BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037694
         (355 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9M4A1|SPO12_ARATH Meiotic recombination protein SPO11-2 OS=Arabidopsis thaliana
           GN=SPO11-2 PE=1 SV=1
          Length = 383

 Score =  587 bits (1513), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 273/354 (77%), Positives = 315/354 (88%)

Query: 2   RARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLT 61
           RARIEVSV+N L+ILNSPDPAISDL LINRK SNS +++G+LTDVS+IFLS SF   SLT
Sbjct: 30  RARIEVSVLNLLRILNSPDPAISDLSLINRKRSNSCINKGILTDVSYIFLSTSFTKSSLT 89

Query: 62  KSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIA 121
            +  AKAFVRVWKVME CFQIL QEKRVTQRELFYKLLCDSP+YF+SQ++VNR++QDV+A
Sbjct: 90  NAKTAKAFVRVWKVMEICFQILLQEKRVTQRELFYKLLCDSPDYFSSQIEVNRSVQDVVA 149

Query: 122 LLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTD 181
           LL CSR+SLGI+ASSRGLVAGRL LQEP +E +DCSACGSSG++I+GDL+LL+   ++TD
Sbjct: 150 LLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFAITGDLNLLDNTIMRTD 209

Query: 182 ARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALV 241
           ARYII+VEKHAIF RL ED VFN IP + ITAKGYPDIATRF LHR++  FPDLPIL LV
Sbjct: 210 ARYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATRFFLHRMSTTFPDLPILVLV 269

Query: 242 DWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIA 301
           DWNPAGLAILCTFKFGSIGMG+EAYRYACNVKW+GLRGDD+ LIPE+SL+PLKP+D QIA
Sbjct: 270 DWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNLIPEESLVPLKPKDSQIA 329

Query: 302 RSLMSSEILQENYKEELSLMVHNGQRAEVEALYFHGYDYLGKYIAKKIVQADYI 355
           +SL+SS+ILQENY EELSLMV  G+RAE+EALY HGY+YLGKYIA KIVQ  YI
Sbjct: 330 KSLLSSKILQENYIEELSLMVQTGKRAEIEALYCHGYNYLGKYIATKIVQGKYI 383


>sp|Q9LZ03|TOP6A_ARATH DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana GN=TOP6A PE=1
           SV=1
          Length = 427

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 201/361 (55%), Gaps = 20/361 (5%)

Query: 1   VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
           V+  IE  ++   + + + D     +P  +R +SN    Q  + ++  I L      R  
Sbjct: 81  VQTEIETVIVQIARSILAGDGFSFSVP--SRAASN----QLYVPELDRIVLKDKSTLRPF 134

Query: 61  TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
              ++ +      +++    Q+  +   VT+R+LFY  +    + F  Q Q +  + DV 
Sbjct: 135 ASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVS 190

Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKT 180
            +L C+R SL ++A+ +G+V GRL+  + N ++IDC+  G  G +I  ++  +   D+++
Sbjct: 191 CMLGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQS 247

Query: 181 DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILAL 240
           DA +I++VEK A + RL ED  +N+ P I++TAKG PD+ATR  L ++      LP+LAL
Sbjct: 248 DAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLAL 306

Query: 241 VDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ--LIPEQSLLPLKPRD 297
           VD +P GL IL  +  GS  M  ++      ++KWLG+R  D+    IPEQ  LP+  +D
Sbjct: 307 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 366

Query: 298 LQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKIVQADY 354
           ++  + ++  + +++N  + EEL+LMV   Q+AE++AL   G+ YL + Y+  K+ Q D+
Sbjct: 367 IKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDW 426

Query: 355 I 355
           +
Sbjct: 427 L 427


>sp|Q9Y5K1|SPO11_HUMAN Meiotic recombination protein SPO11 OS=Homo sapiens GN=SPO11 PE=2
           SV=1
          Length = 396

 Score =  172 bits (437), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 182/312 (58%), Gaps = 18/312 (5%)

Query: 54  SFCTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQL 110
           S CT    KS++ K+   F  + K++   ++++      T+R+++Y    DS + F +Q 
Sbjct: 93  SHCTTRKIKSDSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYY---TDS-QLFGNQT 148

Query: 111 QVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDL 170
            V+  I D+  +L  SR SL I+++S+GL+AG L   E +   ++C+ CG++  ++  ++
Sbjct: 149 VVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNI 207

Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQI-PSILITAKGYPDIATRFLLHRLN 229
             +   +L TDA+++++VEK A FQRL +D   N++ P I+IT KG PD+ TR L+ +L 
Sbjct: 208 QGIR--NLVTDAKFVLIVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLW 265

Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IP 286
             F  +P+  LVD +P G+ I+C +K+GS+ M  EA+      ++WLGL   D++   +P
Sbjct: 266 DTF-HVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVP 324

Query: 287 EQSLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK- 343
           + SL+PL  RD     S++    +  Q  +++E+ +M  +  +AE++AL F   DYL + 
Sbjct: 325 KDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRV 384

Query: 344 YIAKKIVQADYI 355
           Y+  K+    +I
Sbjct: 385 YLPNKLKFGGWI 396


>sp|Q9WTK8|SPO11_MOUSE Meiotic recombination protein SPO11 OS=Mus musculus GN=Spo11 PE=2
           SV=2
          Length = 396

 Score =  166 bits (421), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 18/304 (5%)

Query: 56  CTRSLTKSNAAKA---FVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQV 112
           CT    +S++ K+   F  + KV+   ++++  +   T+R+++Y    DS + F +Q  V
Sbjct: 95  CTTRKIRSDSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYY---TDS-QLFGNQAAV 150

Query: 113 NRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSL 172
           +  I D+  +L   R SL ++++S+GL+AG L   E +   + C+ C ++  ++  ++  
Sbjct: 151 DSAIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQG 209

Query: 173 LEKLDLKTDARYIIVVEKHAIFQRLTED-FVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
           ++ L   TDA+++++VEK A FQRL +D F     P I++T KG PD+ TR L+ +L   
Sbjct: 210 MQHL--ITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDT 267

Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQL--IPEQ 288
           F  +P+  LVD +P G+ I+C +K+GS+ M  EA+      ++WLGL   D+Q   IP+ 
Sbjct: 268 F-HIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKD 326

Query: 289 SLLPLKPRDLQIARSLMSSEIL--QENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YI 345
           SL+PL   D     S++    +  Q  +K+EL +M  +  +AE++AL     DYL + Y+
Sbjct: 327 SLIPLTKHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 386

Query: 346 AKKI 349
             K+
Sbjct: 387 PNKL 390


>sp|Q9M4A2|SPO11_ARATH Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana
           GN=SPO11-1 PE=1 SV=1
          Length = 362

