENGFDEAYNCLVIHLKGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + R++ D+PI D +P I + +GSI + Y +++G++
Sbjct: 226 TRRITKRVHDEL-DVPIAVFADGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQP 284
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
+D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 285 EDI-VEYDLPADPLSDSDVNALESELDDPRFQTDYWEEQIELQLDIGKKSEQQSLASRGL 343
Query: 339 DYL 341
D++
Sbjct: 344 DFV 346
>gi|222479740|ref|YP_002565977.1| DNA topoisomerase VI subunit A [Halorubrum lacusprofundi ATCC
49239]
gi|222452642|gb|ACM56907.1| Spo11/DNA topoisomerase VI subunit A domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 361
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L +++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLADQLDEDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F SQ + N ++D+ + +R + G + G L+++E + I C G
Sbjct: 108 FKSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLLIREQTRRGEREIHCQEDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
+ GY I + ++E LD D + + VE + RL E+ ++I KG P A
Sbjct: 168 TGGYQIPNNPDMIEFLD--DDIDFALAVETGGMRDRLVENGFDEAYNCLVIHLKGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + R++ D+P+ D +P I + +GSI + Y +++G++
Sbjct: 226 TRRITKRVHDEL-DVPVAVFADGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQP 284
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
+D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 285 EDI-VEYDLPADPLADSDINALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASRGL 343
Query: 339 DYL 341
D++
Sbjct: 344 DFV 346
>gi|355570752|ref|ZP_09042022.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
gi|354826034|gb|EHF10250.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
Length = 351
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 16/279 (5%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVA 141
L + + T REL+Y F++Q + N I+D+ L R + + G +
Sbjct: 72 LRENRSSTLRELYYISEGWKKAKFSAQDESNYLIEDLEILTDLQREAFHLRPEEDGATIF 131
Query: 142 GRLMLQE---PNQEVIDC-SACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G L L+E + +I C G +GY I ++ +E LD DA +I +E ++ RL
Sbjct: 132 GPLRLKEMTRRGERIIHCRDDVGEAGYQIPCNVENVELLD--HDASCVIAIETGGMYARL 189
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ + +IL+ KG P +TR +LHRL+ F +LP+ D +P I + +G
Sbjct: 190 IENGFDEEYRAILVHLKGQPARSTRRMLHRLSDEF-NLPVYVFTDGDPWSYRIYASVAYG 248
Query: 258 SIGMG-MEAYRYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRDLQIARSLMSSEILQENY 314
+I M +++G++ D++ +P + L +D+ +S ++ +Y
Sbjct: 249 AIKSAHMSELLATPKAQFIGVQPSDIRDYNLPADA---LTEKDIAALQSELTDPRFGSSY 305
Query: 315 -KEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQ 351
KE++ L + ++E +A G D++ + Y+ +++ +
Sbjct: 306 WKEQIQLQLALNLKSEQQAFAARGLDFVTREYLPRRLSE 344
>gi|397618186|gb|EJK64792.1| hypothetical protein THAOC_14439 [Thalassiosira oceanica]
Length = 138
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 235 LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLL 291
+P+LALVD +P GL IL + GS M ++ ++KWLGLR D+ +P+Q L
Sbjct: 12 IPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLNRYDLPDQCRL 71
Query: 292 PLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLG-KYIAKK 348
+ D++ + L+ + +N + +EL +MV ++AE++AL G+ Y+ +Y+ +K
Sbjct: 72 KMTENDIKTGKELLQEAFIAKNPLWMKELQIMVKTKEKAEIQALSSFGFQYITEEYLPRK 131
Query: 349 IVQADYI 355
+ + D+I
Sbjct: 132 LREGDWI 138
>gi|429328614|gb|AFZ80374.1| hypothetical protein BEWA_032270 [Babesia equi]
Length = 223
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
G +I+ D+ L K +LK A +++VVEK+ +F L ++ ++P ILIT G+P TR
Sbjct: 23 GVNITYDM-LSFKANLK--ANHVLVVEKYTVFMSLCHSRIWKKLPIILITGCGFPSNNTR 79
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAY--------RYACNVKW 274
L+ L+ D+ I L D++P G I ++ GS+ + + R KW
Sbjct: 80 KLVEDLSMN-SDIEICYLGDYDPHGFLIFLSYAKGSVSTRINSLIPDVHINRRKGNRYKW 138
Query: 275 LGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVH------NGQRA 328
+G+R DV+ + ++ L R+++I +L+S + EN +L+ H Q+
Sbjct: 139 IGIRASDVEEYGIKKVVDLTKREMRILENLISDPEVAEN-----TLLRHEIEQQRTVQKI 193
Query: 329 EVEAL-YFHGYDYLGKYIAKKIVQADYI 355
E+EAL L +Y+ +KI+ ++I
Sbjct: 194 EIEALEESTSTGVLFEYVIRKILSREWI 221
>gi|440463984|gb|ELQ33495.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae Y34]
gi|440484008|gb|ELQ64208.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae P131]
Length = 406
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 213 AKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNV 272
KGYPD++TR L++ L A P +PI +LVD++P G+ ILCT+K+ S + E N+
Sbjct: 216 GKGYPDLSTRNLVYCLREARPRIPIYSLVDYDPDGIRILCTYKYSSSALEHERQSAVSNI 275
Query: 273 KWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEI 309
+W+G+R D++ E L P LQ A S +++EI
Sbjct: 276 QWIGIRLSDIK---EHHLRPCNS-VLQDAGSPVNTEI 308
>gi|134078477|emb|CAL00340.1| unnamed protein product [Aspergillus niger]
Length = 388
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 45/294 (15%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALL 123
N A F +V+ + + V++R+++Y P F SQ V+ + D+ +
Sbjct: 92 NEALKFTAALRVLAAIAEAVQAGLVVSKRDIYYS----DPICFGSQKTVDTLVDDLAHTM 147
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSAC--------GSSGYSISGDLSLLEK 175
R +L + A+++GLV G + + V+D SS Y I
Sbjct: 148 GVDRAALYVGAAAKGLVVGYYQMTTTSAGVVDARLSNQAVYRRLASSNYHIRSAAGKGVL 207
Query: 176 LDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL---NRAF 232
+ + D I E + FQ KGYPD++TR + +L +
Sbjct: 208 VTVSADTP-ITFXETYQPFQ-----------------GKGYPDLSTRAFVRKLFDHSHQL 249
Query: 233 PDLP-ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV----QLIP 286
P ALVD +P G+AI+ T+K+GS+ E + WLGLR +V +
Sbjct: 250 TKKPQFYALVDGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLAEVVAGADPLG 309
Query: 287 EQSLLPLKPRDLQIARSLMSSEILQE------NYKEELSLMVHNGQRAEVEALY 334
+ +LL L RD + A ++S + E ++ EL M+ +AE+E LY
Sbjct: 310 DGTLLHLTKRDRKKAIDMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEILY 363
>gi|452210942|ref|YP_007491056.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
gi|452100844|gb|AGF97784.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
Length = 369
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 22/293 (7%)
Query: 65 AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEY--FTSQLQVNRT 115
+AK +++++T + + L++ + T REL+Y + + +Y F Q++ +R
Sbjct: 68 SAKTVKGAFQLLKTTYATDFLINEHLARNRGSTLRELYY--ISEGWDYAKFKEQVESDRL 125
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVA-GRLMLQEP---NQEVIDCSA-CGSSGYSISGDL 170
I+D+ L R + G G + + E + I C G GY I ++
Sbjct: 126 IEDLEILTSLQREYFHMRPEEDGATMFGPIEITEQTKRGERNIHCQKDVGEGGYQIPFNV 185
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
+E K DA II +E ++ RL E+ +IL+ KG P +TR ++ R+N
Sbjct: 186 ENIEFQ--KHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNE 243
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQS 289
+P+ D +P I + +G+I + + K+LGL+ D+ + E S
Sbjct: 244 EL-GIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDI-VEYELS 301
Query: 290 LLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
L +D+ RS +S + +Y KE++ L + G++AE +A G D++
Sbjct: 302 TDKLTEQDVSALRSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFV 354
>gi|313234274|emb|CBY10341.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F+ ++ V T +++ + T+R L+Y F Q V++ ++ +L R
Sbjct: 8 FLALYTVGITVHRLIRENASSTKRGLYYM----HAGLFQDQKIVDKAADELAYILSVFRP 63
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
L + +++G G L L C+ G I DLS + ++ ++++V+
Sbjct: 64 DLRLHQAAKGEAQGHLHLP-------GCNFACEQGGQIPADLSEINFSGVQL-PQFVLVL 115
Query: 189 EKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGL 248
EK AI+QRL E+ +L+T +G PD ATR LL RL+++ +P LVD +P GL
Sbjct: 116 EKFAIYQRLVEEGFCASRNCLLVTGRGMPDRATRALLARLDQS--GVPCYILVDGDPCGL 173
Query: 249 AILCTFKFGS 258
I T++ GS
Sbjct: 174 DIFLTYRLGS 183
>gi|73670271|ref|YP_306286.1| DNA topoisomerase VI subunit A [Methanosarcina barkeri str. Fusaro]
gi|121731963|sp|Q468I6.1|TOP6A_METBF RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|72397433|gb|AAZ71706.1| type II DNA topoisomerase VI, subunit A [Methanosarcina barkeri
str. Fusaro]
Length = 369
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 65 AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
+AK +++++T + + L+Q + T REL+Y F Q + +R I+
Sbjct: 68 SAKTVKGAFQLLKTTYATEFLINEHLAQSRGSTLRELYYISEGWEAAKFKEQAESDRLIE 127
Query: 118 DVIALLHCSRFSLGIVASSRGLVA-GRLMLQEP---NQEVIDCSA-CGSSGYSISGDLSL 172
D+ L + R + G G + + E + I C G GY I ++
Sbjct: 128 DLELLTNLQREYFHMRPEEDGATMFGPIEITEQTNRGERNIHCQKDVGEGGYQIPFNV-- 185
Query: 173 LEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
E ++ K DA II +E ++ RL E+ +IL+ KG P +TR ++ R+N
Sbjct: 186 -ENIEFKAHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEE 244
Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSL 290
+P+ D +P I + +G+I + + K+LGL+ D+ + E S
Sbjct: 245 L-GIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDI-VEYELST 302
Query: 291 LPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
L +D+ RS +S + +Y KE++ L + G++AE +A G +++
Sbjct: 303 DKLTEQDINALRSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLNFV 354
>gi|407463038|ref|YP_006774355.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046660|gb|AFS81413.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
Length = 370
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 10/304 (3%)
Query: 51 LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
L +S RS S ++F ++ + ++ ++K T R+++Y + E F Q
Sbjct: 66 LGNSNALRSAKNSAQLRSFTQLMWLAFFANRLTQEKKSSTLRDVYYSSQAFAIE-FEDQS 124
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE--PNQEVIDCSACGS-SGYSIS 167
+ + I D+ A+ R I R + G L ++ P E + GYSI
Sbjct: 125 ESDNIIVDLEAVTSRPREDFHIFPEERSSIFGDLNIEYTIPGYEGKKMNLSNHPDGYSIG 184
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
L+ E +D T A +I +EK +F R E+ + + SI+I G +TR LL R
Sbjct: 185 PSLTTAELVD--TSAEIVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKR 242
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPE 287
L+ LP++ L D + G I K GS + KW+G+ D++ +
Sbjct: 243 LHDEL-GLPVIILTDGDVYGEHIAMVIKSGSANAAHLRELTVPDAKWVGVWATDIEKY-K 300
Query: 288 QSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEALYFHG-YDYLGKYI 345
+P+ D++ L + +K+EL + + ++AE+EA +G + KY+
Sbjct: 301 LPTIPMTESDIKRCYDLQKDPRYESGIWKKELEVFLRLKRKAELEAFAKYGLTNITDKYL 360
Query: 346 AKKI 349
+K+
Sbjct: 361 PQKL 364
>gi|326468722|gb|EGD92731.1| hypothetical protein TESG_00300 [Trichophyton tonsurans CBS 112818]
Length = 303
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 75/333 (22%)
Query: 29 INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKR 88
+ R+S++S + + T L S R+ T S K W+ F+ +
Sbjct: 1 MKRRSNHSGYNLNIKTGA----LESSDEVRTYTYSWPGKTAQEGWR-----FEAIKGGFI 51
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
++R++FY+ P YF SQ V+R I D+ L R +L + A+++G G +
Sbjct: 52 SSKRDIFYQ----DPVYFGSQRLVDRYIDDIAFTLDVDRAALHVAAAAKGATGGNFSITL 107
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS 208
N I AC A+F RL N +
Sbjct: 108 KNGSSIQVGAC------------------------------TEAVFHRLITSGYHNASAA 137
Query: 209 ---ILITAKGYPDIATRFLLHRLNR---------AFPDLPILALVDWNPAGLAILCTFKF 256
IL+T KGYPD+++R L L+R + P PI LVD +P G+AI+ T+K+
Sbjct: 138 GSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMISSPP-PIFILVDSDPDGMAIMSTYKY 196
Query: 257 GSIGMGMEAYRYA----CNVKWLGLRGDDVQLIPEQ----SLLPLKPRDLQIARSLM--- 305
GS+ + +R A +++W+GL+ ++ SL+P+ RD + A +++
Sbjct: 197 GSMA---QVHRNADLNMPSIQWVGLQASEMMSATNHTDMSSLVPMSQRDRKKAEAMLKRN 253
Query: 306 ---SSEILQENYKEEL-SLMVHNGQRAEVEALY 334
+ + + +++EL SL+V N +AE+E LY
Sbjct: 254 PSFAEDGPEPTWRKELQSLLVMN-LKAELEILY 285
>gi|67476294|ref|XP_653750.1| topoisomerase [Entamoeba histolytica HM-1:IMSS]
gi|56470731|gb|EAL48364.1| topoisomerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705811|gb|EMD45783.1| topoisomerase, putative [Entamoeba histolytica KU27]
Length = 340
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 31/279 (11%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K + + ++ T +++ K+ T REL+Y F Q ++ I DV L +
Sbjct: 49 KKYFKFLVILSTIHELILSNKQFTVRELYYT----HKTIFKDQTELENLIGDVKLLFGVN 104
Query: 127 RFS-LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE---KLDLKTDA 182
+ L + + RG++ G + L P V+D ++ L +L + + +
Sbjct: 105 DLNVLHLTHTPRGILYGEVTLVTPIY-VMD--------FTKKLQLPILSSPFQFIIPSQR 155
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
++++VEK A F+RL + + +Q P I++ ++G+PD +T + H L + P++ LVD
Sbjct: 156 CFLLIVEKEAFFERLIQSHLIDQFPCIILCSRGFPDNSTFTIAHHLTQK-PNIIPCCLVD 214
Query: 243 WNPAGLAILCTFKFGS------IGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPR 296
+ G+ I TF G G + ++W LR D + + PL R
Sbjct: 215 GDVYGIEIFLTFLCGGWKKNRLSGTSKPSDDGISLLRWSLLRPSDY-----KGVSPLTNR 269
Query: 297 DLQIARSLMSSEILQENYKEELSL--MVHNGQRAEVEAL 333
+ IA ++ SE+++ N + EL + ++ N + E++ L
Sbjct: 270 EKIIASHMLESEVVKYNQEIELEIKTLLKNNTKMELDEL 308
>gi|294655376|ref|XP_457515.2| DEHA2B13112p [Debaryomyces hansenii CBS767]
gi|199429911|emb|CAG85521.2| DEHA2B13112p [Debaryomyces hansenii CBS767]
Length = 335
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 21/198 (10%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH- 124
A+ F V KV++T L Q++ T+R+++Y+ D + SQ N I+ ++ L
Sbjct: 60 ARRFAAVIKVLKTMIVNLVQDRTTTKRDVYYQ---DVGLFQKSQPFANELIECIVGSLGM 116
Query: 125 CSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL----EKLDLKT 180
C+ L I AS +GL+ G + + +G + D +L L+
Sbjct: 117 CAERDLKIFASQKGLMFGNMRFRR-------------AGVAWDLDEPVLIPRTNDLEAME 163
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
+ I+V+EK AIF+ + + I +T KG+PD T+ + L + +PD+PILA
Sbjct: 164 PPKGIVVIEKEAIFKSFCKYIQNIDVNLIAVTGKGFPDNLTKRFVGNLGQLYPDVPILAF 223
Query: 241 VDWNPAGLAILCTFKFGS 258
+D + GL+I +K+
Sbjct: 224 MDSDVYGLSICKNYKYAK 241
>gi|327401250|ref|YP_004342089.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
gi|327316758|gb|AEA47374.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
Length = 380
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W++ RS A +R+ V+ + L+ K T REL+Y F
Sbjct: 70 WVYGDRR-SVRSAKTVKGAYMLLRMAYVIGFLKEQLNANKSSTLRELYYISENWGMAKFN 128
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSAC----GSS 162
Q + +R ++D+ L R I G V G L ++E + + C G
Sbjct: 129 EQQESDRLVEDLEILTAFQREHFHIRPEEDGATVIGPLRIREETRRGMREIHCQDDVGEG 188
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
GY I ++ +E +D DA+++I +E + RL E+ + +I++ KG P +TR
Sbjct: 189 GYQIPVNVDKIEFVD--HDAKFVIAIETGGMRDRLVENGFDEKFDAIIVHLKGQPARSTR 246
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDD 281
LL RLN LP++ D +P I + +GSI + Y K++G+R D
Sbjct: 247 RLLRRLNTEL-GLPVVVFTDGDPWSYRIYASVAYGSIKSAHLSEYLATPAAKFVGIRPSD 305
Query: 282 VQLIPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDY 340
+ + E L +D++ +++ E +K+E++L + G+++E +AL +G DY
Sbjct: 306 I-VKYELPSDKLTDQDIKALNAILQDPRFNTEFWKKEVTLQLELGKKSEQQALAKYGLDY 364
Query: 341 L 341
+
Sbjct: 365 V 365
>gi|448473864|ref|ZP_21601925.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
gi|445818443|gb|EMA68300.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
Length = 361
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 14/303 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLANQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F SQ + N ++D+ + +R + G + G L+++E + I C G
Sbjct: 108 FGSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLLIREQTRRGEREIHCQEDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
+ GY I + ++E LD D + + VE + RL E+ ++I KG P A
Sbjct: 168 AGGYQIPNNPDMIEFLD--DDIDFALAVETGGMRDRLVENGFDEDYNCLVIHLKGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + R++ D+PI D +P I + +GSI + Y +++G++
Sbjct: 226 TRRITKRVHDEL-DVPIAVFADGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQP 284
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + + PL D+ S + Q +Y +E++ L + G+++E ++L G
Sbjct: 285 ADI-VEYDLPADPLSDSDVNALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASRGL 343
Query: 339 DYL 341
D++
Sbjct: 344 DFV 346
>gi|326435144|gb|EGD80714.1| hypothetical protein PTSG_01304 [Salpingoeca sp. ATCC 50818]
Length = 435
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
++ + L L A +VVEK AI Q+L + +LIT KG+P + TR+ + +
Sbjct: 244 AITDDLRLHVTATCALVVEKDAILQQLVDCNFAETHNCLLITGKGFPGVDTRYFVRLVAE 303
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDD-----VQL 284
+P+ +VD + GL ILCT+ +GS + + + A +++WLG+ D V L
Sbjct: 304 ---QVPVYVVVDADAHGLEILCTYAYGSQSLAFQNHELAVPHIRWLGVFPSDLTEFNVAL 360
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
P+ + R+ ++ +L E L + +EEL L+ +AE+E L
Sbjct: 361 HPQSR---MSDREYRLLEALSEREHLPQQMREELLLLQRMEHKAEIEIL 406
>gi|307354510|ref|YP_003895561.1| DNA topoisomerase [Methanoplanus petrolearius DSM 11571]
gi|307157743|gb|ADN37123.1| DNA topoisomerase (ATP-hydrolyzing) [Methanoplanus petrolearius DSM
11571]
Length = 357
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 135/296 (45%), Gaps = 13/296 (4%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
TR+ + + +A +++ V+ + + + T RE++Y F +Q + N
Sbjct: 54 TTRTASTAKSALHLLKMAYVVGFLKDQIGENRSSTLREMYYISEGWKRAKFGAQDESNFL 113
Query: 116 IQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQ---EVIDC-SACGSSGYSISGDL 170
++D+ + SR + + G + G + ++E + + I C G +GYSI ++
Sbjct: 114 VEDLEIITELSREAFHLRPEEDGASIFGPIKIREQTRRGDKDIHCVEDVGEAGYSIPNNV 173
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
L L+ DA+++I +E ++ RL E+ + ++L+ KG P +TR +L RLN
Sbjct: 174 ERLTFLE--NDAKFVIAMETGGMYARLMENGFSEEYDAVLLHLKGQPARSTRRMLKRLNN 231
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQL--IPE 287
LP++ D +P I + +GSI M +++G++ D+ + +P
Sbjct: 232 EL-GLPVVVFTDGDPWSYRIFASIAYGSIKAAHMSDILVTPGAQFVGVQPSDISMYNLPS 290
Query: 288 QSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK 343
L L+ L E ++ +++L + G ++E +A G D++ K
Sbjct: 291 DHLTEGDIAALKA--ELTDPRFDTEYWRNQINLQIKLGLKSEQQAFAARGLDFVTK 344
>gi|21228520|ref|NP_634442.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Go1]
gi|34395891|sp|Q8PUB7.1|TOP6A_METMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|152149434|pdb|2Q2E|A Chain A, Crystal Structure Of The Topoisomerase Vi Holoenzyme From
Methanosarcina Mazei
gi|20907006|gb|AAM32114.1| Type II DNA topoisomerase VI, subunit A [Methanosarcina mazei Go1]