 Score =  147 bits (372), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 152/279 (54%), Gaps = 21/279 (7%)

Query: 81  QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLV 140
           Q+L + +  ++R+++Y      P  F +Q  V+R I D+  L  CSR++L +V+   GLV
Sbjct: 88  QLLQENRHASKRDIYYM----HPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVGNGLV 143

Query: 141 AGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTED 200
            G L  +E  ++  DC    ++ Y +   +  +E  D+ + A YI+VVEK  +FQRL  D
Sbjct: 144 MGWLKFREAGRK-FDCLNSLNTAYPVPVLVEEVE--DIVSLAEYILVVEKETVFQRLAND 200

Query: 201 FVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIG 260
                   I+IT +GYPD++TR  L  L      LP+  LVD +P G  IL T++FGS+ 
Sbjct: 201 MFCKTNRCIVITGRGYPDVSTRRFLRLLMEKL-HLPVHCLVDCDPYGFEILATYRFGSMQ 259

Query: 261 MG--MEAYRYACNVKWLGLRGDDVQL--IPEQSLLPLKPRDLQ-----IARSLMSSEILQ 311
           M   +E+ R A ++KWLG    D ++  +P+Q LLPL   D +     + R  +  E+ Q
Sbjct: 260 MAYDIESLR-APDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQ 318

Query: 312 ENYKEELSLMVHNGQRAEVEALYFHGYDYLGK-YIAKKI 349
             ++ EL  M+  G + E+EAL  H   +L + YI  KI
Sbjct: 319 --WRLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKI 355


>sp|P40384|REC12_SCHPO Meiotic recombination protein rec12 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=rec12 PE=1 SV=2
          Length = 345

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 171/336 (50%), Gaps = 26/336 (7%)

Query: 1   VRARIEVSVINFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSL 60
           VR+ IE  V +F++ L+ P     ++ L  RK ++   S     +        SF     
Sbjct: 10  VRSWIEQFVHDFVEQLSKPTKDSVNVALKRRKHNSWNGSLDSKANERQKVKVFSFPRNET 69

Query: 61  TKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVI 120
           T         ++++V++   + +  +  +T+R+++Y+ +    + F  Q  V+  + D+ 
Sbjct: 70  T-------IAQLFRVLDCVHEAVISDTVITKRDIYYRDV----DLFKRQTVVDELLGDIS 118

Query: 121 ALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSA-CGSSGYSISGDLSLLEKLDLK 179
             + CSR  L + AS++GLV G + +   N  VI  +     S + IS          + 
Sbjct: 119 NTIGCSRSDLNVEASAKGLVFGSIHIALENGTVITATKPLLISHHRISS---------IT 169

Query: 180 TDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILA 239
           + A++++V+EK A+FQ LTE+ + +   +I++TAKG+PD+ TR  L +L +A PD     
Sbjct: 170 STAKWVLVIEKEAVFQTLTEEALAD---TIIVTAKGFPDLMTRKFLVKLAKALPDAKFFG 226

Query: 240 LVDWNPAGLAILCTFKFGSIGMGMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQ 299
           + DW+P GL I   FK+GS     E +    N++ LG   +D+    ++  L L  RD++
Sbjct: 227 IFDWDPHGLCIYSCFKYGSNAYSHEPHSQLRNLQLLGPLYEDIFNKNQEFSLKLNKRDIK 286

Query: 300 IARSLMSSEILQEN--YKEELSLMVHNGQRAEVEAL 333
           +  +L+  E  Q+    +E+L  M+   ++AE++A+
Sbjct: 287 MITTLLQFEGFQKEPVVREQLQRMLFIQKKAEIQAI 322


>sp|O05208|TOP6A_SULSH Type 2 DNA topoisomerase 6 subunit A OS=Sulfolobus shibatae
           GN=top6A PE=1 SV=1
          Length = 389

 Score =  122 bits (305), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 37/373 (9%)

Query: 10  INFLKILNSPDPAISDLPLINRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAF 69
           +N ++ L   +P + ++P+  R  SN+   +     +           R+    N AK F
Sbjct: 26  LNLVEQLKKGEPLVMEIPM--RTLSNAIYDEKRKLLLL----GEKKLRRNFLDLNEAKRF 79

Query: 70  VRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPE---------YFTSQLQVNRTI 116
           ++   +    +  L  ++  T R+L+Y+    LL  S E          +  Q + +  I
Sbjct: 80  MQTVLMASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVI 139

Query: 117 QDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKL 176
            D+       R  + I++  +G V G L ++  N +VID S  G   Y+I     L++ +
Sbjct: 140 VDIEVFTSLLREEMLILSKEKGKVVGNLRIRSGN-DVIDLSKTGHGAYAIEPTPDLIDFI 198

Query: 177 DLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLP 236
           D+  DA +++VVEK A+FQ+L     + Q  SILIT+ G PD ATR  + RLN     LP
Sbjct: 199 DV--DAEFVLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELK-LP 255

Query: 237 ILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV-----------QL 284
           +  L D +P G  I   F+ GSI +  E+ R A  + K+LG+   D+           + 
Sbjct: 256 VYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMGDIFGNSRKKPYLSEA 315

Query: 285 IPEQSLLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHGYDYLG- 342
             +  ++  K  D++ A  + + E  + + ++EE++  +    + E+EA+   G  +L  
Sbjct: 316 ERKNYIIKAKDADIKRAEEIKNYEWFKTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAF 375

Query: 343 KYIAKKIVQADYI 355
           +YI +KI   DYI
Sbjct: 376 QYIPEKITNKDYI 388


>sp|Q971T1|TOP6A_SULTO Type 2 DNA topoisomerase 6 subunit A OS=Sulfolobus tokodaii (strain
           DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=top6A PE=3
           SV=1
          Length = 387

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 29/323 (8%)

Query: 58  RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSPEYFT------ 107
           RS    N +K F++   +    +  L  ++  T R+L+Y+    ++   P   T      
Sbjct: 68  RSFFDLNESKRFMQTVLMASIIYDALINDEYPTIRDLYYRGKHSIILKDPRGKTYEENTW 127

Query: 108 -SQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
             Q + +  I D+       R  + I++  +G V G + ++  N ++ID S  G   YSI
Sbjct: 128 DEQKESDSVIMDIEVFTSLLREDMLILSKEKGKVVGDMRIRSGN-DIIDLSKMGHGAYSI 186

Query: 167 SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
                L++ +D+  +A +++VVEK A+FQ+L     + Q  +IL+T+ G PD ATR  + 
Sbjct: 187 EPTPDLIDFVDI--NAEFVLVVEKDAVFQQLHRAGFWKQYKAILVTSAGQPDRATRRFVR 244

Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--- 282
           RLN     LP+  L D +P G  I   F+ GSI +  E+ R A  N K+LG+   D+   
Sbjct: 245 RLNEELK-LPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPNAKFLGVSMTDIFGD 303

Query: 283 ----QLIPEQS----LLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEAL 333
                 + EQ     ++  K  D++ A  + + +  + + ++ E+ + ++   + E+EA+
Sbjct: 304 SNKKPYLSEQERRNYIIKAKDADIKRATEIKNYQWFKTKAWQHEIEIFLNKKSKLEIEAM 363

Query: 334 YFHGYDYLG-KYIAKKIVQADYI 355
              G  +L  +YI +KI   DYI
Sbjct: 364 ASKGLKFLAFQYIPEKIKSKDYI 386


>sp|A2BLE8|TOP6A_HYPBU Type 2 DNA topoisomerase 6 subunit A OS=Hyperthermus butylicus
           (strain DSM 5456 / JCM 9403) GN=top6A PE=3 SV=1
          Length = 387

 Score =  111 bits (278), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 160/332 (48%), Gaps = 29/332 (8%)

Query: 49  IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK----LLCDSP- 103
           + L      RS    + +K F++   +    ++ L + +  T R+L+Y+    ++   P 
Sbjct: 59  LLLGPEKLKRSFFDLHESKKFMQTLLMARIIYEALERNEYPTIRDLYYRGKHTIVYREPG 118

Query: 104 ------EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCS 157
                   +  Q + +  I+D+       R  + I++  +G V G + ++    ++ID S
Sbjct: 119 GRRHEENTWDEQRESDAVIRDIEVFTGLLREEMLILSKEKGKVVGNMRIR-SGGDIIDLS 177

Query: 158 ACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYP 217
             G   Y+I     L+E +D+  DA Y++VVEK A+FQ+L     + +  +ILIT+ G P
Sbjct: 178 KMGHGAYAIEPTPDLIEFIDV--DAEYVLVVEKDAVFQQLHRIGFWKKHRAILITSAGQP 235

Query: 218 DIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLG 276
           D ATR  + RLN     LP+  L D +P G  I   FK GSI +  E+ R A  N +++G
Sbjct: 236 DRATRRFVRRLNEEL-GLPVYILTDADPYGWYIYSVFKIGSITLSYESERLATPNARFIG 294

Query: 277 LRGDDV-------QLIPEQS----LLPLKPRDLQIARSLMSSEILQ-ENYKEELSLMVHN 324
           +   D+         + EQ     ++  K  D++ A  L + +  Q + ++ E+ + +  
Sbjct: 295 VSMTDIFGYKSKKPYLTEQERRNFIIKAKEADIKRAYELKNYKWFQTKKWQIEIDIFLEK 354

Query: 325 GQRAEVEALYFHGYDYLG-KYIAKKIVQADYI 355
             + E+EA+   G  +L  KY+ +KI   D+I
Sbjct: 355 KAKLEIEAMTSKGLRFLADKYLPEKIETGDWI 386


>sp|Q22236|SPO11_CAEEL Meiotic recombination protein spo-11 OS=Caenorhabditis elegans
           GN=spo-11 PE=3 SV=1
          Length = 425

 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 153/328 (46%), Gaps = 33/328 (10%)

Query: 29  INRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKR 88
           I R+  N   S  L    S    SH FC R   K        R    +   + +L  +KR
Sbjct: 58  IKRQMDNKEKSLTLRISTSK---SH-FCLRYTAKRKGK--LDRDLHCLHQVYDLLENDKR 111

Query: 89  VTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQE 148
            T+REL+Y    +    + +Q  ++ +I+ +  LL+ SR +L I++  RG++ G +    
Sbjct: 112 STKRELYY----EHKAVYGNQKYLDSSIKSICELLNESRANLNILSCGRGIIRGAITFLV 167

Query: 149 PNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIP- 207
            N  VID          +  D  L    ++ ++A +I+VVEK   FQ+L ++      P 
Sbjct: 168 ENVGVIDARV----QEVLITDALLFS--NIISEADFILVVEKDTTFQKLMDENFQAMFPR 221

Query: 208 SILITAKGYPDIATRFLLHRLN--RAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEA 265
            IL T+KGYPDIATR +L  L+  R F   PI  L D +P G+ I  T+K+G      E 
Sbjct: 222 GILATSKGYPDIATRNVLKMLSEKRKF---PIYGLFDADPHGIEIYLTYKYGPTKEFAEG 278

Query: 266 Y-RYACNVKWLGLRGDDVQ--LIPEQSLLPLKPRDL-----QIARSLMSSEILQENYKEE 317
              +   ++W+GL   D     I +   LPL   D       I RS+   EI+      E
Sbjct: 279 RGAFVPTIEWIGLFPTDFHRFTIDQSQCLPLVRTDFVKIEKMIPRSIQLGEIV---VTRE 335

Query: 318 LSLMVHNGQRAEVEALYFHGYDYLGKYI 345
           L  M+ N  + E+E++   G +Y+ +++
Sbjct: 336 LDWMIQNKFKMELESINMCGQEYMARFL 363


>sp|Q57815|TOP6A_METJA Type 2 DNA topoisomerase 6 subunit A OS=Methanocaldococcus
           jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
           10045 / NBRC 100440) GN=top6A PE=1 SV=1
          Length = 369

 Score =  107 bits (268), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 151/302 (50%), Gaps = 16/302 (5%)

Query: 58  RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
           R+LT  N AK F +  K++E   Q+L  +   T RE +Y         F  Q   N  I+
Sbjct: 66  RTLT-VNQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFDDQQASNNVIE 124

Query: 118 DVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQE---VIDCSACGSSGYSISGDLSLL 173
           D+ A L   R  LG +    G  V G L + E   E   V+DC+  G+  Y+I  D++  
Sbjct: 125 DLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGAYNIPNDVT-- 182

Query: 174 EKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFP 233
            KL+L+TDA +I+ +E   +F RL  +  +++   IL++ KG P  ATR  + RL+    
Sbjct: 183 -KLNLETDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEH- 240

Query: 234 DLPILALVDWNPAG-LAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPEQSLL 291
           DLP+L   D +P G L I  T K GS      A + +    + +G+   D+ +  +    
Sbjct: 241 DLPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDI-IDYDLPTH 299

Query: 292 PLKPRDLQ-IARSLMSSEILQE--NYKEELSLMVHNGQRAEVEALYFHGYDY-LGKYIAK 347
           PLK +D++ I   L + + ++    +++ L  M+  G RAE ++L  +G  Y +  Y+ +
Sbjct: 300 PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPE 359