Length = 369
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 65 AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEY--FTSQLQVNRT 115
+AK +++++T + + L++ + T REL+Y + + +Y F Q + +R
Sbjct: 68 SAKTVKGAFQLLKTTYATDFLINEHLARNRGSTLRELYY--ISEGWDYAKFKEQGESDRL 125
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVA-GRLMLQEP---NQEVIDCSA-CGSSGYSISGDL 170
I+D+ L R + G G + + E + I C G GY I ++
Sbjct: 126 IEDLEILTSLQREYFHMRPEEDGATMFGPIEITEQTKRGERNIHCQKDVGEGGYQIPFNV 185
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
+E K DA II +E ++ RL E+ +IL+ KG P +TR ++ R+N
Sbjct: 186 ENIEFQ--KHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNE 243
Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQS 289
+P+ D +P I + +G+I + + K+LGL+ D+ + E S
Sbjct: 244 EL-GIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDI-VEYELS 301
Query: 290 LLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
L +D+ RS +S + +Y KE++ L + G++AE +A G D++
Sbjct: 302 TDKLTEQDVSALRSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFV 354
>gi|118575978|ref|YP_875721.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
gi|118194499|gb|ABK77417.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
Length = 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
++ ++K T R+++Y + + F Q + + I D+ A+L R + R V
Sbjct: 32 RLTREKKSSTLRDVYYSSQAFAVD-FEDQSESDSIIVDLEAVLAKPREDFHVFPEERSSV 90
Query: 141 AGRLMLQE--PNQEVIDCSACG-SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G L ++ P E + GY+I L+ E + T A +I +EK +F R
Sbjct: 91 FGDLDIEYTVPGYEGKRMNLSNHPDGYAIGPSLTSAELV--STSAEIVIAIEKGGLFTRF 148
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ V + SI++ G +TR LL RLN LP++ L D + G I K G
Sbjct: 149 VEEQVDKKFKSIIVDTGGQAPRSTRTLLKRLNSEL-GLPVVILTDGDVYGEHIAMVIKSG 207
Query: 258 SIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQEN-YKE 316
S G + KW+G+ D++ + +P+ D++ L QE +++
Sbjct: 208 SAGAAHLRELTVPDAKWVGVWATDIEKY-KLPTIPMTESDIKRCHDLKRDPRYQEGIWRK 266
Query: 317 ELSLMVHNGQRAEVEALYFHG-YDYLGKYIAKKI 349
EL + ++AE+EA +G + KY+ +K+
Sbjct: 267 ELEAFLRIKRKAELEAFSKYGLTNITDKYLPQKL 300
>gi|407043152|gb|EKE41773.1| topoisomerase, putative [Entamoeba nuttalli P19]
Length = 340
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K + + ++ T +++ K+ T REL+Y F Q ++ I D+ L +
Sbjct: 49 KKYFKFLVILSTIHELILANKQFTVRELYYT----HKAIFKDQTELENLIGDIKLLFGVN 104
Query: 127 RFS-LGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE---KLDLKTDA 182
+ L + + RG++ G + L P V+D ++ L +L + +
Sbjct: 105 DLNVLHLTHTPRGILYGEVTLVTP-LYVMD--------FTKKLQLPILSSPFQFITPSQR 155
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
++++VEK A F+RL + + +Q P I++ ++G+PD +T + H L + +P LVD
Sbjct: 156 CFLLIVEKEAFFERLIQSHLIDQFPCIILCSRGFPDNSTFTIAHHLTQKSNIIPC-CLVD 214
Query: 243 WNPAGLAILCTFKFGS------IGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPR 296
+ G+ I TF G G ++ ++W LR D + + PL R
Sbjct: 215 GDVYGIEIFLTFLCGGWKKNRLSGTSKQSDDGISLLRWSLLRPSDYKGVS-----PLTSR 269
Query: 297 DLQIARSLMSSEILQENYKEELSL--MVHNGQRAEVEAL 333
+ IA ++ SE+++ N + EL + ++ N + E++ L
Sbjct: 270 EKIIASHMLESEVVKYNQEIELEIKTLLKNNTKMELDEL 308
>gi|110668560|ref|YP_658371.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|385804025|ref|YP_005840425.1| DNA topoisomerase VI subunit A (type II DNA topoisomerase)
[Haloquadratum walsbyi C23]
gi|109626307|emb|CAJ52765.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|339729517|emb|CCC40780.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi C23]
Length = 364
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 15/312 (4%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY-KLLCDSPE-Y 105
W++ + TRS A+ ++ +E L +++ T REL+Y D+ E
Sbjct: 52 WVYGDRT-STRSANSVRGARKLLKAAYTIEFLVDQLEEDRSSTLRELYYLSESWDNKEAQ 110
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPN---QEVIDCSA-CG 160
F+ Q + N+ ++D+ + +R + G + G L L+E + I C G
Sbjct: 111 FSDQDESNQLVEDLEIVSKVTREDFHMRPEESGATLMGPLELREQTRRGERAIHCQEDVG 170
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
GY I + ++ LD D +++ VE + RL E+ + +++ KG P A
Sbjct: 171 EGGYQIPNNPDTIDFLDHDID--FVLCVETGGMRDRLIENGFDDMYNCLIVHLKGQPARA 228
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + RL+ +P++ D +P I + +GSI + Y +++G++
Sbjct: 229 TRRITKRLHDELS-VPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFIGIQP 287
Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
D+ + E PL D+ S + Q Y E++ L + ++AE ++L G
Sbjct: 288 TDI-VEYELPTDPLADSDVNALESELEDPRFQSEYWTEQIELQLDIEKKAEQQSLASRGL 346
Query: 339 DYLGK-YIAKKI 349
D++ + Y+ +++
Sbjct: 347 DFVTETYLPERL 358
>gi|388855589|emb|CCF50812.1| related to meiotic recombination protein SPO11 [Ustilago hordei]
Length = 375
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 53/281 (18%)
Query: 100 CDSPEYFTSQLQVNRTIQDVIALLHCS-RFSLGIVASSRGLVAGRLMLQEPN-QEVIDCS 157
C F SQ +R I V ALL C+ R L IVAS RGL +G L L P+ Q ++ C
Sbjct: 110 CPEARLFPSQQSSDRIIDQVCALLGCADRSELAIVASPRGLFSGSLTLSPPSGQGIVQC- 168
Query: 158 ACGSSGYSISGDLSLLE-KLDLKT---------DARYII-----VVEKHAIFQRLTEDFV 202
SG +L+ +++ +T + + I VVEK A+F+ L +
Sbjct: 169 --------FSGLPTLIPTEINAETWRATIPCTHETEFCIGHVVVVVEKEAVFKHLIQHPT 220
Query: 203 FNQIPSILITAKGYPDIATRFLLHRLNRAFP-----DLPILALVDWNPAGLAILCTFKFG 257
+ +++T KGYPD ATR L+ L + ++ + D +P G+ I
Sbjct: 221 VAR-QWVVVTGKGYPDHATRALIQILGAELECEKGGGVRMVGVFDCDPYGIDI------- 272
Query: 258 SIGMGMEAYRYAC-NVKWLGLRGDD--VQLIPEQS--LLPL----KPRDLQIARSLMSSE 308
Y C V+W+G+ DD Q EQ+ L+ L + + +++ R+LM +
Sbjct: 273 -----HRQYVQVCGGVEWVGVELDDFLAQNDSEQASQLVQLRADERAKAVRMLRTLMGTS 327
Query: 309 ILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKI 349
+E ++ +L+ M+ G + E+EA Y L Y+ K+
Sbjct: 328 ADEELWRTKLTNMLLTGYKVEIEAAYTFAVGGLVGYLQHKL 368
>gi|190345758|gb|EDK37695.2| hypothetical protein PGUG_01793 [Meyerozyma guilliermondii ATCC
6260]
Length = 315
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA--LL 123
A+ F KV++ L + ++R+++YK D Y SQ + TI D IA L
Sbjct: 4 ARKFAAYLKVIKAMIDNLQSARFTSKRDIYYK---DVSTYKKSQRYCD-TIIDSIATSLG 59
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD------ 177
C L I S +GL+ G L +Q V +C++ L+ D
Sbjct: 60 MCLEVDLRIFPSRKGLIYGSLKTHTGDQ-VFECNSTKVP--------CLIPNFDSERSTV 110
Query: 178 LKTDARYIIVVEKHAIFQRLTEDF--VFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL 235
+ + +I+VEK A+F L + + N ++IT KG PDI T+ + L++++P
Sbjct: 111 MSAAPKVVILVEKDAVFSTLCDHLRTISNPKDLLVITGKGNPDILTKKFVELLSKSWPTT 170
Query: 236 PILALVDWNPAGLAILCTFKFGS 258
P L VD + GL+I +KFGS
Sbjct: 171 PFLGFVDSDVFGLSIFRAYKFGS 193
>gi|34395897|sp|Q8TQF8.2|TOP6A_METAC RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 373
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 24/294 (8%)
Query: 65 AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEY--FTSQLQVNRT 115
+AK +++++T + + L+ + T REL+Y + + +Y F Q + +R
Sbjct: 72 SAKTVKGAFQLLKTTYATDFLINEHLAHNRGSTLRELYY--ISEGWDYAKFKEQAESDRL 129
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVA-GRLMLQEPNQEV---IDCSA-CGSSGYSISGDL 170
I+D+ L R + G G + + E + I C G GY I ++
Sbjct: 130 IEDLELLTSLQREYFHMRPEEDGATMFGPIEISELTKRGARNIHCQKDVGEGGYQIPFNV 189
Query: 171 SLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
E ++ K DA II +E ++ RL E+ +IL+ KG P +TR ++ R+N
Sbjct: 190 ---ENIEFKNHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMN 246
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQ 288
++P+ D +P I + +G+I + + ++LGL+ D+ + E
Sbjct: 247 EEL-EIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAARFLGLQPSDI-VEYEL 304
Query: 289 SLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
S L +D+ RS +S + Y KE++ L + G++AE +A G D++
Sbjct: 305 STDKLTEQDISALRSELSDPRFESEYWKEQIQLQLDIGKKAEQQAFAGKGLDFV 358
>gi|315425013|dbj|BAJ46687.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|315426694|dbj|BAJ48319.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|343485466|dbj|BAJ51120.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
Length = 365
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 18/280 (6%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
Q++ K T R+ FY L + F Q + + + ++ ++ R I R V
Sbjct: 91 QLIRSRKTSTLRDAFYNALGYDVD-FEDQQESDEAVTELETIIGTVREDFNIYPEERSSV 149
Query: 141 AGRLMLQE--PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLT 198
G L ++ P E ++ G K +K+ A+ + VVEK AI+QR
Sbjct: 150 FGPLTIEYDVPGYEGRRLDLTTIPDGAMIGPAMTTAKF-VKSSAKQVFVVEKGAIYQRFL 208
Query: 199 EDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGS 258
E+ V ++ +I++ G ATR + RLN LP+ D +P G+ I FGS
Sbjct: 209 EENVPSKYKAIVVHTAGQAPRATRKFIRRLNTEL-GLPVYIFTDADPWGMHIASVIVFGS 267
Query: 259 IGMGMEAYRYACNVK---WLGLRGDDVQLIPEQSLLPLKPRDLQIARSL---MSSEILQE 312
+ A+ NV W GL D I + L +K D I R + +
Sbjct: 268 ---ALSAHVRELNVPDAVWAGLWASD---ITKYKLPAMKFNDEDIRRVAELEKDPRYVSD 321
Query: 313 NYKEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQ 351
+K E+S ++AE+EAL +G +Y+ Y+ +K+ +
Sbjct: 322 PWKREISNFKKLQKKAELEALSRYGLEYIVSDYLPEKLAE 361
>gi|397618187|gb|EJK64793.1| hypothetical protein THAOC_14440 [Thalassiosira oceanica]
Length = 318
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 13/173 (7%)
Query: 25 DLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILS 84
D+P +R +SN Q + ++ I L TRS ++ +V++ +L
Sbjct: 155 DIP--SRAASN----QIYVPELDRIVLGDKRGTRSFLNVKESRKAAITTRVLQLLHAVLQ 208
Query: 85 QEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL 144
+ +T+R+LFY + + F Q + + DV ++ C+R +L +VAS +GLV G++
Sbjct: 209 KRIHITKRDLFYTDV----KLFVDQSDSDGVLDDVATMIGCTRSNLHVVASDKGLVVGKI 264
Query: 145 MLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
E + + IDC+ G G +I + +E ++++DA +I++VEK A + R+
Sbjct: 265 SFYE-DGDFIDCTKMGVGGKAIPPYIDKIE--NVQSDAEFILLVEKEAAYMRM 314
>gi|20090444|ref|NP_616519.1| DNA topoisomerase VI subunit A [Methanosarcina acetivorans C2A]
gi|19915459|gb|AAM04999.1| DNA topoisomerase subunit A [Methanosarcina acetivorans C2A]
Length = 393
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 24/294 (8%)
Query: 65 AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEY--FTSQLQVNRT 115
+AK +++++T + + L+ + T REL+Y + + +Y F Q + +R
Sbjct: 92 SAKTVKGAFQLLKTTYATDFLINEHLAHNRGSTLRELYY--ISEGWDYAKFKEQAESDRL 149
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVA-GRLMLQEPNQEV---IDCSA-CGSSGYSISGDL 170
I+D+ L R + G G + + E + I C G GY I ++
Sbjct: 150 IEDLELLTSLQREYFHMRPEEDGATMFGPIEISELTKRGARNIHCQKDVGEGGYQIPFNV 209
Query: 171 SLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
E ++ K DA II +E ++ RL E+ +IL+ KG P +TR ++ R+N
Sbjct: 210 ---ENIEFKNHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMN 266
Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQ 288
++P+ D +P I + +G+I + + ++LGL+ D+ + E
Sbjct: 267 EEL-EIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAARFLGLQPSDI-VEYEL 324
Query: 289 SLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
S L +D+ RS +S + Y KE++ L + G++AE +A G D++
Sbjct: 325 STDKLTEQDISALRSELSDPRFESEYWKEQIQLQLDIGKKAEQQAFAGKGLDFV 378
>gi|284162141|ref|YP_003400764.1| DNA topoisomerase [Archaeoglobus profundus DSM 5631]
gi|284012138|gb|ADB58091.1| DNA topoisomerase (ATP-hydrolyzing) [Archaeoglobus profundus DSM
5631]
Length = 357
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 18/304 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W++ RS A +R+ V+ + LSQ + T REL+Y F
Sbjct: 45 WVY-GDKKSVRSAKSVKGAYQLLRMVYVIGFLKEQLSQNRSSTLRELYYISENWGIAKFN 103
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDC-SACGSS 162
Q++ +R I+D+ L R S + G V G + ++E + VI C G +
Sbjct: 104 EQMESDRLIEDLEILTGLQRESFNVRPEEDGATVFGDIKIREKTRRGERVIHCQDDVGEA 163
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
GY I ++ +E L+ D ++I +E + RL E+ +I++ KG P +TR
Sbjct: 164 GYQIPTNVDNIEFLECNAD--FVIAIETGGMRDRLVENGFDEDYNAIIVHLKGQPARSTR 221
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDD 281
LL RLN LP++ D +P I + +GSI + Y + ++G+R D
Sbjct: 222 RLLRRLNTEL-GLPVVVFTDGDPWSYRIYASVAYGSIKSAHLSEYLATPSAMFVGIRPSD 280
Query: 282 VQLIPEQSLLP---LKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHG 337
+ + LP L D++ +++S ++ + E+ L + G+++E +AL +G
Sbjct: 281 IL----KYKLPSDKLTDEDIKALNAILSDPRFDSDFWRREIKLQLELGRKSEQQALAKYG 336
Query: 338 YDYL 341
++
Sbjct: 337 LSFV 340
>gi|320583531|gb|EFW97744.1| endonuclease Rec12 [Ogataea parapolymorpha DL-1]
Length = 494
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 19/175 (10%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
V++R+++Y+ + F Q +N+ I D+ + S +LG+VA+ +GL+ L
Sbjct: 43 VSKRQIYYRDVT----LFKKQAVINQCIDDIASSFGVSTETLGVVAAQKGLIYANLQYYY 98
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARY-------IIVVEKHAIFQRLTEDF 201
++ V G++ L L+ D R+ II+VEK ++F +L ++
Sbjct: 99 KDKFVKLEKKEGTTL------LPLISLESHHEDFRFVSPCPEEIIIVEKESVFSKLCKEH 152
Query: 202 VFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKF 256
+ ILITAKG+PD T+ L+ L + +P+ ++ALVD + GL IL +K+
Sbjct: 153 --DHGNKILITAKGFPDRLTKRFLYHLTQHYPEAKVVALVDSDVYGLMILKEYKY 205
>gi|401418516|ref|XP_003873749.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489981|emb|CBZ25241.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 652
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 19/135 (14%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
I+VVEKHA+F +L + + +P +L+TA+GYP A R LL L+ A P ++ LVD+N
Sbjct: 307 ILVVEKHAVFSQLLREGLLRLLPCVLLTAQGYPTHAARRLLANLHTALPRAAVVGLVDYN 366
Query: 245 PAGLAILCTFK---------FGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLLPLK 294
P GLAIL ++ FGS ME+ YA ++WLG+R V + E+
Sbjct: 367 PHGLAILAAYRWAATSDAPPFGS--ASMESRYYAVPTLRWLGVRAAHVARVMER------ 418
Query: 295 PRDLQIARSLMSSEI 309
RD AR+ S +
Sbjct: 419 -RDSGGARAEHPSTV 432
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
V+ F+ + + TQR+++Y L+ + +Q VNRT+Q + +L R +G+VA
Sbjct: 139 VLTVLFRNVVRGDVATQRDVYYHLV----RHIQTQEVVNRTVQQLSHVLRLPRQLMGVVA 194
Query: 135 SSRGLVAG 142
RG +AG
Sbjct: 195 GGRGYIAG 202
>gi|159112720|ref|XP_001706588.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia ATCC
50803]
gi|30578215|gb|AAP35104.1|AF485825_1 Spo11 [Giardia intestinalis]
gi|33667822|gb|AAQ24511.1| Spo11 [Giardia intestinalis]
gi|157434686|gb|EDO78914.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia ATCC
50803]
Length = 368
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 15/194 (7%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F R +++ + ++ V R L+Y +P + SQ+Q N I + R
Sbjct: 61 FARALRMIAESACAVVKKTFVNIRSLYYT----APSLYGSQIQSNVLIAEFCFGYSIERE 116
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
+ A+++GL+ G + +V +A IS L+++ TDA++++V+
Sbjct: 117 MMHYRAAAKGLLLGNCTMV---TQVGTVTASSLVAVPISPHFFYLQQI--HTDAQFVLVI 171
Query: 189 EKHAIFQRLTEDF--VFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
EK +F+ L + + + +++ ++IT KGYPD ATR L+ L+ +PI L D +
Sbjct: 172 EKDTVFEHLIDSYEAIKDRLGQSFMVITGKGYPDAATRALVSFLDSC--RIPIFGLADGD 229
Query: 245 PAGLAILCTFKFGS 258
G+ ILCT+ +GS
Sbjct: 230 AHGMNILCTYAYGS 243
>gi|146420331|ref|XP_001486122.1| hypothetical protein PGUG_01793 [Meyerozyma guilliermondii ATCC
6260]
Length = 315
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA--LL 123
A+ F KV++ L + ++R+++YK D Y SQ + TI D IA L
Sbjct: 4 ARKFAAYLKVIKAMIDNLQLARFTSKRDIYYK---DVSTYKKSQRYCD-TIIDSIATSLG 59
Query: 124 HCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD------ 177
C L I S +GL+ G L +Q V +C++ L+ D
Sbjct: 60 MCLEVDLRIFPSRKGLIYGSLKTHTGDQ-VFECNSTKVP--------CLIPNFDSERSTV 110
Query: 178 LKTDARYIIVVEKHAIFQRLTEDF--VFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL 235
+ + +I+VEK A+F L + + N ++IT KG PDI T+ + L++++P
Sbjct: 111 MSAAPKVVILVEKDAVFSTLCDHLRTISNPKDLLVITGKGNPDILTKKFVELLSKSWPTT 170
Query: 236 PILALVDWNPAGLAILCTFKFGS 258
P L VD + GL+I +KFGS
Sbjct: 171 PFLGFVDSDVFGLSIFRAYKFGS 193
>gi|253744228|gb|EET00462.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia intestinalis
ATCC 50581]
Length = 348
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 15/194 (7%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F R +M ++++ + R L+Y +P + SQ Q N I + R
Sbjct: 61 FARALHMMTESASAVAKKTFINIRSLYYT----APSLYGSQTQSNALITEFCLGYGIERE 116
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
+ A+++GL+ G + +V + IS ++++ TDA++ +V+
Sbjct: 117 MMHYRATAKGLLLGNCSVVT---QVGTIAVSTLVAVPISPHFFYIQQI--HTDAQFTLVI 171
Query: 189 EKHAIFQRLTEDF--VFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
EK IF+ L +++ + +++ ++IT KGYPD ATR L+ L+ +PIL L D +
Sbjct: 172 EKDTIFEHLVDNYEAIRDRLGRNFMVITGKGYPDAATRALVSFLDSC--RIPILGLADGD 229
Query: 245 PAGLAILCTFKFGS 258
G+ ILCT+ +GS
Sbjct: 230 AHGMNILCTYAYGS 243
>gi|116753913|ref|YP_843031.1| DNA topoisomerase VI subunit A [Methanosaeta thermophila PT]
gi|116665364|gb|ABK14391.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanosaeta
thermophila PT]
Length = 357
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 14/316 (4%)
Query: 45 DVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF-QILSQEKRVTQRELFYKLLCDSP 103
D W++ RS+ AK ++ +++ + L + T RE++Y
Sbjct: 43 DDVWVYGDQE-SVRSVKTIRGAKTLLKTVHLVDLLVKEHLRGNRASTLREIYYISENWDL 101
Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSAC--- 159
F Q + +R I+D+ + R + G V G L ++E + C
Sbjct: 102 AKFAEQAESDRLIEDLEIITGLQREEFHVRPEEDGAAVFGPLRIRERTRRGEREIHCQED 161
Query: 160 -GSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G +GY I ++ +E L+ DAR +I VE ++ RL E+ + +IL+ KG P
Sbjct: 162 IGEAGYQIPFNVDFVEFLE--HDARMVIAVETGGMYARLIENGFDEEFDAILVHLKGQPA 219
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGL 277
+TR + RLN LP+ D +P I + +G+I + A + ++LG+
Sbjct: 220 RSTRRFIKRLNTEL-GLPVAVFTDGDPWSYRIFASVAYGAIKSAHLSEHLATPDARFLGV 278
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+ D+ + S L RDL R+ ++ +Y + ++ L + ++AE +A
Sbjct: 279 QPTDI-VEYNLSTDKLTDRDLHALRAELTDPRFGSDYWQMQIQLQIDLKKKAEQQAFAGK 337
Query: 337 GYDYLGK-YIAKKIVQ 351
G D++ K Y+ +++ +
Sbjct: 338 GLDFVTKRYLPERLSE 353
>gi|11498545|ref|NP_069773.1| DNA topoisomerase VI subunit A [Archaeoglobus fulgidus DSM 4304]
gi|3122956|sp|O29322.1|TOP6A_ARCFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2649657|gb|AAB90299.1| DNA topoisomerase VI, subunit A (top6A) [Archaeoglobus fulgidus DSM
4304]
Length = 360
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 18/304 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