Query: 348 KI 349
           KI
Sbjct: 360 KI 361


>sp|Q9YE67|TOP6A_AERPE Type 2 DNA topoisomerase 6 subunit A OS=Aeropyrum pernix (strain
           ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
           GN=top6A PE=3 SV=2
          Length = 389

 Score =  103 bits (257), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 30/324 (9%)

Query: 58  RSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYK-----LLCD------SPEYF 106
           R       ++ F++   +    +Q L + +  T R+L+YK     +  D          +
Sbjct: 69  REFLNVGESRRFMQTLLMASIIYQSLIENEYPTIRDLYYKGKHTIVYRDYSGRKREENTW 128

Query: 107 TSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGYSI 166
             Q + +  IQD+       R  + I++  +G V G + ++    +VID S  G   Y+I
Sbjct: 129 DEQKESDSVIQDIEVYTGLFREDMLILSKEKGKVVGNMRIR-SGGDVIDLSKLGHGAYAI 187

Query: 167 SGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLH 226
                L+E LD+  DA +++VVEK A+FQ+L     + +  ++L+T  G PD ATR  + 
Sbjct: 188 EPTPDLIEFLDV--DAEFVLVVEKDAVFQQLHRAGFWKKYKALLVTGSGQPDRATRRFVR 245

Query: 227 RLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDV--- 282
           RL+     LP+  + D +P G  I   +K GSI +  E+ R A    K+LG++  D+   
Sbjct: 246 RLHEELK-LPVYIITDSDPYGWYIYSVYKVGSITLSYESERLATPKAKFLGVQMTDIFGY 304

Query: 283 --------QLIPEQSLLPLKPRDLQIARSLMSSEILQEN--YKEELSLMVHNGQRAEVEA 332
                   +   ++ ++    +D++ A+ L++   + +N  +  E+ L + +  + E+EA
Sbjct: 305 RGKKPYLSEAERKKFMIKATDKDIKRAKELLNYSWIGKNRRWNVEIRLFLKHLVKLEIEA 364

Query: 333 LYFHGYDYLG-KYIAKKIVQADYI 355
           +   G  +   +YI +KI   D+I
Sbjct: 365 IASKGLKFFAYQYIPEKIETGDWI 388


>sp|O27089|TOP6A_METTH Type 2 DNA topoisomerase 6 subunit A OS=Methanothermobacter
           thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
           10044 / NBRC 100330 / Delta H) GN=top6A PE=3 SV=1
          Length = 353

 Score = 92.0 bits (227), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 23/301 (7%)

Query: 51  LSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEY-FTSQ 109
           L   + TRS+      K   ++      C  ++++EK  T REL+Y  + +  E  F  Q
Sbjct: 51  LGDRYGTRSMGNVKQIKKIGQMLYTANFCKDLVAREKTATLRELYY--ISEGWEVDFADQ 108

Query: 110 LQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEPNQEVIDCSACGSSGYSISG 168
            + N   +D+   L  +R  LG++    G  V G L ++E + E ID    G SGY+IS 
Sbjct: 109 QESNIVGEDLEVTLGMTREELGLMPEEDGASVYGALTVREGDIE-IDALRSGKSGYNISP 167

Query: 169 DLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL 228
            +  +E +D   D   +I VE   +F RL ++  + +  ++++  KG    ATR  + R+
Sbjct: 168 TIDEVEFVD--HDVERVIAVETMGMFHRLVQEKAYKKFDALIVGLKGQAARATRRFIKRV 225

Query: 229 NRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQLIPE 287
           N    +LP+    D +P G  I      GS  +    ++ A  + K+LG+   D+     
Sbjct: 226 NEEL-NLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDII---- 280

Query: 288 QSLLPLKP-RDLQIARSLMSSEILQEN------YKEELSLMVHNGQRAEVEALYFHGYDY 340
              LP  P +D+ + R     E+LQ+       +K E+  M+  G++AE ++   +G +Y
Sbjct: 281 NYDLPTDPLKDVDVVR---LKELLQDPRYRGDFWKTEIKKMLTIGKKAEQQSFSKYGLEY 337

Query: 341 L 341
           +
Sbjct: 338 V 338


>sp|Q5V4R4|TOP6A_HALMA Type 2 DNA topoisomerase 6 subunit A OS=Haloarcula marismortui
           (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
           GN=top6A PE=3 SV=1
          Length = 368

 Score = 87.4 bits (215), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 19/314 (6%)

Query: 48  WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPE--- 104
           W++   +  TRS    + A+  ++    ++   Q L +++  T REL+Y  L +S +   
Sbjct: 56  WVYGDRN-STRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTLRELYY--LSESWDLDE 112

Query: 105 -YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGL-VAGRLMLQEP----NQEVIDCSA 158
             F +Q + N  I+D+  +    R    +     G  V G L+L+E     ++E+     
Sbjct: 113 AQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLREQTNRGDREIHCQDD 172

Query: 159 CGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPD 218
            G  GY I  +   +E LD   DA++++ VE   +  RL E+   ++  ++++   G P 
Sbjct: 173 VGQGGYQIPNNPDTIEFLD--NDAKFVLCVETGGMRDRLVENGFDDEYDALVVHLGGQPA 230

Query: 219 IATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGL 277
            ATR L+ RL+    DLP+    D +P    I  +  +GSI    +  Y      +++G+
Sbjct: 231 RATRRLIKRLHDEL-DLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGI 289

Query: 278 RGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFH 336
           R +D+ +  E    PL   D+    S +     Q ++ +E++ L +   ++AE +AL   
Sbjct: 290 RPEDI-VEYELPTDPLSDSDVNALESELEDPRFQTDFWEEQIELQLDINKKAEQQALASR 348

Query: 337 GYDYLGK-YIAKKI 349
           G D++ + Y+ +++
Sbjct: 349 GLDFVTETYLPERL 362


>sp|Q3IPW7|TOP6A_NATPD Type 2 DNA topoisomerase 6 subunit A OS=Natronomonas pharaonis
           (strain DSM 2160 / ATCC 35678) GN=top6A PE=3 SV=1
          Length = 368

 Score = 85.5 bits (210), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 15/312 (4%)

Query: 48  WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFY--KLLCDSPEY 105
           W++   +  TRS      A+  ++    +E     L Q +  T REL+Y  +   +    
Sbjct: 56  WVYGDRT-STRSANSVRGAQKLLKAIYTIEFLADQLEQGRSSTLRELYYLSESWDEERAQ 114

Query: 106 FTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEP---NQEVIDCSA-CG 160
           F  Q + N+ ++D+  +   +R    +     G  + G L L+E     +  I C    G
Sbjct: 115 FNDQDESNQLVEDLEIVSKVTREDFHMRPEESGATIMGPLYLREQTRRGEREIHCQKDVG 174

Query: 161 SSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIA 220
             GY I  +   +E LD   DA +++ VE   +  RL E+    +   I++  KG P  A
Sbjct: 175 EGGYQIPNNPDTIEFLD--NDADFVLCVETGGMRDRLVENGFDEEHNVIIVHLKGQPARA 232

Query: 221 TRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRG 279
           TR +  RL+    DLP++   D +P    I  +  +GSI    +  Y      +++G++ 
Sbjct: 233 TRRITKRLHDDL-DLPVVVFCDGDPWSYRIYASVAYGSIKSAHLSEYLATPEAEYIGIQP 291

Query: 280 DDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGY 338
            D+ +  +    PL   D+    S +     Q++Y +E++ L +  G++AE +AL   G 
Sbjct: 292 ADI-VEYDLPTDPLSDSDINALESELDDPRFQDDYWREQIELQLDIGKKAEQQALASRGL 350

Query: 339 DYLGK-YIAKKI 349
           D++ + Y+ +++
Sbjct: 351 DFVTETYLPERL 362


>sp|Q8U0K9|TOP6A_PYRFU Type 2 DNA topoisomerase 6 subunit A OS=Pyrococcus furiosus (strain
           ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=top6A PE=3
           SV=1
          Length = 382

 Score = 84.3 bits (207), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 9/240 (3%)

Query: 49  IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
           I L      R       A+ F++   +M    +++S+ K  + RE +Y      P     
Sbjct: 61  IKLGDKLSRRYFLNVAHARKFMQTLILMAYVKRLVSEGKHASLREAYYANKHTIPGTHEN 120

Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
            F  Q + +  I+D+  +L   R  + I A  RG V G +++++   E  + S  G  G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYVYGDIVIKDGEDE-FNASKLGMGGW 179

Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
           ++ G +  ++  ++  D  Y++VVE  A+  RL E+    +  +++I  +G      R L
Sbjct: 180 AVPGTVEHIQFPEINVD--YVLVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRRL 237

Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
           +HRL+     LPI+   D +P G  I  T K GSI +   + + A  + K++G+  DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIK 296


>sp|O59209|TOP6A_PYRHO Type 2 DNA topoisomerase 6 subunit A OS=Pyrococcus horikoshii
           (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
           / OT-3) GN=top6A PE=3 SV=2
          Length = 382

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 9/240 (3%)

Query: 49  IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
           I L      R       A+ F++   +M    +++S+ K  + RE +Y      P     
Sbjct: 61  IRLGDRLSRRYFLNVAHARKFMQTLILMAYIKRLVSEGKHASLREAYYANKHTVPGTREN 120

Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
            F  Q + +  I+D+  +L   R  + I A  RG + G +++++   E  + S  G+ G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIKDGEDE-FNASKLGTGGW 179

Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
           ++ G +  ++  ++  D  Y++VVE  A+  RL E+    +   +++  +G      R L
Sbjct: 180 AVPGTVEHIQFPEINVD--YVLVVETAAMADRLIEEKYPKRENCLIVATQGQASRGVRRL 237

Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
           +HRL+     LPI+   D +P G  I  T K GSI +   + + A  + K++G+  DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIK 296


>sp|Q5JH82|TOP6A_PYRKO Type 2 DNA topoisomerase 6 subunit A OS=Pyrococcus kodakaraensis
           (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=top6A PE=3
           SV=1
          Length = 385

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 146/323 (45%), Gaps = 22/323 (6%)

Query: 49  IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
           I +      R       A+ F++   +M    +++S+ K  + RE +Y      P     
Sbjct: 64  IKMGDKLSRRYFLNVAHARKFMQTLLIMAYVKRLVSEGKHASLREAYYANKHTIPGTREN 123

Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
            F  Q + +  I+D+  +    R  + I A  RG + G +++++   E  + S  GS G+
Sbjct: 124 TFEDQSESDPIIEDLERMFGVLREEMHITADRRGYIYGDIVIRDGEDE-FNASRLGSGGW 182

Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
           ++ G +  ++  ++  D  Y +VVE  A+  RL E+    +  +++I  +G      R L
Sbjct: 183 AVPGTVEHIQFPEINVD--YALVVETAAMADRLIEEKFPKRENALIIATQGQASRGVRRL 240

Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
           +HRL+     LPI+   D +P G  I  T K GSI +   + + A    K++G+  DD++
Sbjct: 241 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPESKFVGMTMDDIK 299

Query: 284 LIP-EQSLLPLK--PRDLQIARSLMSSEILQE-NY--------KEELSLMVHNGQRAEVE 331
               E     LK  P + +   +     IL+E NY        + +L L +  G R E +
Sbjct: 300 KYGLENVTEKLKGIPPNKKGGPTGDYKRILEEMNYPWFQNKEWQRQLQLALKWGVRIEQQ 359

Query: 332 ALYFHGYDYLGK-YIAKKIVQAD 353
           AL     +++ K Y+ +KI   D
Sbjct: 360 ALANKSLEFVAKEYLPEKINNGD 382


>sp|Q9V134|TOP6A_PYRAB Type 2 DNA topoisomerase 6 subunit A OS=Pyrococcus abyssi (strain
           GE5 / Orsay) GN=top6A PE=3 SV=1
          Length = 382

 Score = 82.8 bits (203), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 9/240 (3%)

Query: 49  IFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSP----E 104
           I L      R       A+ F +   +M    +++S+ K  + RE +Y      P     
Sbjct: 61  IKLGDKLSRRYFLNVAHARKFTQTLILMAYIKRLVSEGKHASLREAYYANKHTIPGTREN 120

Query: 105 YFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAGRLMLQEPNQEVIDCSACGSSGY 164
            F  Q + +  I+D+  +L   R  + I A  RG + G +++++   E  + S  G+ G+
Sbjct: 121 TFEDQSESDPIIEDLERMLGVLREEMHITADRRGYIYGDIVIKDGEDE-FNASKLGTGGW 179

Query: 165 SISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFL 224
           ++ G +  ++  ++  D  Y++VVE  A+  RL E+    +   +++  +G      R L
Sbjct: 180 AVPGTVEHIQFPEVNVD--YVLVVETAAMADRLIEEKYPKKENCLIVATQGQASRGVRRL 237

Query: 225 LHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGMEAYRYAC-NVKWLGLRGDDVQ 283
           +HRL+     LPI+   D +P G  I  T K GSI +   + + A  + K++G+  DD++
Sbjct: 238 IHRLHYE-EGLPIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIK 296


>sp|Q9HR32|TOP6A_HALSA Type 2 DNA topoisomerase 6 subunit A OS=Halobacterium salinarum
           (strain ATCC 700922 / JCM 11081 / NRC-1) GN=top6A PE=3
           SV=1
          Length = 366