W++ RS A +++ V+ + L+ K T REL+Y F
Sbjct: 50 WVYGDRK-SVRSAKTVKGAYRILKMTYVIGFLKEQLNLNKSSTLRELYYISEGWGAAKFE 108
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSAC----GSS 162
Q + +R ++D+ L + R I G V G L ++E + + C G
Sbjct: 109 EQPESDRLVEDLEILTNFQREHFHIRPEEDGATVIGPLRVREETRRGVREIHCQDDVGEG 168
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
GY I ++ +E +D DA+++I +E + RL E+ + +I++ KG P +TR
Sbjct: 169 GYQIPVNVDKIEFVD--HDAKFVIAIETGGMRDRLVENGFDEKYDAIIVHLKGQPARSTR 226
Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDD 281
LL RLN +LP++ D +P I + +GSI + Y +++G+R D
Sbjct: 227 RLLRRLNTEL-NLPVVVFTDGDPWSYRIFASVAYGSIKSAHLSEYLATPAAQFVGIRPTD 285
Query: 282 VQLIPEQSLLP---LKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHG 337
+ + LP L D++ ++++ E +K+E++L + +++E +AL +G
Sbjct: 286 IV----KYDLPADKLTEEDIKALNAILTDPRFDSEFWKKEVNLQLEINKKSEQQALAKYG 341
Query: 338 YDYL 341
DY+
Sbjct: 342 LDYV 345
>gi|164426175|ref|XP_961027.2| hypothetical protein NCU01120 [Neurospora crassa OR74A]
gi|157071228|gb|EAA31791.2| hypothetical protein NCU01120 [Neurospora crassa OR74A]
Length = 404
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 50/177 (28%)
Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSIS 167
SQ V+ + ++ L R L IVA+++GLVAG++ L IDC+ SG
Sbjct: 148 SQSVVDDMVDNLAFTLGVGRNDLNIVATAKGLVAGQVELIMRGGSKIDCAESSDSG---- 203
Query: 168 GDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
KGYPD+ATR L
Sbjct: 204 ----------------------------------------------KGYPDLATRKFLAA 217
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL 284
++ P L + ALVD++P G+++L T+++GS + E ++WLG+R DV L
Sbjct: 218 IHSVRPRLLMFALVDFDPHGISVLRTYQYGSQRLDHEERTKVFGLRWLGIRSSDVLL 274
>gi|358392673|gb|EHK42077.1| hypothetical protein TRIATDRAFT_166457, partial [Trichoderma
atroviride IMI 206040]
Length = 375
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ A F R+ +++ L +T+R +FY+ E F SQ V++ + +
Sbjct: 50 AQEATKFARILLILQLAHDALVSGIVLTKRHIFYQ----HQELFCSQRTVDKLVDSLALA 105
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
L R L IVASS+G+ +G L ++ + VI G + L+ D T+
Sbjct: 106 LGIHRDELNIVASSKGVFSGSLSIRLQDDRVI-----GPATGDAVCKLAYTACWDHTTND 160
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
+E + F I +L YPDI T L + P +PI ALVD
Sbjct: 161 WINCHLELRSHSMDPCCGISFFDIFIVLANVSWYPDILTCSFLQLIRVNCPQIPIFALVD 220
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV 282
++P GL I ++F S E A + WLG++ D+
Sbjct: 221 YDPDGLNIFRCYRFRSNTAIQETDVTAPGICWLGIKSQDL 260
>gi|448116869|ref|XP_004203119.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
gi|359383987|emb|CCE78691.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
Length = 364
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S A+ F + K+++ L K+ T+R+++Y+ D + SQ VN + V
Sbjct: 74 SGEARKFATLIKILKVLITNLLTHKQTTKRDIYYQ---DVTLFQKSQTYVNEILDCVSYS 130
Query: 123 LHCS-RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
LH S LGI AS +G++ R+ L E N + + + D+ LL D
Sbjct: 131 LHLSMEDDLGIFASQKGMLFSRIPLAEGNTVLTFDTPTLIPRFH---DIKLLGCPDA--- 184
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
+I++EK AIF+ + + ++IT KG+PD TR + L++ + +L L V
Sbjct: 185 ---VIILEKEAIFKSFCQFVKEKNLNLLVITGKGFPDRLTRNFVAYLSKEYKNLAFLGFV 241
Query: 242 DWNPAGLAILCTFKF 256
D + G+ IL T+K+
Sbjct: 242 DADVYGINILKTYKY 256
>gi|124485244|ref|YP_001029860.1| DNA topoisomerase VI subunit A [Methanocorpusculum labreanum Z]
gi|124362785|gb|ABN06593.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocorpusculum labreanum
Z]
Length = 365
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 23/274 (8%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VA 141
L + + T RE++Y F +Q + N I+D+ + R + G +
Sbjct: 87 LQENRSSTLREMYYISEGWKQAKFGAQNESNYLIEDLEIITALQREFFHMRPEEDGASIF 146
Query: 142 GRLMLQEPNQEVIDCSAC----GSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G + ++E + + C G +GY+I ++ +E +D DA +I +E +F RL
Sbjct: 147 GPIRVRENTRRGMKEIHCQDDVGEAGYNIPNNVENVELVD--HDASCVIAIETGGMFSRL 204
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ + ++L+ KG P ATR +L R+N +P++ D +P I + +G
Sbjct: 205 QENGFDEEYNAVLLHLKGQPARATRRMLKRMNEEL-GIPVVVFTDGDPWSYRIYASVAYG 263
Query: 258 SIGMG-MEAYRYACNVKWLGLRGDDVQL-------IPEQSLLPLKPRDLQIARSLMSSEI 309
SI M + +++G++ D+Q + EQ + LK L
Sbjct: 264 SIKSAHMSELLATPSAQFIGVKPSDIQRYNLPADKLTEQDVSALKA-------ELTDPRF 316
Query: 310 LQENYKEELSLMVHNGQRAEVEALYFHGYDYLGK 343
+ +K+E++L + ++E +A G D++ K
Sbjct: 317 ATDFWKKEINLQLEMNLKSEQQAFASRGLDFVTK 350
>gi|326500312|dbj|BAK06245.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 85 QEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL 144
+ K ++R+++Y P F Q V+R I D+ L CSR +L +V ++GLV G +
Sbjct: 115 ENKHCSKRDIYYMY----PSMFVEQAIVDRAINDICILFKCSRHNLNVVPVAKGLVMGWI 170
Query: 145 MLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFN 204
E ++V C ++ + I + ++ D+ + A YI+VVEK A+FQRL D
Sbjct: 171 RFVEGEKKVY-CITNVNTAFPIPVSIEAIK--DVVSVAHYILVVEKEAVFQRLANDKFCK 227
Query: 205 QIPSILITAK---GYPDIATRFL 224
+ I+IT G I T FL
Sbjct: 228 KNRCIVITVTANAGSSVIVTLFL 250
>gi|70950439|ref|XP_744543.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524539|emb|CAH89172.1| hypothetical protein PC105088.00.0 [Plasmodium chabaudi chabaudi]
Length = 248
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 206 IPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA 265
+P ILIT KG+PD ATR ++ L F L + + D++P G+ I ++K G +
Sbjct: 138 LPLILITGKGFPDYATRKIIFDLVNLF-HLECVYVGDYDPYGIRIYLSYKEGC--KNNQN 194
Query: 266 YRYAC-NVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYK 315
Y C ++KW+G+ +DV P++SLLPL ++ + ++L++ + L N K
Sbjct: 195 AIYPCKDIKWIGMCSEDVNFFPKESLLPLSMKEKHVIQNLLNDKNLYYNSK 245
>gi|378732372|gb|EHY58831.1| hypothetical protein HMPREF1120_06833 [Exophiala dermatitidis
NIH/UT8656]
Length = 372
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 112 VNRTIQDVIALLHCSRFSLGIVASSRGLV----AGRLMLQEPNQEVI--------DCSAC 159
N+ ++D+ + F LG+ S G V +L + E + + S
Sbjct: 33 ANKIMKDIALTIGVHPFLLGVEPESVGQVYIPEGIKLAMMETSSARVYVDKKAKYSTSLN 92
Query: 160 GSSGYSISGDLSLLEKLD-LKTDARYIIVVEKHAI---FQRLTEDFVFNQIPSILITAKG 215
G + I L + K++ + R ++V E +I F + ED F + L+T G
Sbjct: 93 GGKRHQIPRLLVDIAKVNQAEASIRAVVVCEHRSIVEKFPKAFEDARFRGV--FLVTTGG 150
Query: 216 YPDIATRFLLHRL--NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NV 272
YPD+ATR LH L +RAF +P L + D +P G+ I KFGS A + C N+
Sbjct: 151 YPDVATREFLHILARHRAFKTVPFLYISDGDPNGIEIYAVLKFGSKACAFAAPQMTCPNL 210
Query: 273 KWLGL 277
KW GL
Sbjct: 211 KWAGL 215
>gi|401420280|ref|XP_003874629.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490865|emb|CBZ26129.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 493
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 20/147 (13%)
Query: 126 SRFSLGIVASSRGLVAGRLMLQ--EPNQEVIDCSACGSSG----YSISGDLSLLEKLDLK 179
+R SLGI A+ + L+AG + L+ +P E+ID SA GSSG YS++ + + D
Sbjct: 172 TRESLGITAAGKSLLAGAITLELCDPA-ELIDVSARGSSGITLTYSLAARMVGCREADDW 230
Query: 180 TDAR---------YIIVVEK----HAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
AR ++++EK HA+ Q + + + IL+ KGYP +A R LH
Sbjct: 231 QAARDGISLSRSYKLVLIEKESVHHAVLQSIAKSGSPHTYSCILLCTKGYPCVAAREWLH 290
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCT 253
R++ +P L + +VD +P GL I T
Sbjct: 291 RVHALWPALQLYIMVDGDPHGLCIALT 317
>gi|448119321|ref|XP_004203703.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
gi|359384571|emb|CCE78106.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
Length = 364
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
S A+ F + K+++ L K+ T+R+++Y+ D + SQ VN + +
Sbjct: 74 SGEARKFATLIKILKVLITNLLTRKQTTKRDIYYQ---DVALFQKSQTYVNEILDCISYS 130
Query: 123 LHCS-RFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK-- 179
LH S LGI AS +G++ ++ L E G + ++ + D+K
Sbjct: 131 LHLSMEDDLGIFASQKGMLFSQIPLAE-----------GDTVFTFDTPTLIPRFHDIKLL 179
Query: 180 --TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
DA +I++EK AIF+ + + ++IT KG+PD TR + L++ + +L
Sbjct: 180 GCPDA--VIILEKEAIFKSFCQFVKEKNLNYLVITGKGFPDRLTRNFVTYLSKEYKNLAF 237
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGM 263
L VD + G+ IL T+K+ S+G +
Sbjct: 238 LGFVDADVYGINILKTYKY-SLGFSV 262
>gi|429852423|gb|ELA27559.1| meiosis-specific topoisomerase spo11 [Colletotrichum
gloeosporioides Nara gc5]
Length = 348
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 34/158 (21%)
Query: 208 SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
ILIT KG PD+ T+ LH L+ A P+LPI LVD++P G+ I+ + GS G E
Sbjct: 176 GILITGKGVPDLQTKQFLHLLHSAKPELPIYGLVDFDPYGVNIMRCYSHGSRGHAHEVGV 235
Query: 268 YACNVKWLGLRGDDVQLIPEQSLLP---------------------------LKPRDLQI 300
+++WLG++ D L+ Q L LK RD +I
Sbjct: 236 TVPSMQWLGIKSGD--LVGRQDLEDDDAHAEVLDLTVFRRQQSESNFEATDVLKERDRKI 293
Query: 301 ARSLMSS--EILQE---NYKEELSLMVHNGQRAEVEAL 333
A++L+ + + L E + EL +M+ +AE++A+
Sbjct: 294 AKTLLRNIPDDLDEYNIQCRRELQIMLFLNVKAEIQAV 331
>gi|20093950|ref|NP_613797.1| DNA topoisomerase VI subunit A [Methanopyrus kandleri AV19]
gi|19886903|gb|AAM01727.1| DNA topoisomerase VI, subunit A [Methanopyrus kandleri AV19]
Length = 346
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 16/293 (5%)
Query: 64 NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY-FTSQLQVNRTIQDVIAL 122
+K ++ V +++ + + T RE++Y + E F Q + + ++D+ A
Sbjct: 59 KGSKKLAQMLSVAAFAKELVEKGRSATLREIYY--TSEGWEVDFKDQRESDAIVEDLEAT 116
Query: 123 LHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
L R G+ G V G L+++E E I G SGY+I ++ +E LD
Sbjct: 117 LGLKREEFGVWPEEDGAAVYGDLLVREDGVE-IHAERAGISGYNIPPNVDAVEILD--CG 173
Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
A +I VE +++RL ++ ++ ++++ KG ATR LL RLN LP+
Sbjct: 174 AERVIAVETMGMYRRLVQERAHEKLNALIVGLKGQAARATRRLLRRLNEEL-GLPVYVFT 232
Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--QLIPEQSLLPLKPRDL 298
D +P G I + GS AC + K++G+ D+ +P + PLK D
Sbjct: 233 DGDPYGWHIYMVIRSGSAKAAHLNEELACPDAKFIGVTATDIVEYDLPTE---PLKKTDY 289
Query: 299 QIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
+ L + + K+EL L+ G++AE +A + DY+ K Y+ K+
Sbjct: 290 KRIEELRRDPRYYDPFWKKELDLLEKLGKKAEQQAFAKYSLDYVVKEYLPAKL 342
>gi|402467956|gb|EJW03175.1| hypothetical protein EDEG_02480 [Edhazardia aedis USNM 41457]
Length = 285
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 30/298 (10%)
Query: 57 TRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
TR L K + K E ++ +RE++Y+ S + F +Q ++R +
Sbjct: 12 TRRLLKDFTEPKLPSILKFYEILVEMHETSISKNKREIYYQ----SVKIFKNQRCIDRLV 67
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSAC-GSSGYSISGDLSLLEK 175
+ S L I AS +GL+ G ++ ++ +++ + G +
Sbjct: 68 DRMAQKFCLSASDLLITASLKGLIHGNIIFKQGGADLVRPNLIPDQKGVT---------- 117
Query: 176 LDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFP 233
++ T I+V+EK ++F + + + I + + KGYPD T + L R+
Sbjct: 118 -EIITPCSKIVVIEKDSLFSLICQQTAKHAILQNVLFVCGKGYPDNNTMYFLKRMEGK-- 174
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV--QLIPEQSLL 291
+ I L D++P G+ I C +K+GS + +++ +G+ DDV I E LL
Sbjct: 175 -VEIFGLFDYDPFGMHIYCVYKYGS-----KKNTGVLSMQRIGMCSDDVFKYKIDENELL 228
Query: 292 PLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKI 349
L D + SL+ + + ++ + + ++ E+E G ++ Y+ KI
Sbjct: 229 KLNVHDYKKLESLVKFD--DDMLHRDIQFLKNVDRKMEMEIFTGRGSSFIMTYLCDKI 284
>gi|254566367|ref|XP_002490294.1| Meiosis-specific protein that initiates meiotic recombination
[Komagataella pastoris GS115]
gi|238030090|emb|CAY68013.1| Meiosis-specific protein that initiates meiotic recombination
[Komagataella pastoris GS115]
Length = 367
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 26/227 (11%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
T+R+L+YK + F +Q ++ I+ + L LG+ S +GL+ G + +
Sbjct: 78 TTRRDLYYKDVA----LFRNQATIDALIEQLCDSLGVKGSDLGVFPSQKGLIFGSISIIY 133
Query: 149 PNQEVIDCSACGSSGYS-------ISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDF 201
N +C SS S D+ +L + + R +IV+EK A+F+RL E
Sbjct: 134 KNLVGKECCYQLSSSEKSQLTPNWFSNDVEILS-VRIPPTIRCVIVLEKDAVFKRLCES- 191
Query: 202 VFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI-- 259
+ Q IL+T KGYPD TR L L L + D + GL I T+K+G+
Sbjct: 192 SWAQDQYILVTGKGYPDHLTRQFLD-LMMKHTSLKVYGFFDSDIYGLLIANTYKYGTSQD 250
Query: 260 --GMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSL 304
M +E R ++W G+ D Q P++P+++Q+ SL
Sbjct: 251 LNKMLLEKNR----LQWAGVEILDY----TQGHQPVRPKEIQLMTSL 289
>gi|440300288|gb|ELP92777.1| meiotic recombination protein SPO11, putative [Entamoeba invadens
IP1]
Length = 327
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 130/273 (47%), Gaps = 21/273 (7%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
+ +K +++ V+ + +Q+L+ ++ T RE++Y F SQ + + I+++ L
Sbjct: 49 TTNSKKQLQIVVVLGSIYQLLATNRKSTAREIYY----THKAIFDSQKKTDNVIENITLL 104
Query: 123 LHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDA 182
L + L I + RGL+ G + L +ID S ++S +L
Sbjct: 105 LGSTLQGLHISKTPRGLLCGDVALV-TQYYIIDFSTTHQLP-TVSEPFTLC----FGKKR 158
Query: 183 RYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVD 242
+++++EK A F+R+ + V P +++ ++G+PD AT L ++ +P LVD
Sbjct: 159 VFLLIIEKEAFFERVVQSKVREMFPCLILCSRGFPDNATLDLAKAISSQSGVIP-CCLVD 217
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIAR 302
+ G+ I +F G + N++W LR + + L R+ +IA
Sbjct: 218 GDVYGIEIF--LQFLCNGWKNPTPQIP-NLRWALLRPSEFNGVSS-----LTKREQKIAE 269
Query: 303 SLMSSEILQEN--YKEELSLMVHNGQRAEVEAL 333
++++S ++Q N K E++ + ++AE++ L
Sbjct: 270 NMLNSSVVQNNEEIKNEINTIAFKNRKAELDEL 302
>gi|448318072|ref|ZP_21507608.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
gi|445600500|gb|ELY54508.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
Length = 251
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 11/240 (4%)
Query: 109 QLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP---NQEVIDCS-ACGSSG 163
Q + N I+D+ + +R + G V G L ++E I C G G
Sbjct: 1 QDESNGLIEDLEIVSGVTREDFHMRPEESGAKVMGPLHIREQTNRGDRAIHCQLDVGQGG 60
Query: 164 YSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRF 223
Y I + ++E LD DA +++ VE + RL E+ + +I++ G P ATR
Sbjct: 61 YQIPNNPDMIEFLD--NDAEFVLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARATRR 118
Query: 224 LLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDV 282
L R + DLP++ D +P I + +GSI + Y K++G++ D+
Sbjct: 119 LTKRFHDEL-DLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPADI 177
Query: 283 QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
+ + PL D+ S + Q +Y +E++ L + G+++E ++L G D++
Sbjct: 178 -VEYDLPTDPLSDSDVNALESELEDPRFQTDYWEEQIELQLEIGKKSEQQSLASRGLDFV 236
>gi|299752227|ref|XP_001830783.2| Spo11 [Coprinopsis cinerea okayama7#130]
gi|298409736|gb|EAU91152.2| Spo11 [Coprinopsis cinerea okayama7#130]
Length = 353
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
+E + D +++VVEK + KGYPDIATR L+ L A
Sbjct: 168 IESFGVDEDIAWVLVVEKELTATK----------------GKGYPDIATRHLVKSLGDAL 211
Query: 233 PD-LPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQ 288
P + + ALVD +P G+ IL +++GS M E A +KWLGLR +V +
Sbjct: 212 PKHVALAALVDCDPYGIDILSVYRYGSQSMRHENDTLATRRIKWLGLRISEVMEWDLDPS 271
Query: 289 SLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
LLPL D RS++ L +++EL G++AE+E L
Sbjct: 272 LLLPLTDYDENKIRSMLKRPHLPRRWRDELEATQARGRKAEIEVL 316
>gi|328350689|emb|CCA37089.1| Type II DNA topoisomerase VI subunit A [Komagataella pastoris CBS
7435]
Length = 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 29/250 (11%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
+ +VR+++++ L+ T+R+L+YK + F +Q ++ I+ + L
Sbjct: 79 SACYVRLFRLI---LDNLNSGTVTTRRDLYYKDVA----LFRNQATIDALIEQLCDSLGV 131
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYS-------ISGDLSLLEKLDL 178
LG+ S +GL+ G + + N +C SS S D+ +L + +
Sbjct: 132 KGSDLGVFPSQKGLIFGSISIIYKNLVGKECCYQLSSSEKSQLTPNWFSNDVEILS-VRI 190
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
R +IV+EK A+F+RL E + Q IL+T KGYPD TR L L L +
Sbjct: 191 PPTIRCVIVLEKDAVFKRLCES-SWAQDQYILVTGKGYPDHLTRQFLD-LMMKHTSLKVY 248
Query: 239 ALVDWNPAGLAILCTFKFGSI----GMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLK 294
D + GL I T+K+G+ M +E R ++W G+ D Q P++
Sbjct: 249 GFFDSDIYGLLIANTYKYGTSQDLNKMLLEKNR----LQWAGVEILDY----TQGHQPVR 300
Query: 295 PRDLQIARSL 304
P+++Q+ SL
Sbjct: 301 PKEIQLMTSL 310
>gi|88604153|ref|YP_504331.1| DNA topoisomerase VI subunit A [Methanospirillum hungatei JF-1]
gi|88189615|gb|ABD42612.1| DNA topoisomerase, type IIB [Methanospirillum hungatei JF-1]
Length = 340
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 23/272 (8%)
Query: 83 LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VA 141
+++ + T REL+Y F +Q N ++D+ L R + G +
Sbjct: 62 ITENRSSTLRELYYISEGWKRAKFAAQNDSNLLVEDLEILTDVQREHFHLRPEEDGASIF 121
Query: 142 GRLMLQEPNQEVIDCSAC----GSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL 197
G L ++E + C G SGY I ++ LE ++ DA+ +I +E ++ RL
Sbjct: 122 GPLRIREDTRRGTRELHCQDDIGESGYQIPTNVDSLEFVE--HDAQMVIAIETGGMYARL 179
Query: 198 TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFG 257
E+ + +IL+ KG P +TR +L+RL F LP+ D +P I + +G
Sbjct: 180 IENGFDEKYQAILVHLKGQPARSTRRVLNRLASEF-QLPVTVFTDGDPWSYRIFASVAYG 238
Query: 258 SIGMG-MEAYRYACNVKWLGLRGDDVQ-------LIPEQSLLPLKPRDLQIARSLMSSEI 309
+I + + +++G++ D++ L+ EQ + LK L
Sbjct: 239 AIKSAHISEILVTPSARFIGVQPSDIRDYDLPSDLLTEQDIAALKA-------ELTDPRF 291
Query: 310 LQENYKEELSLMVHNGQRAEVEALYFHGYDYL 341
+ +KE+++L + ++E +A G D++
Sbjct: 292 AGDYWKEQINLQLALNLKSEQQAFAARGLDFV 323
>gi|308160882|gb|EFO63349.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia P15]
Length = 368
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 69 FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRF 128
F R +++ + ++ + R L+Y +P + SQ Q N I + R
Sbjct: 61 FARALRMITESAGAIVKKTFINIRSLYYT----APSLYGSQTQSNVLIAEFCFGYGIERE 116
Query: 129 SLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVV 188
+ A+++GL+ G + + S IS L+++ TDA++++V+
Sbjct: 117 MMHYRAAAKGLLLGNCTMITQIGTITTSSLVP---VPISPHFFYLQQI--HTDAQFVLVI 171
Query: 189 EKHAIFQRLTEDF--VFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
EK IF+ L + + + +++ ++IT KGYPD ATR L+ L+ + I L D +
Sbjct: 172 EKDTIFEHLVDSYKAIRDKLGQSFMVITGKGYPDAATRALVSFLDSC--KILIFGLADGD 229
Query: 245 PAGLAILCTFKFGS 258
G+ ILCT+ +GS
Sbjct: 230 AHGMNILCTYAYGS 243
>gi|387595727|gb|EIJ93350.1| hypothetical protein NEPG_01692 [Nematocida parisii ERTm1]