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 153/341 (44%), Gaps = 17/341 (4%)

Query: 22  AISDLPLINRKS-SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF 80
           A  D+P ++  + S S +      DV W++   S  TRS      A+  ++    ++   
Sbjct: 28  ADGDIPRMSLPTRSKSNIEYDEDADV-WVY-GDSQSTRSANSVRGARKLLKSVYTVDFLA 85

Query: 81  QILSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG 138
           Q L + +  T REL+Y  +   ++   F  Q + ++ ++D+  +    R    +     G
Sbjct: 86  QQLDEGRSSTLRELYYLSESWDEAEAQFNDQSESDKLVEDLEIVSGVKREDFHMRPEESG 145

Query: 139 L-VAGRLMLQEP----NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
             V G L L+E     ++E+      G  GY I  +   ++ LD  TDA +++ VE   +
Sbjct: 146 AKVMGPLRLREQTRRGDREIHCQEDVGQGGYQIPNNPDTIDFLD--TDADFVLCVETGGM 203

Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
             RL E+   +   +I++   G P  ATR L  RL+    DLP+    D +P    I  +
Sbjct: 204 RDRLVENGFDDDYNAIVVHLGGQPARATRRLTKRLHDEL-DLPVTVFTDGDPWSYRIYGS 262

Query: 254 FKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQE 312
             +GSI    +  Y      +++G+R  D+ +  +    PL   D+    S +     Q 
Sbjct: 263 VAYGSIKSAHLSEYLATPQAQFIGIRPQDI-VDYDLPTDPLSDSDVNALESELEDPRFQS 321

Query: 313 NY-KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQ 351
           ++  E++ L +   ++AE +AL   G D++   Y+ +++ +
Sbjct: 322 DFWTEQIGLQLDIDKKAEQQALASRGLDFVTDTYLPERLAE 362


>sp|B0R4D2|TOP6A_HALS3 Type 2 DNA topoisomerase 6 subunit A OS=Halobacterium salinarum
           (strain ATCC 29341 / DSM 671 / R1) GN=top6A PE=3 SV=1
          Length = 366

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 153/341 (44%), Gaps = 17/341 (4%)

Query: 22  AISDLPLINRKS-SNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCF 80
           A  D+P ++  + S S +      DV W++   S  TRS      A+  ++    ++   
Sbjct: 28  ADGDIPRMSLPTRSKSNIEYDEDADV-WVY-GDSQSTRSANSVRGARKLLKSVYTVDFLA 85

Query: 81  QILSQEKRVTQRELFY--KLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG 138
           Q L + +  T REL+Y  +   ++   F  Q + ++ ++D+  +    R    +     G
Sbjct: 86  QQLDEGRSSTLRELYYLSESWDEAEAQFNDQSESDKLVEDLEIVSGVKREDFHMRPEESG 145

Query: 139 L-VAGRLMLQEP----NQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAI 193
             V G L L+E     ++E+      G  GY I  +   ++ LD  TDA +++ VE   +
Sbjct: 146 AKVMGPLRLREQTRRGDREIHCQEDVGQGGYQIPNNPDTIDFLD--TDADFVLCVETGGM 203

Query: 194 FQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPAGLAILCT 253
             RL E+   +   +I++   G P  ATR L  RL+    DLP+    D +P    I  +
Sbjct: 204 RDRLVENGFDDDYNAIVVHLGGQPARATRRLTKRLHDEL-DLPVTVFTDGDPWSYRIYGS 262

Query: 254 FKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQE 312
             +GSI    +  Y      +++G+R  D+ +  +    PL   D+    S +     Q 
Sbjct: 263 VAYGSIKSAHLSEYLATPQAQFIGIRPQDI-VDYDLPTDPLSDSDVNALESELEDPRFQS 321

Query: 313 NY-KEELSLMVHNGQRAEVEALYFHGYDYL-GKYIAKKIVQ 351
           ++  E++ L +   ++AE +AL   G D++   Y+ +++ +
Sbjct: 322 DFWTEQIGLQLDIDKKAEQQALASRGLDFVTDTYLPERLAE 362


>sp|C4VB43|SPO11_NOSCE Probable meiosis-specific protein SPO11 homolog OS=Nosema ceranae
           (strain BRL01) GN=SPO11 PE=3 SV=1
          Length = 271

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 40/270 (14%)

Query: 83  LSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRGLVAG 142
           L+  K   +RE++Y    +S   F  Q  V+  I+D    L C++  L I  + +G+  G
Sbjct: 40  LTLNKIKNKREIYY----NSVSIFKKQSIVDMLIKDTCNKLKCTQSDLLISTTLKGVFYG 95

Query: 143 RLMLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFV 202
            +   + N+ V         G S+  D++ +++++     +  +++EK  IF +   +++
Sbjct: 96  NITFYKNNKLV----HVNLKGTSLIPDMNQIDRIEY--TQKKCLIIEKDTIFSKTVREYI 149

Query: 203 FNQIPSILITAKGYPDIATRFLLHRLN-RAFPDLPILALVDWNPAGLAILCTFKFGSIGM 261
            N I  + I  KGYP   T  L+++LN R +       + D++P GL I CT K+ SI  
Sbjct: 150 SNDI--LFICGKGYPCRNTLLLVNKLNIRKY------GIFDFDPYGLEI-CT-KYPSI-- 197

Query: 262 GMEAYRYACNVKWLGLRGDDVQLIPEQSLLPLKPRDLQIARSLMSSEILQENYKEELSLM 321
                      K +G+   D+ LI +Q  + L   D++   +L+  ++    Y+ EL  M
Sbjct: 198 -----------KKIGIDIKDINLIDKQHFMILNKYDIRKINTLLKQKV----YEIELFYM 242

Query: 322 VHNGQRAEVEALY-FHGYDYLGKYIAKKIV 350
           + N  + E+E L+   G+D +  Y   KI+
Sbjct: 243 LKNNIKIEIEGLFSAKGFD-INNYFYTKII 271


>sp|Q468I6|TOP6A_METBF Type 2 DNA topoisomerase 6 subunit A OS=Methanosarcina barkeri
           (strain Fusaro / DSM 804) GN=top6A PE=3 SV=1
          Length = 369

 Score = 74.7 bits (182), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 20/292 (6%)

Query: 65  AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEYFTSQLQVNRTIQ 117
           +AK     +++++T +       + L+Q +  T REL+Y         F  Q + +R I+
Sbjct: 68  SAKTVKGAFQLLKTTYATEFLINEHLAQSRGSTLRELYYISEGWEAAKFKEQAESDRLIE 127