Length = 305
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 132/280 (47%), Gaps = 40/280 (14%)
Query: 80 FQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL 139
+ +L++ K +T RE+FY+ C F Q +V + + D+ L+ +L I++ +GL
Sbjct: 58 YVLLNESKEMTVREVFYR--CK--RLFKEQKKVIKILGDIEKRLN---ITLNIISGYKGL 110
Query: 140 VAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD----LKTDARYIIVVEKHAIFQ 195
+ G +C + I + S++ ++ + T A +IVVEK AIF
Sbjct: 111 LYG------------ECKIVKEAEEIIMKNTSVIPRVRPGERVVTGASVVIVVEKEAIFN 158
Query: 196 RLTEDF--VFNQIPSILI-TAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+ ++ + N++ +LI T KGYP T L L+ + I L D +P GL+I
Sbjct: 159 DIIQEIENIENKVGKVLIITGKGYPCTNTLMFLGVLS----SVRIYGLFDCDPHGLSIYS 214
Query: 253 TFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQE 312
+K+GS + N++ +G+ D+ + E + R QI LM+ + ++E
Sbjct: 215 VYKYGS---KKRPHLKIPNMQRIGVHLQDIPVTRETIYI---HRKYQIT-LLMNLKTIEE 267
Query: 313 NYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQA 352
K ++ +M+ + A +E + Y KYI KI+ +
Sbjct: 268 -LKNDIDIMIKTKRVASIEEIVQIKPVY--KYITGKIMHS 304
>gi|429329748|gb|AFZ81507.1| hypothetical protein BEWA_009190 [Babesia equi]
Length = 175
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 157 SACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKG 215
+A SG SI+ ++ KL RY+++VEK I+ RL + + + P ++I ++G
Sbjct: 2 TALQPSGCSITSFGTIEVKL-WPRGLRYVLIVEKETIYYRLLQCAILKRHNPCVMILSRG 60
Query: 216 YPDIATRFLLHRLNRAFPDL--PILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNV- 272
+PDIATR LL+ + L PIL L D+N AGL I TF G I Y C++
Sbjct: 61 FPDIATRELLYEIRNHSKKLNVPILCLTDFNRAGLNIALTFYRGPIKTNY--YTNECSIP 118
Query: 273 --KWLGLRGDD 281
KWL L D
Sbjct: 119 ELKWLYLGKRD 129
>gi|358371609|dbj|GAA88216.1| meiotic recombination protein Spo11 [Aspergillus kawachii IFO 4308]
Length = 401
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 33/322 (10%)
Query: 39 SQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKL 98
+Q L T + ++ + R N A F +V+ + + + +++R+++Y
Sbjct: 70 TQALETSEMQTYTTYRWPGRD---GNEAWRFTVALRVLAAIAEAVQEGLVISKRDIYYS- 125
Query: 99 LCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA 158
P F +Q V+ + D+ + R +L + A+++GLV G + V+D
Sbjct: 126 ---DPACFGTQRTVDTLVDDLAHTMGVDRAALYVEAAAKGLVVGYYRIITRMDAVVDARF 182
Query: 159 CGSSG-YSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILIT----- 212
+ D+ ++ D+ + + I + + P LI
Sbjct: 183 SNQDTLVPRTQDIHEVDLADVAWAVYRRLASSNYHIRSAAGKGILVTVRPCSLIKFQEKY 242
Query: 213 ----AKGYPDIATRFLLHRLNRAFPDLP-----ILALVDWNPAGLAILCTFKFGSIGMGM 263
AKGYPD+ TR + +L L ALVD +P G+AI+ T+K+GS+
Sbjct: 243 QQFQAKGYPDLNTRAFVRKLFDHSRQLTHKRPQFYALVDGDPDGMAIMATYKYGSVAFAH 302
Query: 264 EAYRYAC-NVKWLGLRGDDV----QLIPEQSLLPLKPRDLQIARSLMSSEIL------QE 312
E + WLGL+ DV + + +L+ L RD + +++S + +
Sbjct: 303 ENRNLNVPGLHWLGLKIPDVVAGADPLEDNTLIRLTKRDRKKIVAMLSRNPIWAADGPEP 362
Query: 313 NYKEELSLMVHNGQRAEVEALY 334
++ EL ++ +AE E LY
Sbjct: 363 EWRIELQRLLILNVKAETEILY 384
>gi|45187898|ref|NP_984121.1| ADR025Wp [Ashbya gossypii ATCC 10895]
gi|44982682|gb|AAS51945.1| ADR025Wp [Ashbya gossypii ATCC 10895]
gi|374107337|gb|AEY96245.1| FADR025Wp [Ashbya gossypii FDAG1]
Length = 364
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 55 FCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNR 114
+ R T S A+ V++T + + T R++FY + E + Q V
Sbjct: 82 YPARGSTTSAGARRAATFVSVLKTVHTRMRSRQTATVRDVFY----GNVELYGRQQVV-- 135
Query: 115 TIQDVIALLHC---SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLS 171
+ ++AL C + I+A+ +GLV + L+ QE+ G Y
Sbjct: 136 -VDWLVALEQCFGVEKSVFRILAAQKGLVHVPVPLEVEGQEL---KGVGLIPYVSDSSCV 191
Query: 172 LLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
++ D +IVVEK A+F RLT + I+IT KGYPD TR L+RL +
Sbjct: 192 SCKQWDA---VEAVIVVEKEAVFHRLTRAAAYCS-NKIIITGKGYPDQLTRVFLYRLLAS 247
Query: 232 FP-DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYA 269
P ++ + A+ D +P G+ I+ + S GM+ + Y
Sbjct: 248 APRNVAVRAIADSDPYGIDIVLKYCGASPAPGMQRFDYG 286
>gi|291333526|gb|ADD93223.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C37]
Length = 207
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 159 CGSSGYSISGDLSLLEKLDL-KTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
G SGY + ++ EK++L + D +I+ +E +F RL E+ L+ KG P
Sbjct: 10 VGDSGYGVPYNVET-EKIELLENDIDFIMAIETGGMFDRLIENGFDEDYRCGLLHLKGQP 68
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLG 276
+TR ++ R++ + DLP++ +D +P I + +G+I + Y + +LG
Sbjct: 69 ARSTRRIIKRMSEEW-DLPVVVFLDGDPWSFRIFASIAYGAIKTAHISEYLATPSATYLG 127
Query: 277 LRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEILQEN-YKEELSLMVHNGQRAEVEAL 333
+ DD+ +P L +D++ + +S ++ +++++++M+ ++AE ++L
Sbjct: 128 ITADDIVAYDLPSDD---LSKKDIEALNAELSDPRFADSWWQDQINMMLELDKKAEQQSL 184
Query: 334 YFHGYDYLGK-YIAKKIVQ 351
+G D++ + Y+ +K+ +
Sbjct: 185 AKYGLDFVTETYLPEKLAE 203
>gi|448439380|ref|ZP_21588021.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
gi|445691431|gb|ELZ43622.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
Length = 361
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 18/305 (5%)
Query: 48 WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
W + + TRS A+ ++ +E L ++ T REL+Y + +
Sbjct: 49 WTYGDRT-STRSANSVRGARKLLKAAYTIEFLANQLDDDRSSTLRELYYLSESWDNDEAQ 107
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
F+SQ + N ++D+ + +R + G + G L+++E + I C G
Sbjct: 108 FSSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLLIREQTRRGEREIHCQEDVG 167
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
+ GY I + +++ L D + + VE + RL E+ ++I KG P A
Sbjct: 168 AGGYQIPNNPDMIDFL--DDDIDFALAVETGGMRDRLVENGFDEAYNCLVIHLKGQPARA 225
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
TR + R++ D+PI D +P I + +GSI + Y +++G++
Sbjct: 226 TRRITKRVHDEL-DVPIAVFADGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQP 284
Query: 280 DDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
+D+ +P PL D+ S + Q +Y +E++ L + G+++E ++L
Sbjct: 285 EDIVEYDLPSD---PLSDSDVNALESELEDPRFQTDYWEEQIELQLDIGKKSEQQSLASR 341
Query: 337 GYDYL 341
G D++
Sbjct: 342 GLDFV 346
>gi|378755995|gb|EHY66020.1| hypothetical protein NERG_00716 [Nematocida sp. 1 ERTm2]
Length = 313
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 45/309 (14%)
Query: 41 GLLTDVSWIFLSHSFCTRSLTKSNAAKAFVR-----------VWKVMETCFQILSQEKRV 89
G+L D S L + C S N A + V+ + IL + K +
Sbjct: 14 GILKDKSTFLLRYKECKYSDILYNDILAVIEDVIIGRMRLECAIPVLNVYYVILCECKEI 73
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG--RLMLQ 147
T RE+FY+ F +Q R I D I + SL IV S +GLV G L +Q
Sbjct: 74 TIREIFYR----CKRVFKNQNHTVRVI-DYIKIRLKIEISL-IVPSYKGLVHGIFSLKIQ 127
Query: 148 EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVF-NQI 206
E ++ + S + ++ + T A IIVVEK A+F + +D + N++
Sbjct: 128 EKVVQMENTSIIPR----------IQKETKIFTKASAIIVVEKEAVFNDIIQDTAYKNRM 177
Query: 207 PSILI-TAKGYPDIAT-RFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGME 264
I+I T KGYP T +FL + R+ + I L D +P GL+I +K+GS
Sbjct: 178 EEIIIVTGKGYPCTNTLKFL--SIARS---IRIFGLFDCDPHGLSIYAVYKYGS---KRN 229
Query: 265 AYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHN 324
+ +++ +G+ ++ + PE + K + + + R+L + E LQ ++++M
Sbjct: 230 PHLKVPSMERIGIHLYEIPVTPETMYITDK-KQISLIRNLRNLEELQ----NDINIMEET 284
Query: 325 GQRAEVEAL 333
++A +E +
Sbjct: 285 RRKASIEDI 293
>gi|147920485|ref|YP_685722.1| DNA topoisomerase VI subunit A [Methanocella arvoryzae MRE50]
gi|110621118|emb|CAJ36396.1| type II DNA topoisomerase VI, subunit A [Methanocella arvoryzae
MRE50]
Length = 375
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 20/294 (6%)
Query: 52 SHSFCTRSLTKSN--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY---- 105
S S T S+T +N A + ++ ++ + + T+R+ +Y L +Y
Sbjct: 60 STSGDTLSMTTANIDQAASLAKLQFLINHVIETIVANSVSTKRDCYYMLKNQFQKYPWMD 119
Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL-MLQEPNQEVIDCSACGSSGY 164
T Q + +R I + ++ +R +L ++A +GL+ G + ++ E E CG
Sbjct: 120 LTGQGESDRLIDTLERIIRLNRENLNVIADPKGLIYGDITIVDEEGTEF----TCGEREQ 175
Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
SI+G E K + +I +EK +F L + V +++ L+ G P R L
Sbjct: 176 SITGFAGQWEIK--KYGVKAVIPIEKTGVFMDLKKLKVADELNIGLVHLGGQPARGCRAL 233
Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQL 284
+ L+ +PI L D++P I + GSI + +A +LG+ DV
Sbjct: 234 IKLLSE--KGIPIGVLTDFSPWSGMIAKSVMSGSINAAHLSGLHASKAAFLGIESADVDT 291
Query: 285 ----IPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEAL 333
+ + PL DL A++ +S +Q++Y K E V + ++ E+EAL
Sbjct: 292 WLKDVWKSVQEPLSKNDLLRAQNNLSLPYMQDDYWKGENEWFVRHARKTELEAL 345
>gi|222616113|gb|EEE52245.1| hypothetical protein OsJ_34188 [Oryza sativa Japonica Group]
Length = 631
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I D LL +R SL I SRG + G ++ + +ID S I D+ L+
Sbjct: 497 RRINDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLV 553
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ + LK +++VVEK +IF L I+IT G PD+ATR + +LN P
Sbjct: 554 DHIKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLP 613
Query: 234 DLPILALVDWNPAGLAI 250
+ + L D + GL I
Sbjct: 614 -VKVYILADLDLDGLQI 629
>gi|387594072|gb|EIJ89096.1| hypothetical protein NEQG_00915 [Nematocida parisii ERTm3]
Length = 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 40/279 (14%)
Query: 80 FQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL 139
+ +L++ K +T RE+FY+ F Q +V + + D+ L+ +L I++ +GL
Sbjct: 58 YVLLNESKEMTVREVFYR----CKRLFKEQKKVIKILGDIEKRLN---ITLNIISGYKGL 110
Query: 140 VAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLD----LKTDARYIIVVEKHAIFQ 195
+ G +C + I + S++ ++ + T A +IVVEK AIF
Sbjct: 111 LYG------------ECKIVKEAEEIIMKNTSVIPRVRPGERVVTGASVVIVVEKEAIFN 158
Query: 196 RLTEDF--VFNQIPSILI-TAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
+ ++ + N++ +LI T KGYP T L L+ + I L D +P GL+I
Sbjct: 159 DIIQEIENIENKVGKVLIITGKGYPCTNTLMFLGVLS----SVRIYGLFDCDPHGLSIYS 214
Query: 253 TFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQE 312
+K+GS + N++ +G+ D+ + E + R QI LM+ + ++E
Sbjct: 215 VYKYGS---KKRPHLKIPNMQRIGVHLQDIPVTRETIYI---HRKYQIT-LLMNLKTIEE 267
Query: 313 NYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQ 351
K ++ +M+ + A +E + Y KYI KI+
Sbjct: 268 -LKNDIDIMIKTKRVASIEEIVQIKPVY--KYITGKIMH 303
>gi|218185894|gb|EEC68321.1| hypothetical protein OsI_36417 [Oryza sativa Indica Group]
Length = 213
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 136 SRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQ 195
SRG + G ++ + +ID S I D+ L++ + LK +++VVEK +IF
Sbjct: 2 SRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLVDHIKLKKPVSFVLVVEKLSIFN 58
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK 255
L I+IT G PD+ATR + +L+ P + + L D + GL I T+K
Sbjct: 59 MLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLSYCLP-VKVYILADLDLDGLQIYFTYK 117
Query: 256 FGSIGMGMEAYRYAC----NVKWLGLRGDDVQLIPEQSLLPLKPRDL 298
GS + A+ C ++ WLG R PE SLL +P +
Sbjct: 118 LGS---KVRAFENLCVASRDLIWLGAR-------PEDSLLLQEPNEF 154
>gi|115485829|ref|NP_001068058.1| Os11g0545300 [Oryza sativa Japonica Group]
gi|77551413|gb|ABA94210.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113645280|dbj|BAF28421.1| Os11g0545300 [Oryza sativa Japonica Group]
gi|215694567|dbj|BAG89560.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I D LL +R SL I SRG + G ++ + +ID S I D+ L+
Sbjct: 366 RRINDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLV 422
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ + LK +++VVEK +IF L I+IT G PD+ATR + +LN P
Sbjct: 423 DHIKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLP 482
Query: 234 DLPILALVDWNPAGLAI 250
+ + L D + GL I
Sbjct: 483 -VKVYILADLDLDGLQI 498
>gi|282162710|ref|YP_003355095.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
gi|282155024|dbj|BAI60112.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
Length = 377
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 18/254 (7%)
Query: 90 TQRELFYKLLCDSPEY----FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLM 145
T+R+ +Y L +Y + Q + +R I + ++ R +L I+A +GL+ G +
Sbjct: 102 TKRDCYYMLKNQFQKYPWMDLSGQGESDRLIDTLERIIRMQRENLNIIADPKGLIYGDIT 161
Query: 146 LQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFN 204
L + + +C I+G L + ++K+ + +I +EK +F L + V +
Sbjct: 162 LVDEEGKEFNCH---EREQGITG---LAGQWEVKSHHVKAVIAIEKTGVFMDLKKLKVAD 215
Query: 205 QIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGME 264
++ LI G P R L++ L+ +PI L D +P I + GSI
Sbjct: 216 ELGIGLIHLGGQPARGCRALINLLSE--KGIPIGVLTDLSPWSGMIAKSVLSGSIAAAHL 273
Query: 265 AYRYACNVKWLGLRGDDV----QLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELS 319
+ +A +LG+ DV + + + PL D A++ +S +Q++Y K E S
Sbjct: 274 SGLHASKAAFLGIESSDVDDWLKDVWKSVQEPLSGHDTARAQNNLSLPYMQDDYWKGENS 333
Query: 320 LMVHNGQRAEVEAL 333
V +G++ E+EAL
Sbjct: 334 WFVKSGKKTELEAL 347
>gi|269914813|gb|ACZ52154.1| topoisomerase 6 subunit A-like protein [Oryza sativa Japonica
Group]
Length = 714
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I D LL +R SL I SRG + G ++ + +ID S I D+ L+
Sbjct: 580 RRINDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLV 636
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ + LK +++VVEK +IF L I+IT G PD+ATR + +LN P
Sbjct: 637 DHIKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLP 696
Query: 234 DLPILALVDWNPAGLAI 250
+ + L D + GL I
Sbjct: 697 -VKVYILADLDLDGLQI 712
>gi|37359311|gb|AAN52840.1| SPO11-1C [Oryza sativa Japonica Group]
gi|37359315|gb|AAN52842.1| SPO11-1D [Oryza sativa Japonica Group]
Length = 302
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I D LL +R SL I SRG + G ++ + +ID S I D+ L+
Sbjct: 168 RRINDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLV 224
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ + LK +++VVEK +IF L I+IT G PD+ATR + +LN P
Sbjct: 225 DHIKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLP 284
Query: 234 DLPILALVDWNPAGLAI 250
+ + L D + GL I
Sbjct: 285 -VKVYILADLDLDGLQI 300
>gi|37359313|gb|AAN52841.1| SPO11-1A [Oryza sativa Japonica Group]
Length = 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I D LL +R SL I SRG + G ++ + +ID S I D+ L+
Sbjct: 112 RRINDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLV 168
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ + LK +++VVEK +IF L I+IT G PD+ATR + +LN P
Sbjct: 169 DHIKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLP 228
Query: 234 DLPILALVDWNPAGLAI 250
+ + L D + GL I
Sbjct: 229 -VKVYILADLDLDGLQI 244
>gi|37359317|gb|AAN52843.1| SPO11-1B [Oryza sativa Japonica Group]
Length = 246
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 114 RTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLL 173
R I D LL +R SL I SRG + G ++ + +ID S I D+ L+
Sbjct: 112 RRINDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDASL---RAVQIPHDIHLV 168
Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
+ + LK +++VVEK +IF L I+IT G PD+ATR + +LN P
Sbjct: 169 DHIKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLP 228
Query: 234 DLPILALVDWNPAGLAI 250
+ + L D + GL I
Sbjct: 229 -VKVYILADLDLDGLQI 244
>gi|50556168|ref|XP_505492.1| YALI0F16335p [Yarrowia lipolytica]
gi|49651362|emb|CAG78301.1| YALI0F16335p [Yarrowia lipolytica CLIB122]
Length = 337
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 148/322 (45%), Gaps = 45/322 (13%)
Query: 36 SRVSQGLLTDVSW--IFLSH--------SFCTRSLTKSNAAKAFVRVWKVMETCFQILSQ 85
SR+ + D+S IF +H + C S+ N ++R+ +++++C L +
Sbjct: 15 SRLKKQFHEDISSASIFETHASKGIPLTTLCGNSV---NRFSIYLRLLQIIKSC---LDK 68
Query: 86 EKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA-LLHCSRFSLGIVASSRGLV---- 140
+K T+R+++Y D+ F +Q V+ I + L R SL +VA+ +GL+
Sbjct: 69 DKITTKRDIYY----DAVNLFKTQGVVDSCIARITNDFLQVPRDSLNVVAAQKGLIYSAC 124
Query: 141 --AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLT 198
A + ++ + + ++ + ++S ++ L I++VEK A+F L
Sbjct: 125 DSALTISYKDDYRAPVTIPTHTTTLIPYTTNISDIQ---LAPQVNCILIVEKEAVFTTLC 181
Query: 199 EDFVFNQIP--SILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKF 256
IP ++LIT KGYPD T+ + + LP+ VD +P G+ I T+++
Sbjct: 182 A-----YIPKDTLLITGKGYPDHMTQDFVRLFDEM---LPLFICVDADPHGIHIAATYRY 233
Query: 257 GSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKE 316
S ++ ++G+ D + + LPL+ ++ + A L+S+ ++
Sbjct: 234 RSFVRAPSLQGLGSSISYIGVSLVDFK----RGHLPLEDKNRKHAGRLLSAITGRQAEAL 289
Query: 317 ELSLMVH-NGQRAEVEALYFHG 337
EL + N + E++ + F G
Sbjct: 290 ELGDYIEMNKWKLELQRMLFLG 311
>gi|154345964|ref|XP_001568919.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066261|emb|CAM44052.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 526
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 25/181 (13%)
Query: 102 SPEYFTSQL-QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQ-EVIDCSAC 159
SP SQL + R + L +R SLGI A+ + L+AG L+L+ + E+ID SA
Sbjct: 183 SPRRLLSQLPRGTRGVASATPLY--TRESLGITAAGKSLLAGALILELCDPVELIDVSAR 240
Query: 160 GSSGYSI--------------SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQ 205
GSSG ++ SG + + L + ++++EK I + + + +
Sbjct: 241 GSSGITLTYPLATRMVGCREASGWQAARNGISLSRPCK-LVLIEKEGIHHAVLQSMMKSD 299
Query: 206 IPS----ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFK--FGSI 259
P +L+ KGYP +ATR L R + +P L +VD +P GL I T GS
Sbjct: 300 TPQTHSYVLLCTKGYPCVATRQWLRRAHALWPALQFYVMVDGDPHGLCIALTVMGLLGSK 359
Query: 260 G 260
G
Sbjct: 360 G 360
>gi|303389050|ref|XP_003072758.1| DNA topoisomerase VI subunit A [Encephalitozoon intestinalis ATCC
50506]
gi|303301900|gb|ADM11398.1| DNA topoisomerase VI subunit A [Encephalitozoon intestinalis ATCC
50506]
Length = 296
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 24/263 (9%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEP 149
+RE+FY + F SQ V R I + + L S+ L I + +G G+L +
Sbjct: 48 NEREIFYM----AVNIFKSQTAVKRLISTIASELRVSKSDLRIRNTLKGTFIGKLAFVK- 102
Query: 150 NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS- 208
++I+ S+C ++ I ++E ++VVEK I QR+ +
Sbjct: 103 GPDIIEMSSCRNNPQLIPDMEGIVEVF---CSYERVLVVEKDTILQRIASGIERERYLEG 159
Query: 209 -ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYR 267
+L+ +GYP T LL + I L D++P G+ I C +K+GS EA
Sbjct: 160 VLLVCGRGYPCKNTMLLLKMIEHK---TAIGGLFDFDPFGIHIFCVYKYGS----REAPE 212
Query: 268 YAC-NVKWLGLRGDDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHN 324
+ +G+ +D+ + I + L L DL++ LM E + + L+