Query: 118 DVIALLHCSRFSLGIVASSRGLVA-GRLMLQEP---NQEVIDCSA-CGSSGYSISGDLSL 172
           D+  L +  R    +     G    G + + E     +  I C    G  GY I  ++  
Sbjct: 128 DLELLTNLQREYFHMRPEEDGATMFGPIEITEQTNRGERNIHCQKDVGEGGYQIPFNV-- 185

Query: 173 LEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRA 231
            E ++ K  DA  II +E   ++ RL E+       +IL+  KG P  +TR ++ R+N  
Sbjct: 186 -ENIEFKAHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEE 244

Query: 232 FPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQSL 290
              +P+    D +P    I  +  +G+I    +  +      K+LGL+  D+ +  E S 
Sbjct: 245 L-GIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDI-VEYELST 302

Query: 291 LPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
             L  +D+   RS +S    + +Y KE++ L +  G++AE +A    G +++
Sbjct: 303 DKLTEQDINALRSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLNFV 354


>sp|Q8PUB7|TOP6A_METMA Type 2 DNA topoisomerase 6 subunit A OS=Methanosarcina mazei
           (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
           / OCM 88) GN=top6A PE=1 SV=1
          Length = 369

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 22/293 (7%)

Query: 65  AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEY--FTSQLQVNRT 115
           +AK     +++++T +       + L++ +  T REL+Y  + +  +Y  F  Q + +R 
Sbjct: 68  SAKTVKGAFQLLKTTYATDFLINEHLARNRGSTLRELYY--ISEGWDYAKFKEQGESDRL 125

Query: 116 IQDVIALLHCSRFSLGIVASSRGLVA-GRLMLQEP---NQEVIDCSA-CGSSGYSISGDL 170
           I+D+  L    R    +     G    G + + E     +  I C    G  GY I  ++
Sbjct: 126 IEDLEILTSLQREYFHMRPEEDGATMFGPIEITEQTKRGERNIHCQKDVGEGGYQIPFNV 185

Query: 171 SLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNR 230
             +E    K DA  II +E   ++ RL E+       +IL+  KG P  +TR ++ R+N 
Sbjct: 186 ENIEFQ--KHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNE 243

Query: 231 AFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQS 289
               +P+    D +P    I  +  +G+I    +  +      K+LGL+  D+ +  E S
Sbjct: 244 EL-GIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDI-VEYELS 301

Query: 290 LLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
              L  +D+   RS +S    + +Y KE++ L +  G++AE +A    G D++
Sbjct: 302 TDKLTEQDVSALRSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFV 354


>sp|Q8TQF8|TOP6A_METAC Type 2 DNA topoisomerase 6 subunit A OS=Methanosarcina acetivorans
           (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
           GN=top6A PE=3 SV=2
          Length = 373

 Score = 72.0 bits (175), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 24/294 (8%)

Query: 65  AAKAFVRVWKVMETCF-------QILSQEKRVTQRELFYKLLCDSPEY--FTSQLQVNRT 115
           +AK     +++++T +       + L+  +  T REL+Y  + +  +Y  F  Q + +R 
Sbjct: 72  SAKTVKGAFQLLKTTYATDFLINEHLAHNRGSTLRELYY--ISEGWDYAKFKEQAESDRL 129

Query: 116 IQDVIALLHCSRFSLGIVASSRGLVA-GRLMLQEPNQEV---IDCSA-CGSSGYSISGDL 170
           I+D+  L    R    +     G    G + + E  +     I C    G  GY I  ++
Sbjct: 130 IEDLELLTSLQREYFHMRPEEDGATMFGPIEISELTKRGARNIHCQKDVGEGGYQIPFNV 189

Query: 171 SLLEKLDLKT-DARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLN 229
              E ++ K  DA  II +E   ++ RL E+       +IL+  KG P  +TR ++ R+N
Sbjct: 190 ---ENIEFKNHDASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMN 246

Query: 230 RAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDDVQLIPEQ 288
               ++P+    D +P    I  +  +G+I    +  +      ++LGL+  D+ +  E 
Sbjct: 247 EEL-EIPVAVFTDGDPWSYRIYASVAYGAIKSAHLSEFMATPAARFLGLQPSDI-VEYEL 304

Query: 289 SLLPLKPRDLQIARSLMSSEILQENY-KEELSLMVHNGQRAEVEALYFHGYDYL 341
           S   L  +D+   RS +S    +  Y KE++ L +  G++AE +A    G D++
Sbjct: 305 STDKLTEQDISALRSELSDPRFESEYWKEQIQLQLDIGKKAEQQAFAGKGLDFV 358


>sp|O29322|TOP6A_ARCFU Type 2 DNA topoisomerase 6 subunit A OS=Archaeoglobus fulgidus
           (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
           100126) GN=top6A PE=3 SV=1
          Length = 360

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 18/304 (5%)

Query: 48  WIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRVTQRELFYKLLCDSPEYFT 107
           W++       RS      A   +++  V+    + L+  K  T REL+Y         F 
Sbjct: 50  WVYGDRK-SVRSAKTVKGAYRILKMTYVIGFLKEQLNLNKSSTLRELYYISEGWGAAKFE 108

Query: 108 SQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSAC----GSS 162
            Q + +R ++D+  L +  R    I     G  V G L ++E  +  +    C    G  
Sbjct: 109 EQPESDRLVEDLEILTNFQREHFHIRPEEDGATVIGPLRVREETRRGVREIHCQDDVGEG 168

Query: 163 GYSISGDLSLLEKLDLKTDARYIIVVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATR 222
           GY I  ++  +E +D   DA+++I +E   +  RL E+    +  +I++  KG P  +TR
Sbjct: 169 GYQIPVNVDKIEFVD--HDAKFVIAIETGGMRDRLVENGFDEKYDAIIVHLKGQPARSTR 226

Query: 223 FLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSIGMG-MEAYRYACNVKWLGLRGDD 281
            LL RLN    +LP++   D +P    I  +  +GSI    +  Y      +++G+R  D
Sbjct: 227 RLLRRLNTEL-NLPVVVFTDGDPWSYRIFASVAYGSIKSAHLSEYLATPAAQFVGIRPTD 285

Query: 282 VQLIPEQSLLP---LKPRDLQIARSLMSSEILQ-ENYKEELSLMVHNGQRAEVEALYFHG 337
           +     +  LP   L   D++   ++++      E +K+E++L +   +++E +AL  +G
Sbjct: 286 IV----KYDLPADKLTEEDIKALNAILTDPRFDSEFWKKEVNLQLEINKKSEQQALAKYG 341

Query: 338 YDYL 341
            DY+
Sbjct: 342 LDYV 345


>sp|Q8SVS9|SPO11_ENCCU Probable meiosis-specific protein SPO11 homolog OS=Encephalitozoon
           cuniculi (strain GB-M1) GN=SPO11 PE=3 SV=1
          Length = 303