Sbjct: 213 TRVETIVRIGVCAEDILDKRIHQDGLAGLNKYDLKMVDRLMEFEC----FTNDPLLLKKT 268
Query: 325 GQRAEVEALYFHGYDYLGKYIAK 347
G++ E+EA G + ++ K
Sbjct: 269 GKKVEMEAFLSKGRREMNHFLTK 291
>gi|156836466|ref|XP_001642294.1| hypothetical protein Kpol_206p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156112787|gb|EDO14436.1| hypothetical protein Kpol_206p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 374
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 47/293 (16%)
Query: 75 VMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC----SRFSL 130
+++T L + T R+++Y + E F SQ +V +Q L H SR
Sbjct: 97 LLKTVHNKLCSREVSTIRDVYY----GNTELFKSQSKV---VQWFGVLQHSMGLKSRDVF 149
Query: 131 GIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY--SISGDLSLLEKLDLKTDARYIIVV 188
+V + +GL + L + +G IS D L K D+ + R IIV+
Sbjct: 150 NVVPAQKGLCFSPVNLYFTRATADNDVVANKAGLIPYISQDSRLFWKEDI-SQIRKIIVI 208
Query: 189 EKHAIFQRLTEDFVFNQIPS-ILITAKGYPDIATRFLLHRLNR--AFPDLPILALVDWNP 245
EK A+F +LT + N I IL+T KGYPD TR L++L + D+ D +P
Sbjct: 209 EKEAVFNKLTINP--NDIQHCILVTGKGYPDFLTRLFLNKLQKLTHSSDIDWEVYTDADP 266
Query: 246 AGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSL---------LPLKPR 296
G+ I + + E +Y C + L +G + + Q+L L LKPR
Sbjct: 267 HGVHISLKY------LNNEEEQYNC--QKLAFKGAFISRLVNQTLDDTNKLGQILDLKPR 318
Query: 297 DLQIARSLM-----------SSEILQENYKEELSLMVHNGQRAEVEALYFHGY 338
D+ +A L+ +++ + +K EL + ++AE+ +L Y
Sbjct: 319 DISLATKLIQQLSTETETEPTNQTRNKTFKTELQRQLFYFKKAEMNSLSIDFY 371
>gi|146102960|ref|XP_001469454.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073824|emb|CAM72563.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 533
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQ-EVIDCSACGSSG----YSISGDLSLLEKLDLKT 180
+R SLGI A+ + L+AG + L+ + E+ID SA GS+G YS++ + + +
Sbjct: 212 TRESLGITAAGKSLLAGAITLELCDPVELIDVSARGSAGITLTYSLATRMVGCREAGVWQ 271
Query: 181 DAR---------YIIVVEK----HAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
AR ++++EK HA+ Q +T+ + IL+ KGYP +A R L R
Sbjct: 272 AARDGISSSRPYKLVLIEKESVHHAVLQSMTKSGTPHTYSCILLCTKGYPCVAAREWLRR 331
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFK--FGSIG 260
++ P L + +VD +P GL I T GS G
Sbjct: 332 VHALRPALQLYIMVDGDPDGLGIALTVMGLLGSKG 366
>gi|398024492|ref|XP_003865407.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503644|emb|CBZ38730.1| hypothetical protein, conserved [Leishmania donovani]
Length = 533
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQ-EVIDCSACGSSG----YSISGDLSLLEKLDLKT 180
+R SLGI A+ + L+AG + L+ + E+ID SA GS+G YS++ + + +
Sbjct: 212 TRESLGITAAGKSLLAGAITLELCDPVELIDVSARGSAGITLTYSLATRMVGCREAGVWQ 271
Query: 181 DAR---------YIIVVEK----HAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
AR ++++EK HA+ Q +T+ + IL+ KGYP +A R L R
Sbjct: 272 AARDGISSSRPYRLVLIEKESVHHAVLQSMTKSGTPHTYSCILLCTKGYPCVAAREWLRR 331
Query: 228 LNRAFPDLPILALVDWNPAGLAILCTFK--FGSIG 260
++ P L + +VD +P GL I T GS G
Sbjct: 332 VHALRPALQLYIMVDGDPDGLGIALTVMGLLGSKG 366
>gi|451999964|gb|EMD92426.1| hypothetical protein COCHEDRAFT_1193911 [Cochliobolus
heterostrophus C5]
Length = 730
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 28/166 (16%)
Query: 196 RLTEDFVFNQIPSILI---TAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILC 252
R + + +I ILI AKGYPD+A+R L +L +P+ LVD +P G+AIL
Sbjct: 12 RDNDSWDLTEIQWILIIEKEAKGYPDVASRQFLRQLGTNAHHIPMFVLVDLDPDGIAILS 71
Query: 253 TFKFGSIGMGME-----AYRYAC--NVKWLGLRGDDV--QLIPE-----------QSLLP 292
T+K+GS + E C NV+WLG++ D++ L+ E Q L+
Sbjct: 72 TYKYGSYRLMHEDVALMNTSALCLPNVQWLGVKSDNMSPSLVGEDGTERKMIHQLQGLMR 131
Query: 293 LKPRDLQIARSLMSSEILQEN-----YKEELSLMVHNGQRAEVEAL 333
L RD A ++ ++ E+ ++ EL M+ +AE++ L
Sbjct: 132 LTTRDRIKATRMLEWDLCAEDGFERGWRRELQWMLMLNVKAEMQVL 177
>gi|342873690|gb|EGU75847.1| hypothetical protein FOXB_13647 [Fusarium oxysporum Fo5176]
Length = 371
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 49/214 (22%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F R+ +++ L +T+R +FY+ F Q QV+ + D+ L
Sbjct: 100 AVKFARILLILQLSHDALVSGTVLTKRHIFYQ----HQHLFEKQGQVDDLVDDIAFSLGI 155
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVID-CSACGSSGYSISGDLSLLEKLDLKTDARY 184
SR L IVA+S+G +AG L+++ + ++ CS G G +I + + +D++ + ++
Sbjct: 156 SRGDLNIVAASKGALAGPLLIRFRDGSTLNPCS--GDLGVAIP-TVQSISSVDVQ-NIKW 211
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWN 244
I+VVEK +P LP+L L D++
Sbjct: 212 ILVVEKD----------------------------------------YPQLPLLGLFDYD 231
Query: 245 PAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLR 278
P G+ IL ++ GS + EA ++WLG+R
Sbjct: 232 PDGIKILRCYRHGSERLSHEADLGIEALRWLGIR 265
>gi|383318869|ref|YP_005379710.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
gi|379320239|gb|AFC99191.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
Length = 431
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 22/290 (7%)
Query: 57 TRSLTKSN--AAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY----FTSQL 110
T S++ SN A + ++ ++ + ++ T+R+ +Y L +Y Q
Sbjct: 121 TVSMSTSNIDQAASMAKLQFLINHIIETIAANSVSTKRDCYYMLKNQFQKYPWMDLDGQG 180
Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRL-MLQEPNQEVIDCSACGSSGYSISGD 169
+ +R I + ++ R +L I A +GL+ G + ++ E +E +C SI+G
Sbjct: 181 ESDRLIGTLERIIRMQRENLNITADPKGLIYGDISLIDEEGKEF----SCKEREQSITG- 235
Query: 170 LSLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
L + ++K+ + ++ +EK +F L + V + + LI G P R L+ L
Sbjct: 236 --LAGQWEVKSYGVKALVAIEKTGVFMDLKKLKVADGLKIGLIHLGGQPARGCRALISLL 293
Query: 229 NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDV----QL 284
+ +PI L D +P I + GSI +A +LG+ DV +
Sbjct: 294 --SCKGIPIGVLTDLSPWSGMIAKSVLSGSIASAHLRGLHAPGAAFLGIESSDVDSWLKD 351
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEAL 333
+ + PL DL AR+ +S +Q+ Y K E S + NG++ E+EAL
Sbjct: 352 VWKGVQEPLSDLDLARARNNLSLPYMQDGYWKGENSWFIRNGKKTELEAL 401
>gi|475130|gb|AAA35332.1| rec12 [Schizosaccharomyces pombe]
Length = 139
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGD 280
TR L +L +A PD + DW+P GL I FK+GS E + N++ LG +
Sbjct: 2 TRKFLVKLAKALPDAKFFGIFDWDPHGLCIYSCFKYGSNAYSHEPHSQLRNLQLLGPLYE 61
Query: 281 DVQLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEAL 333
D+ ++ L L RD+++ +L+ E Q+ +E+L M+ ++AE++A+
Sbjct: 62 DIFNKNQEFSLKLNKRDIKMITTLLQFEGFQKEPVVREQLQRMLFIQKKAEIQAI 116
>gi|433426699|ref|ZP_20406922.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
gi|432196864|gb|ELK53285.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
Length = 192
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
G GY I + +E L + D +++ VE + RL E+ + ++++ G P
Sbjct: 3 VGQGGYQIPNNPDTIEFL--EHDVEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPA 60
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
ATR + RL+ DLP++ D +P I + +GSI + Y + K++G+
Sbjct: 61 RATRRITKRLHDEL-DLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGI 119
Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARS-LMSSEILQENYKEELSLMVHNGQRAEVEALYFH 336
+ D+ + + PL D+ S L + + + E++ L + G++AE +AL
Sbjct: 120 QPQDI-VDYDLPTDPLADSDINALESELEDPRFMGDYWTEQIELQLDIGKKAEQQALASR 178
Query: 337 GYDYL 341
G D++
Sbjct: 179 GLDFV 183
>gi|363752201|ref|XP_003646317.1| hypothetical protein Ecym_4458 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889952|gb|AET39500.1| hypothetical protein Ecym_4458 [Eremothecium cymbalariae
DBVPG#7215]
Length = 367
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 56 CTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRT 115
CT + + + A F+ V K ++T ++L E T R+++Y + E + Q V+
Sbjct: 86 CTLAASAAQRAATFLSVMKTIQT--RMLKSET-TTIRDVYYS----NVELYKRQQVVSDW 138
Query: 116 IQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEK 175
I + + IVA+ +G+++ + L+ N E+ G++ S ++
Sbjct: 139 ISTFEQCFGVEKSTFRIVAAQKGIISTPVPLKIDNTEI-----RGTNLIPYITTESAVKC 193
Query: 176 LDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP-D 234
D K ++++EK A+F +L D +N+ IL+T KGYPD TR L +L + P
Sbjct: 194 TDWK-QVNKVVILEKDAVFHKLARDAQYNK-DKILVTGKGYPDHLTRIFLRQLLKVAPAH 251
Query: 235 LPILALVDWNPAGLAIL--CTFKFGSIGMGMEAYR--YACNVKWLGLRGDDVQLIPEQS- 289
+ + A D +P G+ I C GS Y + N+ LG + E S
Sbjct: 252 IQVEAFCDSDPYGIDITLKCCEGVGSPTARRLNYGGIFLHNLLDLGSHNSTTTTVVEGSN 311
Query: 290 LLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEV 330
L + PRD + MS +LQ E +L+ ++G R+ +
Sbjct: 312 LQDISPRDWK-----MSQRMLQNLTGTEQTLL-NDGTRSTI 346
>gi|46123143|ref|XP_386125.1| hypothetical protein FG05949.1 [Gibberella zeae PH-1]
Length = 414
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 60/241 (24%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F R+ +++ L +T+R +FY+ + F Q +V+ + D+ L
Sbjct: 99 ATKFARILLILQLSHDALVSGTVLTKRHIFYQ----HQDLFEKQREVDDLVDDIAFTLGI 154
Query: 126 SRFSLGIVASSRGLVAGRLML----------------------QEPNQEV------IDCS 157
SR L IVA+S+G++AG L + PN V C
Sbjct: 155 SRGDLNIVAASKGVLAGPLTIGLHDGSTLNPCLGDLILIGVGSSYPNCSVNFWCRHPRCQ 214
Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
SG ++LL + ++E +++ R T +
Sbjct: 215 IDSGSGEGCRLQITLL-----------LSILEGVSVWPRCTCHY---------------- 247
Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGL 277
+ TR L+ ++ +P LPIL L D++P G+ I+ +++GS + EA ++WLG+
Sbjct: 248 -LTTRSFLNLVSTRYPQLPILGLFDFDPDGVKIMRCYRYGSDRLSHEADLGTETLQWLGI 306
Query: 278 R 278
+
Sbjct: 307 K 307
>gi|413933052|gb|AFW67603.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 232
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
+V+ Q+L Q K ++R+++Y P F V+R I D+ L CSR +L +V
Sbjct: 103 RVLFVVQQLLQQNKHCSKRDIYYMY----PSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEK 190
+GLV G + E ++V C ++ +SI D+ ++ D+ + A YI+VVEK
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVY-CITSVNAAFSIPVDIEAIK--DVVSVAHYILVVEK 212
>gi|396081258|gb|AFN82876.1| DNA topoisomerase VI subunit A [Encephalitozoon romaleae SJ-2008]
Length = 301
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 40/271 (14%)
Query: 91 QRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
+RE+FY F +Q V R I + + L S++ LG+ + +G GRL +
Sbjct: 50 EREIFYM----DVNVFRTQTTVKRMISSIASELRVSKYELGVRNTLKGTFIGRLTFIK-- 103
Query: 151 QEVIDCSACGS-SGYSISG---------DLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
CGS S I D+S ++ ++ D + ++VVEK I QR+ +
Sbjct: 104 --------CGSLSAMEICSPENTPQLIPDMSKVK--EVLCDYKKVLVVEKDTILQRIASE 153
Query: 201 FVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGS 258
+ +L+ +GYP T LL + I D++P G+ I C +K GS
Sbjct: 154 IGRERCLEGVLLVCGRGYPCKNTMLLLKMIENK---TTISGFFDFDPFGIHIFCIYKHGS 210
Query: 259 IGMGMEAYRYACNVKWLGLRGDDV--QLIPEQSLLPLKPRDLQIARSLMSSEILQENYKE 316
M+ + +G+ +D + E L L DL++ LM + L +
Sbjct: 211 ---RMDPDTRVETITRIGVCVEDALERNKWEGGFLELSDHDLKMIDKLMKFKDLASD--- 264
Query: 317 ELSLMVHNGQRAEVEALYFHGYDYLGKYIAK 347
L + ++ E+EA + + L ++ K
Sbjct: 265 -LLFLKKTNKKIEMEAFFSKTSEELRHFLCK 294
>gi|407037581|gb|EKE38703.1| DNA topoisomerase, putative [Entamoeba nuttalli P19]
Length = 293
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 50 FLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQ 109
F+ S R + + A+ F+ + + E +S VT+R ++Y F Q
Sbjct: 50 FVGTSMFIRDHSLTKIAQVFMVLKVIQEATLLNIS----VTKRHIYYL----DKNLFKHQ 101
Query: 110 LQVNRTIQDVIA-LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISG 168
V+ ++ + + H + +VA+ + G + + + + S +I
Sbjct: 102 RVVDEIVKKLSERVFHLPKEDFHVVAAQKSFFCGNITIVRETK----TTQITSEKETIIP 157
Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRL--TEDFVFNQIPSILITAKGYPDIATRFLLH 226
+S ++ +KT A +I+++EK+ +F ++ T F N+ ++ITA G+PD AT++ ++
Sbjct: 158 LISTMKNTQIKTTATHILIIEKYTVFSQIIKTSWFSMNKNNILIITACGFPDSATKYFIN 217
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTF 254
L + + + +VD++P GL I +
Sbjct: 218 LLISSNQQIKLYCMVDFDPFGLDIFNNY 245
>gi|429962600|gb|ELA42144.1| hypothetical protein VICG_00787 [Vittaforma corneae ATCC 50505]
Length = 270
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 74 KVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIV 133
K +++ ++ + + +R LFY DS F +Q VN+ ++ + C + I
Sbjct: 29 KFLQSIHSLIKSGQSMNKRTLFY----DSVPIFKTQNSVNKLVKRYSRVFGCEQRDFNIK 84
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
+S +G+ GR++L N + I+ G ++ D+ + +++K + + +V+EK +
Sbjct: 85 SSLKGIFHGRIILIMKNSKRIE-----YEGKNLIPDMD--DVIEIKHNYKVAMVIEKDTV 137
Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
F R+ + + + KGYP T L + + I L D++P GL I
Sbjct: 138 FSRVESE------RYLTVCGKGYPCQNTVKFLKMIEST---VKIYCLTDFDPYGLHIFL- 187
Query: 254 FKFGSIGMGMEAYRYACNVKWLGLRGDDV---QLIPEQSLLPLKPRDLQIARSLMSSEIL 310
Y+ ++ +GL+ +D+ ++ + P I R SEI
Sbjct: 188 -----------VYKKKIDMVRIGLKIEDILKYKVKKHDCICLNGPDKRMIERLKRYSEIY 236
Query: 311 QENYKEELSLMVHNGQRAEVEALY----FHGYDYLGKYI 345
E+ + G + E+E L+ F ++YL KYI
Sbjct: 237 N-----EVEFIEGLGMKMELEILFNRMDFDIFEYLDKYI 270
>gi|157877047|ref|XP_001686856.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129931|emb|CAJ09238.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 490
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQ-EVIDCSACGSSG----YSISGDLSLLEKLDLKT 180
+R SLGI A+ + L+AG + L+ + E+ID SA GS G YS++ + + +
Sbjct: 169 TRESLGITAAGKSLLAGAITLELCDPVELIDVSAHGSVGITLTYSLAARMVGCRETGVWQ 228
Query: 181 DAR---------YIIVVEK----HAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHR 227
AR ++++EK HA+ Q + + IL+ KGYP +A R L R
Sbjct: 229 AARNGISSSRPYKLVLIEKESVHHAVLQSMMKSGTPRTYSWILLCTKGYPCVAAREWLRR 288
Query: 228 LNRAFPDLPILALVDWNPAGLAILCT 253
++ P L + +VD +P GL I T
Sbjct: 289 VHALQPALQLYIMVDGDPHGLDIALT 314
>gi|50285739|ref|XP_445298.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524602|emb|CAG58204.1| unnamed protein product [Candida glabrata]
Length = 372
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 48/266 (18%)
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS-RFSLGIVASSRGLVAGRLMLQE 148
T R++FY+ + E F SQ V T+ + L + R L I A+ +GL+ +
Sbjct: 117 TSRDIFYR----NVELFKSQRLVVDTVDHIQKALGLTIREDLNITATQKGLIFTAV---- 168
Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLD-------LKTDARYII---VVEKHAIF---- 194
++I S+ G L+ + D K D + I+ V+EK A++
Sbjct: 169 ---DIIINSSDTKKIKITKGKSQLIPQFDSNAFIMVCKDDPQMILKVLVIEKDAVYNTII 225
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTF 254
Q+ TE + I++T KGYPD+ TR LHRL + +L + L D +P G+ I +
Sbjct: 226 QKPTEGY-------IVVTGKGYPDMLTRKFLHRLEQCNSNLQFVILTDPDPHGINIAMKY 278
Query: 255 KFGSIGMGMEAYRYACNVKWLGLRGDDV-QLIPEQS-----LLPLKPRDLQIARSLMSS- 307
+ G ++ Y C L +G + +LI S +LPL RD+++A++++ S
Sbjct: 279 Q----GFTTDSI-YPC--ASLIRKGISILELIDGHSSTIAQVLPLSTRDIKLAQNILFSG 331
Query: 308 -EILQENYKEELSLMVHNGQRAEVEA 332
L N + EL + ++ E+
Sbjct: 332 HSDLYANMRTELQRQLFLTKKGEMNT 357
>gi|302808744|ref|XP_002986066.1| hypothetical protein SELMODRAFT_424976 [Selaginella moellendorffii]
gi|300146214|gb|EFJ12885.1| hypothetical protein SELMODRAFT_424976 [Selaginella moellendorffii]
Length = 339
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 12/105 (11%)
Query: 68 AFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSR 127
A +RV +++++ +L Q K ++R+L+Y P+ Q VN+ + D+ L C+R
Sbjct: 91 AMLRVLQIVQS---LLQQGKHASKRDLYYT----DPD----QATVNQALIDISVRLKCTR 139
Query: 128 FSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
SL +V+ +GL+ G L ++ ++ IDCS C S GY I D +
Sbjct: 140 SSLHVVSVGKGLIMGSLRFKDADR-TIDCSVCKSRGYPIPTDAKM 183
>gi|449708290|gb|EMD47775.1| DNA topoisomerase, putative [Entamoeba histolytica KU27]
Length = 293
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI-ALLHCSRFSLGIVASSRGLVAGRL-ML 146
VT+R ++Y F Q V+ ++ + + H + IVA+ + G + M+
Sbjct: 85 VTKRHIYYL----DKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQKSFFCGNITMV 140
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL--TEDFVFN 204
+E + ++ +S ++ +KT A +I++VEK+ +F ++ T F N
Sbjct: 141 RET-----KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQIIKTSWFSMN 195
Query: 205 QIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
+ ++ITA G+PD AT++ ++ L + + + +VD++P GL I
Sbjct: 196 KNNILIITACGFPDSATKYFINLLISSNQQIKLCCMVDFDPFGLDIF 242
>gi|67478608|ref|XP_654689.1| DNA topoisomerase [Entamoeba histolytica HM-1:IMSS]
gi|56471757|gb|EAL49301.1| DNA topoisomerase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 293
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI-ALLHCSRFSLGIVASSRGLVAGRL-ML 146
VT+R ++Y F Q V+ ++ + + H + IVA+ + G + M+
Sbjct: 85 VTKRHIYYL----DKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQKSFFCGNITMV 140
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL--TEDFVFN 204
+E + ++ +S ++ +KT A +I++VEK+ +F ++ T F N
Sbjct: 141 RET-----KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQIIKTSWFSMN 195
Query: 205 QIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
+ ++ITA G+PD AT++ ++ L + + + +VD++P GL I
Sbjct: 196 KNNILIITACGFPDSATKYFINLLISSNQQIKLCCMVDFDPFGLDIF 242
>gi|145967216|gb|ABP99000.1| meiotic transesterase, partial [Entamoeba histolytica]
Length = 280
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI-ALLHCSRFSLGIVASSRGLVAGRL-ML 146
VT+R ++Y F Q V+ ++ + + H + IVA+ + G + M+
Sbjct: 85 VTKRHIYYL----DKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQKSFFCGNITMV 140
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL--TEDFVFN 204
+E + ++ +S ++ +KT A +I++VEK+ +F ++ T F N
Sbjct: 141 RET-----KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQIIKTSWFSMN 195
Query: 205 QIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
+ ++ITA G+PD AT++ ++ L + + + +VD++P GL I
Sbjct: 196 KNNILIITACGFPDSATKYFINLLISSNQQIKLCCMVDFDPFGLDIF 242
>gi|30578207|gb|AAP35100.1|AF485821_1 Spo11 [Entamoeba histolytica]
Length = 284
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 89 VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI-ALLHCSRFSLGIVASSRGLVAGRL-ML 146
VT+R ++Y F Q V+ ++ + + H + IVA+ + G + M+
Sbjct: 85 VTKRHIYYL----DKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQKSFFCGNITMV 140
Query: 147 QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRL--TEDFVFN 204
+E + ++ +S ++ +KT A +I++VEK+ +F ++ T F N
Sbjct: 141 RET-----KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQIIKTSWFSMN 195
Query: 205 QIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAIL 251
+ ++ITA G+PD AT++ ++ L + + + +VD++P GL I
Sbjct: 196 KNNILIITACGFPDSATKYFINLLISSNQQIKLCCMVDFDPFGLDIF 242
>gi|431894522|gb|ELK04322.1| mRNA export factor [Pteropus alecto]