 Score = 56.2 bits (134), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)

Query: 62  KSNAAKAFVRVWKVMETCFQILSQEKRVT--QRELFYKLLCDSPEYFTSQLQVNRTIQDV 119
           KS      +R+++++     I  QE  +T  +RE+FY         F +Q  V R +  +
Sbjct: 26  KSRTLATRLRLYEII-----IEMQELGITRNEREIFYM----DVNVFRTQSVVRRLVSSI 76

Query: 120 IALLHCSRFSLGIVASSRGLVAGRL-MLQEPNQEVIDCSACGSSGYSISGDLSLLEKLDL 178
            + L  S+  LG+  + +G+  GRL  ++     +++ S+ G     I     + E L  
Sbjct: 77  ASELQISKHDLGVRNTLKGIFIGRLGFVRHHGLGMVEMSSKGGCPQLIPDMSDIAEVL-- 134

Query: 179 KTDARYIIVVEKHAIFQRLTEDFVFNQ-IPSIL-ITAKGYPDIATRFLLHRLNRAFPDLP 236
             D +  +VVEK  + QR+  +    + +  IL +  KGYP   T  LL  +        
Sbjct: 135 -CDYKKTVVVEKDTVLQRIASEIEREKCLEEILFVCGKGYPCKNTVLLLKMIEHK---TA 190

Query: 237 ILALVDWNPAGLAILCTFKFGS 258
           +  L D +P G+ I C +K+GS
Sbjct: 191 VAGLFDLDPFGIHIFCIYKYGS 212


>sp|P23179|SPO11_YEAST Meiosis-specific protein SPO11 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=SPO11 PE=1 SV=1
          Length = 398

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 117/304 (38%), Gaps = 47/304 (15%)

Query: 30  NRKSSNSRVSQGLLTDVSWIFLSHSFCTRSLTKSNAAKAFVRVWKVMETCFQILSQEKRV 89
           N+K      S  + T + +       CT        A     +  VME     L   K  
Sbjct: 73  NKKKKGDTSSPDIHTTLDFPLNGPHLCTHQFKLKRCAILLNLLKVVMEK----LPLGKNT 128

Query: 90  TQRELFYKLLCDSPEYFTSQLQVNRTIQDVIALLH--CSRFSLGIVASSRGLVAGRLML- 146
           T R++FY     + E F  Q  V + + DVI        R SL I+ + +GLV     + 
Sbjct: 129 TVRDIFY----SNVELFQRQANVVQWL-DVIRFNFKLSPRKSLNIIPAQKGLVYSPFPID 183

Query: 147 ---------QEPN---QEVIDCSACGSSGYSISGDLSLLEKLDLKTDARYIIVVEKHAIF 194
                     EP    Q +     C    +     + L       T    I++VEK A+F
Sbjct: 184 IYDNILTCENEPKMQKQTIFPGKPCLIPFFQDDAVIKLGT-----TSMCNIVIVEKEAVF 238

Query: 195 QRLTEDFVFNQIPSILITAKGYPDIATRFLLHRL----NRAFPDLPILALVDWNPAGLAI 250
            +L  ++      ++LIT KG+PD  TR  L +L    ++   D  I    D +P G++I
Sbjct: 239 TKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCSIFT--DADPYGISI 296

Query: 251 LCTFKFGSIGMGMEAYRYACNV-KWLGLRGDDVQLIPEQ------SLLPLKPRDLQIARS 303
              +   +     E   Y C +  + G+R   V     +       LL L  RD  +A++
Sbjct: 297 ALNYTHSN-----ERNAYICTMANYKGIRITQVLAQNNEVHNKSIQLLSLNQRDYSLAKN 351

Query: 304 LMSS 307
           L++S
Sbjct: 352 LIAS 355


>sp|Q5QW45|XGPT_IDILO Xanthine phosphoribosyltransferase OS=Idiomarina loihiensis (strain
           ATCC BAA-735 / DSM 15497 / L2-TR) GN=gpt PE=3 SV=1
          Length = 161

 Score = 33.5 bits (75), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 104 EYFTSQLQVNRTIQDVIALLHCSRFSLGIVASSRG-LVAGRLMLQEPNQEVIDCSACGSS 162
           E+F S  +++R  +++      +    GI+A SRG LV   ++ +E N  V+DC A  S 
Sbjct: 8   EFFVSWEELHRATRELARRQLPAEQYKGIIAVSRGGLVPAAIVSRELNIRVVDCVAVSSY 67

Query: 163 GYSIS-GDLSLLEKLDLKTDARYIIVVE 189
            ++    DL +++ +    D    +VV+
Sbjct: 68  DHTEQRDDLQVMKDVTATEDGEGFLVVD 95


>sp|B0TZM4|GLMU_FRAP2 Bifunctional protein GlmU OS=Francisella philomiragia subsp.
           philomiragia (strain ATCC 25017) GN=glmU PE=3 SV=1
          Length = 451

 Score = 33.5 bits (75), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 166 ISGDLSLLEKLDLKTDARYIIVVEK------HAIFQRLTEDFVFNQIPSILITAKGYPDI 219
           ++G L  + + DL  D +   V +K      HA+ Q L     + +   +LI     P I
Sbjct: 51  VTGHLKEMVEADL-ADKKVTFVEQKEQLGTGHAVLQALP----YIKEDKVLILYGDVPLI 105

Query: 220 ATRFLLHRLNRAFPDLPILALVDWNPAGLAILCTFKFGSI 259
           +T  L + +  A  DL +L  +  NP GL  +   KFG++
Sbjct: 106 STDVLANLIKSASDDLAVLTAIVDNPTGLGRIIRDKFGAV 145


>sp|Q80YE7|DAPK1_MOUSE Death-associated protein kinase 1 OS=Mus musculus GN=Dapk1 PE=1 SV=3
          Length = 1442

 Score = 32.7 bits (73), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 187  VVEKHAIFQRLTEDFVFNQIPSILITAKGYPDIATRFLLHRLNRAFPDLPILALVDWNPA 246
            +V KH +  R + DF+ + + ++L     YP+     L+ +L         L   D    
Sbjct: 1339 MVAKHNVNNRASRDFLPSPVHALLQEWTSYPESTVGILISKLRE-------LGRRDAADF 1391

Query: 247  GLAILCTFKFGSIGMGMEAYRYACN 271
             L     FK    G G EAY  +CN
Sbjct: 1392 LLKASSVFKINLDGNGQEAYASSCN 1416


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.138    0.406 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,886,757
Number of Sequences: 539616
Number of extensions: 4821907
Number of successful extensions: 11116
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11034
Number of HSP's gapped (non-prelim): 31
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)