Length = 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 92 RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQ 151
R+++Y + F +Q V+ + ++ +L R L ++++S+GL+AG L E +
Sbjct: 44 RDIYYT----DNQLFGNQAVVDNIVDNISCMLKVPRRCLHVLSTSKGLIAGNLRYMEEDG 99
Query: 152 EVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSIL 210
++CS + SI + L TDA+++++VEK A FQRL +D N+ P I+
Sbjct: 100 TKVNCSC---TTVSIINTFTYY----LITDAKFLLIVEKDATFQRLLDDNFCNKTSPCIM 152
Query: 211 IT 212
+T
Sbjct: 153 VT 154
>gi|407849011|gb|EKG03878.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi]
Length = 452
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 26/144 (18%)
Query: 185 IIVVEKHAIFQRL--TEDFVFNQIP---SILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+I+VEK + + L E + P + +KGYP A+R LLH+L+R P LPIL
Sbjct: 243 VILVEKESTLRTLVVAEGVLGLGAPLNRCSFLCSKGYPCRASRTLLHKLHRELPQLPILV 302
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACN---------------VKWLGLRGDDVQL 284
LVD +P G+ I TF G G G R +W+G+R
Sbjct: 303 LVDGDPHGMRIALTF-LGLFGGGASTRRRKQKKRPFASAEFISTLLPARWIGVR---PSA 358
Query: 285 IPEQSL--LPLKPRDLQIARSLMS 306
+P Q+ PL D Q+ +M+
Sbjct: 359 LPHQATGRAPLTLLDRQVLSQMMA 382
>gi|70951181|ref|XP_744852.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524972|emb|CAH80607.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 185
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 35/175 (20%)
Query: 176 LDLK--TDARYIIVVEKHAIFQRLTE-DFVFNQIPSILITAKGYPDIATRFLLHRLNRAF 232
+DLK T +Y++++EK +F +L + +F+F P ILITAKG+PDI TR L++ + +
Sbjct: 14 IDLKIPTTVKYVLIIEKETVFFKLLQSNFIFKYGPLILITAKGFPDINTRQLIYEIQKKN 73
Query: 233 PDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGL----RGDDVQLIPEQ 288
L L D++ + I + N++W+ + G + + E
Sbjct: 74 STLKFFCLTDYD--------AYDMDDISIN--------NLQWISIFTPEEGIRKKALKES 117
Query: 289 SLLPLKPRDLQIARSLMSSEILQENYK----------EELSLMVHNGQRAEVEAL 333
L +D++I ++ + L+ N K E++ M +G + E++A+
Sbjct: 118 DFSKLSLKDIRIMDNICTK--LKNNNKFGASETNRWIEQVDNMKKSGIKYEIDAI 170
>gi|449019092|dbj|BAM82494.1| similar to DNA topoisomerase VI subunit A [Cyanidioschyzon merolae
strain 10D]
Length = 446
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 92 RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV--AGRLMLQEP 149
RELFY+L+ F SQ ++ + + ++A SRFSLGI+A SRG V + LQ+
Sbjct: 87 RELFYRLV----PVFDSQQELTQYLDRLLAAARISRFSLGIIAESRGWVFFGSGIQLQKR 142
Query: 150 N----------QEVIDCSACGSSG--YSISGDLSL-LEKLDLKTDAR-----YIIVVEKH 191
+ E + C I D+ L L + R I++VEK
Sbjct: 143 SIENERPRYVQSEAANARLCTPHRGLMPIPDDIVLDPGAYQLVVEPRQDLVVVILIVEKF 202
Query: 192 AIFQRLTEDFVFNQIP--SILITAKGYPDIATRFLLHRLNR----------------AFP 233
+F+ L ++ + +P +IL+T G P +ATR L+ ++ R +P
Sbjct: 203 GVFRCLVDEGFASILPVLTILVTGGGQPSLATRALVAQIARCLEAHHAAFRSTNAPHTYP 262
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAY----RYACNVKWLGLRG---------- 279
I + D++P GL I ++ S+ + + ++ +W+G R
Sbjct: 263 RFDIYVITDYDPYGLCIARQYR-RSLAAALPQFTADSKFTRLPRWIGPRACHLFRARSSR 321
Query: 280 DDVQLI-----PEQSLLPLKP----RDLQIARSLMSSEILQEN--YKEELSLMV 322
+ +L+ +QS L P R L +AR++ + +LQ + EEL M+
Sbjct: 322 ANCELLRAKSEADQSPLMRGPMPSQRALVLARNIFAEAVLQGDSLVAEELHHMI 375
>gi|340057315|emb|CCC51660.1| putative meiosis recombination protein [Trypanosoma vivax Y486]
Length = 425
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 132/315 (41%), Gaps = 69/315 (21%)
Query: 70 VRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFS 129
+V+ V+ + F ++ Q+ T+R+++Y+ ++ + Q + R+ + + + + S
Sbjct: 82 AQVFCVLSSVFGMIQQKLECTERDIYYR---NTSLFPGGQHETRRSTERLCQWMGGAHLS 138
Query: 130 ----------------LGIVASSRGLVAGRLMLQEPNQ-----EVIDCSACGSSGYSISG 168
L I AS + ++ G + P + + + SA + Y I
Sbjct: 139 SSVESSTEKRCYVREDLHIGASGKSILTGNVSFDVPARSPGLRKPLVVSA-NTDAYGILV 197
Query: 169 DLSL-LEKLDLKTDA-------RYIIVVEKHAIFQRLTE-----DFVFNQIPSILITAKG 215
D ++ L + + DA +++VEK + + LT D + S+ + +KG
Sbjct: 198 DTAMGLRGCNFR-DAVGSGGQLSAVVIVEKESTLRTLTVARAALDSDASVCRSVFLCSKG 256
Query: 216 YPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKW- 274
YP A+R LL L+ P +PI+ALVD +P G+ I+ TF MG+ + ++W
Sbjct: 257 YPCRASRMLLRNLHHELPSIPIVALVDGDPHGIRIVLTF------MGLLGGNFNHTLRWD 310
Query: 275 ----------------LGLRGDDVQLIPEQSL--LPLKPRDLQIARSLMSSEILQENYKE 316
+ G +P +S+ PL P D + + +Q +
Sbjct: 311 ENKCGASDTPITQLIPIHWAGAHPSTLPHKSVGRAPLTPHDEGVL-----TRTVQRIEEA 365
Query: 317 ELSLMVHNGQRAEVE 331
+LSL GQ + E
Sbjct: 366 QLSLRSGEGQYSAYE 380
>gi|449328985|gb|AGE95260.1| meiotic recombination protein rec12 [Encephalitozoon cuniculi]
Length = 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVT--QRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
KS +R+++++ I QE +T +RE+FY F +Q V R + +
Sbjct: 26 KSRTLATRLRLYEII-----IEMQELGITRNEREIFYM----DVNVFRTQSVVRRLVSSI 76
Query: 120 IALLHCSRFSLGIVASSRGLVAGRL-MLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
+ L S+ LG+ + +G+ GRL ++ +++ S+ G I + E L
Sbjct: 77 ASELQISKHDLGVRNTLKGIFIGRLGFVRHHGLGMVEMSSKGGCPQLIPDMSDIAEVL-- 134
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQ-IPSIL-ITAKGYPDIATRFLLHRLNRAFPDLP 236
D + +VVEK + QR+ + + + IL + KGYP T LL +
Sbjct: 135 -CDYKKTVVVEKDTVLQRIASEIEREKCLEEILFVCGKGYPCKNTVLLLKMIEHK---TA 190
Query: 237 ILALVDWNPAGLAILCTFKFGS 258
+ L D +P G+ I C +K+GS
Sbjct: 191 VAGLFDLDPFGIHIFCIYKYGS 212
>gi|19074189|ref|NP_584795.1| similarity to MEIOTIC RECOMBINATION PROTEIN REC12 [Encephalitozoon
cuniculi GB-M1]
gi|74621943|sp|Q8SVS9.1|SPO11_ENCCU RecName: Full=Probable meiosis-specific protein SPO11 homolog
gi|19068831|emb|CAD25299.1| similarity to MEIOTIC RECOMBINATION PROTEIN REC12 [Encephalitozoon
cuniculi GB-M1]
Length = 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVT--QRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
KS +R+++++ I QE +T +RE+FY F +Q V R + +
Sbjct: 26 KSRTLATRLRLYEII-----IEMQELGITRNEREIFYM----DVNVFRTQSVVRRLVSSI 76
Query: 120 IALLHCSRFSLGIVASSRGLVAGRL-MLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
+ L S+ LG+ + +G+ GRL ++ +++ S+ G I + E L
Sbjct: 77 ASELQISKHDLGVRNTLKGIFIGRLGFVRHHGLGMVEMSSKGGCPQLIPDMSDIAEVL-- 134
Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQ-IPSIL-ITAKGYPDIATRFLLHRLNRAFPDLP 236
D + +VVEK + QR+ + + + IL + KGYP T LL +
Sbjct: 135 -CDYKKTVVVEKDTVLQRIASEIEREKCLEEILFVCGKGYPCKNTVLLLKMIEHK---TA 190
Query: 237 ILALVDWNPAGLAILCTFKFGS 258
+ L D +P G+ I C +K+GS
Sbjct: 191 VAGLFDLDPFGIHIFCIYKYGS 212
>gi|407407968|gb|EKF31569.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi
marinkellei]
Length = 452
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 32/163 (19%)
Query: 185 IIVVEKHAIFQRLT--EDFVFNQIP---SILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+I+VEK + + L +D + P + +KGYP A+R LLH+L+R P LPI
Sbjct: 243 LILVEKESTLRTLVVGKDALDLGAPLSRCFFLCSKGYPCRASRTLLHKLHRELPQLPIFV 302
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACN---------------VKWLGLRGD---- 280
LVD +P G+ I TF G G G R V+W+G+R
Sbjct: 303 LVDGDPHGMRIALTF-LGLFGGGASTRRRKQQKRPFSSAEFISTLLPVRWIGVRPSALPH 361
Query: 281 ------DVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEE 317
+ L+ Q LL + R ++ A SL+ E+ EE
Sbjct: 362 QATGRAPLTLLDRQVLLQMTARVVE-ALSLLEDEVGDATCSEE 403
>gi|449017249|dbj|BAM80651.1| similar to DNA topoisomerase VI subunit A [Cyanidioschyzon merolae
strain 10D]
Length = 446
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 68/294 (23%)
Query: 92 RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV--AGRLMLQEP 149
RELFY+L+ F SQ ++ + + ++A SRFSLGI+A SRG V + LQ+
Sbjct: 87 RELFYRLV----PVFDSQQELTQYLDRLLAAARISRFSLGIIAESRGWVFFGSGIQLQKR 142
Query: 150 N----------QEVIDCSACGSSG--YSISGDLSL-LEKLDLKTDAR-----YIIVVEKH 191
+ E + C I D+ L L + R I++VEK
Sbjct: 143 SIENERPRYVQSEAANARLCTPHRGLMPIPDDIVLDPGAYQLVVEPRQDLVVVILIVEKF 202
Query: 192 AIFQRLTEDFVFNQIP--SILITAKGYPDIATRFLLHRLNR----------------AFP 233
+F+ L ++ + +P +IL+T G P +ATR L+ ++ R +P
Sbjct: 203 GVFRCLVDEGFASILPVLTILVTGGGQPSLATRALVAQIARCLEAHHAAFRSTNAPHTYP 262
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAY----RYACNVKWLGLRG---------- 279
I + D++P GL I ++ S+ + + ++ +W+G R
Sbjct: 263 RFDIYVITDYDPYGLCIARQYR-RSLAAALPQFTADSKFTRLPRWIGPRACHLFRARSSR 321
Query: 280 DDVQLI-----PEQSLLPLKP----RDLQIARSLMSSEILQEN--YKEELSLMV 322
+ +L+ +QS L P R L +AR++ + +LQ + EEL M+
Sbjct: 322 ANCELLRAKSEADQSPLMRGPMPSQRALVLARNIFAEAVLQGDSLVAEELHNMI 375
>gi|50307459|ref|XP_453708.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642842|emb|CAH00804.1| KLLA0D14575p [Kluyveromyces lactis]
Length = 401
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 90/177 (50%), Gaps = 18/177 (10%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
+I +++ T R+++Y + E F SQ V Q + A+ + + +V++ +GL+
Sbjct: 136 RIKTKKNTTTVRDIYY----GNIELFESQQMVEMLFQRIEAMFNVEKLFFNVVSTQKGLI 191
Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTE- 199
LQ +Q + + C Y G++ + + LK +IV+EK AIFQ+L +
Sbjct: 192 YSGPRLQIGSQ--LFHAECQLVPYD-QGEMIVQQNQQLK-----VIVLEKDAIFQQLIQC 243
Query: 200 -DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP-DLPILALVDWNPAGLAILCTF 254
+ + + I++T KGYPD +R LLH+L+ + ++ D +P G+ I+ +
Sbjct: 244 QEMIKD---WIIVTGKGYPDHLSRELLHKLDLSLQGNVQFHIFTDSDPYGIDIVTKY 297
>gi|358382356|gb|EHK20028.1| hypothetical protein TRIVIDRAFT_48006 [Trichoderma virens Gv29-8]
Length = 403
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 23/253 (9%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A F R+ +++ L T+R +FY+ F Q V+ + ++ + L+
Sbjct: 77 ATKFARILLILQLAHDALVSGTVSTKRHIFYQ----HQGLFVRQRTVDELVDNLASALNV 132
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVI-----DCSACGSSGYSISGDLSLLEKLDLKT 180
R L IVASS+G+ G L + + VI D + Y +S L L+ L+
Sbjct: 133 QRDDLNIVASSKGVFLGPLSICLQDNTVIGPAVGDAVRIFTRNYYLS--LFFLQPGPLQP 190
Query: 181 DARYIIVVEKHAIFQRLTEDFVF-NQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
A + F L FV N + T GYPD+ T + + P +PI
Sbjct: 191 LAAKPSDGSCISFFSVL---FVLANVLRWSRTTHNGYPDMLTCSFIQLIRFNCPQIPIFV 247
Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPL----KP 295
L D++P GL IL ++ S + E A ++WLG++ D L+ +S L + P
Sbjct: 248 LADYDPDGLNILRHYRLKSEFVSQEF--TAPAIRWLGIKSQD--LLERKSRLDMLILPSP 303
Query: 296 RDLQIARSLMSSE 308
+LQ S S E
Sbjct: 304 DNLQPPDSQSSEE 316
>gi|444314273|ref|XP_004177794.1| hypothetical protein TBLA_0A04820 [Tetrapisispora blattae CBS 6284]
gi|387510833|emb|CCH58275.1| hypothetical protein TBLA_0A04820 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 78 TCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVN---RTIQDVIALLHCSRFSLGIVA 134
T ++ LS + T R++FY D+ E + +Q V IQ +L S+ L IVA
Sbjct: 109 TIYKRLSINRISTIRDVFY----DNKEIYRTQRSVENGLEIIQKTFSL--PSKDMLNIVA 162
Query: 135 SSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLE--------KLDLKTDARYII 186
+ +GL + I+ S G + L+ KL+ + I+
Sbjct: 163 AQKGLCFSPVF--------IEVSTSGKTEQMNDLSTQLIPYMNSKSSVKLNTAEKIKRIV 214
Query: 187 VVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATR-FL--LHRLNRAFPDLPILALVD 242
V+EK A+F L + +I +I+IT KGYPD TR FL L R N ++ + L D
Sbjct: 215 VLEKEAVFNSLGKYIQERKIQDTIIITGKGYPDTLTRTFLEVLQRSNASYEQISWTILTD 274
Query: 243 WNPAGLAILCTF 254
+P G+ I C +
Sbjct: 275 ADPHGIDIACKY 286
>gi|440295525|gb|ELP88438.1| meiotic recombination protein SPO11, putative [Entamoeba invadens
IP1]
Length = 340
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 31/278 (11%)
Query: 62 KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
K ++ + +V V++ + + +T+R ++Y + FT Q V+R I+ +
Sbjct: 61 KRSSLREIAQVCVVLKAIHEAVQSGISITKRHIYYL----EKDLFTCQNTVDRIIKRLSK 116
Query: 122 -LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
+ + + ++A+ +G G + + NQ S+ + + L T
Sbjct: 117 YVFKAPKEAFNVIAAPKGFFNGNVGFGK-NQ--------SSATTRLIPTVPFLANNSANT 167
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
I+VVEK+ +F+++ F + +++T G+PD AT + ++ P+
Sbjct: 168 HIAGILVVEKYTVFEKIVSSHWFASMKGEILVVTGCGFPDTATCVFVSTISTT-TKCPVY 226
Query: 239 ALVDWNPAGLAILCTF--KFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPR 296
LVD++P GL I ++ K G + + + Y+ V I LPL
Sbjct: 227 CLVDFDPCGLDIFASYVEKLGDVVVKLLLYKQVKGV---------FDQIKNTHKLPLNAG 277
Query: 297 DLQIARSL-MSSEILQENYKEELSLMVHNGQRAEVEAL 333
D + R L + +E + K + L++ N + E+EA
Sbjct: 278 D--VNRLLRIRAETNDDEVKNVVELLLENNCKIEMEAF 313
>gi|391874466|gb|EIT83348.1| catalytic subunit of the meiotic double strand break transesterase
[Aspergillus oryzae 3.042]
Length = 389
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 46/289 (15%)
Query: 72 VWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLG 131
V++V+ + V++R+++Y P F +Q V+ + D+ + R +L
Sbjct: 99 VFRVLAVVADAIGTGVVVSKRDIYYS----DPACFGTQRIVDTIVDDLAYTIGVDRSALN 154
Query: 132 IVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
+ A+++GLVAG L + E +D S +L++ +DA +++++EK
Sbjct: 155 VEAAAKGLVAGYCSLLTKSGETMDVQLPAKDCLVPSSQDD--RELNI-SDASWVLIIEKE 211
Query: 192 A---IFQRLTEDFVFNQIPS-------ILI----TAKGYPDIATRFLLHRLNRAFPDLPI 237
+ +TE + ++ PS I+I KG+ ++ + L
Sbjct: 212 VQPLPYDIITETHLVHR-PSTADSQEVIIILERPQEKGFSSLSDKALR-----------F 259
Query: 238 LALVDWNPAGLAILCTFKFGSIGMGMEAYRY--ACNVKWLGLRGDD-VQLIP---EQSLL 291
LVD +P G+AI+ +K+GS+ + R C + WLGLR D V P +++L
Sbjct: 260 YGLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPC-LWWLGLRTSDVVSGAPSNDDRALN 318
Query: 292 PLKPRDLQIARSLMS------SEILQENYKEELSLMVHNGQRAEVEALY 334
L RD +++S +E + ++ EL M+ +AE+E LY
Sbjct: 319 RLTVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEILY 367
>gi|342184364|emb|CCC93846.1| conserved hypothetical protein, partial [Trypanosoma congolense
IL3000]
Length = 319
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 185 IIVVEKHAIFQRLTE------DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPIL 238
+++VEK + + L D +F+ + + +KGYP A+R LH L+ P++PI+
Sbjct: 97 VVIVEKESTLKTLLTAISARGDKLFSD-QCVYLCSKGYPCRASRQFLHNLHHELPEVPII 155
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGD 280
ALVD +P GL I TF MG+ R C LRG+
Sbjct: 156 ALVDGDPHGLRIALTF------MGLFGERPTCLGTSRVLRGN 191
>gi|254584991|ref|XP_002498063.1| ZYRO0G01364p [Zygosaccharomyces rouxii]
gi|238940957|emb|CAR29130.1| ZYRO0G01364p [Zygosaccharomyces rouxii]
Length = 371
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 46 VSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY 105
+S F H + N+ + + + +++T + L+ T R+LFY + E
Sbjct: 72 ISLKFPDHGLYSSVAAHQNSNRIAI-MLNLLQTIQECLTSSTVKTNRDLFYS----NVEL 126
Query: 106 FTSQLQVNRTIQDVIALLHCS--RFSLGIVASSRGLVAGRL---MLQEPNQEVIDCSACG 160
+ Q+ V+R I + L + R +L ++ + +GLV +L + ++E I+
Sbjct: 127 YGKQVTVDRWINTIAQSLELTNARDNLNVIPAQKGLVFTTQEIRILTKGSEERIN--PYH 184
Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS-----ILITAKG 215
SS SL + + + ++V+EK A++ +L D ++ PS I++T KG
Sbjct: 185 SSLIPHMDQNSLCQIVPGRNATTRLLVLEKEAVYNQLVNDVQYS--PSYYDDCIIVTGKG 242
Query: 216 YPDIATRFLLHRLNRAFPDLPILAL-VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKW 274
YPD TR LH+L + + + D +P G+ I + ++ + C
Sbjct: 243 YPDFLTRLFLHKLQVSTTAIERWEIYTDADPYGVDIAMKY--------VQNVKEPCRCNK 294
Query: 275 LGLRGDDV-QLIPEQ----SLLPLKPRDLQIARSLM 305
L RG + QL+ Q LP+ RD +A ++
Sbjct: 295 LVHRGVFLFQLMSNQRQQVQYLPMTQRDTAVATRIL 330
>gi|71421569|ref|XP_811832.1| meiosis recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70876541|gb|EAN89981.1| meiosis recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 452
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 185 IIVVEKHAIFQRL--TEDFVFNQIP---SILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
+I+VEK + + L E + P + +KGYP A+R LLH+L+ P LPIL
Sbjct: 243 VILVEKESTLRTLVVAEGVLGLGAPLNRCSFLCSKGYPCRASRTLLHKLHCELPQLPILV 302
Query: 240 LVDWNPAGLAILCTF--KFGSIG------------MGMEAYRYACNVKWLGLRGDDVQLI 285
LVD +P G+ I TF FG + E +W+G+R +
Sbjct: 303 LVDGDPHGMRIALTFLGLFGGVASTRRRKQKKRPFASAEFISTLLPARWIGVR---PSAL 359
Query: 286 PEQSL--LPLKPRDLQIARSLMS 306
P Q+ PL P D ++ +M+
Sbjct: 360 PHQATGRAPLTPLDRRVLSQMMA 382
>gi|401826082|ref|XP_003887135.1| DNA topoisomerase VI subunit A [Encephalitozoon hellem ATCC 50504]
gi|392998293|gb|AFM98154.1| DNA topoisomerase VI subunit A [Encephalitozoon hellem ATCC 50504]
Length = 299
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 91 QRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
+RE+FY F +Q V R I ++ L SR L + + +G G L
Sbjct: 50 EREIFYM----DVGVFKTQSAVKRMISSIVLELEVSRHELRVKNTLKGTFIGNLTF---- 101
Query: 151 QEVIDCSACG----SSGYSISG---DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVF 203
I C + SSG SI D++ ++ ++ + + ++VVEK I QR+ +
Sbjct: 102 ---IKCGSFSTIEISSGDSIPQLIPDMTGVK--EVLCNYKRVLVVEKDTILQRIASEIRR 156
Query: 204 NQIPS--ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGS 258
+ +L+ +GYP T LL L I L D++P G+ I C +K+GS
Sbjct: 157 EKRLEGMLLVCGRGYPCRNTMLLLKMLEHR---TAISGLFDFDPFGIHIFCVYKYGS 210
>gi|325181612|emb|CCA16062.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 77
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 189 EKHAIF--QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
+ H +F Q ED ++P +L+T +G+PD++TR + L+ +P+L L D NP
Sbjct: 5 QYHILFMIQICREDSFIERLPCVLVTGRGFPDLSTRIFVRNLSDIL-QIPVLGLCDCNPF 63
Query: 247 GLAILCTFK 255
GL+I+ +F+
Sbjct: 64 GLSIMVSFR 72
>gi|449470686|ref|XP_004153047.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 79
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 142 GRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDF 201
G L E + DC +S + I + + E +D+ + A YI+VVEK ++FQRL D
Sbjct: 2 GWLRFSEAGRR-FDCLKKPNSAHFIP--VQVEEVIDITSAADYILVVEKESVFQRLANDR 58
Query: 202 VFNQIPSILITAKGYPDIATR 222
++ I+IT +GYPD++TR
Sbjct: 59 FCSRNRCIVITGRGYPDVSTR 79
>gi|367017828|ref|XP_003683412.1| hypothetical protein TDEL_0H03420 [Torulaspora delbrueckii]
gi|359751076|emb|CCE94201.1| hypothetical protein TDEL_0H03420 [Torulaspora delbrueckii]
Length = 350
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 22/197 (11%)
Query: 63 SNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIAL 122
++AAK ++ +M T +S + T R+++Y + E + Q +V + +
Sbjct: 79 TSAAKKIAVLFSLMRTIQVTVSTGQIRTIRDVYYT----NVELYGDQRKVETGLCSIAKN 134
Query: 123 LH-CSRFSLGIVASSRGLVAG--RLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK 179
LH SR SL I+ + +GL +++Q QE + + S ++ + + ++ ++
Sbjct: 135 LHLSSRDSLNILPAQKGLCYSPFDIVVQTNGQENLIPAKTSSMIPYLAQNST--ARIVMR 192
Query: 180 TDARY-IIVVEKHAIFQRL-----TEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
DA +IV+EK A++ +L ED +F IT KGYPD TR L+RL +
Sbjct: 193 GDANLKLIVLEKEAVYNKLVGANTAEDTIF-------ITGKGYPDFLTRLFLNRLQQNIC 245
Query: 234 DLPILALVDWNPAGLAI 250
L D +P G+ I
Sbjct: 246 ILDWRIYTDADPHGIDI 262
>gi|145967208|gb|ABP98996.1| meiotic transesterase, partial [Trypanosoma cruzi]
Length = 175
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 211 ITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTF--KFGSIG-------- 260
+ +KGYP A+R LLH+L+ P LPIL LVD +P G+ I TF FG +
Sbjct: 32 LCSKGYPCRASRTLLHKLHCELPQLPILVLVDGDPHGMRIALTFLGLFGGVASTRRRKQK 91
Query: 261 ----MGMEAYRYACNVKWLGLRGDDVQLIPEQSL--LPLKPRDLQIARSLMSSEILQENY 314
E +W+G+R +P Q+ PL P D ++ +M+ +
Sbjct: 92 KRPFASAEFISTLXPARWIGVRPSA---LPHQATGRAPLTPLDRRVLSQMMARVV----- 143
Query: 315 KEELSLM 321
E LSL+
Sbjct: 144 -EALSLL 149
>gi|410083990|ref|XP_003959572.1| hypothetical protein KAFR_0K00820 [Kazachstania africana CBS 2517]
gi|372466164|emb|CCF60437.1| hypothetical protein KAFR_0K00820 [Kazachstania africana CBS 2517]
Length = 338
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 14/125 (11%)
Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
D II++EK A++ +L ++ + + S++IT KGYPD TR +++++ D+ I
Sbjct: 190 DFDKIIILEKEAVYSKLVQNKLM--LNSLIITGKGYPDHLTRKFINKVSHLCSDIEI--F 245
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQI 300
VD +P G+ I + M Y+ + + +D +L+ L PRD I
Sbjct: 246 VDADPDGICIALNYMKDC---PMAQYKGITVAALINTKDED-------NLMKLTPRDSTI 295
Query: 301 ARSLM 305
+R+L+
Sbjct: 296 SRNLL 300
>gi|367004314|ref|XP_003686890.1| hypothetical protein TPHA_0H02530 [Tetrapisispora phaffii CBS 4417]
gi|357525192|emb|CCE64456.1| hypothetical protein TPHA_0H02530 [Tetrapisispora phaffii CBS 4417]
Length = 380
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 42/256 (16%)
Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
Y+ +++Q N +++ SR L I+ + +GL L+ NQ+ + + +
Sbjct: 141 YWLNKIQKNLSLK--------SRNELNIIPAQKGLCYIPFQLRIVNQKTGNYTFVAKNES 192
Query: 165 SISGDLS-----LLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS--ILITAKGYP 217
++ + ++E+++L ++ IIVVEK A++ + N P I++T KGYP
Sbjct: 193 TLIPHFTKDSNFIIEEIELPNISK-IIVVEKEAVYDKFIRYHCSNINPEKMIIVTGKGYP 251
Query: 218 DIATRFLLHRLN--RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWL 275
D TR L++L +A + VD +P G++I + + Y+C + L
Sbjct: 252 DFLTRLFLNKLQTLKALDESSWEIYVDADPYGISIATKYIISTSDQ-----MYSC--RKL 304
Query: 276 GLRGDDVQLIPEQ-------SLLPLKPRD----LQIARSLMSSEILQENY------KEEL 318
+G + + LL L RD +++ L ++E L N+ K E+
Sbjct: 305 IHKGARISHLIHNLNQSKHIQLLNLTTRDITYLMKMISRLFNNEALSHNHSSSFSIKTEI 364
Query: 319 SLMVHNGQRAEVEALY 334
+ ++ E+ ALY
Sbjct: 365 QRQLFFAKKGEMNALY 380
>gi|261332800|emb|CBH15795.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 453
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 185 IIVVEKHAIFQRLTE-------DFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPI 237
++VVEK + L + + + N+ + +KGYP A+R L L+R P+LPI
Sbjct: 240 LVVVEKESTLHTLADVKSALGSESISNRC--AYLCSKGYPCRASRLFLRSLHRELPELPI 297
Query: 238 LALVDWNPAGLAILCTF 254
L LVD +P GL I TF
Sbjct: 298 LVLVDGDPHGLRIALTF 314
>gi|383139990|gb|AFG51276.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
Length = 75
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLG 342
IPEQ LP+ +D++ + L+ + ++++ + +EL+LMV Q+AE++AL G+ YL
Sbjct: 2 IPEQCRLPMTDQDIKTGKDLLEEDFVKKSPGWVDELNLMVKTKQKAEIQALSSFGFQYLS 61
Query: 343 K-YIAKKIVQADYI 355
+ Y+ K+ Q D+I
Sbjct: 62 EVYLPLKLQQRDWI 75
>gi|323354751|gb|EGA86585.1| Spo11p [Saccharomyces cerevisiae VL3]
Length = 385
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 43/302 (14%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
N+K S + T + + CT A + VME L K
Sbjct: 73 NKKRKGDTSSPDIHTTLDFPLNGPHLCTHQFKLKRCAILLNLLKVVMEK----LPLGKNT 128
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH--CSRFSLGIVASSRGLVAGRLML- 146
T R++FY + E F Q V + + DVI R SL I+ + +GLV +
Sbjct: 129 TVRDIFY----SNVELFQRQANVVQWL-DVIRFNFKLSPRKSLNIIPAQKGLVYSPFPID 183
Query: 147 ---------QEPN---QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
EP Q + C + + L T I++VEK A+F
Sbjct: 184 IYDNILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGT-----TSMCNIVIVEKEAVF 238
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL--PILALVDWNPAGLAILC 252
+L ++ ++LIT KG+PD TR L +L + +L D +P G++I
Sbjct: 239 TKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCSIFTDADPYGISIAL 298
Query: 253 TFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKPRDLQIARSLM 305
+ + E Y C + + G+R V + LL L RD +A++L+
Sbjct: 299 NYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQRDYSLAKNLI 353
Query: 306 SS 307
+S
Sbjct: 354 AS 355
>gi|6321765|ref|NP_011841.1| Spo11p [Saccharomyces cerevisiae S288c]
gi|134746|sp|P23179.1|SPO11_YEAST RecName: Full=Meiosis-specific protein SPO11; AltName:
Full=Sporulation-specific protein 11
gi|172660|gb|AAA65532.1| SPO11 protein [Saccharomyces cerevisiae]
gi|2289892|gb|AAB65075.1| Sporulation protein [Saccharomyces cerevisiae]
gi|45269563|gb|AAS56162.1| YHL022C [Saccharomyces cerevisiae]
gi|151944178|gb|EDN62470.1| endodeoxyribonuclease [Saccharomyces cerevisiae YJM789]
gi|285809876|tpg|DAA06663.1| TPA: Spo11p [Saccharomyces cerevisiae S288c]
Length = 398
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 117/304 (38%), Gaps = 47/304 (15%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
N+K S + T + + CT A + VME L K
Sbjct: 73 NKKKKGDTSSPDIHTTLDFPLNGPHLCTHQFKLKRCAILLNLLKVVMEK----LPLGKNT 128
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH--CSRFSLGIVASSRGLVAGRLML- 146
T R++FY + E F Q V + + DVI R SL I+ + +GLV +
Sbjct: 129 TVRDIFY----SNVELFQRQANVVQWL-DVIRFNFKLSPRKSLNIIPAQKGLVYSPFPID 183
Query: 147 ---------QEPN---QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
EP Q + C + + L T I++VEK A+F
Sbjct: 184 IYDNILTCENEPKMQKQTIFPGKPCLIPFFQDDAVIKLGT-----TSMCNIVIVEKEAVF 238
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL----NRAFPDLPILALVDWNPAGLAI 250
+L ++ ++LIT KG+PD TR L +L ++ D I D +P G++I
Sbjct: 239 TKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCSIFT--DADPYGISI 296
Query: 251 LCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKPRDLQIARS 303
+ + E Y C + + G+R V + LL L RD +A++
Sbjct: 297 ALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQRDYSLAKN 351
Query: 304 LMSS 307
L++S
Sbjct: 352 LIAS 355
>gi|190405760|gb|EDV09027.1| meiosis-specific protein SPO11 [Saccharomyces cerevisiae RM11-1a]
gi|256274400|gb|EEU09304.1| Spo11p [Saccharomyces cerevisiae JAY291]
gi|259147003|emb|CAY80258.1| Spo11p [Saccharomyces cerevisiae EC1118]
gi|323337401|gb|EGA78653.1| Spo11p [Saccharomyces cerevisiae Vin13]
gi|365765317|gb|EHN06828.1| Spo11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 398
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 43/302 (14%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
N+K S + T + + CT A + VME L K
Sbjct: 73 NKKRKGDTSSPDIHTTLDFPLNGPHLCTHQFKLKRCAILLNLLKVVMEK----LPLGKNT 128
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH--CSRFSLGIVASSRGLVAGRLML- 146
T R++FY + E F Q V + + DVI R SL I+ + +GLV +
Sbjct: 129 TVRDIFY----SNVELFQRQANVVQWL-DVIRFNFKLSPRKSLNIIPAQKGLVYSPFPID 183
Query: 147 ---------QEPN---QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
EP Q + C + + L T I++VEK A+F
Sbjct: 184 IYDNILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGT-----TSMCNIVIVEKEAVF 238
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL--PILALVDWNPAGLAILC 252
+L ++ ++LIT KG+PD TR L +L + +L D +P G++I
Sbjct: 239 TKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCSIFTDADPYGISIAL 298
Query: 253 TFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKPRDLQIARSLM 305
+ + E Y C + + G+R V + LL L RD +A++L+
Sbjct: 299 NYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQRDYSLAKNLI 353
Query: 306 SS 307
+S
Sbjct: 354 AS 355
>gi|71747804|ref|XP_822957.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832625|gb|EAN78129.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 453
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILIT-------AKGYPDIATRFLLHRLNRAFPDLPI 237
++VVEK + L + V + + S I+ +KGYP A+R L L+R P+LPI
Sbjct: 240 LVVVEKESTLHTLAD--VKSALGSESISDRCAYLCSKGYPCRASRLFLRSLHRELPELPI 297
Query: 238 LALVDWNPAGLAILCTF 254
L LVD +P GL I TF
Sbjct: 298 LVLVDGDPHGLRIALTF 314
>gi|359416814|ref|ZP_09209083.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358032828|gb|EHK01464.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 81 QILSQEKRVTQRELFYKLLCDSP----EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASS 136
+++ + + RE++Y+L P F Q + N + D+ R L + A
Sbjct: 12 ELVDSGRTASIREVYYQLKHSVPGLDENTFEDQDESNNVVVDIETATGAIREDLHLFAEP 71
Query: 137 RGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLK-TDARYIIVVEKHAIFQ 195
+G + G + + + + ID + GS+G +I S+++ L+ + +A +I+VVE A+
Sbjct: 72 KGRLFGPIKINDSG-DTIDGMSMGSAGMAIP---SIVDHLEFEENNADFILVVETSAMVN 127
Query: 196 RLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
RL E+ + +I+I G P R L++ +
Sbjct: 128 RLVEEDFHEEHNAIIIGTGGQPARGARRLINMM 160
>gi|145967214|gb|ABP98999.1| meiotic transesterase, partial [Trypanosoma brucei]
Length = 367
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSI-----LITAKGYPDIATRFLLHRLNRAFPDLPILA 239
++VVEK + L + SI + +KGYP A+R L L+R P+LPIL
Sbjct: 154 LVVVEKESTLHTLADVKSALGSESISDRCAYLCSKGYPCRASRLFLRSLHRELPELPILV 213
Query: 240 LVDWNPAGLAILCTF 254
LVD +P GL I TF
Sbjct: 214 LVDGDPHGLRIALTF 228
>gi|83771493|dbj|BAE61625.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 384
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
Query: 103 PEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS 162
P F +Q V+ + D+ + R +L + A+++GLVAG L + E +D
Sbjct: 121 PACFGTQRIVDTIVDDLAYTIGVDRSALNVEAAAKGLVAGYCSLLTKSGETMDVQLPAKD 180
Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHA---IFQRLTEDFVFNQIPS-------ILI- 211
S +L++ +DA +++++EK + +TE + ++ PS I+I
Sbjct: 181 CLVPSSQDD--RELNI-SDASWVLIIEKEVQPLPYDLITETHLVHR-PSTADSQEVIIIL 236
Query: 212 ---TAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
KG+ ++ + L LVD +P G+AI+ +K+GS+ + R
Sbjct: 237 ERPQEKGFSSLSDKALR-----------FYGLVDNDPDGMAIMSIYKYGSMAHTNQNGRL 285
Query: 269 --ACNVKWLGLRGDD-VQLIP---EQSLLPLKPRDLQIARSLMS------SEILQENYKE 316
C + WLGLR D V P +++L L RD +++S +E + ++
Sbjct: 286 NIPC-LWWLGLRTSDVVSGAPSNDDRALNRLTVRDRTKIVTMLSNNPVWAAEGPELEWRA 344
Query: 317 ELSLMVHNGQRAEVEALY 334
EL M+ +AE+E LY
Sbjct: 345 ELQQMLMLNLKAEIEILY 362
>gi|349578522|dbj|GAA23687.1| K7_Spo11p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 398
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 117/304 (38%), Gaps = 47/304 (15%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
N+K S + T + + CT A + VME L K
Sbjct: 73 NKKKKGDTSSPDIHTTLDFPLNGPHLCTHQFKLKRCAILLNLLKVVMEK----LPLGKNT 128
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH--CSRFSLGIVASSRGLVAGRLML- 146
T R++FY + E F Q V + + DVI R SL I+ + +GLV +
Sbjct: 129 TVRDIFY----SNVELFQRQANVVQWL-DVIRFNFKLSPRKSLNIIPAQKGLVYSPFPID 183
Query: 147 ---------QEPN---QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
EP Q + C + + L T I++VEK A+F
Sbjct: 184 IYDNILTCENEPKMQKQTIFPGKPCLIPYFQDDAVIKLGT-----TSMCNIVIVEKEAVF 238
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL----NRAFPDLPILALVDWNPAGLAI 250
+L ++ ++LIT KG+PD TR L +L ++ D I D +P G++I
Sbjct: 239 TKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCSIFT--DADPYGISI 296
Query: 251 LCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKPRDLQIARS 303
+ + E Y C + + G+R V + LL L RD +A++
Sbjct: 297 ALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQRDYSLAKN 351
Query: 304 LMSS 307
L++S
Sbjct: 352 LIAS 355
>gi|361068647|gb|AEW08635.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139982|gb|AFG51272.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139984|gb|AFG51273.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139986|gb|AFG51274.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139988|gb|AFG51275.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139992|gb|AFG51277.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139994|gb|AFG51278.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139996|gb|AFG51279.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139998|gb|AFG51280.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140000|gb|AFG51281.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140002|gb|AFG51282.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140004|gb|AFG51283.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140006|gb|AFG51284.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140008|gb|AFG51285.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140010|gb|AFG51286.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140012|gb|AFG51287.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140014|gb|AFG51288.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
Length = 75
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLG 342
IPEQ LP+ +D++ + L+ + ++++ + +EL+LMV +AE++AL G+ YL
Sbjct: 2 IPEQCRLPMTDQDIKTGKDLLEEDFVKKSPGWVDELNLMVKTKHKAEIQALSSFGFQYLS 61
Query: 343 K-YIAKKIVQADYI 355
+ Y+ K+ Q D+I
Sbjct: 62 EVYLPLKLQQRDWI 75
>gi|255547896|ref|XP_002515005.1| hypothetical protein RCOM_1082090 [Ricinus communis]
gi|223546056|gb|EEF47559.1| hypothetical protein RCOM_1082090 [Ricinus communis]
Length = 58
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 27/29 (93%)
Query: 1 VRARIEVSVINFLKILNSPDPAISDLPLI 29
V ARIEV+V+NFL+IL SPDPAISDLPL+
Sbjct: 28 VIARIEVAVLNFLRILTSPDPAISDLPLV 56
>gi|323304701|gb|EGA58462.1| Spo11p [Saccharomyces cerevisiae FostersB]
Length = 280
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL--PILALVD 242
I++VEK A+F +L ++ ++LIT KG+PD TR L +L + +L D
Sbjct: 111 IVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCSIFTD 170
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKP 295
+P G++I + + E Y C + + G+R V + LL L
Sbjct: 171 ADPYGISIALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQ 225
Query: 296 RDLQIARSLMSS 307
RD +A++L++S
Sbjct: 226 RDYSLAKNLIAS 237
>gi|359415981|ref|ZP_09208360.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358033656|gb|EHK02182.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 128
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 160 GSSGYSISGDLSLLEKLDLK-TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
GS+G +I S+++ L+ + +A +I+VVE A+ RL E+ + +I+I G P
Sbjct: 2 GSAGMAIP---SIVDHLEFEENNADFILVVETSAMVNRLVEEDFHEEHNAIIIGTGGQPA 58
Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC 270
R L++ ++ +LP+ D +P G I K GS+ + ++ R A
Sbjct: 59 RGARRLINMMHNEL-ELPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDRLAT 109
>gi|397573885|gb|EJK48919.1| hypothetical protein THAOC_32245 [Thalassiosira oceanica]
Length = 413
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP--DLPILALVD 242
+IVVEKH IFQ+L + I +ILI + GYP T+ L L A D + D
Sbjct: 227 VIVVEKHCIFQQLCANGFDKSIKAILICSGGYPSKNTKAWLSFLKAALSVRDGNCGVVHD 286
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIAR 302
NP G+A+ +F G A Y +V+ +GL + ++ L P+ ++ AR
Sbjct: 287 LNPCGIALGHSFSTNKF-PGYNA--YITDVRIIGL---------QTRVMSLFPKVVEYAR 334
Query: 303 SLMSSEILQENYK 315
S S + + + K
Sbjct: 335 SDKSKQFSEHDKK 347
>gi|392298968|gb|EIW10063.1| Spo11p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 280
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL----NRAFPDLPILAL 240
I++VEK A+F +L ++ ++LIT KG+PD TR L +L ++ D I
Sbjct: 111 IVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCSIFT- 169
Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPL 293
D +P G++I + + E Y C + + G+R V + LL L
Sbjct: 170 -DADPYGISIALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSL 223
Query: 294 KPRDLQIARSLMSS 307
RD +A++L++S
Sbjct: 224 NQRDYSLAKNLIAS 237
>gi|323333306|gb|EGA74703.1| Spo11p [Saccharomyces cerevisiae AWRI796]
Length = 267
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL--PILALVD 242
I++VEK A+F +L ++ ++LIT KG+PD TR L +L + +L D
Sbjct: 111 IVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCSIFTD 170
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKP 295
+P G++I + + E Y C + + G+R V + LL L
Sbjct: 171 ADPYGISIALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQ 225
Query: 296 RDLQIARSLMSS 307
RD +A++L++S
Sbjct: 226 RDYSLAKNLIAS 237
>gi|365760425|gb|EHN02147.1| Spo11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 42/246 (17%)
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS-RFSLGIVASSRGLV----- 140
K T R++FY + E F Q V + + + + S R SL I+ + +GL+
Sbjct: 177 KNTTVRDIFY----SNVELFQRQANVVQWLDIIRFNFNLSPRKSLNIIPAQKGLIYSPFP 232
Query: 141 --------AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
G+ Q Q V C + D +++E L+T +++VEK A
Sbjct: 233 IYVHDKIMTGKDEFQVQKQTVSHGKPCLIPFFQ---DDAIIE---LETSNCNLVIVEKEA 286
Query: 193 IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR--AFPDLPILALVDWNPAGLAI 250
+F +L ++ ++LIT KG+PD TR L +L + + D +P G++I
Sbjct: 287 VFTKLVSNYHRLNANTVLITGKGFPDFLTRLFLKKLEQDCSSLISSCSIFTDADPYGISI 346
Query: 251 LCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQS---------LLPLKPRDLQIA 301
+ S A N + RG + + Q+ LL L RD +A
Sbjct: 347 ALNYINSSANA-------AYNCAMVDYRGIYITQVLAQNNRLGSKAIQLLNLSQRDCTLA 399
Query: 302 RSLMSS 307
++L+ S
Sbjct: 400 KNLIVS 405
>gi|297826165|ref|XP_002880965.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326804|gb|EFH57224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 2 RARIEVSVINFLKILNSPDPAISDLPL 28
RARIEVSV+N L+ILNSPDPAISDL L
Sbjct: 21 RARIEVSVLNLLRILNSPDPAISDLSL 47
>gi|323308850|gb|EGA62086.1| Spo11p [Saccharomyces cerevisiae FostersO]
Length = 280
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL--PILALVD 242
I++VEK A+F +L ++ ++LIT KG+PD TR L +L + L D
Sbjct: 111 IVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSXLISDCSIFTD 170
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKP 295
+P G++I + + E Y C + + G+R V + LL L
Sbjct: 171 ADPYGISIALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQ 225
Query: 296 RDLQIARSLMSS 307
RD +A++L++S
Sbjct: 226 RDYSLAKNLIAS 237
>gi|403413712|emb|CCM00412.1| predicted protein [Fibroporia radiculosa]
Length = 213
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 61 TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
T+ ++AK+ +++KVM+ +++ +T+R+++Y + + F SQ V++ I+D+
Sbjct: 116 TRGSSAKSIAQLFKVMDLAHNAIAEAVPITKRDIYYHDV----KLFKSQAVVDKLIEDLA 171
Query: 121 ALLHCSRFSLGIVASSRGLVAG 142
A R L I ASS+GLV+G
Sbjct: 172 ATFDIRRGDLFIRASSKGLVSG 193
>gi|39794780|gb|AAH64120.1| Spo11 protein [Mus musculus]
Length = 101
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 261 MGMEAYRYAC-NVKWLGLRGDDVQL--IPEQSLLPLKPRDLQIARSLMSSEIL--QENYK 315
M EA+ ++WLGL D+Q IP+ SL+PL D S++ + Q +K
Sbjct: 1 MSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKRPYITYQPLWK 60
Query: 316 EELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADYI 355
+EL +M + +AE++AL DYL + Y+ K+ +I
Sbjct: 61 KELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 101
>gi|145967206|gb|ABP98995.1| meiotic transesterase, partial [Trichomonas vaginalis]
Length = 73
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 209 ILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
ILIT +G PD TR+ + L+ + +PI+ L D + G+ I+ FK+GS+ + +
Sbjct: 9 ILITPRGVPDYNTRYFVRLLDDSL-SIPIVGLFDGDAYGIFIMHLFKYGSMSAAQDGHAM 67
Query: 269 AC 270
AC
Sbjct: 68 AC 69
>gi|397643696|gb|EJK76026.1| hypothetical protein THAOC_02232 [Thalassiosira oceanica]
Length = 1033
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP--DLPILALVD 242
+IVVEKH IFQ+L + I +ILI + GYP T+ L L AF D + D
Sbjct: 937 VIVVEKHCIFQQLCANGFDKTIKAILICSGGYPSKNTKAWLSFLKAAFSVRDGNCGVVHD 996
Query: 243 WNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLR 278
NP G A+ F G A Y +V+ +GL+
Sbjct: 997 LNPCGYALGHAFSTNKF-PGYNA--YITDVRVIGLQ 1029
>gi|401838787|gb|EJT42241.1| SPO11-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 397
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 41/246 (16%)
Query: 87 KRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS-RFSLGIVASSRGLV----- 140
K T R++FY + E F Q V + + + + S R SL I+ + +GL+
Sbjct: 125 KNTTVRDIFY----SNVELFQRQANVVQWLDIIRFNFNLSPRKSLNIIPAQKGLIYSPFP 180
Query: 141 --------AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHA 192
G+ Q Q V C + D +++E L+ ++ +++VEK A
Sbjct: 181 IYVHDKIMTGKDEFQIQKQTVSHGKPCLIPFFQ---DDAIIE-LETTSNCN-LVIVEKEA 235
Query: 193 IFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR--AFPDLPILALVDWNPAGLAI 250
+F +L ++ ++LIT KG+PD TR L +L + + D +P G++I
Sbjct: 236 VFTKLVSNYHRLNANTVLITGKGFPDFLTRLFLKKLEQDCSSLISSCSIFTDADPYGISI 295
Query: 251 LCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQS---------LLPLKPRDLQIA 301
+ S A N + RG + + Q+ LL L RD +A
Sbjct: 296 ALNYINSSANA-------AYNCAMVDYRGIYITQVLAQNNRLGSKAIQLLNLSQRDCTLA 348
Query: 302 RSLMSS 307
++L+ S
Sbjct: 349 KNLIVS 354
>gi|366994448|ref|XP_003676988.1| hypothetical protein NCAS_0F01490 [Naumovozyma castellii CBS 4309]
gi|342302856|emb|CCC70633.1| hypothetical protein NCAS_0F01490 [Naumovozyma castellii CBS 4309]
Length = 363
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 185 IIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDW- 243
++V+EK AIF +L +QI LIT KGYPD TR L + F + ++ +W
Sbjct: 213 VLVLEKEAIFSKLVSSRNSDQI---LITGKGYPDFLTRKFL----KLFHESEKESIKNWD 265
Query: 244 -----NPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQ-LIPEQSLLPLKPRD 297
+P G+ I TF I M Y C L L +++ L LL L RD
Sbjct: 266 IITDADPHGVNI--TF----IYMQTNTYLNYCGATLLQLINLNLKHLSSATQLLSLDQRD 319
Query: 298 LQIARSLMSSEILQE-----NYKEELSLMVHNGQRAEVEALY 334
+ + ++L+ +QE K L + ++ E+ ALY
Sbjct: 320 VSLTKTLLGRVSMQEVAQASKLKVALQRQMFFQKKGEMNALY 361
>gi|343957979|emb|CCC41972.1| meiosis-specific sporulation protein SPO11, partial [Rhizophagus
irregularis DAOM 181602]
Length = 115
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 67 KAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCS 126
K FV + ++++ C ++L Q T+R+++YK + F + V+ I ++
Sbjct: 40 KTFVIMIRILDICHELLIQNVTATKRDIYYK----DVKLFGNSQTVDLVIDELACFFQIP 95
Query: 127 RFSLGIVASSRGLVAGRLML 146
R L ++AS++GLVAG L +
Sbjct: 96 RSCLNVIASAKGLVAGSLKI 115
>gi|258570943|ref|XP_002544275.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904545|gb|EEP78946.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 220
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 66 AKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC 125
A AF V +++ + + + ++R+++Y P YF SQ V+ I D+ +
Sbjct: 87 AWAFGVVVRILGHISEAIHGQFVASKRDIYYL----DPAYFGSQRLVDTYIDDIAYTIGV 142
Query: 126 SRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYI 185
R +L + G++ R+ + +LDL + R++
Sbjct: 143 GRPALHV-----GILIPRV--------------------------DEIAELDL-SGVRWV 170
Query: 186 IVVEKHAIFQRL-TEDFVFNQIPS--ILITAKGYPDIATRFLL 225
+V+EK A+F RL T ++ + +LIT KGYPD++TR L
Sbjct: 171 LVIEKEAVFHRLVTSNYHKSSTAGGGMLITGKGYPDLSTRAFL 213
>gi|145910313|gb|ABP98812.1| SPO11 meiotic recombination protein [Oryzias latipes]
Length = 84
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 214 KGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI 259
KG PD+ +R ++ +L +PI ALVD +P G I+C +K+GS+
Sbjct: 1 KGVPDVNSRLMVKKLWDTL-QIPIFALVDADPHGFEIMCIYKYGSV 45
>gi|242208775|ref|XP_002470237.1| predicted protein [Postia placenta Mad-698-R]
gi|220730687|gb|EED84540.1| predicted protein [Postia placenta Mad-698-R]
Length = 612
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 54 SFCTRSLTKSNAAKA-----FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTS 108
SF R+L A+ F +++K+++ + L T+R+++YK + F S
Sbjct: 497 SFAVRTLRFPQKARGASIVPFAQLFKIVDHMHEALLHGVPTTKRDIYYKDV----RLFKS 552
Query: 109 QLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG 142
Q V+R + DV A L R L + ASS+GL+A
Sbjct: 553 QAVVDRLVDDVAATLDVGRADLFVRASSKGLIAA 586
>gi|449015897|dbj|BAM79299.1| similar to DNA topoisomerase VI subunit A [Cyanidioschyzon merolae
strain 10D]
Length = 361
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 183 RYIIVVEKHAIFQRLTED--------FVFNQIPSI-LITAKGYPDIATRFLLHRLNRAFP 233
R ++VVEK F+ L + Q+ + +I+ KGYPD AT+ L+ L +
Sbjct: 189 RAVLVVEKETTFRALLRGIHDPPGKFLRYAQLNRVAMISGKGYPDRATKVLVRYLAKT-E 247
Query: 234 DLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPL 293
+P+ L D +P G+AI + + +G+ + N + LR + + + SLL
Sbjct: 248 GIPVFLLTDCDPNGIAIALQYDGATERIGVPLHGPE-NAGFAALR---LLVDHDHSLLK- 302
Query: 294 KPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEAL 333
Q+ R + + + + + L+ M G ++E+E+L
Sbjct: 303 -----QLQRRITCMDGIGASLQPPLAWMAATGYKSEIESL 337
>gi|384489947|gb|EIE81169.1| hypothetical protein RO3G_05874 [Rhizopus delemar RA 99-880]
Length = 285
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 67/243 (27%)
Query: 5 IEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSH------SFCTR 58
IE ++++ ++ L+ +P +P RKS + R TD S + S+ TR
Sbjct: 67 IEQTILDVVQSLSMGEPI--QVPASTRKSRSKRKK----TDSSSSQQQNKENGVASYQTR 120
Query: 59 --SLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTI 116
L+ + +A R V+ ++ L+ + VT+R++FY+ + E F +Q
Sbjct: 121 RLKLSSERSTRALARYLSVLRMIYEALAYKIVVTKRDMFYRDV----ELFHTQ------- 169
Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSS--GYSISGDL--SL 172
+ A+S+GLV G ++++ N +++DC + + + G L
Sbjct: 170 --------------SVSAASKGLVFGSIVIKLKNNKMLDCMTRINKLDCHDVQGLLIPPA 215
Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR---FLLHRLN 229
E +++ AR +I++EK KGYPD+ATR F N
Sbjct: 216 SEIAEIQCKARCMIIIEKE---------------------GKGYPDLATRQFAFAFDVFN 254
Query: 230 RAF 232
AF
Sbjct: 255 LAF 257
>gi|365989648|ref|XP_003671654.1| hypothetical protein NDAI_0H02370 [Naumovozyma dairenensis CBS 421]
gi|343770427|emb|CCD26411.1| hypothetical protein NDAI_0H02370 [Naumovozyma dairenensis CBS 421]
Length = 381
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 36/167 (21%)
Query: 185 IIVVEKHAIFQRLTEDF----VFNQIPSILITAKGYPDIATRFLLHRLNRAFPDL--PIL 238
++++EK A+F ++ ++ + ILIT KGYPD TR ++ +
Sbjct: 225 VLILEKEAVFNKIVSNYSTCCTNCNVKDILITGKGYPDFLTRNFINLFYKCCSSFIGQWH 284
Query: 239 ALVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDD-VQLIPEQS-------- 289
L D +P G+ I AY YA + + G ++LI S
Sbjct: 285 ILTDADPHGVNI--------------AYMYAKTIPRIDYMGIPLLELIRPNSKDASNSAQ 330
Query: 290 LLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQRAEVEALYFH 336
LLPLK RD+ + +++ + EN + + + QR L+FH
Sbjct: 331 LLPLKQRDISLLLAMVQRVVTTENISK---VFIRELQR----QLFFH 370
>gi|255716898|ref|XP_002554730.1| KLTH0F12320p [Lachancea thermotolerans]
gi|238936113|emb|CAR24293.1| KLTH0F12320p [Lachancea thermotolerans CBS 6340]
Length = 382
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 82 ILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHC--------SRFSLGIV 133
++S KRV QR+L K C + F +++ + + V L+ R L +V
Sbjct: 108 LISLMKRV-QRQLDLKETCTIRDVFYLNVELYKNQRTVTEWLNAISKAFELPHRDMLRVV 166
Query: 134 ASSRGLVAGRLMLQEPNQEVIDCSAC----GSSGYSISGDLSLLEKLDLKTDARYIIVVE 189
A+ +GL + L N ++ + S +G S +++ ++V+E
Sbjct: 167 AAQKGLCFTPIDLHHGNSMIMKRQKSLIPFMDANTSFTGIWSEIDR---------VVVLE 217
Query: 190 KHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL---VDWNPA 246
K A+F L ++ + + ++++T KGYPD TR L +L + P P +A D +P
Sbjct: 218 KDAVFNTLVDNILVS-ANALIVTGKGYPDWRTRHFLDKLMLSCP--PSVAFEVYTDSDPY 274
Query: 247 GLAI 250
G+ I
Sbjct: 275 GIDI 278
>gi|331242402|ref|XP_003333847.1| hypothetical protein PGTG_15270 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312837|gb|EFP89428.1| hypothetical protein PGTG_15270 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 414
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 55/228 (24%)
Query: 134 ASSRGLVAGRLML--QEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKH 191
A RG+ G L + + N V + G+S ++ + ++++ + R I++VEK
Sbjct: 222 AGGRGIFHGDLKIVSKVKNDRV---TVDGASISTLIPPMETVKEVIPGQNVRMILIVEKE 278
Query: 192 AIFQRLTEDFVFNQI---PSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGL 248
A+ L + + N P I+I+ KG PD+ATR L ++L +P
Sbjct: 279 AVLSALVHNGINNHPDLSPCIVISGKGNPDLATRSLCYKLAS-------------DP--- 322
Query: 249 AILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSE 308
G+ R GL LL + +D ++A+ +MSSE
Sbjct: 323 -------------GLIQRRVPIFQVHRGL------------LLEMTEKDFKVAKDIMSSE 357
Query: 309 ILQENYKEELSLMVHNGQRAEV------EALYFHGYDYLGKYIAKKIV 350
+ E +K+E+ +V + + + L G L Y+ +K++
Sbjct: 358 RMSEAHKQEIRGLVTGKTKGSIAIINSSKNLQGRGGQKLISYLKRKVM 405
>gi|444730821|gb|ELW71194.1| mRNA export factor [Tupaia chinensis]
Length = 504
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 92 RELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQ 151
R+++Y DS + F +Q V+ I D+ +L R SL I+++S+GL+AG L E +
Sbjct: 38 RDIYYT---DS-QLFGNQTVVDSIINDISCMLKVPRRSLHILSTSKGLIAGNLGYIEEDG 93
Query: 152 EVIDCSACGSSGYSI 166
++C+ CG++ S
Sbjct: 94 TKVNCT-CGATSMSF 107
>gi|207344826|gb|EDZ71836.1| YHL022Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 271
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 79/211 (37%), Gaps = 29/211 (13%)
Query: 30 NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
N+K S + T + + CT A + VME L K
Sbjct: 73 NKKRKGDTSSPDIHTTLDFPLNGPHLCTHQFKLKRCAILLNLLKVVMEK----LPLGKNT 128
Query: 90 TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH--CSRFSLGIVASSRGLVAGRLML- 146
T R++FY + E F Q V + + DVI R SL I+ + +GLV +
Sbjct: 129 TVRDIFY----SNVELFQRQANVVQWL-DVIRFNFKLSPRKSLNIIPAQKGLVYSPFPID 183
Query: 147 ---------QEPN---QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
EP Q + C + + L T I++VEK A+F
Sbjct: 184 IYDNILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGT-----TSICNIVIVEKEAVF 238
Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLL 225
+L ++ ++LIT KG+PD TR L
Sbjct: 239 TKLVNNYHKLSTNTMLITGKGFPDFLTRLFL 269
>gi|449470594|ref|XP_004153001.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 150
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 81 QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVA 134
Q+L + + ++R+++Y P FT Q V+R I D+ LL CSR +L +V
Sbjct: 88 QLLGENRHSSKRDIYYM----HPSIFTDQSVVDRAINDICILLQCSRHNLNVVG 137
>gi|70944412|ref|XP_742140.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520951|emb|CAH81729.1| hypothetical protein PC000785.04.0 [Plasmodium chabaudi chabaudi]
Length = 118
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 60 LTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
++K+N + R++ ++E + ++ T R++FY +P+ F SQ NRTI +
Sbjct: 31 ISKNNIIE-ITRLYYIIEIILKNINGNIYTTLRQIFYT----NPQLFISQNISNRTIGKL 85
Query: 120 IALLHCSRFSLGIVASSRGLVAGRLMLQEPN 150
++ R L I S +G++ G L+L+E N
Sbjct: 86 TQIIKKPREILNIYNSPKGIIRGNLLLKERN 116
>gi|344302621|gb|EGW32895.1| hypothetical protein SPAPADRAFT_54879 [Spathaspora passalidarum
NRRL Y-27907]
Length = 321
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 34/182 (18%)
Query: 185 IIVVEKHAIFQR----LTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
IIV+EK A+FQ L F ++IT KG+PD T L L +F L I
Sbjct: 159 IIVIEKDAVFQSFCQYLKSHNTFQNF--VVITGKGFPDRLTMRFLAWLTESFSSLTI-GF 215
Query: 241 VDWNPAGLAILCTF-KFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
D + GL I + K GS + + N++ + LP+ RD++
Sbjct: 216 FDSDVYGLRICQQYQKCGSNLIFGGVFLLETNIR---------------NHLPITTRDIK 260
Query: 300 IARSLMSS---------EILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIV 350
+ +L++ + L E YK EL+ + ++AE+ L F L YI +K
Sbjct: 261 LMMNLLNELSEKGNQEKDNLFETYKRELTRGLTLFRKAEMNVLKFAT--ELNYYINEKSR 318
Query: 351 QA 352
Q+
Sbjct: 319 QS 320
>gi|150865082|ref|XP_001384151.2| hypothetical protein PICST_31531 [Scheffersomyces stipitis CBS
6054]
gi|149386338|gb|ABN66122.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 414
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 84 SQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI--ALLHCSRFSLGIVASSRGLVA 141
+ +K T R+++Y+ D + Q N + ++ +L + I S +GLV
Sbjct: 131 NSKKSTTIRDIYYQ---DVEAFHWKQRYCNEILHSIVVDSLGLSLEHNFSIYPSQKGLVY 187
Query: 142 GRLMLQEPNQEVIDCSACGSSGYSISGDL----SLLEKLDLKTDARY-IIVVEKHAIFQR 196
G +Q + S YS L + E + ++ Y I+++EK A+FQ
Sbjct: 188 GDFAIQSNEGTIFQMS------YSEEPVLIPLHTKFEHILPNEESHYAIVILEKEAVFQS 241
Query: 197 ----------LTEDFVFNQIPSILITAKGYPDIATRFLLHRL-NRAFPDLPILALVDWNP 245
L ++FV + + I++T KG+PD T+ ++ L N AF + L D +
Sbjct: 242 FCYYIKTRYTLKDNFVPDNL--IVVTGKGFPDNLTKKFVNILANTAFTNSVTLGFFDSDV 299
Query: 246 AGLAILCTFK 255
G+ I ++
Sbjct: 300 YGINICKNYQ 309
>gi|260950111|ref|XP_002619352.1| hypothetical protein CLUG_00511 [Clavispora lusitaniae ATCC 42720]
gi|238846924|gb|EEQ36388.1| hypothetical protein CLUG_00511 [Clavispora lusitaniae ATCC 42720]
Length = 339
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 11/205 (5%)
Query: 56 CTRSLTKS-NAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNR 114
C R + ++ + + F +VM L + T R+++YK D + Q N
Sbjct: 29 CHREMAETEHQSMKFAATVRVMNILIDQLQNRQVSTMRDIYYK---DVTLFKGRQAHSNN 85
Query: 115 TIQDVIALLHCS-RFSLGIVASSRGLVAGR--LMLQEPNQEVIDCSACGSSGYSISGDLS 171
+ + L+ S + LG+ + +G++ + + Q+ + C + S
Sbjct: 86 VLDAIANSLNVSLQSDLGVYPTPKGVIWSNNPIEITVGEQKKMSFDPCNEPLLICHRETS 145
Query: 172 LLEKLDLKTDARYIIVVEKHAIFQRLT--EDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
E L + D ++V EK AI + + + IL T KG+PD AT L L
Sbjct: 146 --ENLSVVGDVDMVVVFEKEAILKSFMCFVKKIATGVKLILATGKGFPDRATLSFLGGLQ 203
Query: 230 RAFPDLPILALVDWNPAGLAILCTF 254
P P++ VD + GL I ++
Sbjct: 204 ACLPSTPMVYFVDSDVYGLQIFWSY 228
>gi|336314731|ref|ZP_08569647.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Rheinheimera sp. A13L]
gi|335881030|gb|EGM78913.1| PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing
protein [Rheinheimera sp. A13L]
Length = 791
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
T ++ NR Q ++ +L+ +V + G AG L+LQE + + D + G +
Sbjct: 395 TELVRANRN-QSMLGILYLDLDGFKLVNDTLGHHAGDLLLQEVAKRISDLTRAGDVATRV 453
Query: 167 SGDLSLLEKLDLKTDARYIIVVEK--HAIFQRLT-EDFVFNQIPSILITAKGYPDIATRF 223
GD +L D+ + + V EK H I Q ++ +D + N SI I YPD AT +
Sbjct: 454 GGDEFVLVVPDIHHPSDCLRVAEKILHIIGQDISLQDNIVNVSASIGIAC--YPDDATSY 511
>gi|344232668|gb|EGV64541.1| DNA topoisomerase IV, alpha subunit [Candida tenuis ATCC 10573]
Length = 355
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPS----ILITAKGYPDIATRFLLH 226
S++EK+ R +++VEK AIF+ L + +T KG+PD+ T+ +
Sbjct: 170 SVIEKI--HPHIRSVVIVEKDAIFRSLVSCIKTQGQEKHKGILFVTGKGFPDLLTKSFIW 227
Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRY 268
L A LPI +D + G+ I +++ + G+ E + +
Sbjct: 228 HL--ACSGLPIYGFMDSDIYGILIFKSYREFNKGVATERFTF 267
>gi|242208773|ref|XP_002470236.1| predicted protein [Postia placenta Mad-698-R]
gi|220730686|gb|EED84539.1| predicted protein [Postia placenta Mad-698-R]
Length = 128
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 269 ACNVKWLGLRGDDVQLI--PEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLMVHNGQ 326
A +KWLG+ ++ I + L+P+ D + A +++ L + +++EL M+HN +
Sbjct: 10 ARKIKWLGIYTTELAGIGLSKDELIPINKHDEKKALTMLRRPNLPKRWRKELQHMLHNRR 69
Query: 327 RAEVEAL 333
+AE+E L
Sbjct: 70 KAEIEVL 76
>gi|333907659|ref|YP_004481245.1| signal transduction histidine kinase regulating citrate/malate
metabolism [Marinomonas posidonica IVIA-Po-181]
gi|333477665|gb|AEF54326.1| signal transduction histidine kinase regulating citrate/malate
metabolism [Marinomonas posidonica IVIA-Po-181]
Length = 547
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 106 FTSQLQVNR-TIQDVIALLHCSRFSLGIVA-----------------SSRGLVAGRLMLQ 147
FTS +++ T++ +AL+ + +L ++A S RGL R+M
Sbjct: 7 FTSMKRISTMTLKSYLALITVTTITLIVIAATLVFGYVLRSAYLDNISQRGLELARVMAH 66
Query: 148 EPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEK------HAIFQRLTEDF 201
+ +VI+ + G +IS + S +E +TDA +I+VV K H I +R+ + F
Sbjct: 67 --DDKVIEALHISNQGQAISLE-SYIESKRQQTDASFIVVVNKAALRLSHPIPERVGKPF 123
Query: 202 VFNQIPSILITAKGYPDIA 220
+ + I L K Y ++A
Sbjct: 124 IGDDIYPALQHGKSYTNVA 142
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,180,906,872
Number of Sequences: 23463169
Number of extensions: 201963379
Number of successful extensions: 461053
Number of sequences better than 100.0: 774
Number of HSP's better than 100.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 339
Number of HSP's that attempted gapping in prelim test: 458739
Number of HSP's gapped (non-prelim): 816
length of query: 355
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 212
effective length of database: 9,003,962,200
effective search space: 1908839986400
effective search space used: 1908839986400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)